View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2071_low_98 (Length: 237)
Name: NF2071_low_98
Description: NF2071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2071_low_98 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 2655886 - 2656094
Alignment:
| Q |
18 |
attactgaagaaggtgtctcaacctcaacagaaccttcatcatctgaaccactacacaatgcataaaaaatgctacccgaataagagttgtcactagtcc |
117 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2655886 |
attactgaagaaggtgtctcaacctcaacagaatcttcatcatctgaaccactacacaatgcataaaaaatgctacccgaataagagttgtcactagtcc |
2655985 |
T |
|
| Q |
118 |
tacttgaaatttctatctttttcctttcctgaattgtggccattttcttctgatttggactcagataaatggaacctcttctagtttctatattctcttc |
217 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
2655986 |
tacttgaaatttctatctttttcctttcctgaattgtggccattttcttctgatttggactcagataaatggaacctcttctagtttctatattctcttc |
2656085 |
T |
|
| Q |
218 |
tagcctatg |
226 |
Q |
| |
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||| ||||| |
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|
| T |
2656086 |
tagtctatg |
2656094 |
T |
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