View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2100-Insertion-1 (Length: 1141)
Name: NF2100-Insertion-1
Description: NF2100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2100-Insertion-1 |
 | |
|
| [»] scaffold0627 (3 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 971; Significance: 0; HSPs: 41)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 971; E-Value: 0
Query Start/End: Original strand, 6 - 1065
Target Start/End: Complemental strand, 8548171 - 8547116
Alignment:
| Q |
6 |
caccctcttcaaagtgttttaccggcaaacacaaagcatgacgccgcggagaaggattggtcaaagtatcaatgtggtaaaccttagtccatgactctcc |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8548171 |
caccctcttcaaagtgttttaccggcaaacacaaagcatgacgccgcggagaaggattggtcaaagtatcaatgtggtaaatcttagtccatgactctcc |
8548072 |
T |
|
| Q |
106 |
aatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtctt |
205 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8548071 |
a------tattcgttcataacccacattgtaacataagagagatagttccagtcacaaatgtaaagacatccctttaattctcccaagctaatacgtctt |
8547978 |
T |
|
| Q |
206 |
ctcgcaccacgaacttcggtattatgattttcaaacacagatgaaggagagggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagacc |
305 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547977 |
ctcacaccacgaacttcggtattatgattttcaaacacagatgaaggagaaggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagacc |
8547878 |
T |
|
| Q |
306 |
ctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccacttatttctccat |
405 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547877 |
ctcccctttccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccacttatttctccat |
8547778 |
T |
|
| Q |
406 |
gttggtgttccgagtgtgtgtatctcaacaattaccacacgctcaatctcacatgcataatcacatattgcacgtctagcgtatttcttccaaatattta |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8547777 |
gttggtgttccgagtgtgtgtatctcaacaattaccacacgctcaatctcacatgcataatcacatattgcacgtctagcatatttcttccaaatattta |
8547678 |
T |
|
| Q |
506 |
tcactttatattcattagttttaggatagaaaccacaaccagctgcttcttgatttaaaacataatctgtgtcatttggcatacgaatcgtagtagcttc |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8547677 |
tcactttatattcattagttttaggatagaaaccacaaccagctgcttcttgatttaaaatataagctgtgtcatttggcatacgaatcgtagtagcttc |
8547578 |
T |
|
| Q |
606 |
aagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcaca |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547577 |
aagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcaca |
8547478 |
T |
|
| Q |
706 |
atatcaaaatgatcacgatctctgttgcaagcaatataagggcgcttggatttattcttgatcccgtcacttttctccctaaatgatttgatataaccac |
805 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547477 |
atatcaaaatgatcacgatctctgttgcaagcaatataagggcgcttggatttattcttgatcctgtcacttttctccctaaatgatttgatataaccac |
8547378 |
T |
|
| Q |
806 |
gaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttca-gctcacactcaagatggtacatggttcttgacac |
904 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8547377 |
gaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatcttgaacttttcaggctcacactcaagatggtacatggttcttgacac |
8547278 |
T |
|
| Q |
905 |
tagtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttg |
1004 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547277 |
tagtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttg |
8547178 |
T |
|
| Q |
1005 |
caaacacatttacaaatgagaagagacttgatgtgaagttt-agcagaatgtgggcagtgag |
1065 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8547177 |
caaacacatttacaaatgagaagagacttgatgtgaagtttaagcagaatgtgggcagtgag |
8547116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 804 - 1033
Target Start/End: Original strand, 8637749 - 8637979
Alignment:
| Q |
804 |
acgaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttca-gctcacactcaagatggtacatggttcttgac |
902 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
8637749 |
acgaagaggaagcttaaatataggcgcaagcttcacatgattgttgcttccaatctcaaacttttcatgatcacactcaagaaggtacatggttcttgac |
8637848 |
T |
|
| Q |
903 |
actagtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatct |
1002 |
Q |
| |
|
||||||||| | |||| ||||| |||||| |||| || | | || |||||| |||||||||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
8637849 |
actagtctaccatcatttgtccgaatcatgagactaaggggcgctcgctcaaattgcaatttagcaaaatgtggttccgaaatcattgttttccaaatct |
8637948 |
T |
|
| Q |
1003 |
tgcaaacacatttacaaatgagaagagactt |
1033 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |
|
|
| T |
8637949 |
tgcacacacatttacaaatgagaagagactt |
8637979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 804 - 1030
Target Start/End: Original strand, 8645094 - 8645321
Alignment:
| Q |
804 |
acgaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagc-tcacactcaagatggtacatggttcttgac |
902 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||| || ||||||||||||| | |||||||||| |||||||||||| ||||||| ||||||||| |
|
|
| T |
8645094 |
acgaagaggaagcttaaatataggtgcaagcttgacacgactgttgcttccaatttgaaacttttcaggatcacactcaagaaggtacatagttcttgac |
8645193 |
T |
|
| Q |
903 |
actagtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatct |
1002 |
Q |
| |
|
||||||||| ||||||| ||| |||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
8645194 |
actagtctacagtcatctatccgaatcatgagacaaacttgtgatcgctcaaagttcaatttagcaaaatgtggttctgaaataagtgttttccaaatct |
8645293 |
T |
|
| Q |
1003 |
tgcaaacacatttacaaatgagaagaga |
1030 |
Q |
| |
|
|||| ||||||| ||||||||||||||| |
|
|
| T |
8645294 |
tgcacacacattcacaaatgagaagaga |
8645321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 808 - 1035
Target Start/End: Complemental strand, 9073970 - 9073742
Alignment:
| Q |
808 |
agaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttca-gctcacactcaagatggtacatggttcttgacacta |
906 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||| |||||| |
|
|
| T |
9073970 |
agaggaagcttgaatataggctcaagcttgacatgtttgttgcttccaatctcaaacttttcaggttcacactcaagaaggtacatggttctcgacactc |
9073871 |
T |
|
| Q |
907 |
gtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgca |
1006 |
Q |
| |
|
|||||||| |||| |||||| | || || | ||| || |||||| |||||||||||||||||| |||||||||||| | |||||||||| ||||| |
|
|
| T |
9073870 |
taatatcgtcaagggtccgaatcataaaactaagtggtgctcgctcaaattgcaatttagcaaaatgtggttctgaaataagtcttttccaaattttgca |
9073771 |
T |
|
| Q |
1007 |
aacacatttacaaatgagaagagacttga |
1035 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
9073770 |
cacacatttacaaatgagaagaggcttga |
9073742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 743 - 1074
Target Start/End: Complemental strand, 1599591 - 1599269
Alignment:
| Q |
743 |
aagggcgcttggatttattcttgatcccgtcacttttctccctaaatgatttgatataaccacgaagaggaagcttgaatataggatcaagcttcacatg |
842 |
Q |
| |
|
||||||||||||||| ||| |||||| |||||||||| |||||||||||| ||| ||||||||||||| ||||| ||||||||||| | |
|
|
| T |
1599591 |
aagggcgcttggattcattattgatctcgtcacttttatccctaaatgatctga------------gaggaagcttgaacataggcgcaagcttcacacg |
1599504 |
T |
|
| Q |
843 |
attgttgcttccaatctcgaacttttcagct-cacactcaagatggtacatggttcttgacactagtctatcgtcatctgtccaaatcattagacaaact |
941 |
Q |
| |
|
|| ||||||||||||||| |||||||||| | ||||||||||| |||||| ||||||||| ||| | || ||||| |||| |||||| |||| || | |
|
|
| T |
1599503 |
atcgttgcttccaatctcaaacttttcaggttcacactcaagaaggtacaaggttcttgatactcggtaatagtcattggtccgaatcatgagactaagt |
1599404 |
T |
|
| Q |
942 |
tgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgcaaacacatttacaaatgagaagagacttgatgtgaa |
1041 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||||||||| | |||||||||||| ||||| ||| |||||||||||||||| ||||| || ||| |
|
|
| T |
1599403 |
ggtgatcgctcaaagtgcgatttagcaaaatgtgattctgaaatcaatgttttccaaattttgcacacagatttacaaatgagaagcgacttaataggaa |
1599304 |
T |
|
| Q |
1042 |
gtt-tagcagaatgtgggcagtga-gtgagatgaa |
1074 |
Q |
| |
|
||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
1599303 |
gttgaagcagaatgcgggcagtgacgtgagatgaa |
1599269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 890 - 1030
Target Start/End: Original strand, 8678689 - 8678829
Alignment:
| Q |
890 |
catggttcttgacactagtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataatt |
989 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| | |
|
|
| T |
8678689 |
catggttcttgacactagtctacagtcatctatccgaatcatgagacaaacttgtgatcgctcaaagttcaatttagcaaaatgtggttctgaaataagt |
8678788 |
T |
|
| Q |
990 |
gttttccaaatcttgcaaacacatttacaaatgagaagaga |
1030 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8678789 |
gttttccaaatcttgcacacacatttacaaatgagaagaga |
8678829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 593 - 744
Target Start/End: Complemental strand, 9074245 - 9074094
Alignment:
| Q |
593 |
tcgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccact |
692 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| || ||| | |
|
|
| T |
9074245 |
tcgtggtagcttcaggaagtcttatgaactcccctgtgactgggttgcagatcactgaagggtttccggtagttggttcagacaaacaaagtaaaccatt |
9074146 |
T |
|
| Q |
693 |
gcaagaattcacaatatcaaaatgatcacgatctctgttgcaagcaatataa |
744 |
Q |
| |
|
||||||||||||||||||||| | |||| || | ||||||||||| ||||| |
|
|
| T |
9074145 |
gcaagaattcacaatatcaaacttatcataatatttgttgcaagcagtataa |
9074094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 8535602 - 8535737
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgta |
168 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| ||| || |||| ||||||||||| |
|
|
| T |
8535602 |
aagtatcaatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacatcagataaaaaggtcgaatcacaaatgta |
8535701 |
T |
|
| Q |
169 |
aagacatccctttaattctcccaagctaatacgtct |
204 |
Q |
| |
|
|||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
8535702 |
aagaaatccctttaattctcccatgctaatatgtct |
8535737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 807 - 1058
Target Start/End: Complemental strand, 2844329 - 2844076
Alignment:
| Q |
807 |
aagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagc-tcacactcaagatggtacatggttcttgacact |
905 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||| | | ||||||||||| |
|
|
| T |
2844329 |
aagaggaagctcgaatatagggtcaagcttcacatgatttttgcttccaatctcaaacttttcagcttcacactcaagaaggtataggtttcttgacact |
2844230 |
T |
|
| Q |
906 |
agtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgc |
1005 |
Q |
| |
|
| ||| ||| | | ||||| | || |||| ||| || |||||| |||||||||||||||||| ||||||| |||| ||| |||||||| |||| |
|
|
| T |
2844229 |
cctatattgtctaaatttcgaatcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgatataagtgtattccaaattttgc |
2844130 |
T |
|
| Q |
1006 |
aaacacatttacaaatgagaagagacttgatgtgaag-tttagcagaatgtggg |
1058 |
Q |
| |
|
| |||||| |||| |||||||||||||| ||| |||| ||||| |||||||||| |
|
|
| T |
2844129 |
acacacatctacatatgagaagagacttaatgggaagctttaggagaatgtggg |
2844076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 807 - 1058
Target Start/End: Complemental strand, 2856162 - 2855909
Alignment:
| Q |
807 |
aagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagc-tcacactcaagatggtacatggttcttgacact |
905 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||| | | ||||||||||| |
|
|
| T |
2856162 |
aagaggaagctcgaatatagggtcaagcttcacatgatttttgcttccaatctcaaacttttcagcttcacactcaagaaggtataggtttcttgacact |
2856063 |
T |
|
| Q |
906 |
agtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgc |
1005 |
Q |
| |
|
| ||| ||| | | ||||| | || |||| ||| || |||||| |||||||||||||||||| ||||||| |||| ||| |||||||| |||| |
|
|
| T |
2856062 |
cctatattgtctaaatttcgaatcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgatataagtgtattccaaattttgc |
2855963 |
T |
|
| Q |
1006 |
aaacacatttacaaatgagaagagacttgatgtgaag-tttagcagaatgtggg |
1058 |
Q |
| |
|
| |||||| |||| |||||||||||||| ||| |||| ||||| |||||||||| |
|
|
| T |
2855962 |
acacacatctacatatgagaagagacttaatgggaagctttaggagaatgtggg |
2855909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 807 - 1044
Target Start/End: Complemental strand, 2873775 - 2873537
Alignment:
| Q |
807 |
aagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagc-tcacactcaagatggtacatggttcttgacact |
905 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||| | | ||||||||||| |
|
|
| T |
2873775 |
aagaggaagctcgaatatagggtcaagcttcacatgattgttgcttccaatctcaaacttttcagcttcgcactcaagaaggtataggtttcttgacact |
2873676 |
T |
|
| Q |
906 |
agtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgc |
1005 |
Q |
| |
|
| ||| ||| | | ||||| | || |||| ||| || |||||| |||||||||||||||||| |||||||||||| ||| |||||| | |||| |
|
|
| T |
2873675 |
cctatattgtctaaatttcgaatcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgaaataagtgtattccaagttttgc |
2873576 |
T |
|
| Q |
1006 |
aaacacatttacaaatgagaagagacttgatgtgaagtt |
1044 |
Q |
| |
|
| |||||| |||| |||||||||||||| ||| |||||| |
|
|
| T |
2873575 |
acacacatctacacatgagaagagacttaatgggaagtt |
2873537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 808 - 1033
Target Start/End: Original strand, 8529805 - 8530025
Alignment:
| Q |
808 |
agaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttca-gctcacactcaagatggtacatggttcttgacacta |
906 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| |||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
8529805 |
agaggaagcttgaatataggtgcaagcttgacatgattgttgcttccaatctcaaacttatcaggctcgcactcaagaaggtacagggttcttgacactc |
8529904 |
T |
|
| Q |
907 |
gtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgca |
1006 |
Q |
| |
|
| | ||| || | |||||| |||| || | |||||| |||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||| |
|
|
| T |
8529905 |
g-gtgtcg-----cgttcgaatcatgagactaattggtgatcgctcaaagtgcgatttagcaaattgtgattctgaaataattgttttccaaactttgca |
8529998 |
T |
|
| Q |
1007 |
aacacatttacaaatgagaagagactt |
1033 |
Q |
| |
|
||||||||||||||||||| |||||| |
|
|
| T |
8529999 |
cacacatttacaaatgagaacagactt |
8530025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 69 - 433
Target Start/End: Original strand, 8529044 - 8529403
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgta |
168 |
Q |
| |
|
||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| | | || ||| ||||||||||| |
|
|
| T |
8529044 |
aagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatgta |
8529143 |
T |
|
| Q |
169 |
aagacatccctttaattctcccaagctaatacgtcttctcgcaccacgaacttcggtattatgattttcaaacacagatgaaggagagggaaatgattga |
268 |
Q |
| |
|
||| |||||||||||||||||| ||||||| | || | || | ||| |||||||||| |||||||| || |||||| ||||| || || |
|
|
| T |
8529144 |
tagaaatccctttaattctcccatgctaataggcctac---aacaaaaaac------attatgatttccaaacacatgtggaggagaaggaaacgactgc |
8529234 |
T |
|
| Q |
269 |
aacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagat |
368 |
Q |
| |
|
|||||||| ||||||| || ||| |||||| |||| | | ||| ||||| |||||||||||||||| ||||||||||||||||||| | ||| |
|
|
| T |
8529235 |
aacctctcattttcaaagcagaaaaccaatattgacctttgctgaccctcaaatcttatccaatgaagtgcaccattcacacaagtgggatactttagac |
8529334 |
T |
|
| Q |
369 |
aagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
433 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||| | || |||||| ||||||| |||||||| |
|
|
| T |
8529335 |
tcgaaaaagaaatttgaggatccacttcaacatttctccaggatgttgttccaagtgtgtttatctcaa |
8529403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 808 - 1033
Target Start/End: Original strand, 8536369 - 8536595
Alignment:
| Q |
808 |
agaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagc-tcacactcaagatggtacatggttcttgacacta |
906 |
Q |
| |
|
|||||||||||||| ||||| |||| |||||||||| ||||||||||||||| ||||||| || ||| |||||||| ||||||| |||||||| ||| |
|
|
| T |
8536369 |
agaggaagcttgaacataggcacaagtttcacatgatcgttgcttccaatctcaaacttttgaggatcagactcaagaaggtacattgttcttgaaactc |
8536468 |
T |
|
| Q |
907 |
gtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgca |
1006 |
Q |
| |
|
| |||| ||||| |||| |||||| |||| | | ||||| ||||||||| |||||||||||||| ||||||||| | |||||||||||| ||||| |
|
|
| T |
8536469 |
ggctatagtcattggtccgaatcatgagactgagtggtgattgctcaaagtgggatttagcaaaatgtgattctgaaatcaatgttttccaaattttgca |
8536568 |
T |
|
| Q |
1007 |
aacacatttacaaatgagaagagactt |
1033 |
Q |
| |
|
||| |||||||||||||||| ||||| |
|
|
| T |
8536569 |
cacagatttacaaatgagaagcgactt |
8536595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 82 - 433
Target Start/End: Complemental strand, 1600290 - 1599940
Alignment:
| Q |
82 |
gtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatcccttt |
181 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||| ||| ||| || | ||||||||||||||||| |||||||| |
|
|
| T |
1600290 |
gtaaaccttagtccatgattcttcaatgccatattccttcataacccacattggaacatcagataaaaaggt--agtcacaaatgtaaagaaatcccttt |
1600193 |
T |
|
| Q |
182 |
aattctcccaagctaatacgtcttctcgcaccacgaacttcggtattatgattttcaaacacagatgaaggagagggaaatgattgaaacctctctcttt |
281 |
Q |
| |
|
|||||||||| ||||| | | || | ||||| | | | ||||||||||| ||||| || || |||||| |||||||| || |||||||| |||| |
|
|
| T |
1600192 |
aattctcccatgctaacatggctgtt---accacaagttccattattatgatttccaaactcatgtggaggagaaggaaatgactgcaacctctcacttt |
1600096 |
T |
|
| Q |
282 |
caaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaat |
381 |
Q |
| |
|
||||||| ||| |||||| ||| | | ||| | ||| |||||||||||||||| ||||||||||||||||| | |||| || ||||||| |
|
|
| T |
1600095 |
caaaacagaaaaccaatattgacatttgctcaccctcatatcttatccaatgaagtgcaccattcacacaagtgggattcttaagcatccaaaaagaaat |
1599996 |
T |
|
| Q |
382 |
ttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
433 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||||||| ||||||| |||||||| |
|
|
| T |
1599995 |
ttgaggatccacttcaacatttctccaggatggtgttccaagtgtgtttatctcaa |
1599940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 57 - 360
Target Start/End: Original strand, 8644301 - 8644598
Alignment:
| Q |
57 |
aaggattggtcaaagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcga |
156 |
Q |
| |
|
||||| || ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| | ||| | | | |
|
|
| T |
8644301 |
aaggactgatcaaagtatcaatgttgtaaaccttagtccatgattctccaatgtcatattcattcataacccacattgcaacatcacgaaaagaatatgt |
8644400 |
T |
|
| Q |
157 |
gtcacaaatgtaaagacatccctttaattctcccaagctaatacgtcttctcg-caccacgaacttcggtattatgattttcaaacacagatgaaggaga |
255 |
Q |
| |
|
|| ||||||||||| ||||| |||||||||||| || |||||| |||| || ||||| | | |||| ||||||| |||||| || |||||| |
|
|
| T |
8644401 |
atcgcaaatgtaaagtaatccccttaattctcccatgcgaatacg----ctcgttacgacgaaatccattattttgattttgaaacac---tggaggaga |
8644493 |
T |
|
| Q |
256 |
gggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtg |
355 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||||||||||| | | |||| ||||| |||||||||||| |||| ||| ||| ||||| |
|
|
| T |
8644494 |
aggaaatgattgcaacctctcactttcaaaacagaaacacaatatagacctttcttcatcctcaaatctgatccaatgaagcgcaccattaacataagtg |
8644593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 595 - 744
Target Start/End: Original strand, 8529538 - 8529687
Alignment:
| Q |
595 |
gtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgc |
694 |
Q |
| |
|
||||||| |||| ||||||||||||||||||| |||| ||| ||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||| |
|
|
| T |
8529538 |
gtagtagattcaggaagtcttatgaactcccccgtgactgggttgcagatcactattgggtttccaaaagatgggtcagacaaacaaagtaaaccattgc |
8529637 |
T |
|
| Q |
695 |
aagaattcacaatatcaaaatgatcacgatctctgttgcaagcaatataa |
744 |
Q |
| |
|
||||||||||||||||||| | |||| |||||||||||||||||||||| |
|
|
| T |
8529638 |
aagaattcacaatatcaaacttatcaatatctctgttgcaagcaatataa |
8529687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 598 - 744
Target Start/End: Complemental strand, 1599802 - 1599656
Alignment:
| Q |
598 |
gtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaag |
697 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||||| | ||| |||||||||||||| || ||| |||||| |
|
|
| T |
1599802 |
gtagattcaggaagtcttatgaactccccagtgattgggttgcagatcactaatgggtttccgaaatatgggtcagacaaacaaagtaaaccattgcaag |
1599703 |
T |
|
| Q |
698 |
aattcacaatatcaaaatgatcacgatctctgttgcaagcaatataa |
744 |
Q |
| |
|
|||||||||||| ||| | |||| ||| |||||||||||||||||| |
|
|
| T |
1599702 |
aattcacaatattaaacttatcaaaatcactgttgcaagcaatataa |
1599656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 9074741 - 9074606
Alignment:
| Q |
56 |
gaaggattggtcaaagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcg |
155 |
Q |
| |
|
||||||||| | |||||||||||| |||||| ||||||||||| ||| |||| |||||||||||||||||||||| || ||||| ||| ||| | || |
|
|
| T |
9074741 |
gaaggattgaacgaagtatcaatgttgtaaactttagtccatgattcttcaataccatattcattcataacccacactgaaacatcagataaaaatgtcc |
9074642 |
T |
|
| Q |
156 |
agtcacaaatgtaaagacatccctttaattctccca |
191 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |
|
|
| T |
9074641 |
agtcacaaatgtaaagaaatccctttaattctccca |
9074606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 603 - 744
Target Start/End: Original strand, 8536110 - 8536251
Alignment:
| Q |
603 |
ttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattc |
702 |
Q |
| |
|
|||| |||||||||| |||||||| |||| ||| |||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||||||||||| |
|
|
| T |
8536110 |
ttcaggaagtcttataaactccccagtgactgggttgcagatcactaatgggtttccaaaagatgggtcagacaaacaaagtaaaccattgcaagaattc |
8536209 |
T |
|
| Q |
703 |
acaatatcaaaatgatcacgatctctgttgcaagcaatataa |
744 |
Q |
| |
|
||||||||||| | |||| |||||| ||||||||||||||| |
|
|
| T |
8536210 |
acaatatcaaacttatcaaaatctcttttgcaagcaatataa |
8536251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 72 - 433
Target Start/End: Original strand, 8641475 - 8641846
Alignment:
| Q |
72 |
tatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgag------tcacaaat |
165 |
Q |
| |
|
||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||| | ||||| || ||||| |||||||| |
|
|
| T |
8641475 |
tatcaatgttgtaagccttagtccatgattctccaatgccatattcattcataacccacactgtgacatcaaagaaaaaggtcgagtcacgatcacaaat |
8641574 |
T |
|
| Q |
166 |
gtaaagacatccctttaattctcccaagctaatacgtcttctcgcaccacgaa---cttcggtattatgattttcaaacacagatgaaggagagggaaat |
262 |
Q |
| |
|
|||| || |||||||||| ||||||| ||||||| | || | |||| ||| | | ||||||||||| |||||||| || |||||| |||||| |
|
|
| T |
8641575 |
gtaaggaaatccctttaactctcccatgctaataagcctgtt---accatgaattccattattattatgatttccaaacacatgtggaggagaaggaaat |
8641671 |
T |
|
| Q |
263 |
gattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtgggataca |
362 |
Q |
| |
|
| | || ||||| ||||| ||||| ||||| ||||| |||| | | | ||| |||| ||| |||||||| ||| ||||||||||||||||||| |
|
|
| T |
8641672 |
aacttcaatctctcactttccaaacagaaacataatattgacctttgctccccctcaaatttgattcaatgaagaacactattcacacaagtgggatact |
8641771 |
T |
|
| Q |
363 |
taagataagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
433 |
Q |
| |
|
||||| ||| |||||| ||||||||||||| ||||||||||| ||||| ||| ||||||| |||||||| |
|
|
| T |
8641772 |
taagactcgaaatagaaatctgaggatccacttcaacatttctccatgatggtgctccaagtgtgtttatctcaa |
8641846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 921 - 1042
Target Start/End: Original strand, 9004353 - 9004474
Alignment:
| Q |
921 |
gtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgcaaacacatttacaaa |
1020 |
Q |
| |
|
|||| |||||| |||| || | ||| || |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
9004353 |
gtccgaatcatgagactaattggtgctcgctcaaattgcaatttagcaaaatgtggttatgaaataattgttttccaaatcttgcacacacatctacaaa |
9004452 |
T |
|
| Q |
1021 |
tgagaagagacttgatgtgaag |
1042 |
Q |
| |
|
| ||||||||||| ||| |||| |
|
|
| T |
9004453 |
taagaagagacttaatgggaag |
9004474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 8636966 - 8637039
Alignment:
| Q |
67 |
caaagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8636966 |
caaagtatcgatgttgtaaaccttagtccatgattctccaatgccatattcattcataacccacattgcaacat |
8637039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 2856895 - 2856824
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2856895 |
aagtatcaatgttgtaaacaatagtccatgattctccaatgccatattcattcataacccacattgtaacat |
2856824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 2874505 - 2874434
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2874505 |
aagtatcaatgttgtaaacaatagtccatgattctccaatgccatattcattcataacccacattgtaacat |
2874434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 2905003 - 2904932
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2905003 |
aagtatcaatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgttacat |
2904932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 8677918 - 8677986
Alignment:
| Q |
72 |
tatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
8677918 |
tatcaatgttgtaaaccttagtccatgattctccaatgccatattcattcatatcccacattgcaacat |
8677986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 2845068 - 2844997
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2845068 |
aagtatcaatgctgtaaacaatagtccatgattctccaatgccatattcattcataacccacattgtaacat |
2844997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 637 - 707
Target Start/End: Complemental strand, 2844514 - 2844444
Alignment:
| Q |
637 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
707 |
Q |
| |
|
||||| |||||||||||| ||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2844514 |
ttgcaaatcactaaagggcttccgatagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2844444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 637 - 707
Target Start/End: Complemental strand, 2856347 - 2856277
Alignment:
| Q |
637 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
707 |
Q |
| |
|
||||| |||||||||||| ||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2856347 |
ttgcaaatcactaaagggcttccgatagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2856277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 637 - 707
Target Start/End: Complemental strand, 2873957 - 2873887
Alignment:
| Q |
637 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
707 |
Q |
| |
|
||||| |||||||||||| ||||| ||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2873957 |
ttgcaaatcactaaagggcttccgatagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2873887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 637 - 707
Target Start/End: Complemental strand, 2904463 - 2904393
Alignment:
| Q |
637 |
ttgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcacaat |
707 |
Q |
| |
|
||||| ||| |||||||| ||||||||| || |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2904463 |
ttgcaaatcgctaaagggcttccggtagatgtttcagataaacaaagcaagccattgcaagaattcacaat |
2904393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 2874248 - 2874139
Alignment:
| Q |
326 |
atccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagtg |
421 |
Q |
| |
|
|||||||||||||| | ||||||||| || |||| || ||| | || ||||||||||||||||||||| ||||||||||| |||||||||||| | |
|
|
| T |
2874248 |
atccaatgaagtgcgccattcacacatgttggattcaaaagcttcaaaaaagaaatttgaggatccacttcaacatttctccatgatggtgttccgagcg |
2874149 |
T |
|
| Q |
422 |
tgtgtatctc |
431 |
Q |
| |
|
|||||||||| |
|
|
| T |
2874148 |
tgtgtatctc |
2874139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 807 - 1042
Target Start/End: Complemental strand, 2904281 - 2904045
Alignment:
| Q |
807 |
aagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagct-cacactcaagatggtacatggttcttgacact |
905 |
Q |
| |
|
||||||||| | ||||||||| | |||||||||| |||||||| |||||| |||||||| ||||| | | ||||||||| |||| | | ||||||||||| |
|
|
| T |
2904281 |
aagaggaagttcgaatataggcttaagcttcacaagattgttggttccaaactcgaactattcaggttcgcactcaagaaggtataggtttcttgacact |
2904182 |
T |
|
| Q |
906 |
agtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgc |
1005 |
Q |
| |
|
| ||| || | | | |||||| | || | | ||| || |||||| ||||||||||| || | |||||||||||| ||| |||||||| |||| |
|
|
| T |
2904181 |
tctatattatctaattttctaatcatgaaactgattggtgctcgctcaaattgcaatttagcgaatttaggttctgaaataagtgtattccaaattttgc |
2904082 |
T |
|
| Q |
1006 |
aaacacatttacaaatgagaagagacttgatgtgaag |
1042 |
Q |
| |
|
| |||||| |||| |||||||||||||| ||| |||| |
|
|
| T |
2904081 |
acacacatctacatatgagaagagacttaatgggaag |
2904045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 328 - 433
Target Start/End: Original strand, 8535858 - 8535967
Alignment:
| Q |
328 |
ccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtg |
423 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| | ||| ||| ||||||||||||||||||||| ||||||||| | ||| ||||| |||||| |
|
|
| T |
8535858 |
ccaatgtagtgcaccattcacacaagtgggatactttagactcgaaaaagaaatttgaggatccacttcaacatttctccaggatggggttccaagtgtg |
8535957 |
T |
|
| Q |
424 |
tgtatctcaa |
433 |
Q |
| |
|
| |||||||| |
|
|
| T |
8535958 |
tttatctcaa |
8535967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 8637143 - 8637253
Alignment:
| Q |
250 |
aggagagggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcaca |
349 |
Q |
| |
|
|||||| ||||||||||| |||||||| |||| ||||| |||||||||||||||| | | ||||||||| ||||||||||| | || ||||||| |
|
|
| T |
8637143 |
aggagaaggaaatgattgcaacctctcattttctaaacagaaacacaatatagacctttcttgacccttaaatctgatccaatgaatcgtaccattcaca |
8637242 |
T |
|
| Q |
350 |
caagtgggata |
360 |
Q |
| |
|
||||||||||| |
|
|
| T |
8637243 |
caagtgggata |
8637253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 2856638 - 2856529
Alignment:
| Q |
326 |
atccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagtg |
421 |
Q |
| |
|
|||||||||||||| | ||||||||| || |||| || ||| | || ||||||||||||||||||||| ||||||||||| || ||||||||| | |
|
|
| T |
2856638 |
atccaatgaagtgcgccattcacacatgttggattcaaaagcttcaaaaaagaaatttgaggatccacttcaacatttctccatgatgatgttccgagcg |
2856539 |
T |
|
| Q |
422 |
tgtgtatctc |
431 |
Q |
| |
|
|||||||||| |
|
|
| T |
2856538 |
tgtgtatctc |
2856529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 430
Target Start/End: Complemental strand, 9074578 - 9074369
Alignment:
| Q |
225 |
tattatgattttcaaacacagatgaaggagagggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcg |
324 |
Q |
| |
|
||||||| ||| |||||||| | |||||| |||||||| || |||||||| ||||||||||| ||| ||||||| |||| | | | | | ||| |
|
|
| T |
9074578 |
tattatggtttccaaacacatgcggaggagaaggaaatgactgcaacctctcactttcaaaacagaaaaacaatattgacctttgctgattttcatatct |
9074479 |
T |
|
| Q |
325 |
gatccaatgaagtgcacgattcacacaagtgggatacataagataagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagt |
420 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||| || ||| |||||| ||| |
|
|
| T |
9074478 |
tatccaatgaagtgcaccattcacacaagtgggatactcgagactcaaaaaagaaatttgaggatccacttcaacatttctcaatattgttgttccaagt |
9074379 |
T |
|
| Q |
421 |
gtgtgtatct |
430 |
Q |
| |
|
|||| ||||| |
|
|
| T |
9074378 |
gtgtttatct |
9074369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 2904705 - 2904643
Alignment:
| Q |
375 |
aagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
433 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||||||||| ||||||||||||| |
|
|
| T |
2904705 |
aagaaatttgaggatccacttcaagatttctccatgatgttgttccgagcgtgtgtatctcaa |
2904643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 610 - 704
Target Start/End: Complemental strand, 11353992 - 11353898
Alignment:
| Q |
610 |
agtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcac |
704 |
Q |
| |
|
|||||||| ||||| ||| | ||||||||||| | |||||| ||||| | ||| ||| ||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
11353992 |
agtcttataaactcacctataattggattgcaaacaactaaatggtttacagtatatggctcagataaacaaagcaagccattgcaggaattcac |
11353898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 610 - 704
Target Start/End: Original strand, 11373401 - 11373495
Alignment:
| Q |
610 |
agtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaagaattcac |
704 |
Q |
| |
|
|||||||| ||||| ||| | ||||||||||| | |||||| ||||| | ||| ||| ||||| ||||||||||||||| |||| |||||||| |
|
|
| T |
11373401 |
agtcttataaactcacctataattggattgcaaacaactaaatggtttacagtatatggctcagataaacaaagcaagccattgcaggaattcac |
11373495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 205; Significance: 1e-111; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 494 - 1065
Target Start/End: Original strand, 16716885 - 16717455
Alignment:
| Q |
494 |
tccaaatatttatcactttatattcattagttttaggatagaaaccacaaccagctgcttcttgatttaaaacataatctgtgtcatttggcatacgaat |
593 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| || |||| | | ||||||| |||||||||| |
|
|
| T |
16716885 |
tccaaatatgtatcactttatattcattagttttaggatagaaaccaaaaccagct---tcttgtcctattacatgaaccctgtcattcggcatacgaac |
16716981 |
T |
|
| Q |
594 |
cgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactg |
693 |
Q |
| |
|
||||||| |||| ||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||| | |
|
|
| T |
16716982 |
tgtagtagtttcaggaagtcttatgaattcccccatgaatgggttgcagatcactatagggtttccagtagttggttcagacaaacatagcaagccatta |
16717081 |
T |
|
| Q |
694 |
caagaattcacaatatcaaaatgatcacgatctctgttgcaagcaatataagggcgcttggatttattcttgatcccgtcacttttctccctaaatgatt |
793 |
Q |
| |
|
|| ||||||||||||| ||| | ||||||||| ||||||| |||||||||| | ||||| |||||||||| ||| |||||||||| || || ||||| |
|
|
| T |
16717082 |
catgaattcacaatattaaacttatcacgatcactgttgccagcaatataaacgtgcttgtatttattctttatcttgtcacttttcatcccaagtgatt |
16717181 |
T |
|
| Q |
794 |
tgatataaccacgaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttc-agctcacactcaagatggtacat |
892 |
Q |
| |
|
||| || ||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||| |||||||| | || ||||| ||| |||| | |
|
|
| T |
16717182 |
tgacatcaccgcgaagaggaagtctgaatataggctcaagattcacatgattgttgcttccaatctcaaacttttctggatcgcactctagaaggtagag |
16717281 |
T |
|
| Q |
893 |
ggttcttgacactagtctatcgtcatc-tgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgt |
991 |
Q |
| |
|
||||||||||||| || ||| || ||| ||| | |||||| |||| || | ||||| ||||||||| |||||||||||||| ||||||||| ||| | |
|
|
| T |
16717282 |
ggttcttgacactcgtttatagt-atcttgttcgaatcatgagactaattggtgattgctcaaagtgtaatttagcaaaatgcgattctgaaatcattct |
16717380 |
T |
|
| Q |
992 |
tttccaaatcttgcaaacacatttacaaatgagaagagacttgatgtgaagtt-tagcagaatgtgggcagtgag |
1065 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |
|
|
| T |
16717381 |
tttccaaattttgcacacacatttacaaatgagaagagacttgatgggaagttgaagcaaaatgtgggcggtgag |
16717455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 16716385 - 16716577
Alignment:
| Q |
6 |
caccctcttcaaagtgttttaccggcaaacacaaagcatgacgccgcggagaaggattggtcaaagtatcaatgtggtaaaccttagtccatgactctcc |
105 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||| || || || |||| ||| ||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
16716385 |
caccctcttcaaagtgttttaccggaaaacacaaaacatcaccccacgataaaggtttgtacaa-gtatcaatgtggtaaaccttagtccatgattctcc |
16716483 |
T |
|
| Q |
106 |
aatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaata |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||| ||| |||||||||||||||||| ||||||| |
|
|
| T |
16716484 |
aatgccatattcattcataacccacattgtaacatattcgaagaagtttgagtcagaaatgtatagaaatccctttaattctcccatgctaata |
16716577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 251 - 436
Target Start/End: Original strand, 16716647 - 16716836
Alignment:
| Q |
251 |
ggagagggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacac |
350 |
Q |
| |
|
||||| |||||||| || ||| |||| ||||||||||||||||||||||||||| | |||| ||| |||| || |||||||||||||| |||||||| |
|
|
| T |
16716647 |
ggagaaggaaatgaatgcaacttctcactttcaaaacaaaaacacaatatagacatttcccttccctcaaatgtgaaccaatgaagtgcaccattcacac |
16716746 |
T |
|
| Q |
351 |
aagtgggatacataagataagaagaagaaatttgaggatccac----ttatttctccatgttggtgttccgagtgtgtgtatctcaacaa |
436 |
Q |
| |
|
||||||||| ||||||| | ||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16716747 |
aagtgggattcataagacatgaaaatgaaatttgaggatccacattgatatttctccatgttggtgttccgagtgtgtgtatctcaacaa |
16716836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 201; Significance: 1e-109; HSPs: 3)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 494 - 1044
Target Start/End: Original strand, 5187 - 5720
Alignment:
| Q |
494 |
tccaaatatttatcactttatattcattagttttaggatagaaaccacaaccagctgcttcttgatttaaaacataatctgtgtcatttggcatacgaat |
593 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||| || ||| | | ||||||| ||||||||||| |
|
|
| T |
5187 |
tccaaatatgtatcactttatattcattagtcgtaggatagaaaccaaaaccagct---tcttgtcctattacacgaaccgtgtcatgtggcatacgaac |
5283 |
T |
|
| Q |
594 |
cgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactg |
693 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |
|
|
| T |
5284 |
cgtattagcttcaggaagtcttatgaactcccccatgaatgggttgcagatcactaaagggtttccggtagttggttgagacaaacatagcaagccatta |
5383 |
T |
|
| Q |
694 |
caagaattcacaatatcaaaatgatcacgatctctgttgcaagcaatataagggcgcttggatttattcttgatcccgtcacttttctccctaaatgatt |
793 |
Q |
| |
|
|| |||||||||||| ||||| ||| |||||||| |||||||||||||||||| |||| ||||||| ||| || ||||| ||||| |
|
|
| T |
5384 |
caggaattcacaatactaaaattatcgcgatctctattgcaagcaatataagggtgcttagatttatacttcat---------------cctaagtgatt |
5468 |
T |
|
| Q |
794 |
tgatataaccacgaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttca-gctcacactcaagatggtacat |
892 |
Q |
| |
|
||| || ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| | | || || |||||| |||| | |
|
|
| T |
5469 |
tgacatcaccacgaagagtaagcctgaatataggctcaagcttcacatgattgttgcttccaatctcaaactttttaggatcgcattcaagaaggtatag |
5568 |
T |
|
| Q |
893 |
ggttcttgacactagtctatcgtcatc-tgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgt |
991 |
Q |
| |
|
||||||||||||| |||||| || ||| ||| | |||||| |||| || |||||| ||||||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
5569 |
ggttcttgacactcgtctatagt-atcttgttcgaatcatgagactaatcggtgatcgctcaaagtgtaatttagcaaaatgtggttctgaaatcattgc |
5667 |
T |
|
| Q |
992 |
tttccaaatcttgcaaacacatttacaaatgagaagagacttgatgtgaagtt |
1044 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5668 |
tttccaaattttgcacacacatttacaaatgagaagagacttgatgggaagtt |
5720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 4685 - 4878
Alignment:
| Q |
6 |
caccctcttcaaagtgttttaccggcaaacacaaagcatgacgccgcggagaaggattggtcaaagtatcaatgtggtaaaccttagtccatgactctcc |
105 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||||||||||| || || |
|
|
| T |
4685 |
caccctcttcaaagtgttttaccggaaaatacaaaggatgacgccacgctaaaggattgtacaaagtattaatgtggtaaaccttagtccatgattcacc |
4784 |
T |
|
| Q |
106 |
aatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatccctttaattctcccaagctaata |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
4785 |
aatgccatattcattcataacccacattgtaacatattttaaggagtttgagtcacaaatgtaaagaaatccctttaattctcccatgctaata |
4878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #3
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 251 - 436
Target Start/End: Original strand, 4948 - 5135
Alignment:
| Q |
251 |
ggagagggaaatgattgaaacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacac |
350 |
Q |
| |
|
||||||||||||||||| |||||||| || ||||||||||||||||||| ||| | || | ||| ||||| ||||||||||||||||| |||||||| |
|
|
| T |
4948 |
ggagagggaaatgattgcaacctctcactgtcaaaacaaaaacacaata--gacgtttcctttccctcaaatctgatccaatgaagtgcaccattcacac |
5045 |
T |
|
| Q |
351 |
aagtgggatacataagataagaagaagaaatttgaggatccac----ttatttctccatgttggtgttccgagtgtgtgtatctcaacaa |
436 |
Q |
| |
|
||||||||| ||||||| | ||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
5046 |
aagtgggattcataagacatgaaaatgaaatttgaggatccacattgatatttctccatgttgatgttccgagtgtgtgtatctcgacaa |
5135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 108; Significance: 1e-53; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 808 - 1065
Target Start/End: Complemental strand, 48361090 - 48360832
Alignment:
| Q |
808 |
agaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttcagc-tcacactcaagatggtacatggttcttgacacta |
906 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
48361090 |
agaggaagcttgaatataggtgtaagcttcacatggttgttgcttccaatctcaaacttttcaggatcacactcaagaaggtacatggttcttgacactc |
48360991 |
T |
|
| Q |
907 |
gtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgca |
1006 |
Q |
| |
|
||||| |||| |||| |||||| |||| || | |||||| |||||||||| |||||||||| ||| ||||||||| | |||||||||||| ||||| |
|
|
| T |
48360990 |
ctctatagtcagg-gtccgaatcatgagactaagtggtgatcgctcaaagtgcgatttagcaaattgtgattctgaaatcagtgttttccaaattttgca |
48360892 |
T |
|
| Q |
1007 |
aacacatttacaaatgagaagagacttgatgtgaagtt-tagcagaatgtgggcagtgag |
1065 |
Q |
| |
|
||| |||||||||| ||||||||||| ||| |||||| || ||||||||||||||||| |
|
|
| T |
48360891 |
cacagatttacaaataagaagagacttaatgggaagttgaaggagaatgtgggcagtgag |
48360832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 77 - 433
Target Start/End: Complemental strand, 48361849 - 48361492
Alignment:
| Q |
77 |
atgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgtaaagacatc |
176 |
Q |
| |
|
|||| ||||||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||||| ||| | || |||||||||||||||||||| ||| |
|
|
| T |
48361849 |
atgttgtaaaccttagtctatgattcttcaataccatattcattcataacccacattgaaacatcagatgcaaaggtcgagtcacaaatgtaaagaaatc |
48361750 |
T |
|
| Q |
177 |
cctttaattctcccaagctaatacgtcttctcgcaccacgaacttcggtattatgattttcaaacacagatgaaggagagggaaatgattgaaacctctc |
276 |
Q |
| |
|
||||||||||||||| ||||||| | || | |||| ||| | | ||||||||||| |||||||| || |||||| |||||||| || | |||||| |
|
|
| T |
48361749 |
cctttaattctcccatgctaatatgcctgtt---accaagaattccattattatgatttccaaacacatgtggaggagaaggaaatgactgcaccctctc |
48361653 |
T |
|
| Q |
277 |
tctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagataagaagaa |
376 |
Q |
| |
|
||||||||||| ||| ||||||| |||| | | ||| ||||| |||||||||||||||| ||||||||||||||||||| ||| ||| || |
|
|
| T |
48361652 |
actttcaaaacagaaaaacaatattgacctttgctgaccctcaaatcttatccaatgaagtgcaccattcacacaagtgggatactcgagactcgaaaaa |
48361553 |
T |
|
| Q |
377 |
gaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
433 |
Q |
| |
|
||||| ||||||||||||| ||| ||||| | ||||||||| ||||||| |||||||| |
|
|
| T |
48361552 |
gaaatgtgaggatccacttcaacattcctccaggatggtgttccaagtgtgtttatctcaa |
48361492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 597 - 744
Target Start/End: Complemental strand, 48361355 - 48361208
Alignment:
| Q |
597 |
agtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgcaa |
696 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||||| |
|
|
| T |
48361355 |
agtagattcaggaagtcttatgaactcccctgtgactgggttgcagatcactaacgggtttcccaaagatggatcagacaaacaaagtaaaccattgcaa |
48361256 |
T |
|
| Q |
697 |
gaattcacaatatcaaaatgatcacgatctctgttgcaagcaatataa |
744 |
Q |
| |
|
||||||||||||||||| | |||| |||||||||||||||||||||| |
|
|
| T |
48361255 |
gaattcacaatatcaaacttatcaaaatctctgttgcaagcaatataa |
48361208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 35779929 - 35780061
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgta |
168 |
Q |
| |
|
|||| ||||||| ||||||||||||||| || ||| ||||||||| ||||||||||||||||||||||||| | ||| | ||| ||||||||||||| |
|
|
| T |
35779929 |
aagtctcaatgttgtaaaccttagtccacgattcttcaatgccatgctcattcataacccacattgtaacatcaacaaaaaaattcaagtcacaaatgta |
35780028 |
T |
|
| Q |
169 |
aagacatccctttaattctcccaagctaatacg |
201 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| |
|
|
| T |
35780029 |
aagaaatccctttaattctcccatgctaatacg |
35780061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 746 - 1065
Target Start/End: Original strand, 35780650 - 35780968
Alignment:
| Q |
746 |
ggcgcttggatttattcttgatcccgtcacttttctccctaaatgatttgatataaccacgaagaggaagcttgaatataggatcaagcttcacatgatt |
845 |
Q |
| |
|
||||||||||||||||||||||| || |||||||| ||||| |||| ||||| ||||||||||||| ||||| || |||||||||||| |||| |
|
|
| T |
35780650 |
ggcgcttggatttattcttgatcttgtgcattttctccttaaataatttcccataac---gaagaggaagcttaaatatggggtcaagcttcacaagatt |
35780746 |
T |
|
| Q |
846 |
gttgcttccaatctcgaacttttca-gctcacactcaagatggtacatggttcttgacac-tagtctatcgtcatctgtccaaatcattagacaaacttg |
943 |
Q |
| |
|
||| ||||||| ||| ||||||||| |||||||||||||| ||| || |||||||||||| | |||| | | |||| || ||| |||| | | | |
|
|
| T |
35780747 |
gttccttccaaactcaaacttttcaggctcacactcaagaaggtgcagggttcttgacacatgatcta-agcgacgggtccgaaccatgagactagttgg |
35780845 |
T |
|
| Q |
944 |
tgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgcaaacacatttacaaatgagaagagacttgatgtgaagt |
1043 |
Q |
| |
|
|||| ||||||||||||||||||||| || |||||||||| |||||||| || || |||| |||||| |||||||||||||||| || ||| ||||| |
|
|
| T |
35780846 |
tgatagctcaaagtgcaatttagcaaattgcggttctgaaatcattgtttttcagattatgcacacacatctacaaatgagaagagattttatgggaagt |
35780945 |
T |
|
| Q |
1044 |
t-tagcagaatgtgggcagtgag |
1065 |
Q |
| |
|
| |||| ||||||||| ||||| |
|
|
| T |
35780946 |
tgaagcaaaatgtgggcggtgag |
35780968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 593 - 709
Target Start/End: Original strand, 35780427 - 35780544
Alignment:
| Q |
593 |
tcgtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaaggg-tttccggtagttggttcagacaaacaaagcaagccac |
691 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||| ||| ||||| |||||||||||| ||| ||||| ||| | ||||||||||||||| ||| |
|
|
| T |
35780427 |
tcgtagtagcttcaggaagtcttatgaactcccccgtgactgggttgcaaatcactaaagggtttttcggtatatggattagacaaacaaagcaaaccat |
35780526 |
T |
|
| Q |
692 |
tgcaagaattcacaatat |
709 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
35780527 |
tgcaagaattgacaatat |
35780544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 502 - 549
Target Start/End: Original strand, 35780336 - 35780383
Alignment:
| Q |
502 |
tttatcactttatattcattagttttaggatagaaaccacaaccagct |
549 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
35780336 |
tttatcaccttatattcattagttttaggttggaaaccaaaaccagct |
35780383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 502 - 549
Target Start/End: Complemental strand, 48361435 - 48361388
Alignment:
| Q |
502 |
tttatcactttatattcattagttttaggatagaaaccacaaccagct |
549 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
48361435 |
tttatcaccttatattcattagttttaggttggaaaccaaaaccagct |
48361388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 95; Significance: 7e-46; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 69 - 433
Target Start/End: Original strand, 9443205 - 9443564
Alignment:
| Q |
69 |
aagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacataagagaaacagttcgagtcacaaatgta |
168 |
Q |
| |
|
||||||| |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| | | || ||| ||||||||||| |
|
|
| T |
9443205 |
aagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatgta |
9443304 |
T |
|
| Q |
169 |
aagacatccctttaattctcccaagctaatacgtcttctcgcaccacgaacttcggtattatgattttcaaacacagatgaaggagagggaaatgattga |
268 |
Q |
| |
|
||| |||||||||||||||||| ||||||| | || || || | ||| |||||||||| |||||||| || |||||| |||||||| || |
|
|
| T |
9443305 |
tagaaatccctttaattctcccatgctaataggcctact---acaataaac------attatgatttccaaacacatgtggaggagaaggaaatgactgc |
9443395 |
T |
|
| Q |
269 |
aacctctctctttcaaaacaaaaacacaatatagaccctcccctctccttaaatcggatccaatgaagtgcacgattcacacaagtgggatacataagat |
368 |
Q |
| |
|
|||||||| |||||||| || ||| |||||| |||| | | |||| ||||| |||||||||||||||| ||||||||||||||||||| | ||| |
|
|
| T |
9443396 |
aacctctcactttcaaagcagaaaaccaatattgacctttgctcatcctcaaatcttatccaatgaagtgcaccattcacacaagtgggatactttagac |
9443495 |
T |
|
| Q |
369 |
aagaagaagaaatttgaggatccactt----atttctccatgttggtgttccgagtgtgtgtatctcaa |
433 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||| | || |||||| ||||||| |||||||| |
|
|
| T |
9443496 |
tcgaaaaagaaatttgaggatccacttcaacatttctccaggatgttgttccaagtgtgtttatctcaa |
9443564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 808 - 1033
Target Start/End: Original strand, 9443966 - 9444186
Alignment:
| Q |
808 |
agaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatctcgaacttttca-gctcacactcaagatggtacatggttcttgacacta |
906 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| |||| ||||||||| |||| | ||||||||||||| |
|
|
| T |
9443966 |
agaggaagcttgaatataggtgcaagcttgacatgattgttgcttccaatctcaaacttatcaggctcgcactcaagaaggtatagggttcttgacactc |
9444065 |
T |
|
| Q |
907 |
gtctatcgtcatctgtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgca |
1006 |
Q |
| |
|
| | ||| ||| | |||||| |||| || | |||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||| |
|
|
| T |
9444066 |
g-gtgtcg-----tgttcgaatcatgagactaattggtgatcgctcaaagtgcaatttagcaaattgtgattctgaaatcattgttttccaaactttgca |
9444159 |
T |
|
| Q |
1007 |
aacacatttacaaatgagaagagactt |
1033 |
Q |
| |
|
||| ||||||||||||||| |||||| |
|
|
| T |
9444160 |
cacagatttacaaatgagaacagactt |
9444186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 595 - 744
Target Start/End: Original strand, 9443699 - 9443848
Alignment:
| Q |
595 |
gtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgc |
694 |
Q |
| |
|
||||||| |||| ||||||||||||||||||| |||| ||| ||||||||||||| |||||||| || ||| |||||||||||||| || ||| ||| |
|
|
| T |
9443699 |
gtagtagattcaggaagtcttatgaactcccccgtgactgggttgcagatcactattgggtttccaaaagatgggtcagacaaacaaagtaaaccattgc |
9443798 |
T |
|
| Q |
695 |
aagaattcacaatatcaaaatgatcacgatctctgttgcaagcaatataa |
744 |
Q |
| |
|
||||||||||||||||||| | |||| ||||||||||||| |||||||| |
|
|
| T |
9443799 |
aagaattcacaatatcaaacttatcaatatctctgttgcaatcaatataa |
9443848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 26324288 - 26324204
Alignment:
| Q |
56 |
gaaggattggtcaaagtatcaatgtggtaaaccttagtccatgactctccaatgccatattcattcataacccacattgtaacat |
140 |
Q |
| |
|
||||||||| | ||| ||| |||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
26324288 |
gaaggattgaacgaagcatcgatgttgtaaatcttagtccatgattctccagtgccatattcattcataacccacattgaaacat |
26324204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 950 - 1043
Target Start/End: Complemental strand, 25290757 - 25290664
Alignment:
| Q |
950 |
ctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgcaaacacatttacaaatgagaagagacttgatgtgaagt |
1043 |
Q |
| |
|
||||||||||| ||| ||||||||| | |||||||| | ||| ||||| | | |||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
25290757 |
ctcaaagtgcactttggcaaaatgtggatctgaaatcactgtgttccatgttctacaaacacatttacatacgagaacagacttgatgggaagt |
25290664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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