View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2226_low_5 (Length: 369)

Name: NF2226_low_5
Description: NF2226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2226_low_5
NF2226_low_5
[»] chr5 (47 HSPs)
chr5 (152-253)||(12349665-12349765)
chr5 (270-349)||(31752138-31752216)
chr5 (270-349)||(7944310-7944388)
chr5 (270-349)||(25912124-25912202)
chr5 (270-349)||(33696075-33696153)
chr5 (76-155)||(12349518-12349598)
chr5 (270-346)||(17421716-17421791)
chr5 (270-349)||(3038909-3038987)
chr5 (270-349)||(4083760-4083838)
chr5 (270-349)||(12910104-12910182)
chr5 (270-349)||(14369789-14369867)
chr5 (270-349)||(31240326-31240404)
chr5 (271-349)||(28747785-28747862)
chr5 (272-349)||(17232998-17233074)
chr5 (270-349)||(4737954-4738032)
chr5 (270-349)||(8410700-8410778)
chr5 (270-349)||(22701826-22701903)
chr5 (270-349)||(39548922-39549000)
chr5 (270-349)||(6436445-6436523)
chr5 (270-349)||(17233354-17233432)
chr5 (270-349)||(39038541-39038619)
chr5 (271-349)||(6261073-6261150)
chr5 (271-347)||(9124725-9124801)
chr5 (300-349)||(15809026-15809075)
chr5 (300-349)||(30687997-30688046)
chr5 (304-349)||(37249361-37249406)
chr5 (270-349)||(2528789-2528868)
chr5 (270-349)||(2695178-2695255)
chr5 (270-349)||(10951077-10951155)
chr5 (303-350)||(17209957-17210004)
chr5 (270-349)||(22800723-22800801)
chr5 (300-350)||(33026283-33026333)
chr5 (300-349)||(3960720-3960769)
chr5 (300-349)||(17605096-17605145)
chr5 (300-349)||(29302187-29302236)
chr5 (278-349)||(13711114-13711185)
chr5 (270-349)||(33832738-33832817)
chr5 (105-157)||(41871877-41871929)
chr5 (182-232)||(950616-950666)
chr5 (303-349)||(4736850-4736896)
chr5 (271-349)||(10471017-10471094)
chr5 (303-349)||(40234170-40234216)
chr5 (21-58)||(12349493-12349530)
chr5 (308-349)||(38661242-38661283)
chr5 (305-349)||(26905956-26906000)
chr5 (281-349)||(31752485-31752552)
chr5 (301-349)||(33282312-33282360)
[»] chr8 (45 HSPs)
chr8 (270-349)||(13269270-13269348)
chr8 (270-349)||(27545842-27545920)
chr8 (271-349)||(10616373-10616450)
chr8 (272-349)||(36899821-36899897)
chr8 (273-349)||(32069104-32069179)
chr8 (270-349)||(13468337-13468415)
chr8 (270-349)||(30633101-30633179)
chr8 (270-349)||(35550628-35550706)
chr8 (270-347)||(26042977-26043053)
chr8 (270-349)||(8258358-8258436)
chr8 (270-349)||(29125746-29125824)
chr8 (270-349)||(30207249-30207327)
chr8 (270-349)||(32486963-32487041)
chr8 (271-349)||(9483957-9484034)
chr8 (272-349)||(1281922-1281998)
chr8 (272-349)||(39934439-39934515)
chr8 (270-349)||(3369794-3369871)
chr8 (301-349)||(14826358-14826406)
chr8 (270-349)||(1201751-1201829)
chr8 (270-349)||(2823638-2823716)
chr8 (270-349)||(5946823-5946900)
chr8 (274-349)||(23544832-23544906)
chr8 (270-349)||(25123460-25123538)
chr8 (270-349)||(10777058-10777133)
chr8 (271-349)||(34103082-34103159)
chr8 (300-349)||(1783084-1783133)
chr8 (300-349)||(9483731-9483780)
chr8 (300-349)||(21442416-21442465)
chr8 (153-240)||(22575765-22575853)
chr8 (270-349)||(13290578-13290656)
chr8 (300-343)||(19971497-19971540)
chr8 (300-343)||(21021273-21021316)
chr8 (270-349)||(25127953-25128031)
chr8 (270-349)||(26867959-26868037)
chr8 (271-349)||(45299625-45299702)
chr8 (300-349)||(31071635-31071684)
chr8 (162-203)||(35237063-35237104)
chr8 (270-335)||(42556758-42556822)
chr8 (152-208)||(39972235-39972291)
chr8 (270-349)||(9413890-9413968)
chr8 (270-321)||(23161355-23161405)
chr8 (152-201)||(5074808-5074857)
chr8 (300-349)||(21352298-21352347)
chr8 (273-349)||(35067083-35067159)
chr8 (193-238)||(43351933-43351978)
[»] chr7 (48 HSPs)
chr7 (270-349)||(18352396-18352474)
chr7 (270-349)||(25818522-25818600)
chr7 (270-349)||(41407380-41407458)
chr7 (270-349)||(938933-939011)
chr7 (270-349)||(2936678-2936756)
chr7 (270-349)||(11766159-11766237)
chr7 (270-349)||(28912120-28912198)
chr7 (270-347)||(2509403-2509478)
chr7 (270-347)||(38367938-38368014)
chr7 (270-349)||(9401736-9401814)
chr7 (270-349)||(41037396-41037474)
chr7 (270-349)||(454142-454220)
chr7 (270-349)||(2633973-2634048)
chr7 (271-349)||(19069435-19069512)
chr7 (271-349)||(38796904-38796981)
chr7 (300-349)||(14770143-14770192)
chr7 (300-349)||(15220594-15220643)
chr7 (300-349)||(20516988-20517037)
chr7 (300-349)||(24720329-24720378)
chr7 (304-349)||(32577615-32577660)
chr7 (300-349)||(38876248-38876297)
chr7 (300-349)||(45225328-45225377)
chr7 (270-349)||(6736590-6736669)
chr7 (301-349)||(12080768-12080816)
chr7 (270-349)||(23740076-23740155)
chr7 (270-349)||(2362790-2362865)
chr7 (301-343)||(7437885-7437927)
chr7 (270-347)||(15957295-15957372)
chr7 (300-349)||(4655113-4655162)
chr7 (270-347)||(6559395-6559471)
chr7 (300-349)||(14719074-14719123)
chr7 (300-349)||(14777995-14778044)
chr7 (300-349)||(15230133-15230182)
chr7 (300-349)||(27168306-27168355)
chr7 (270-323)||(27168359-27168411)
chr7 (300-349)||(27812010-27812059)
chr7 (300-349)||(32852925-32852974)
chr7 (103-156)||(37848327-37848380)
chr7 (300-341)||(45225461-45225502)
chr7 (300-349)||(48193221-48193270)
chr7 (300-349)||(48454625-48454674)
chr7 (301-349)||(34986594-34986642)
chr7 (300-343)||(22479274-22479317)
chr7 (300-334)||(8048064-8048098)
chr7 (300-349)||(11327664-11327713)
chr7 (300-349)||(18123162-18123211)
chr7 (300-333)||(28605510-28605543)
chr7 (270-322)||(3512711-3512762)
[»] chr6 (29 HSPs)
chr6 (270-349)||(33730555-33730633)
chr6 (152-236)||(26539054-26539138)
chr6 (270-349)||(4898527-4898605)
chr6 (270-349)||(14488332-14488410)
chr6 (270-349)||(11100090-11100169)
chr6 (271-349)||(4898208-4898286)
chr6 (270-349)||(30525435-30525513)
chr6 (270-349)||(25061688-25061766)
chr6 (271-349)||(11742357-11742434)
chr6 (300-349)||(29646282-29646331)
chr6 (300-349)||(31132959-31133008)
chr6 (301-349)||(9955878-9955926)
chr6 (273-349)||(18102725-18102800)
chr6 (270-349)||(15718242-15718320)
chr6 (270-347)||(3438076-3438152)
chr6 (300-349)||(4184342-4184391)
chr6 (300-349)||(8171942-8171991)
chr6 (271-323)||(4838310-4838361)
chr6 (301-349)||(27828394-27828442)
chr6 (300-343)||(1369987-1370030)
chr6 (300-343)||(16599158-16599201)
chr6 (152-203)||(31490773-31490824)
chr6 (271-349)||(18154579-18154656)
chr6 (302-335)||(5187866-5187899)
chr6 (304-349)||(9406649-9406694)
chr6 (300-349)||(11100463-11100512)
chr6 (270-347)||(21969977-21970053)
chr6 (300-341)||(26667956-26667997)
chr6 (301-341)||(15962828-15962868)
[»] chr4 (54 HSPs)
chr4 (270-349)||(38425746-38425824)
chr4 (270-349)||(6137593-6137671)
chr4 (270-349)||(6946684-6946762)
chr4 (270-349)||(11777590-11777668)
chr4 (270-349)||(40496237-40496315)
chr4 (271-349)||(20458927-20459004)
chr4 (270-349)||(14863012-14863089)
chr4 (270-349)||(4712696-4712774)
chr4 (270-349)||(6193050-6193128)
chr4 (270-349)||(9744226-9744304)
chr4 (270-349)||(16553464-16553542)
chr4 (270-349)||(26335780-26335858)
chr4 (270-349)||(46106713-46106791)
chr4 (271-349)||(15725219-15725296)
chr4 (273-349)||(23384017-23384092)
chr4 (270-349)||(26958595-26958673)
chr4 (270-349)||(36955396-36955474)
chr4 (270-349)||(45875798-45875876)
chr4 (270-349)||(52437520-52437598)
chr4 (270-347)||(29102024-29102100)
chr4 (270-349)||(33811084-33811162)
chr4 (270-349)||(49425854-49425932)
chr4 (300-349)||(3818831-3818880)
chr4 (300-349)||(10216333-10216382)
chr4 (300-349)||(13211902-13211951)
chr4 (300-349)||(17181037-17181086)
chr4 (270-327)||(43639016-43639072)
chr4 (300-349)||(48560085-48560134)
chr4 (300-349)||(49970682-49970731)
chr4 (270-347)||(54742487-54742563)
chr4 (301-349)||(578841-578889)
chr4 (301-349)||(14202952-14203000)
chr4 (301-349)||(30258208-30258256)
chr4 (270-349)||(4490704-4490782)
chr4 (300-343)||(21519818-21519861)
chr4 (270-341)||(49606058-49606128)
chr4 (300-349)||(5046722-5046771)
chr4 (300-349)||(5157085-5157134)
chr4 (300-341)||(12584376-12584417)
chr4 (182-231)||(34360967-34361016)
chr4 (305-349)||(142692-142736)
chr4 (301-349)||(13621396-13621444)
chr4 (301-349)||(41172498-41172546)
chr4 (301-349)||(43639068-43639116)
chr4 (278-349)||(33105959-33106029)
chr4 (270-349)||(52306807-52306885)
chr4 (152-202)||(39418201-39418251)
chr4 (300-349)||(51784050-51784100)
chr4 (270-323)||(6137537-6137589)
chr4 (300-349)||(6214070-6214119)
chr4 (300-349)||(13371298-13371347)
chr4 (300-349)||(13381499-13381548)
chr4 (300-349)||(42807993-42808042)
chr4 (305-349)||(30820570-30820614)
[»] chr2 (38 HSPs)
chr2 (270-349)||(34082646-34082724)
chr2 (152-242)||(29260211-29260300)
chr2 (272-349)||(33739626-33739702)
chr2 (270-349)||(11675231-11675310)
chr2 (270-349)||(1750226-1750304)
chr2 (270-349)||(23664828-23664906)
chr2 (271-349)||(16075081-16075158)
chr2 (152-229)||(5671478-5671555)
chr2 (270-349)||(8386778-8386857)
chr2 (270-349)||(768581-768659)
chr2 (270-349)||(1576732-1576810)
chr2 (270-349)||(13002059-13002137)
chr2 (270-349)||(37169635-37169713)
chr2 (300-349)||(39906363-39906412)
chr2 (300-349)||(44542913-44542962)
chr2 (270-334)||(18370326-18370389)
chr2 (301-349)||(20939803-20939851)
chr2 (301-349)||(39904719-39904767)
chr2 (270-349)||(42850095-42850173)
chr2 (303-349)||(16513140-16513186)
chr2 (300-346)||(17265353-17265399)
chr2 (300-349)||(2586445-2586494)
chr2 (300-349)||(9690251-9690300)
chr2 (300-349)||(33173563-33173612)
chr2 (301-349)||(22302071-22302119)
chr2 (155-231)||(41890197-41890273)
chr2 (300-343)||(22711132-22711175)
chr2 (301-340)||(44257523-44257562)
chr2 (271-337)||(29403983-29404048)
chr2 (270-349)||(29512112-29512192)
chr2 (300-333)||(4293313-4293346)
chr2 (304-349)||(6332369-6332414)
chr2 (300-349)||(7682098-7682146)
chr2 (300-349)||(9689469-9689518)
chr2 (79-155)||(31911140-31911219)
chr2 (270-334)||(41527932-41527996)
chr2 (300-340)||(324990-325030)
chr2 (103-155)||(1729539-1729591)
[»] scaffold0418 (1 HSPs)
scaffold0418 (270-349)||(5720-5798)
[»] scaffold0015 (1 HSPs)
scaffold0015 (270-349)||(9814-9892)
[»] chr3 (47 HSPs)
chr3 (270-341)||(3800223-3800294)
chr3 (270-349)||(31039644-31039722)
chr3 (270-349)||(50801601-50801679)
chr3 (270-349)||(50874201-50874279)
chr3 (270-349)||(1376085-1376163)
chr3 (270-349)||(27317666-27317744)
chr3 (270-349)||(32203180-32203258)
chr3 (270-349)||(53467438-53467516)
chr3 (276-349)||(17605506-17605578)
chr3 (270-349)||(8814805-8814883)
chr3 (270-349)||(12127568-12127646)
chr3 (270-349)||(13349162-13349240)
chr3 (270-349)||(53581586-53581664)
chr3 (272-349)||(27360025-27360100)
chr3 (81-155)||(51877320-51877396)
chr3 (274-349)||(33837897-33837971)
chr3 (270-333)||(48765316-48765378)
chr3 (270-349)||(50913087-50913165)
chr3 (300-349)||(6748733-6748782)
chr3 (300-349)||(7848589-7848638)
chr3 (271-347)||(3269398-3269473)
chr3 (301-349)||(6109248-6109296)
chr3 (300-343)||(994811-994854)
chr3 (303-349)||(22894633-22894679)
chr3 (300-349)||(6114843-6114892)
chr3 (300-349)||(11460212-11460261)
chr3 (300-349)||(21727707-21727756)
chr3 (300-349)||(26158316-26158365)
chr3 (301-349)||(7521421-7521469)
chr3 (305-349)||(51952269-51952313)
chr3 (300-343)||(4043690-4043733)
chr3 (300-335)||(17226272-17226307)
chr3 (271-349)||(26103704-26103779)
chr3 (152-207)||(50420655-50420710)
chr3 (152-227)||(50673032-50673107)
chr3 (182-240)||(50173456-50173514)
chr3 (300-349)||(37504603-37504652)
chr3 (300-349)||(38798040-38798089)
chr3 (300-349)||(47461756-47461805)
chr3 (305-349)||(995111-995155)
chr3 (301-349)||(2868247-2868295)
chr3 (305-349)||(3544356-3544400)
chr3 (104-155)||(4298392-4298444)
chr3 (103-155)||(29213362-29213414)
chr3 (270-349)||(29239679-29239758)
chr3 (270-346)||(36823982-36824057)
chr3 (301-349)||(45059616-45059664)
[»] chr1 (61 HSPs)
chr1 (270-349)||(463393-463471)
chr1 (270-349)||(16005601-16005679)
chr1 (270-349)||(26843078-26843156)
chr1 (273-349)||(28454745-28454820)
chr1 (270-349)||(6192506-6192584)
chr1 (270-349)||(8643033-8643111)
chr1 (270-349)||(13264568-13264646)
chr1 (270-349)||(34515211-34515289)
chr1 (270-349)||(36389539-36389617)
chr1 (270-349)||(5491682-5491760)
chr1 (270-349)||(27787881-27787959)
chr1 (270-349)||(32156020-32156098)
chr1 (271-346)||(51431884-51431958)
chr1 (270-349)||(34306520-34306602)
chr1 (270-343)||(13157646-13157718)
chr1 (270-334)||(32994266-32994329)
chr1 (270-349)||(158495-158573)
chr1 (270-349)||(3979458-3979536)
chr1 (270-349)||(16073520-16073598)
chr1 (270-349)||(24770710-24770788)
chr1 (270-349)||(50559330-50559408)
chr1 (271-349)||(3273370-3273447)
chr1 (271-349)||(4158188-4158265)
chr1 (300-349)||(14387480-14387529)
chr1 (300-349)||(32151946-32151995)
chr1 (300-343)||(27389543-27389586)
chr1 (270-349)||(42199890-42199968)
chr1 (270-349)||(42208758-42208836)
chr1 (270-349)||(45818818-45818896)
chr1 (300-349)||(1805044-1805093)
chr1 (152-228)||(12381150-12381224)
chr1 (152-228)||(12385217-12385291)
chr1 (300-349)||(20411277-20411326)
chr1 (300-349)||(39424348-39424397)
chr1 (270-347)||(41146287-41146363)
chr1 (300-349)||(43236242-43236291)
chr1 (270-335)||(47130803-47130867)
chr1 (301-349)||(13157363-13157411)
chr1 (152-208)||(27935102-27935158)
chr1 (152-208)||(34429744-34429800)
chr1 (305-349)||(47130976-47131020)
chr1 (154-205)||(40289067-40289118)
chr1 (271-349)||(14387335-14387411)
chr1 (303-349)||(32144131-32144177)
chr1 (304-349)||(12864352-12864397)
chr1 (300-349)||(13385790-13385839)
chr1 (300-349)||(14494449-14494498)
chr1 (300-349)||(16960362-16960411)
chr1 (304-349)||(27255732-27255777)
chr1 (300-349)||(32144072-32144121)
chr1 (300-349)||(32716462-32716511)
chr1 (155-240)||(44359755-44359840)
chr1 (304-349)||(50797743-50797788)
chr1 (300-349)||(52772326-52772375)
chr1 (300-340)||(13943351-13943391)
chr1 (305-349)||(23413706-23413750)
chr1 (103-155)||(27935021-27935073)
chr1 (305-349)||(32152005-32152049)
chr1 (103-167)||(32268052-32268116)
chr1 (152-204)||(36596554-36596606)
chr1 (301-349)||(36817730-36817778)
[»] scaffold0627 (1 HSPs)
scaffold0627 (270-349)||(4097-4174)
[»] scaffold0217 (1 HSPs)
scaffold0217 (270-349)||(20701-20779)
[»] scaffold0325 (1 HSPs)
scaffold0325 (270-349)||(6576-6654)
[»] scaffold0068 (1 HSPs)
scaffold0068 (300-349)||(57961-58010)
[»] scaffold1808 (1 HSPs)
scaffold1808 (270-349)||(601-679)
[»] scaffold0119 (2 HSPs)
scaffold0119 (300-341)||(2796-2837)
scaffold0119 (300-341)||(14851-14892)
[»] scaffold0002 (1 HSPs)
scaffold0002 (300-349)||(452448-452497)
[»] scaffold0074 (1 HSPs)
scaffold0074 (301-349)||(26134-26182)


Alignment Details
Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 12349665 - 12349765
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataacccttaaaataaagggtaaagata 251  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||    
T  12349665 aaaattgttgaattcattgcaaacttaccattttttatttccttaactagtgccctgagggcac-cgtaagtataacccttaaaataaagggtaaagata 12349763  T
Q  252 tg 253  Q
    ||    
T  12349764 tg 12349765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 31752138 - 31752216
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31752138 ctttttagttataacttgctaaaacacac-cttctaaaaaataaatgggtgtattctagcaaatgcctataggagttgct 31752216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 7944310 - 7944388
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  7944310 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 7944388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 25912202 - 25912124
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  25912202 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 25912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 33696075 - 33696153
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||| |||||||||  || |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  33696075 ctttttagttataacatgctaaaacataa-cttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 33696153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 12349518 - 12349598
Alignment:
Q  76 aataagggaaatgctaaagagcctttagg-cattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaa 155  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| || ||| | |||||||||||||    
T  12349518 aataagggaaatgctaaagagcccttagggcattggttaagaggacaaatttaaaaatgttgtatatgaaaatggtgaaaa 12349598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 17421716 - 17421791
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagtt 346  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  17421716 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgtctataggagtt 17421791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 3038909 - 3038987
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  3038909 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgct 3038987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 4083760 - 4083838
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  4083760 ctttttagttataacttgttaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 4083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 12910182 - 12910104
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||| |||||||||  | | ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  12910182 ctttttagttataacatgctaaaacataca-ttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 12910104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 14369789 - 14369867
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  14369789 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 14369867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 31240404 - 31240326
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||| ||||||||    
T  31240404 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataagagttgct 31240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 28747785 - 28747862
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| || | ||||||||| ||| ||||||||||||||||||||  |||||||||||||    
T  28747785 tttttagttataacttgctaaaacacaca-ttctaaaaattaagtgggtgtattctagcaaatgtctataggagttgct 28747862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 17233074 - 17232998
Alignment:
Q  272 ttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||| |||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  17233074 ttttagttataatttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 17232998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 4737954 - 4738032
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||| |||||||||||  ||| ||||||||    
T  4737954 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcctagcaaatgcccatatgagttgct 4738032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 8410778 - 8410700
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| | | ||||| |||||||||| ||||||||||||||    
T  8410778 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagttgatgtatcctagcaaatgtttataggagttgct 8410700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 22701903 - 22701826
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | ||||  |||||||| |||||||||||||||||||||||||| ||||||||    
T  22701903 ctttttagttataacttgctaaaacac-accttc-caaaaataagtgggtgtattctagcaaatgcttataagagttgct 22701826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 39549000 - 39548922
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||  ||||| |||||||    
T  39549000 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatggctatagaagttgct 39548922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 6436445 - 6436523
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| |||||||||||||| ||  |||||||||||||| | |||| || ||||||||||| |||||||||||||    
T  6436445 ctttttagttgtaacttgctaaaacacac-cttctaaaaaataagtaggtgaatcctagcaaatgcctataggagttgct 6436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 17233432 - 17233354
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| |||||| ||| |||||| ||| |||||||||||||| || |||| ||||||||||||| |||||||||||||    
T  17233432 ctttttaattataatttggtaaaacacaa-cttctaaaaaataagtgagtgtgttctagcaaatgcctataggagttgct 17233354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 39038541 - 39038619
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| ||  |||||||||||||| ||||| ||| ||||||||||| |||||||||||||    
T  39038541 ctttttagttataatttgttaaaacacac-cttctaaaaaataagtgggtatatcctagcaaatgcatataggagttgct 39038619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 6261150 - 6261073
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| ||||||||||||||||| ||  |||||||||||||| ||||| ||| ||||||||||  |||||||||||||    
T  6261150 tttttaattataacttgctaaaacacac-cttctaaaaaataagtgggtatatcctagcaaatgtctataggagttgct 6261073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 9124725 - 9124801
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttg 347  Q
    |||||||||||||||||||||||| || | |||||||||| ||| ||| ||||||||||||||||| ||||| |||||    
T  9124725 tttttagttataacttgctaaaacacaca-ttctaaaaaaataagtggatgtattctagcaaatgcctatagaagttg 9124801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 15809026 - 15809075
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  15809026 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 15809075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 30688046 - 30687997
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  30688046 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 30687997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 37249361 - 37249406
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  37249361 taaaaaataaatgggtgtattctagcaaatgcctataggatttgct 37249406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 2528789 - 2528868
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||| ||||||||||||||||||| ||  ||||||||||| ||| ||| ||||||||||||||||  |||||||||||||    
T  2528789 cttttcagttataacttgctaaaacacac-cttctaaaaaaataagtggatgtattctagcaaatgtctataggagttgct 2528868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 2695255 - 2695178
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | |||||||||  ||| ||||| ||| ||||||||||| |||||||||||||    
T  2695255 ctttttagttataacttgctaaaacac-accttctaaaatgtaagtgggt-tatcctagcaaatgcctataggagttgct 2695178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 10951077 - 10951155
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||| |||||||||||||||| ||  ||| |||||||||| | |||||||| || ||||||| |||||||||||||    
T  10951077 ctttttagatataacttgctaaaacacac-cttataaaaaataagtaggtgtattatatcaaatgcctataggagttgct 10951155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 350
Target Start/End: Complemental strand, 17210004 - 17209957
Alignment:
Q  303 ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgctt 350  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  17210004 ctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctt 17209957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 22800801 - 22800723
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| ||  ||| |||||||||| ||||||||||||||||||||  | |||||||||||    
T  22800801 ctttttagttataatttgttaaaacacac-cttttaaaaaataagtgggtgtattctagcaaatgtctgtaggagttgct 22800723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 33026283 - 33026333
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgctt 350  Q
    |||||||||||||| | ||||||||||||||||||| ||||||| ||||||    
T  33026283 cttctaaaaaataagtcggtgtattctagcaaatgcctataggatttgctt 33026333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 3960769 - 3960720
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| | ||||| |||||    
T  3960769 cttctaaaaaataagtgggtgtattctagcaaatgcatgtaggatttgct 3960720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 17605096 - 17605145
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||| |||||    
T  17605096 cttctaaaaaataagtgggtgtattccagcaaatgcctataggatttgct 17605145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 29302236 - 29302187
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  29302236 cttctaaaaaataagcgggtgtattctagcaaatgcctataggatttgct 29302187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 349
Target Start/End: Complemental strand, 13711185 - 13711114
Alignment:
Q  278 ttataacttgctaaaacccaaacttctaaaaaataaa-tgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| |  | ||| |||||| ||| ||||||||||||||||||||| |||||||||||||    
T  13711185 ttataacttgctaaaacactca-ttcaaaaaaaaaaagtgggtgtattctagcaaatgcctataggagttgct 13711114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 33832738 - 33832817
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaa-aataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | |||| |||| ||||| ||||||  ||||| ||||||| |||||||||||||    
T  33832738 ctttttagttataacttgctaaaacac-accttccaaaacaataagtgggtgcgttctaacaaatgcctataggagttgct 33832817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 41871877 - 41871929
Alignment:
Q  105 cattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaatt 157  Q
    |||||||||| || |||||||||||||| || |||| ||||||||||||||||    
T  41871877 cattggttaagagcacaaatttaaaaatgttgtattaaaaaatggtgaaaatt 41871929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 950666 - 950616
Alignment:
Q  182 ttttttgtttccttaactagtgcccttagggcactagttagtataaccctt 232  Q
    |||||||  ||||||||||||||||| |||||||| ||||| |||||||||    
T  950666 ttttttgaatccttaactagtgccctaagggcacttgttagcataaccctt 950616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 4736850 - 4736896
Alignment:
Q  303 ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  4736850 ctaaaaaataagtggatgtattctagcaaatgcctataggatttgct 4736896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 10471017 - 10471094
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| || ||||||||| | || |||||||| |||| |||||||||| ||||||||| || | |||||||||    
T  10471017 tttttagttatgacatgctaaaacactaa-ttctaaaacataagtgggtgtattttagcaaatgtttgtgggagttgct 10471094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 40234216 - 40234170
Alignment:
Q  303 ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| |||| ||||||||| ||||||||||| |||||||||||||    
T  40234216 ctaaaacataagtgggtgtatcctagcaaatgcctataggagttgct 40234170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 12349493 - 12349530
Alignment:
Q  21 agaatacgaacctagtcaagttatgaataagggaaatg 58  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  12349493 agaatacgaacctagtcaagctataaataagggaaatg 12349530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 38661242 - 38661283
Alignment:
Q  308 aaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| ||||||||||||||||||||| ||||||| |||||    
T  38661242 aaataagtgggtgtattctagcaaatgcctataggatttgct 38661283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 26905956 - 26906000
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  26905956 aaaaaataagtggctgtattctagcaaatgcctataggatttgct 26906000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 31752485 - 31752552
Alignment:
Q  281 taacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||| ||  || |||||||||||| |||| || |||||||||||| ||||||||    
T  31752485 taacttgctaaaacacaaa-ttgaaagaaataaatgggtatattataacaaatgcttataagagttgct 31752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 33282312 - 33282360
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| |||||| |||||||||||||| ||| ||| |||||    
T  33282312 ttctaaaaaataagtgggtgcattctagcaaatgcctattggatttgct 33282360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13269270 - 13269348
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  13269270 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgtttataggagttgct 13269348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 27545920 - 27545842
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  27545920 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgct 27545842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 10616450 - 10616373
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  10616450 tttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 10616373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 36899897 - 36899821
Alignment:
Q  272 ttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  36899897 ttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcgtataggagttgct 36899821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 32069179 - 32069104
Alignment:
Q  273 tttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  32069179 tttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 32069104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13468337 - 13468415
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||| | ||  |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  13468337 ctttttagttataacttgctaaagcacac-cttctaaaaaataagtgggtgtattatagcaaatgcctataggagttgct 13468415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 30633101 - 30633179
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||| | ||| |||||||    
T  30633101 ctttttagttataacttgctaaaacacac-cttctaaaaattaaatgggtgtattctagcaaatgcatgtagaagttgct 30633179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 35550628 - 35550706
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| || |||||| ||||||||||| |||||||||||||    
T  35550628 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgagtgtatcctagcaaatgcctataggagttgct 35550706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 26042977 - 26043053
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||| ||||||||||| |||||||||||    
T  26042977 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttg 26043053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 8258358 - 8258436
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| ||||||| |||||||||| |   |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  8258358 ctttttggttataatttgctaaaacactt-cttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 8258436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 29125746 - 29125824
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||| ||||||||  ||||||||| ||||||||||| |||||||||||||    
T  29125746 ctttttagttataacttgctaaaacacac-cttccaaaaaataggtgggtgtatcctagcaaatgcctataggagttgct 29125824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 30207327 - 30207249
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| |||||| |||||||||| ||  ||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  30207327 ctttttaattataatttgctaaaacacactctt-taaaaaataagtgggtgtattctagcaaatgcctataggagttgct 30207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 32486963 - 32487041
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||  ||   ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  32486963 ctttttagttataacttgctaaaatacact-ttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 32487041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 9483957 - 9484034
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| |||  || |||||||||||||||||||||    
T  9483957 tttttagttataacttgctaaaacacat-cttctaaaaaataagtgggtatatcttaacaaatgcttataggagttgct 9484034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 1281922 - 1281998
Alignment:
Q  272 ttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||| ||||||||| ||||||| ||||| |||||||    
T  1281922 ttttagttataacttgctaaaacacac-cttctaaaaaataagtggatgtattctaccaaatgcctatagaagttgct 1281998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 39934439 - 39934515
Alignment:
Q  272 ttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||| |||||| ||  |||||||||||||| | ||||||||||||||||||| | |||||||||||    
T  39934439 ttttagttataacttgttaaaacacac-cttctaaaaaataagttggtgtattctagcaaatgcctgtaggagttgct 39934515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 3369871 - 3369794
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  | | | |||||||| ||||||||| ||||||||||| |||||||||||||    
T  3369871 ctttttagttataacttgctaaaacaca--ccttttaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 3369794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 14826358 - 14826406
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  14826358 ttctaaaaaataagtgggtgtattctagcaaatgcttataggatttgct 14826406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 1201829 - 1201751
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| ||  ||||||||| |||| ||||||||| ||||||||||| |||||||||||||    
T  1201829 ctttttagttataatttgttaaaacacac-cttctaaaatataagtgggtgtatcctagcaaatgcctataggagttgct 1201751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 2823638 - 2823716
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||   ||||||||||||| ||| ||||| ||||||||||  |||||||||||||    
T  2823638 ctttttagttataacttgctaaaacacact-ttctaaaaaataagtggatgtatcctagcaaatgtctataggagttgct 2823716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 5946823 - 5946900
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | |||||||||||||| | ||||||| |||||||||||  ||||||||||||    
T  5946823 ctttttagttataacttgctaaaacac-atcttctaaaaaataagt-ggtgtatcctagcaaatgccgataggagttgct 5946900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 23544832 - 23544906
Alignment:
Q  274 ttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||| ||  |||||||||||||| ||||||||||||| ||||||  |||||||||||||    
T  23544832 ttagttataacttactaaaacacac-cttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgct 23544906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 25123538 - 25123460
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| ||  ||| |||||||||| ||||||||||||||||||||  |||||| ||||||    
T  25123538 ctttttagttataacttgttaaaacacac-cttttaaaaaataagtgggtgtattctagcaaatgtctataggcgttgct 25123460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 10777133 - 10777058
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||     ||||||||||| ||| |||||  ||||||||||||||||||||||||    
T  10777133 ctttttagttataacttgctaaaacacac----ctaaaaaataagtggatgtatcttagcaaatgcttataggagttgct 10777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 34103159 - 34103082
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||| |||||  ||||||| || ||||| |||||||    
T  34103159 tttttagttataacttgctaaaacacac-cttctaaaaaataaatggatgtatcatagcaaaagcctatagaagttgct 34103082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 1783133 - 1783084
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  1783133 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 1783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 9483780 - 9483731
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  9483780 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 9483731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 21442416 - 21442465
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  21442416 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 21442465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 22575765 - 22575853
Alignment:
Q  153 aaattgttgaattcattgcaaacttatc-attttttgtttccttaactagtgcccttagggcactagttagtataacccttaaaataaa 240  Q
    ||||||||||||||| |||||||||  | |||| | ||||||||||| |||||||| |||||||| ||||| |||||||| ||| ||||    
T  22575765 aaattgttgaattcaatgcaaactttactatttctagtttccttaacaagtgccctaagggcactggttagcataaccctaaaattaaa 22575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 13290656 - 13290578
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | |||||||||| ||| ||| ||||||||| ||||||| | || ||||||||    
T  13290656 ctttttagttataacttgctaaaacac-accttctaaaaattaagtggatgtattctaacaaatgcatgtaagagttgct 13290578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 19971497 - 19971540
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  19971497 cttctaaaaaataagtgggtgtattctagcaaatgcctatagga 19971540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 21021316 - 21021273
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  21021316 cttctaaaaaataagtgggtgtattctagcaaatgcctatagga 21021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 25128031 - 25127953
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | |||||||||| ||| || | |||||||||||||||  | |||||||||||    
T  25128031 ctttttagttataacttgctaaaacac-accttctaaaaattaagtgagagtattctagcaaatgtctgtaggagttgct 25127953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 26867959 - 26868037
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||| |||||||||||||||| ||  |||||| ||||||| ||||||| || ||| |||||| |||||||||||||    
T  26867959 ctttttagatataacttgctaaaacacac-cttctagaaaataagtgggtgtgttatagtaaatgcctataggagttgct 26868037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 45299625 - 45299702
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| |||||| |||||||||| ||  |||| ||||||||| ||||||||| ||||||||||| |||| ||||||||    
T  45299625 tttttaattataatttgctaaaacacac-cttcaaaaaaataagtgggtgtatcctagcaaatgcctataagagttgct 45299702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 31071684 - 31071635
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  31071684 cttctaaaaaataagttggtgtattctagcaaatgcctataggatttgct 31071635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 35237063 - 35237104
Alignment:
Q  162 aattcattgcaaacttatcattttttgtttccttaactagtg 203  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  35237063 aattcaatgcaaacttatcattttttgttttcttaactagtg 35237104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 42556822 - 42556758
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgc 335  Q
    ||||||||||||||||||||||||| || | ||| ||||||||| || |||||| |||||||||||    
T  42556822 ctttttagttataacttgctaaaacacaca-ttcaaaaaaataagtgagtgtatcctagcaaatgc 42556758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 39972235 - 39972291
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgccctt 208  Q
    ||||||||| |||||| ||||||| ||  |||||| |||||||||||||||||||||    
T  39972235 aaaattgttcaattcaatgcaaacatactatttttggtttccttaactagtgccctt 39972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 9413968 - 9413890
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| |||||||||||||||||  |  ||| |||||||||| | | ||||||||||||||||  |||||||||||||    
T  9413968 ctttttaattataacttgctaaaacatac-cttttaaaaaataagtagatgtattctagcaaatgtctataggagttgct 9413890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 23161355 - 23161405
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgt 321  Q
    ||||||||||||||||||||||||| || | ||||||||||||| |||||||    
T  23161355 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgt 23161405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 5074857 - 5074808
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactag 201  Q
    |||||||||||||||| ||||||||||  |||||| ||||| ||||||||    
T  5074857 aaaattgttgaattcagtgcaaacttactatttttagtttctttaactag 5074808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 21352298 - 21352347
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||||||| ||||| ||||||| || |||||||    
T  21352298 cttctaaaaaataagtgggtgtattatagcatatgcttacagaagttgct 21352347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 35067159 - 35067083
Alignment:
Q  273 tttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||| | ||  ||||||||||| ||| |||| |||||||||||||| | || ||||||||||    
T  35067159 tttagttataacttgctaaagcacac-cttctaaaaaaataagtgggcgtattctagcaaatacctaaaggagttgct 35067083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 43351978 - 43351933
Alignment:
Q  193 cttaactagtgcccttagggcactagttagtataacccttaaaata 238  Q
    ||||||| ||||||||||||||| |||||| || ||||||||||||    
T  43351978 cttaacttgtgcccttagggcacaagttagcatgacccttaaaata 43351933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 18352474 - 18352396
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  18352474 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 18352396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 25818522 - 25818600
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  25818522 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 25818600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 41407380 - 41407458
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||   ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  41407380 ctttttagttataacttgctaaaacacact-ttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 41407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 938933 - 939011
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  938933 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 939011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 2936678 - 2936756
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||  ||||||||||||    
T  2936678 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgccaataggagttgct 2936756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 11766159 - 11766237
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||| ||||||||    
T  11766159 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcatataagagttgct 11766237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 28912120 - 28912198
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||  ||||||||||||    
T  28912120 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcccataggagttgct 28912198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 2509478 - 2509403
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||||||||||||||||||||| ||  |||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  2509478 ctttttagttataacttgctaaaacacac-cttctaaaaa-taagtgggtgtattctagcaaatgcatataggagttg 2509403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 38368014 - 38367938
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||    
T  38368014 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtggctgtattctagcaaatgcctataggagttg 38367938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 9401814 - 9401736
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| ||||||| ||||||||| ||  | |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  9401814 ctttttaattataacatgctaaaacacac-catctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 9401736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 41037396 - 41037474
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | |||| ||| |||| |||||||||| |||||||||| |||||||||||||    
T  41037396 ctttttagttataacttgctaaaacacaca-ttcttaaatataactgggtgtattttagcaaatgcctataggagttgct 41037474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 454142 - 454220
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| ||||||||||||  ||  |||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  454142 ctttttagttaaaacttgctaaaatacac-cttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgct 454220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 2634048 - 2633973
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| |||||||||||||||||| ||     ||||||||||| | ||||||||||||||||||| |||||||||||||    
T  2634048 ctttttggttataacttgctaaaacacac----ctaaaaaataagtaggtgtattctagcaaatgcctataggagttgct 2633973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 19069435 - 19069512
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| ||||||||||||||||| || | ||||||||||||| ||||||||| |||||||||   |||||||||||||    
T  19069435 tttttaattataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcctagcaaatagctataggagttgct 19069512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 38796981 - 38796904
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| |||||| ||  ||| ||||||||||  |||||||||||||||||||  |||||||||||||    
T  38796981 tttttagttataacttgttaaaacacac-cttttaaaaaataagcgggtgtattctagcaaatgtctataggagttgct 38796904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 14770143 - 14770192
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  14770143 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 14770192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 15220594 - 15220643
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  15220594 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 15220643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 20516988 - 20517037
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  20516988 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 20517037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 24720329 - 24720378
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  24720329 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 24720378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 32577615 - 32577660
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||    
T  32577615 taaaaaataagtgggtgtattctagcaaatgcttataggatttgct 32577660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 38876297 - 38876248
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  38876297 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 38876248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 45225328 - 45225377
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  45225328 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 45225377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 6736669 - 6736590
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| ||  ||||||||||| ||| | ||||||||||||||||||| |||||||||||||    
T  6736669 ctttttagttataatttgttaaaacacac-cttctaaaaaaataagtaggtgtattctagcaaatgcctataggagttgct 6736590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 12080768 - 12080816
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  12080768 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 12080816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 23740076 - 23740155
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| ||  ||||||||||| ||| | ||||||||||| ||||||| |||||||||||||    
T  23740076 ctttttagttataacttgttaaaacacac-cttctaaaaaaataagtaggtgtattctaacaaatgcctataggagttgct 23740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 2362790 - 2362865
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||||||||||| ||     ||||||||||| ||||||||| ||||||||||  |||||||||||||    
T  2362790 ctttttagtgataacttgctaaaacacac----ctaaaaaataagtgggtgtatcctagcaaatgtctataggagttgct 2362865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 7437927 - 7437885
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  7437927 ttctaaaaaataattgggtgtattctagcaaatgcctatagga 7437885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 15957372 - 15957295
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttct-aaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||||||||||||||||||||| | | ||||| ||||||||| | ||||||| ||||||||||  |||||||||||    
T  15957372 ctttttagttataacttgctaaaacac-accttctaaaaaaataagttggtgtatcctagcaaatgtctataggagttg 15957295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 4655113 - 4655162
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| |||||||||| |||||||||||||||||| |||||    
T  4655113 cttctaaaaactaagtgggtgtattttagcaaatgcttataggatttgct 4655162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 6559395 - 6559471
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    |||||||||||||||||||||||||  | | ||||| |||||||  ||||||||| |||||||||| |||| ||||||    
T  6559395 ctttttagttataacttgctaaaacataca-ttctataaaataagcgggtgtattatagcaaatgcctatatgagttg 6559471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 14719123 - 14719074
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||| |||||    
T  14719123 cttctaaaaaataagtgggtgtattccagcaaatgcctataggatttgct 14719074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 14777995 - 14778044
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  14777995 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 14778044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 15230133 - 15230182
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  15230133 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 15230182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 27168306 - 27168355
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  27168306 cttctaaaaaataagtgggtgtatcctaccaaatgcctataggagttgct 27168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 27168411 - 27168359
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtat 323  Q
    ||||||||||||||||||||||||| | | |||||||||||||| |||||||||    
T  27168411 ctttttagttataacttgctaaaacac-accttctaaaaaataagtgggtgtat 27168359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 27812010 - 27812059
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| || |||| |||||    
T  27812010 cttctaaaaaataagtgggtgtattctagcaaatgcctacaggatttgct 27812059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 32852925 - 32852974
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  32852925 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 32852974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 37848327 - 37848380
Alignment:
Q  103 ggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaat 156  Q
    |||||||||||| |||||||| ||||||||||| ||||  ||||||||||||||    
T  37848327 ggcattggttaagaggacaaacttaaaaatattgtattggaaaatggtgaaaat 37848380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 45225461 - 45225502
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  45225461 cttctaaaaaataagtgggtgtattctagcaaatgcctatag 45225502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 48193221 - 48193270
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  48193221 cttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgct 48193270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 48454674 - 48454625
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  48454674 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 48454625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 34986594 - 34986642
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  34986594 ttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgct 34986642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 22479274 - 22479317
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||||||||||||||||||||  |||||||    
T  22479274 cttctaaaaaataagtgggtgtattctagcaaatgtatatagga 22479317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 8048098 - 8048064
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatg 334  Q
    |||||||||||||| ||||||||||||||||||||    
T  8048098 cttctaaaaaataagtgggtgtattctagcaaatg 8048064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 11327664 - 11327713
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  11327664 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 11327713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 18123211 - 18123162
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  18123211 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 18123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 28605510 - 28605543
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaat 333  Q
    |||||||||||||| |||||||||||||||||||    
T  28605510 cttctaaaaaataagtgggtgtattctagcaaat 28605543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 3512762 - 3512711
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgta 322  Q
    ||||||||||||||||| ||||||| | | |||||||||||||| ||||||||    
T  3512762 ctttttagttataacttactaaaacac-atcttctaaaaaataagtgggtgta 3512711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 33730555 - 33730633
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  33730555 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 33730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 26539138 - 26539054
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataacccttaaaa 236  Q
    |||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||| |||||||||  |||||||| ||||    
T  26539138 aaaattgttgaattcaatgcaaacttactatttttagtttccttaactagtgcccttaggacactagttaacataaccctaaaaa 26539054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 4898605 - 4898527
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  4898605 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 4898527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 14488332 - 14488410
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  14488332 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgcctatatgagttgct 14488410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 11100090 - 11100169
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | |||||||||| ||| |||||| |||||||||||||| |||||||||||||    
T  11100090 ctttttagttataacttgctaaaacacaca-ttctaaaaaaataagtgggtgcattctagcaaatgcatataggagttgct 11100169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 4898286 - 4898208
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| ||   |  |||||||||| || |||||||||||||||||| |||||||||||||    
T  4898286 tttttagttataacttgctaaaacacaccttaataaaaaataagtgagtgtattctagcaaatgcctataggagttgct 4898208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 30525513 - 30525435
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaactt-ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||  | |||| ||||||||||| || |||||||||||||||||| |||||||||||||    
T  30525513 ctttttagttataatttgctaaaac--atactttctaaaaaataagtgagtgtattctagcaaatgcctataggagttgct 30525435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 25061688 - 25061766
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| ||  ||||||| |||||| | ||||||| ||||||||||| |||||||||||||    
T  25061688 ctttttagttataacttgttaaaacacac-cttctaacaaataagttggtgtatcctagcaaatgcctataggagttgct 25061766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 11742357 - 11742434
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||| ||  |||  ||||| ||||||||||||| ||||||||||| |||||||||||||    
T  11742357 tttttagttataacctgctaaaacacac-ctttaaaaaattaaatgggtgtatcctagcaaatgcctataggagttgct 11742434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 29646282 - 29646331
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  29646282 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 29646331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 31133008 - 31132959
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  31133008 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 31132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 9955926 - 9955878
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  9955926 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 9955878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 18102725 - 18102800
Alignment:
Q  273 tttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||  || | ||||||||||||| |||||||||  |||||||||| ||||| |||||||    
T  18102725 tttagttataacttgctaaaatacaca-ttctaaaaaataagtgggtgtatcatagcaaatgcctatagaagttgct 18102800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 15718242 - 15718320
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| ||  ||||||||| |||| ||| ||||||||| ||||||| |||||||||||||    
T  15718242 ctttttagttataatttgttaaaacacac-cttctaaaatataagtggatgtattctaacaaatgcctataggagttgct 15718320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 3438152 - 3438076
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||| ||||||||||||||||| || | ||||||||||||| ||||| ||| || |||||||| |||| ||||||    
T  3438152 ctttttaattataacttgctaaaacacaca-ttctaaaaaataagtgggtatatccttgcaaatgcctataagagttg 3438076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 4184391 - 4184342
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  4184391 cttctaaaaaataagttggtgtattctagcaaatgcctataggatttgct 4184342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 8171942 - 8171991
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  8171942 cttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgct 8171991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 4838310 - 4838361
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtat 323  Q
    |||||||||||||||||||||||| || | ||||||||||||| |||||||||    
T  4838310 tttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtat 4838361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 27828442 - 27828394
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  27828442 ttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgct 27828394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 1370030 - 1369987
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  1370030 cttctaaaaaataaatggatgtattctagcaaatgtctatagga 1369987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 16599201 - 16599158
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| |||||||||||||| |||||| |||||||    
T  16599201 cttctaaaaaataagtgggtgtattctagtaaatgcctatagga 16599158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 31490773 - 31490824
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtg 203  Q
    |||||||||||||||| | ||||||||  |||||| ||||||||||||||||    
T  31490773 aaaattgttgaattcaatacaaacttactatttttagtttccttaactagtg 31490824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 18154579 - 18154656
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||| |||||||||||||||||| ||  | |||| ||||||| ||||||||| ||| ||||||  |||||||||||||    
T  18154579 ttttttgttataacttgctaaaacacac-cgtctataaaataagtgggtgtatcctaacaaatgtctataggagttgct 18154656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 5187899 - 5187866
Alignment:
Q  302 tctaaaaaataaatgggtgtattctagcaaatgc 335  Q
    |||||||||||| |||||||||||||||||||||    
T  5187899 tctaaaaaataagtgggtgtattctagcaaatgc 5187866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 9406649 - 9406694
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||| ||||| ||||||||||||||||||||| ||||||| |||||    
T  9406649 taaacaataagtgggtgtattctagcaaatgcatataggaattgct 9406694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 11100512 - 11100463
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  11100512 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 11100463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 21970053 - 21969977
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    |||||||||||||||||| |||||  ||  ||| |||||||||| | | |||||||||||||||| ||||| ||||||    
T  21970053 ctttttagttataacttgttaaaatacac-cttataaaaaataagtagatgtattctagcaaatgtttataagagttg 21969977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 26667997 - 26667956
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  26667997 cttctaaaaaataagtgggtgtattctaacaaatgcctatag 26667956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 15962868 - 15962828
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    ||||||||||||| |||||||||||||| |||||| |||||    
T  15962868 ttctaaaaaataagtgggtgtattctagaaaatgcctatag 15962828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 38425824 - 38425746
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  38425824 ctttttagttataacttgctaaaacacaca-ttctaaaaaataaatgggtgtgttctagcaaatgcctataggagttgct 38425746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 6137671 - 6137593
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| ||||||| ||  |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  6137671 ctttttagttataacttactaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgct 6137593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 6946684 - 6946762
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  6946684 ctttttagttataacttgctaaaacacat-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 6946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 11777668 - 11777590
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| ||||||| ||  |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  11777668 ctttttagttataacttactaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgct 11777590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 40496315 - 40496237
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  40496315 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtattctagcaaatgtctataggagttgct 40496237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 20459004 - 20458927
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  20459004 tttttagttataacttgctaaaacacat-cttctaaaaaataagtgggtatattctagcaaatgcctataggagttgct 20458927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 14863012 - 14863089
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| ||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  14863012 ctttttaattataacttgctaaaacaca--cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 14863089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 4712696 - 4712774
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| |||||||||| |||| ||||| |||||||||||||    
T  4712696 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattttagcgaatgcctataggagttgct 4712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 6193128 - 6193050
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  6193128 cttttttgttataacttgctaaaacacac-cttctaaaaaataagtgagtgtattctagcaaatgcttataggtgttgct 6193050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 9744304 - 9744226
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| ||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  9744304 ctttttatttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 9744226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 16553464 - 16553542
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||   ||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  16553464 ctttttagttataacttgctaaaacacact-ttctaaaaaataagtggatgtattctagcaaatgcctataggagttgct 16553542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 26335780 - 26335858
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  26335780 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgct 26335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 46106713 - 46106791
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||| ||||||||||| ||| |||||||||    
T  46106713 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcctagcaaatgcctattggagttgct 46106791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 15725219 - 15725296
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||| ||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  15725219 tttttagttataacttactaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 15725296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 23384092 - 23384017
Alignment:
Q  273 tttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||| |||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  23384092 tttagttataacttgttaaaacgcac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 23384017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 26958595 - 26958673
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||||||| || | ||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  26958595 ctttttagttataatttgctaaaacacaca-ttctaaaaaataagtgggtgtattctagcaaatgcctatatgatttgct 26958673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 36955396 - 36955474
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | || |||||||||| || |||||||||||||||||| |||| ||||||||    
T  36955396 ctttttagttataacttgctaaaacacaca-ttataaaaaataagtgagtgtattctagcaaatgcctatatgagttgct 36955474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 45875798 - 45875876
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||||||| || | ||| ||||||||| ||||||||| ||||||||||| |||||||||||||    
T  45875798 ctttttagttataatttgctaaaacacaca-ttcaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 45875876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 52437598 - 52437520
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||| ||||||  |||||||||||||    
T  52437598 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctaacaaatgtctataggagttgct 52437520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 29102024 - 29102100
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||| ||||||||||||||||| ||  ||| |||||||||| ||||||||| |||||||||| ||||||||||||    
T  29102024 ctttttaattataacttgctaaaacacat-cttataaaaaataagtgggtgtatcctagcaaatgtttataggagttg 29102100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 33811084 - 33811162
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||   ||||||||| ||| |||||||||| |||||||||| | |||||||||||    
T  33811084 ctttttagttataacttgctaaaacacact-ttctaaaaattaagtgggtgtattatagcaaatgcctgtaggagttgct 33811162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 49425932 - 49425854
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||||||| ||  |||||||||||||| | ||||||| ||||||||||| ||||| |||||||    
T  49425932 ctttttagttataagttgctaaaacacac-cttctaaaaaataagtaggtgtatcctagcaaatgcctatagaagttgct 49425854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 3818831 - 3818880
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||||||||||||||||| |||||||| |||||    
T  3818831 cttctaaaaaataagtgggtgtattctagcaaatgtttataggatttgct 3818880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 10216382 - 10216333
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  10216382 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 10216333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 13211902 - 13211951
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  13211902 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 13211951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 17181037 - 17181086
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  17181037 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 17181086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 43639016 - 43639072
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattcta 327  Q
    ||||||||||||||||||||||||| | | |||||||||||||| |||||||||||||    
T  43639016 ctttttagttataacttgctaaaacac-atcttctaaaaaataagtgggtgtattcta 43639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 48560085 - 48560134
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  48560085 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 48560134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 49970682 - 49970731
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  49970682 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 49970731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 54742487 - 54742563
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    |||| |||||||||||||||||||| || | |||||||| |||| |||||||||| |||||||||| |||| ||||||    
T  54742487 ctttctagttataacttgctaaaacacaca-ttctaaaatataagtgggtgtattttagcaaatgcctataagagttg 54742563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 578889 - 578841
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  578889 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 578841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 14203000 - 14202952
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  14203000 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 14202952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 30258256 - 30258208
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  30258256 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 30258208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 4490704 - 4490782
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | || ||  |||||| |||||||||| |||||||||  |||||||||||||    
T  4490704 ctttttagttataacttgctaaaacacatattt-taggaaataagtgggtgtattatagcaaatgtctataggagttgct 4490782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 21519818 - 21519861
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  21519818 cttctaaaaaataagtgggtgtattctagcaaatgcctatagga 21519861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 49606058 - 49606128
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    |||||||  |||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||    
T  49606058 ctttttatctataacttgctaaaacgcac-cttctaaaaaataagtgggtgtatcctagcaaatgcatatag 49606128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 5046771 - 5046722
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  5046771 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 5046722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 5157085 - 5157134
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||||||||||||||| || ||||||| |||||    
T  5157085 cttctaaaaaataagtgggtgtattctagcaaaggcctataggatttgct 5157134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 12584417 - 12584376
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  12584417 cttctaaaaaataagtgggtgtattctagcaaatgcctatag 12584376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 34360967 - 34361016
Alignment:
Q  182 ttttttgtttccttaactagtgcccttagggcactagttagtataaccct 231  Q
    ||||||||||||||||| | |||||| |||||||||||||| ||||||||    
T  34360967 ttttttgtttccttaaccattgccctgagggcactagttagcataaccct 34361016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 142692 - 142736
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||    
T  142692 aaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 142736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 13621444 - 13621396
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||| |||||    
T  13621444 ttctaaaaaataagtgggtgtatcctagcaaatgcctataggatttgct 13621396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 41172498 - 41172546
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  41172498 ttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgct 41172546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 43639068 - 43639116
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||| ||||||  |||||||||||||    
T  43639068 ttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgct 43639116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 349
Target Start/End: Original strand, 33105959 - 33106029
Alignment:
Q  278 ttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| ||  ||| |||||||||| |||| |||| ||||||||||  |||||||||||||    
T  33105959 ttataacttgctaaaacacac-cttttaaaaaataagtgggcgtatcctagcaaatgtctataggagttgct 33106029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 52306807 - 52306885
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| || ||| ||  |||||||||||||| | ||||||| ||||||||||  |||||||||||||    
T  52306807 ctttttagttataagttgttataacacac-cttctaaaaaataagtaggtgtatcctagcaaatgtctataggagttgct 52306885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 39418201 - 39418251
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagt 202  Q
    |||||||||||||| | | |||||||| ||||||||||||||||| |||||    
T  39418201 aaaattgttgaatttaatacaaacttaccattttttgtttccttatctagt 39418251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 51784100 - 51784050
Alignment:
Q  300 cttctaaaaaataaat-gggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| |||||    
T  51784100 cttctaaaaaataagtagggtgtattctagcaaatgcctataggatttgct 51784050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 6137537 - 6137589
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtat 323  Q
    ||||||||||||| ||||||||||| | | |||||||||||||| |||||||||    
T  6137537 ctttttagttataccttgctaaaacac-accttctaaaaaataagtgggtgtat 6137589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 6214070 - 6214119
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  6214070 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 6214119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 13371298 - 13371347
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| |||| ||| ||||||||||||||||| ||||||| |||||    
T  13371298 cttctaaaacataagtggttgtattctagcaaatgcctataggatttgct 13371347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 13381499 - 13381548
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| |||| ||| ||||||||||||||||| ||||||| |||||    
T  13381499 cttctaaaacataagtggttgtattctagcaaatgcctataggatttgct 13381548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 42808042 - 42807993
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  42808042 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 42807993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 30820614 - 30820570
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||| ||||||||||||| ||||||| |||||    
T  30820614 aaaaaataagtgggtgtcttctagcaaatgcctataggatttgct 30820570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 34082724 - 34082646
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  34082724 ctttttagttataacttgctaaaacacac-cttctaaaaaataaatgggtgtatcctagcaaatgcctataggagttgct 34082646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 29260211 - 29260300
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataacccttaaaataaagg 242  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||| ||  ||| |||||||| ||||| |||||||| ||||||||||    
T  29260211 aaaattgttgaattcaatgcgaacttatcatttttggtttccttaacttgt-acctaagggcactggttagcataaccctaaaaataaagg 29260300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 33739702 - 33739626
Alignment:
Q  272 ttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  33739702 ttttaattataacttgctaaaacacac-cttctaaaaaataagtggatgtattctagcaaatgcctataggagttgct 33739626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 11675310 - 11675231
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||||||||||| ||| ||||||||| ||||||||||| |||||||||||||    
T  11675310 ctttttagttataacttgctaaaacacac-cttctaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 11675231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 1750226 - 1750304
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| ||||||| ||  |||||||||| ||| ||||||||||||||||||||| | |||||||||||    
T  1750226 ctttttagttataacttactaaaacacac-cttctaaaaattaagtgggtgtattctagcaaatgcatgtaggagttgct 1750304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 23664906 - 23664828
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| ||  ||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  23664906 ctttttagttataatttgttaaaacacac-cttctaaaatataagtgggtgtattctagcaaatgcctataggagttgct 23664828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 16075081 - 16075158
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||| |||||| || ||||||||||    
T  16075081 tttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagtaaatgcctacaggagttgct 16075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 5671555 - 5671478
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataacc 229  Q
    |||||| ||||||| | |||||||||| |||||||| ||||||||||||||||| |||||||| | ||||| ||||||    
T  5671555 aaaattcttgaattgaatgcaaacttaccattttttatttccttaactagtgccattagggcattggttagcataacc 5671478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 8386857 - 8386778
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttct-aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||| |  | ||| | ||||||||| ||||||||||||||||||||| |||||||||||||    
T  8386857 ctttttagttataacttgctaaaa-catatcttgtaaaaaaataagtgggtgtattctagcaaatgcatataggagttgct 8386778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 768581 - 768659
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| ||  |||||||||||||| | |||||||  |||||||||| |||||||||||||    
T  768581 ctttttagttataacttgttaaaacgcac-cttctaaaaaataagttggtgtatcgtagcaaatgcctataggagttgct 768659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 1576810 - 1576732
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| || ||||||| || | ||||||||||||| |||||| || |||||||||| ||||||||||||||    
T  1576810 ctttttagttataatttcctaaaacacaca-ttctaaaaaataagtgggtgcatcctagcaaatgattataggagttgct 1576732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13002059 - 13002137
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||| |||||||||||| |   ||||||||||||||  ||||||||| |||||||||| |||||||||||||    
T  13002059 ctttttagttatcacttgctaaaacactc-cttctaaaaaataagagggtgtattttagcaaatgcctataggagttgct 13002137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 37169713 - 37169635
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||| ||||||||||  |||||||||||||||||||| |||| | ||||||    
T  37169713 ctttttagttataacttgctaaaacgcac-cttttaaaaaataagagggtgtattctagcaaatgcctatatgggttgct 37169635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 39906412 - 39906363
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  39906412 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 39906363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 44542913 - 44542962
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  44542913 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 44542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 18370389 - 18370326
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatg 334  Q
    ||||||| ||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||    
T  18370389 ctttttaattataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatg 18370326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 20939851 - 20939803
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  20939851 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 20939803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 39904719 - 39904767
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  39904719 ttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 39904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 42850173 - 42850095
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| ||   || |||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  42850173 ctttttagttataacttgttaaaacacactttt-taaaaaataagtggatgtattctagcaaatgcctataggaattgct 42850095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 16513140 - 16513186
Alignment:
Q  303 ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  16513140 ctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 16513186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 17265399 - 17265353
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagtt 346  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  17265399 cttctaaaaaataagtgggtgtattctagcaaatgtctataggagtt 17265353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 2586445 - 2586494
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  2586445 cttctaaaaaataagtaggtgtattctagcaaatgcctataggatttgct 2586494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 9690300 - 9690251
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| |||| || |||||    
T  9690300 cttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgct 9690251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 33173563 - 33173612
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  33173563 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 33173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 22302119 - 22302071
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||| |||||    
T  22302119 ttctaaacaataagtgggtgtattctagcaaatgcctataggatttgct 22302071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 41890197 - 41890273
Alignment:
Q  155 attgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataaccct 231  Q
    |||||||||| || ||||||| ||  | |||| ||||||||||| | ||||||||||||||| ||||| ||||||||    
T  41890197 attgttgaatccaatgcaaacctactacttttggtttccttaacaaatgcccttagggcacttgttagcataaccct 41890273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 22711175 - 22711132
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||    
T  22711175 cttctaaaaaataagtggatgtattctagcaaatgcctatagga 22711132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 44257523 - 44257562
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttata 340  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  44257523 ttctaaaaaataagtgggtgtattctagcaaatgcctata 44257562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 337
Target Start/End: Original strand, 29403983 - 29404048
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgctt 337  Q
    ||||||||||| | |||||||||| |  | ||||||||||||| |||||||||| ||||||||||||    
T  29403983 tttttagttatcatttgctaaaacactca-ttctaaaaaataagtgggtgtattttagcaaatgctt 29404048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 29512112 - 29512192
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttct--aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| | | |||||  ||||||||| ||||||||| |||| |||||  ||||| |||||||    
T  29512112 ctttttagttataacttgctaaaacac-accttctaaaaaaaataagtgggtgtatcctagtaaatgtctatagaagttgct 29512192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 4293346 - 4293313
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaat 333  Q
    |||||||||||||| |||||||||||||||||||    
T  4293346 cttctaaaaaataagtgggtgtattctagcaaat 4293313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 6332414 - 6332369
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||||||||||||||||||||  ||||||| |||||    
T  6332414 taaaaaataagtgggtgtattctagcaaatgtctataggatttgct 6332369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 7682146 - 7682098
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| || ||||||||||||||||||||| ||||||| |||||    
T  7682146 cttctaaaaaa-aagtgggtgtattctagcaaatgcctataggatttgct 7682098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 9689518 - 9689469
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  9689518 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 9689469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 31911140 - 31911219
Alignment:
Q  79 aagggaaatgctaaagag---cctttaggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaa 155  Q
    |||||||||| |||||||   ||||  ||||||||| || |||||||| ||||||||||| ||||  |||||||||||||    
T  31911140 aagggaaatgttaaagagagaccttatggcattggtcaagaggacaaacttaaaaatattgtattggaaaatggtgaaaa 31911219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 41527932 - 41527996
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaa-taaatgggtgtattctagcaaatg 334  Q
    |||||||||||||||||| |||||| || | |||||||||| ||| |||||||||| |||||||||    
T  41527932 ctttttagttataacttgttaaaacacaca-ttctaaaaaagtaagtgggtgtattatagcaaatg 41527996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 325030 - 324990
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttata 340  Q
    |||||||||||||| | ||||||||||||||||||| ||||    
T  325030 cttctaaaaaataagttggtgtattctagcaaatgcctata 324990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 1729591 - 1729539
Alignment:
Q  103 ggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaa 155  Q
    |||||||||||| |||||||| ||| |||| || |||| ||||||||||||||    
T  1729591 ggcattggttaagaggacaaacttagaaatgttgtattgaaaaatggtgaaaa 1729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 5720 - 5798
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  5720 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtattctagcaaatgtctataggagttgct 5798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 9892 - 9814
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  9892 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 9814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 3800223 - 3800294
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| |||| ||||||||||||    
T  3800223 ctttttagttataacttgctaaaacacaaccttctaaaaaataagtgggtgtatcctagaaaatgcttatag 3800294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 31039722 - 31039644
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  31039722 ctttttagttataacttgctaaaacacat-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 31039644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 50801601 - 50801679
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  50801601 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 50801679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 50874279 - 50874201
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  50874279 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 50874201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 1376163 - 1376085
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| ||| ||||| ||||||||||| |||||||||||||    
T  1376163 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtggatgtatcctagcaaatgcctataggagttgct 1376085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 27317666 - 27317744
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  27317666 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtggatgtattctagcaaatgcctataggagttgct 27317744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 32203180 - 32203258
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||| |||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  32203180 ctttctagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtattctagcaaatgcctataagagttgct 32203258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 53467516 - 53467438
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| || | ||||||||    
T  53467516 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgcctacatgagttgct 53467438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 17605506 - 17605578
Alignment:
Q  276 agttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||  || |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  17605506 agttataacttgctaaaaca-aaccttctaaaaaataagtgggtgtatcctagcaaatgcatataggagttgct 17605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 8814805 - 8814883
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| | ||||||||||||||| ||  |||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  8814805 ctttttaatcataacttgctaaaacacac-cttcaaaaaaataagtgggtgtattctagcaaatgcttatagaagttgct 8814883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 12127568 - 12127646
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||| ||||||||| ||  |||||||||||||| ||||||||| |||| |||||| |||||||||||||    
T  12127568 ctttttagttataacatgctaaaacacac-cttctaaaaaataagtgggtgtatcctagaaaatgcctataggagttgct 12127646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13349162 - 13349240
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| |   |||||||||||||| ||||||||| ||||||||||| ||| |||||||||    
T  13349162 ctttttagttataacttgctaaaacacgc-cttctaaaaaataagtgggtgtatcctagcaaatgcctattggagttgct 13349240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 53581586 - 53581664
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| |||||||||  |||||||||  |||||||||||||    
T  53581586 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcttagcaaatgtctataggagttgct 53581664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 27360025 - 27360100
Alignment:
Q  272 ttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||| ||  ||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  27360025 ttttagttataacttgctaaaacacac-cttataaaaaataagtggatgtattctagcaaatgc-tataggagttgct 27360100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 51877396 - 51877320
Alignment:
Q  81 gggaaatgctaaagag--cctttaggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaa 155  Q
    |||||||||||||||   |||| |||||||||||||||||||||||||| ||||||| |||| | ||||||||||||    
T  51877396 gggaaatgctaaagaataccttaaggcattggttaaaaggacaaatttagaaatattgtattcagaaatggtgaaaa 51877320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 33837971 - 33837897
Alignment:
Q  274 ttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||| ||  |||||||||||||| || |||||| ||||||||||  |||||||||||||    
T  33837971 ttagttataacttgctaaaacacac-cttctaaaaaataagtgagtgtatcctagcaaatgtctataggagttgct 33837897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 48765378 - 48765316
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaat 333  Q
    ||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||| ||||||||    
T  48765378 ctttttagttataacttactaaaacacac-cttctaaaaaataaatgggtgtattttagcaaat 48765316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 50913165 - 50913087
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||  ||||||| ||  |||||||||| ||| ||||||||||||||||||||| | |||||||||||    
T  50913165 ctttttagttataactccctaaaacacac-cttctaaaaattaagtgggtgtattctagcaaatgcctgtaggagttgct 50913087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 6748782 - 6748733
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  6748782 cttctaaaaaagaagtgggtgtattctagcaaatgcttataggatttgct 6748733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 7848589 - 7848638
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  7848589 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 7848638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 3269398 - 3269473
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    |||||||||||||| |||||||||  | | ||||||||||||| || |||||| ||||||||||| |||||||||||    
T  3269398 tttttagttataacatgctaaaacagaca-ttctaaaaaataagtgtgtgtatcctagcaaatgcatataggagttg 3269473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 6109296 - 6109248
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||    
T  6109296 ttctaaaaaataaatgggtgtattctagcaaatgcctatatgatttgct 6109248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 994854 - 994811
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  994854 cttctaaaaaataagtgggtgtattctagcaaatgcctatagga 994811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 22894679 - 22894633
Alignment:
Q  303 ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  22894679 ctaaaaaataagtgggtgtatcctagcaaatgtttataggagttgct 22894633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 6114843 - 6114892
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  6114843 cttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgct 6114892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 11460212 - 11460261
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| |||||| |||||||||||||| ||||||| |||||    
T  11460212 cttctaaaaaataagtgggtgcattctagcaaatgcctataggatttgct 11460261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 21727707 - 21727756
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| | ||||| |||||    
T  21727707 cttctaaaaaataagtgggtgtattctagcaaatgcctgtaggatttgct 21727756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 26158365 - 26158316
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  26158365 cttctaaaaaataagtaggtgtattctagcaaatgcctataggatttgct 26158316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 7521421 - 7521469
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  7521421 ttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgct 7521469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 51952269 - 51952313
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||    
T  51952269 aaaaaataagtgggtgtattctagcaaatgcctataggatttgct 51952313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 4043690 - 4043733
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| | ||||||||||||||||||| |||||||    
T  4043690 cttctaaaaaataagttggtgtattctagcaaatgcctatagga 4043733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 17226307 - 17226272
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgc 335  Q
    |||||||||||||| |||||||||||||||||||||    
T  17226307 cttctaaaaaataagtgggtgtattctagcaaatgc 17226272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 26103779 - 26103704
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||  | | |||||||||||||| ||||||  | || |||||||| |||||||||||||    
T  26103779 tttttagttataacttgctaaaagac-accttctaaaaaataagtgggtg--tcctggcaaatgcatataggagttgct 26103704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 50420710 - 50420655
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgccct 207  Q
    |||||||||||||||| |||||| || ||||||||  |||| ||||||||||||||    
T  50420710 aaaattgttgaattcaatgcaaaattttcatttttaatttctttaactagtgccct 50420655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 50673107 - 50673032
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataa 227  Q
    |||||||  ||||||| ||||| |||||||||||||||||  |||||||||||| | ||  |||| ||||||||||    
T  50673107 aaaattgcagaattcaatgcaatcttatcattttttgttttgttaactagtgccataagaacactggttagtataa 50673032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 50173456 - 50173514
Alignment:
Q  182 ttttttgtttccttaactagtgcccttagggcactagttagtataacccttaaaataaa 240  Q
    |||||||  ||||||||||||| ||| |||||||| ||||| ||||||| |||||||||    
T  50173456 ttttttgaatccttaactagtgtcctaagggcacttgttagcataacccataaaataaa 50173514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 37504603 - 37504652
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||| |||||    
T  37504603 cttctaaaaaataagtgggtgtattctaacaaatgtctataggatttgct 37504652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 38798040 - 38798089
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||| |||||| |||||||||| ||||||| |||||    
T  38798040 cttctaaaaaataagtggatgtattttagcaaatgcctataggatttgct 38798089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 47461756 - 47461805
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  47461756 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 47461805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 995155 - 995111
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  995155 aaaaaataagtggttgtattctagcaaatgcctataggatttgct 995111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 2868295 - 2868247
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||| ||||||||||| |||| || |||||    
T  2868295 ttctaaaaaataagtgggtgtatcctagcaaatgcctatatgatttgct 2868247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 3544356 - 3544400
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||||||||||||||||| |||| || |||||    
T  3544356 aaaaaataagtgggtgtattctagcaaatgcctataagatttgct 3544400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 4298444 - 4298392
Alignment:
Q  104 gcattggttaaaaggacaaatttaaaaatattttatt-taaaaatggtgaaaa 155  Q
    ||||||||||||| ||||||||||||||| || ||||  ||||||||||||||    
T  4298444 gcattggttaaaatgacaaatttaaaaatgttgtattggaaaaatggtgaaaa 4298392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 29213362 - 29213414
Alignment:
Q  103 ggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaa 155  Q
    |||||||||||| |||||||||||| |||  || |||| ||||||||||||||    
T  29213362 ggcattggttaataggacaaatttagaaacgttatattgaaaaatggtgaaaa 29213414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 29239758 - 29239679
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttct-aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||||| || | |||| ||||||||  |||||||||| || ||||||| |||| ||||||||    
T  29239758 ctttttagttataacttggtaaaacacaca-ttctaaaaaaatatgtgggtgtattttaacaaatgcctatacgagttgct 29239679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 36823982 - 36824057
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagtt 346  Q
    ||||||| ||||||||||||||||| | | ||||||||||| || |   ||||||||||||||||| ||| ||||||    
T  36823982 ctttttaattataacttgctaaaacac-accttctaaaaaacaagttcttgtattctagcaaatgcctattggagtt 36824057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 45059664 - 45059616
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||| |||||    
T  45059664 ttctaaaaaataagtgggtgtatcctagcaaatgtctataggatttgct 45059616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 463471 - 463393
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  463471 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 463393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 16005601 - 16005679
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  16005601 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 16005679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 26843156 - 26843078
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  26843156 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 26843078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 28454745 - 28454820
Alignment:
Q  273 tttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  28454745 tttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 28454820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 6192584 - 6192506
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||| |||| ||  ||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  6192584 ctttttagttataacttgctgaaacacac-cttctaaaatataagtgggtgtattctagcaaatgcatataggagttgct 6192506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 8643033 - 8643111
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||| |||||||||||||||||| ||  |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  8643033 ctttttggttataacttgctaaaacacat-cttctaaaaaataagtgggtgtattatagcaaatgcgtataggagttgct 8643111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13264568 - 13264646
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||| |||| ||||||||    
T  13264568 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgcctatatgagttgct 13264646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 34515289 - 34515211
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  34515289 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtgggtgtattctaacaaatgcctataggagttgct 34515211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 36389617 - 36389539
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  36389617 ctttttagttataacttgctaaaacacac-cttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 36389539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 5491760 - 5491682
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| || ||||||||||| |||||  |||||||||||||    
T  5491760 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgagtgtattctagtaaatgtctataggagttgct 5491682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 27787959 - 27787881
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||| | |||| ||||||||    
T  27787959 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaattcctataagagttgct 27787881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 32156020 - 32156098
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||| ||||||||||||||||| |  | ||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  32156020 ctttttatttataacttgctaaaacactca-ttctaaaaaataagtgggtgtattctagcaaatgcatacaggagttgct 32156098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 51431884 - 51431958
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagtt 346  Q
    ||||||||||||| |||||||||| ||  |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  51431884 tttttagttataatttgctaaaacacac-cttctaaaaaataagtgggtgtattctagcaaatgtctataggagtt 51431958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 34306602 - 34306520
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtg----tattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||| | ||| |||||||||||||| ||||||    ||||||||||||||| |||||||||||||    
T  34306602 ctttttagttataacttgctaaagcacaa-cttctaaaaaataagtgggtgagtgtattctagcaaatgcctataggagttgct 34306520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 13157718 - 13157646
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||  |||||||    
T  13157718 ctttttagttataacttgctaaaacacac-cttctaaaaaataagtgggtgtatcctagcaaatgtctatagga 13157646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 334
Target Start/End: Complemental strand, 32994329 - 32994266
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatg 334  Q
    ||||||| ||||||||||||||||| || | |||||||||||||||| |||||||||||||||||    
T  32994329 ctttttaattataacttgctaaaacacata-ttctaaaaaataaatgagtgtattctagcaaatg 32994266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 158573 - 158495
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||||| ||||||| |||||| ||| |||||||| | |||||||||||||    
T  158573 ctttttagttataacttgctaaaacacac-cttctagaaaataagtgggtgaattatagcaaattcctataggagttgct 158495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 3979536 - 3979458
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||| |||| | ||  |||||||||||||| |||||||||| |||||||||  |||||||||||||    
T  3979536 ctttttagttataacttgttaaagcacac-cttctaaaaaataagtgggtgtattatagcaaatgtctataggagttgct 3979458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 16073598 - 16073520
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| || | ||||||||||||| |||||||||  || ||||||| | |||||||||||    
T  16073598 ctttttagttataacttgctaaaacacaca-ttctaaaaaataagtgggtgtatcataacaaatgcctgtaggagttgct 16073520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 24770788 - 24770710
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||| ||| ||||| ||||||||| ||||||||||| |||||| ||||||    
T  24770788 ctttttagttataacttgctaaaacacac-cttcaaaagaataagtgggtgtatcctagcaaatgcctataggggttgct 24770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 50559408 - 50559330
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||| ||  |||| ||||||||| |||| |||| ||| ||||||| |||||||||||||    
T  50559408 ctttttagttataacttgctaaaacacac-cttcaaaaaaataagtgggcgtatcctaacaaatgcctataggagttgct 50559330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 3273370 - 3273447
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||| ||||||| ||  ||| |||||||||| |||||| |||||| ||||||| |||||||||||||    
T  3273370 tttttagttataacttactaaaacacac-cttttaaaaaataagtgggtgcattctaacaaatgcctataggagttgct 3273447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 4158265 - 4158188
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||| ||  ||| |||||||||| ||||||| | ||| |||||||||||||||||||||    
T  4158265 tttttagttataacctgctaaaacacac-cttttaaaaaataagtgggtgtttcctaacaaatgcttataggagttgct 4158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 14387529 - 14387480
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  14387529 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 14387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 32151995 - 32151946
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  32151995 cttctaaaaaataagtgggtgtatcctagcaaatgcatataggagttgct 32151946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 27389543 - 27389586
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatagga 343  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  27389543 cttctaaaaaataagtgggtgtattctagcaaatgcctatagga 27389586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 42199890 - 42199968
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||  ||  |||||||||| ||| || |||||||||||||||||| | || ||||||||    
T  42199890 ctttttagttataacttgctaaaatacac-cttctaaaaattaagtgtgtgtattctagcaaatgcctgtaagagttgct 42199968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 42208758 - 42208836
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||  ||  |||||||||| ||| || |||||||||||||||||| | || ||||||||    
T  42208758 ctttttagttataacttgctaaaatacac-cttctaaaaattaagtgtgtgtattctagcaaatgcctgtaagagttgct 42208836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 45818818 - 45818896
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| || ||||| | ||| |||||||||||||| |||||||||| |||||||||  |||| ||||||||    
T  45818818 ctttttagttataattttctaaagcacaa-cttctaaaaaataagtgggtgtattatagcaaatgtctatatgagttgct 45818896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 1805044 - 1805093
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||| |||||    
T  1805044 cttctaaaagataagtgggtgtattctagcaaatgcctataggatttgct 1805093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 12381224 - 12381150
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataac 228  Q
    |||||||||||||||| |  ||||||| |||||||||||| ||||||||||| ||| |||||||  ||||| |||||    
T  12381224 aaaattgttgaattcaat--aaacttaccattttttgtttacttaactagtgtcctaagggcaccggttagcataac 12381150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 12385291 - 12385217
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataac 228  Q
    |||||||||||||||| |  ||||||| |||||||||||| ||||||||||| ||| |||||||  ||||| |||||    
T  12385291 aaaattgttgaattcaat--aaacttaccattttttgtttacttaactagtgtcctaagggcaccggttagcataac 12385217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 20411326 - 20411277
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  20411326 cttctaaaaaataagtgggtgtattctagcaaatgactataggatttgct 20411277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 39424397 - 39424348
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  39424397 cttctaaaaaataagttggtgtattctagcaaatgcctataggatttgct 39424348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 41146287 - 41146363
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttg 347  Q
    ||||||||||||||||||||||||| | | |||| ||||||||| ||||| ||| ||||||||||  ||| |||||||    
T  41146287 ctttttagttataacttgctaaaacac-accttcaaaaaaataagtgggtatatcctagcaaatgtctattggagttg 41146363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 43236291 - 43236242
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||| |||||    
T  43236291 cttctaaaaaataagtgggtgtatcctagcaaatgcctataggatttgct 43236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 47130867 - 47130803
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgc 335  Q
    ||||||||||||||| ||||||||| || | || |||||||||| ||||||||| |||||||||||    
T  47130867 ctttttagttataacctgctaaaacgcacattt-taaaaaataagtgggtgtatcctagcaaatgc 47130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 13157411 - 13157363
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| |||||| ||| |||||||||| |||||||||||||    
T  13157411 ttctaaaaaataagtgggtgaattatagcaaatgcctataggagttgct 13157363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 27935102 - 27935158
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgccctt 208  Q
    |||||||||||||||| | ||||||||  |||||||||||||||||| |||| ||||    
T  27935102 aaaattgttgaattcaatacaaacttactattttttgtttccttaacgagtgtcctt 27935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 34429800 - 34429744
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgccctt 208  Q
    ||||||||||||||||   ||||||||  |||||||||||||||||| |||||||||    
T  34429800 aaaattgttgaattcaaaacaaacttactattttttgtttccttaacaagtgccctt 34429744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 47130976 - 47131020
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||    
T  47130976 aaaaaataagtgggtgtattctagcaaatgcctataggatttgct 47131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 40289118 - 40289067
Alignment:
Q  154 aattgttgaattcattgcaaacttatcattttttgtttccttaactagtgcc 205  Q
    |||| ||||||||| |||||||||| |||||||| ||| |||||||||||||    
T  40289118 aattattgaattcaatgcaaacttaccattttttattttcttaactagtgcc 40289067  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 14387411 - 14387335
Alignment:
Q  271 tttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||| |||||| ||  |||||||||| ||||||| |||||||||| |||||  |||||||| ||||    
T  14387411 tttttagttataacttgttaaaacacac-cttctaaaaa-taaatggatgtattctagtaaatggctataggagctgct 14387335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 32144177 - 32144131
Alignment:
Q  303 ctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||| ||||||||| ||||||||||  |||||||||||||    
T  32144177 ctaaaaaataagtgggtgtatcctagcaaatgtctataggagttgct 32144131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 12864352 - 12864397
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||||||||||||||||||||| |||| || |||||    
T  12864352 taaaaaataagtgggtgtattctagcaaatgcctatatgatttgct 12864397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 13385790 - 13385839
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  13385790 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 13385839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 14494498 - 14494449
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||| |||||    
T  14494498 cttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgct 14494449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 16960411 - 16960362
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| || |||||||||||||||||| |||| || |||||    
T  16960411 cttctaaaaaataagtgagtgtattctagcaaatgcctatatgatttgct 16960362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 27255777 - 27255732
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||    
T  27255777 taaaaaataagagggtgtattctagcaaatgcctataggatttgct 27255732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 32144121 - 32144072
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||| | ||||||||| |||| ||||||||    
T  32144121 cttctaaaaaataagtgggtgtatcccagcaaatgcatataagagttgct 32144072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 32716462 - 32716511
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||| |||||||| ||||||||||||||||||||| |||| || |||||    
T  32716462 cttcttaaaaataagtgggtgtattctagcaaatgcctataagatttgct 32716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 44359755 - 44359840
Alignment:
Q  155 attgttgaattcattgcaaacttatcattttttgtttccttaactagtgcccttagggcactagttagtataacccttaaaataaa 240  Q
    ||||||||||||| || |||  ||  |||||| ||||||||||| | |||||| |||||||||||||| |  |||| |||||||||    
T  44359755 attgttgaattcaatgtaaatatactatttttggtttccttaaccattgccctgagggcactagttagcaagacccataaaataaa 44359840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 50797788 - 50797743
Alignment:
Q  304 taaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||| ||||| ||||||| ||| |||||||||||||||||    
T  50797788 taaaaaataagtgggtatattctaacaagtgcttataggagttgct 50797743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 52772375 - 52772326
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||| |||||||| ||||||||||||||||||||| |||| || |||||    
T  52772375 cttctgaaaaataagtgggtgtattctagcaaatgcctataagatttgct 52772326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 13943391 - 13943351
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttata 340  Q
    |||||||||||||| ||||||||||||| ||||||| ||||    
T  13943391 cttctaaaaaataagtgggtgtattctaacaaatgcctata 13943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 23413706 - 23413750
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||| |||||||||||||||| | ||||||||||||    
T  23413706 aaaaaataagtggatgtattctagcaaatgttcataggagttgct 23413750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 27935021 - 27935073
Alignment:
Q  103 ggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaa 155  Q
    |||||||||||||| |||||| |||||||| || ||||  |||||||||||||    
T  27935021 ggcattggttaaaaagacaaacttaaaaattttgtattggaaaatggtgaaaa 27935073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 32152049 - 32152005
Alignment:
Q  305 aaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||| ||||||||| ||||||||||  |||||||||||||    
T  32152049 aaaaaataagtgggtgtatcctagcaaatgtctataggagttgct 32152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 32268116 - 32268052
Alignment:
Q  103 ggcattggttaaaaggacaaatttaaaaatattttatttaaaaatggtgaaaattgttgaattca 167  Q
    ||||||| ||||||| ||| |  |||||||| ||| || |||||||||||||| |||||||||||    
T  32268116 ggcattgattaaaagaacataaataaaaataatttgttgaaaaatggtgaaaagtgttgaattca 32268052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 36596606 - 36596554
Alignment:
Q  152 aaaattgttgaattcattgcaaacttatcattttttgtttccttaactagtgc 204  Q
    |||||||||||||||| ||||||||||  ||||||  |||| |||||||||||    
T  36596606 aaaattgttgaattcaatgcaaacttactatttttaatttctttaactagtgc 36596554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 36817778 - 36817730
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| || |||||||||||||||| | ||||||| |||||    
T  36817778 ttctaaaaaataagtgtgtgtattctagcaaattcctataggatttgct 36817730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 4097 - 4174
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||| |||| ||  |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  4097 ctttttagttataacttgctcaaacacac-cttctaaaaaataagtgggtgtatt-tagcaaatgcttataggagttgct 4174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 20779 - 20701
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||||||||||||||  |  |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  20779 ctttttagttataacttgctaaaacatac-cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgct 20701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 6576 - 6654
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||||||||||||||  ||  |||||||||||||||| | ||||| ||||||||||| |||||||||||||    
T  6576 ctttttagttataacttgctaaaatacac-cttctaaaaaataaatagatgtatcctagcaaatgcctataggagttgct 6654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 57961 - 58010
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  57961 cttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgct 58010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 601 - 679
Alignment:
Q  270 ctttttagttataacttgctaaaacccaaacttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    ||||||||||||| |||||||||||  |  ||||| |||||||| ||||||||| |||| |||||| |||||||||||||    
T  601 ctttttagttatagcttgctaaaacatac-cttctgaaaaataagtgggtgtatcctagaaaatgcctataggagttgct 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 2796 - 2837
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  2796 cttctaaaaaataagtgggtgtattctaacaaatgcctatag 2837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 14851 - 14892
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttatag 341  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  14851 cttctaaaaaataagtgggtgtattctaacaaatgcctatag 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 452497 - 452448
Alignment:
Q  300 cttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||||||||| ||||||||||||| ||||||| |||| || |||||    
T  452497 cttctaaaaaataagtgggtgtattctaacaaatgcctatacgatttgct 452448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 26182 - 26134
Alignment:
Q  301 ttctaaaaaataaatgggtgtattctagcaaatgcttataggagttgct 349  Q
    |||||||| |||| ||||||||||||||||||||| |||| || |||||    
T  26182 ttctaaaatataagtgggtgtattctagcaaatgcctataagatttgct 26134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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