View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2226_low_8 (Length: 253)
Name: NF2226_low_8
Description: NF2226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2226_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 5169089 - 5169301
Alignment:
| Q |
10 |
aagaatataagagggttaaaattctgaattttaaaataggaactgttttatttgaaaaattctaaaagttttctccgttatctacataatccctttccga |
109 |
Q |
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| T |
5169089 |
aagaaaataagagggttaaaattctgaattttaaaataggaactgttgtatttgaaaaattctaaaagttt--------atctacataatccctttccga |
5169180 |
T |
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| Q |
110 |
tgacatcgatccattcatatttcccttaaatattctcactcttccagatgttaccgcacttcatatgctatcactaatctctaatctccgacttccatat |
209 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
5169181 |
tggcatcgatccattcatatttcccttaaatattctcgctcttccagatgttaccgcacttcatatgctatcactaatctctaatctctgacttccatat |
5169280 |
T |
|
| Q |
210 |
tacaagtatagacataacttt |
230 |
Q |
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||||||||||||||||||||| |
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| T |
5169281 |
tacaagtatagacataacttt |
5169301 |
T |
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