View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2332-Insertion-3 (Length: 245)
Name: NF2332-Insertion-3
Description: NF2332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2332-Insertion-3 |
 | |
|
| [»] chr4 (1 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 36714693 - 36714931
Alignment:
| Q |
7 |
atcaatgtctttttctgaaatcatggtgacgtggtgattttgttttgtttaaactttagaatgtacgttgttttgttagattttacaaactcataatggt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36714693 |
atcaatgtctttttctgaaatcatggtgacgtggtgattttgttttgttcaaactttagaatgtacgttgttttgttagattttacaaactcataatggt |
36714792 |
T |
|
| Q |
107 |
tcatcttgattctgtcaaatcggacacgtgactatgtcaaatcaaacaaatttgttttaaaataattaactaaagacttaatataatgatgaaactttca |
206 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
36714793 |
tcatcgtgattctgtcaaatcggacacgtgactatgtcaaatcaaacaaatttgttttaaaataattaactaaagacttaatataatgatgaaactttta |
36714892 |
T |
|
| Q |
207 |
aaagaattaaataaagattttcattactgttcttttgag |
245 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36714893 |
aaagaattaaataaagactttcattactgttcttttgag |
36714931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 8446 times since January 2019
Visitors: 7802