View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2332_high_23 (Length: 272)
Name: NF2332_high_23
Description: NF2332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2332_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 7380594 - 7380338
Alignment:
| Q |
1 |
ttaaggatgttgtaatgttaaaataatgttttggtcnnnnnnnggaaagaataatgttttgtggttttggaagagggaaatatataggagggaaaatagg |
100 |
Q |
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| T |
7380594 |
ttaagtatgttataatgttaaaataatgttttggtctttttttggaa-gaataatgttttgtggttttggaagagggaaatatataggagggaaaatagg |
7380496 |
T |
|
| Q |
101 |
agatgcttggttttgatgaaggagtagaatggatagaaaaagagatgtggatttaatatttaaaggggagattaattaaggtggtttggattaatttgag |
200 |
Q |
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| T |
7380495 |
agatggttggttttgatgaaggagtagaatggatagaaaaagagatgtggatttaatatttaaaggggagattaattaaggtggtttggattaatttgag |
7380396 |
T |
|
| Q |
201 |
atggaggtatagtctagaggtttctattaattaaagtccaacattaacatgtgactat |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7380395 |
atggaggtatagtctagaggtttctattaattaaagtccaacattaacatgtgactat |
7380338 |
T |
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