View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2332_high_27 (Length: 230)

Name: NF2332_high_27
Description: NF2332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2332_high_27
NF2332_high_27
[»] chr1 (93 HSPs)
chr1 (88-216)||(50631592-50631720)
chr1 (89-220)||(49982456-49982587)
chr1 (89-216)||(23539942-23540069)
chr1 (89-211)||(47458813-47458934)
chr1 (89-220)||(17203024-17203153)
chr1 (89-220)||(41568720-41568850)
chr1 (115-216)||(30546791-30546892)
chr1 (88-220)||(39084709-39084840)
chr1 (89-216)||(32912211-32912337)
chr1 (89-220)||(46283049-46283179)
chr1 (142-216)||(38862441-38862515)
chr1 (89-211)||(40868134-40868255)
chr1 (94-211)||(35533878-35533994)
chr1 (95-220)||(51873280-51873404)
chr1 (89-220)||(8096599-8096730)
chr1 (93-216)||(26423845-26423968)
chr1 (141-216)||(33986153-33986227)
chr1 (89-220)||(34410950-34411080)
chr1 (113-206)||(41541501-41541595)
chr1 (125-211)||(46918668-46918753)
chr1 (89-210)||(24677553-24677673)
chr1 (88-205)||(43916345-43916462)
chr1 (88-216)||(44979152-44979281)
chr1 (149-216)||(20280500-20280568)
chr1 (89-205)||(40054878-40054994)
chr1 (89-220)||(13216093-13216223)
chr1 (125-220)||(47209319-47209414)
chr1 (89-211)||(50533904-50534025)
chr1 (88-205)||(1845072-1845189)
chr1 (98-211)||(48313316-48313429)
chr1 (144-216)||(48868117-48868190)
chr1 (149-216)||(28094838-28094906)
chr1 (91-210)||(30547895-30548014)
chr1 (149-216)||(33234114-33234182)
chr1 (149-216)||(33771706-33771774)
chr1 (89-217)||(39871385-39871512)
chr1 (149-216)||(41550207-41550275)
chr1 (93-216)||(43146702-43146823)
chr1 (89-205)||(45650298-45650414)
chr1 (89-205)||(9587933-9588050)
chr1 (89-205)||(25702435-25702552)
chr1 (91-203)||(34038163-34038276)
chr1 (89-220)||(35912633-35912762)
chr1 (89-191)||(36735512-36735615)
chr1 (89-205)||(38261093-38261209)
chr1 (108-190)||(46707362-46707445)
chr1 (113-210)||(12178884-12178982)
chr1 (142-220)||(14077605-14077683)
chr1 (89-210)||(24511864-24511985)
chr1 (89-139)||(38207529-38207579)
chr1 (89-190)||(51610536-51610637)
chr1 (144-216)||(9222909-9222982)
chr1 (144-216)||(9259871-9259944)
chr1 (144-216)||(17376634-17376707)
chr1 (144-216)||(37765308-37765381)
chr1 (144-216)||(40850300-40850373)
chr1 (144-216)||(41321284-41321357)
chr1 (144-216)||(48481128-48481201)
chr1 (89-205)||(5957256-5957371)
chr1 (89-205)||(7435805-7435920)
chr1 (89-205)||(12838060-12838176)
chr1 (144-211)||(27802096-27802164)
chr1 (89-216)||(51004790-51004918)
chr1 (91-220)||(52180507-52180637)
chr1 (169-216)||(3150266-3150313)
chr1 (88-211)||(5360201-5360323)
chr1 (169-216)||(7426741-7426788)
chr1 (89-205)||(12105160-12105277)
chr1 (89-136)||(29877702-29877749)
chr1 (169-216)||(33828945-33828992)
chr1 (169-216)||(33838974-33839021)
chr1 (112-210)||(34100735-34100834)
chr1 (169-216)||(39853238-39853285)
chr1 (112-210)||(42958863-42958962)
chr1 (169-216)||(43224726-43224773)
chr1 (89-205)||(44263946-44264063)
chr1 (169-211)||(1658630-1658672)
chr1 (109-190)||(17525742-17525824)
chr1 (89-220)||(24230569-24230701)
chr1 (89-210)||(33909975-33910096)
chr1 (89-220)||(35873936-35874068)
chr1 (89-139)||(44808761-44808811)
chr1 (144-216)||(10635300-10635373)
chr1 (144-216)||(22821527-22821600)
chr1 (144-216)||(24247857-24247930)
chr1 (144-216)||(29171444-29171517)
chr1 (169-210)||(31571052-31571093)
chr1 (144-216)||(44647300-44647373)
chr1 (108-205)||(47693491-47693587)
chr1 (88-136)||(4156140-4156188)
chr1 (91-190)||(44382019-44382118)
chr1 (169-209)||(47860836-47860876)
chr1 (149-216)||(49739409-49739477)
[»] chr2 (63 HSPs)
chr2 (89-216)||(2859359-2859485)
chr2 (89-210)||(45690499-45690620)
chr2 (89-211)||(25740271-25740393)
chr2 (89-211)||(11088507-11088632)
chr2 (89-216)||(38073106-38073232)
chr2 (88-216)||(37781865-37781993)
chr2 (88-216)||(42640849-42640976)
chr2 (89-220)||(12182834-12182965)
chr2 (89-216)||(40287706-40287833)
chr2 (88-205)||(15362468-15362585)
chr2 (89-211)||(5615668-5615790)
chr2 (89-211)||(28318041-28318162)
chr2 (89-205)||(41555431-41555547)
chr2 (142-221)||(2283218-2283297)
chr2 (89-220)||(4108582-4108712)
chr2 (93-216)||(12071434-12071556)
chr2 (89-220)||(43359379-43359509)
chr2 (90-216)||(12002625-12002750)
chr2 (89-191)||(8333891-8333994)
chr2 (93-216)||(8362405-8362528)
chr2 (89-220)||(33429409-33429539)
chr2 (144-216)||(26738311-26738384)
chr2 (88-205)||(34188825-34188942)
chr2 (117-220)||(8504056-8504158)
chr2 (89-211)||(11986185-11986309)
chr2 (112-210)||(14947449-14947548)
chr2 (93-216)||(25712722-25712845)
chr2 (89-205)||(35895311-35895428)
chr2 (142-220)||(7069470-7069548)
chr2 (101-211)||(7366787-7366896)
chr2 (93-147)||(17456141-17456195)
chr2 (106-220)||(36428523-36428636)
chr2 (89-210)||(38617728-38617848)
chr2 (144-216)||(1860206-1860279)
chr2 (144-216)||(6657724-6657797)
chr2 (144-216)||(7504077-7504150)
chr2 (143-216)||(15205796-15205869)
chr2 (144-216)||(39878974-39879047)
chr2 (149-216)||(21425488-21425556)
chr2 (169-216)||(2316919-2316966)
chr2 (169-216)||(13568293-13568340)
chr2 (90-205)||(15334090-15334205)
chr2 (112-190)||(16114486-16114565)
chr2 (169-216)||(18576381-18576428)
chr2 (101-216)||(22622430-22622545)
chr2 (169-216)||(28394347-28394394)
chr2 (169-216)||(35292790-35292837)
chr2 (144-210)||(36049519-36049586)
chr2 (169-216)||(36192051-36192098)
chr2 (169-216)||(37725830-37725877)
chr2 (92-211)||(37989314-37989431)
chr2 (169-216)||(40533530-40533577)
chr2 (89-210)||(6438172-6438293)
chr2 (89-210)||(6513262-6513383)
chr2 (113-211)||(41184772-41184869)
chr2 (92-205)||(713362-713475)
chr2 (169-210)||(5084920-5084961)
chr2 (169-210)||(16814932-16814973)
chr2 (169-210)||(16854212-16854253)
chr2 (165-210)||(19268642-19268687)
chr2 (144-216)||(41839933-41840006)
chr2 (144-211)||(14820177-14820245)
chr2 (115-175)||(17809063-17809123)
[»] chr8 (57 HSPs)
chr8 (94-216)||(12801385-12801507)
chr8 (91-220)||(30777274-30777402)
chr8 (90-216)||(28885961-28886087)
chr8 (89-211)||(12632904-12633027)
chr8 (88-220)||(40547689-40547821)
chr8 (88-220)||(44636920-44637051)
chr8 (89-216)||(31893333-31893460)
chr8 (89-210)||(5982184-5982304)
chr8 (90-187)||(6804009-6804106)
chr8 (89-211)||(34057829-34057950)
chr8 (91-221)||(34520846-34520975)
chr8 (89-220)||(37218877-37219012)
chr8 (95-220)||(43332021-43332144)
chr8 (95-220)||(44309843-44309966)
chr8 (149-216)||(38803713-38803781)
chr8 (88-220)||(42194658-42194790)
chr8 (89-220)||(5273326-5273456)
chr8 (89-220)||(9008037-9008168)
chr8 (165-216)||(18844236-18844287)
chr8 (165-216)||(27100888-27100939)
chr8 (101-220)||(36569673-36569791)
chr8 (94-220)||(2879936-2880061)
chr8 (95-209)||(12107490-12107604)
chr8 (89-210)||(17642358-17642479)
chr8 (106-216)||(42164924-42165034)
chr8 (92-216)||(463838-463962)
chr8 (88-205)||(2261303-2261421)
chr8 (149-216)||(3053078-3053146)
chr8 (89-205)||(38764738-38764854)
chr8 (165-216)||(29039690-29039741)
chr8 (89-205)||(29454143-29454260)
chr8 (89-191)||(32887666-32887769)
chr8 (92-211)||(39722239-39722358)
chr8 (89-211)||(41674769-41674891)
chr8 (89-190)||(17792509-17792610)
chr8 (144-216)||(1426382-1426455)
chr8 (144-216)||(12266126-12266199)
chr8 (144-216)||(36835621-36835694)
chr8 (89-217)||(5215322-5215450)
chr8 (107-210)||(36274581-36274685)
chr8 (92-210)||(2273294-2273412)
chr8 (169-216)||(7223762-7223809)
chr8 (89-220)||(11360169-11360299)
chr8 (169-216)||(14913925-14913972)
chr8 (169-216)||(21835709-21835756)
chr8 (89-136)||(23870268-23870315)
chr8 (112-210)||(24377587-24377686)
chr8 (169-216)||(28896984-28897031)
chr8 (113-220)||(40154707-40154813)
chr8 (169-216)||(45393527-45393574)
chr8 (169-216)||(45401427-45401474)
chr8 (89-178)||(36672010-36672099)
chr8 (169-211)||(38971748-38971790)
chr8 (169-211)||(39002846-39002888)
chr8 (111-190)||(27172219-27172299)
chr8 (89-188)||(31158861-31158960)
chr8 (108-205)||(40776655-40776754)
[»] chr7 (58 HSPs)
chr7 (94-216)||(27800033-27800155)
chr7 (92-216)||(43542060-43542183)
chr7 (90-216)||(31311623-31311749)
chr7 (95-216)||(40856544-40856665)
chr7 (89-220)||(38882818-38882949)
chr7 (89-220)||(42584037-42584168)
chr7 (89-221)||(2932576-2932707)
chr7 (96-220)||(45442328-45442451)
chr7 (90-220)||(2089138-2089268)
chr7 (89-220)||(45701031-45701161)
chr7 (89-220)||(22639367-22639496)
chr7 (89-220)||(24204614-24204746)
chr7 (89-220)||(11640570-11640700)
chr7 (113-220)||(22904516-22904622)
chr7 (89-216)||(31743581-31743708)
chr7 (95-216)||(13806640-13806761)
chr7 (99-220)||(24149043-24149163)
chr7 (89-205)||(5215315-5215431)
chr7 (89-205)||(21919688-21919804)
chr7 (93-216)||(1343300-1343423)
chr7 (113-220)||(3228520-3228626)
chr7 (89-220)||(19345888-19346018)
chr7 (89-220)||(27897224-27897354)
chr7 (92-210)||(8577927-8578044)
chr7 (89-139)||(29688924-29688974)
chr7 (89-220)||(34363614-34363747)
chr7 (88-210)||(49079540-49079661)
chr7 (89-210)||(30936094-30936215)
chr7 (150-220)||(35925029-35925099)
chr7 (92-205)||(41769289-41769401)
chr7 (89-205)||(23182390-23182506)
chr7 (89-205)||(48460251-48460367)
chr7 (101-220)||(27427140-27427258)
chr7 (90-201)||(32823402-32823512)
chr7 (89-210)||(43631055-43631176)
chr7 (113-210)||(45857498-45857596)
chr7 (144-216)||(25867184-25867257)
chr7 (144-216)||(39444244-39444317)
chr7 (144-216)||(40947028-40947101)
chr7 (115-210)||(16086971-16087067)
chr7 (144-211)||(32186478-32186546)
chr7 (144-211)||(41715194-41715262)
chr7 (169-216)||(1282464-1282511)
chr7 (149-220)||(8648092-8648163)
chr7 (169-216)||(9923349-9923396)
chr7 (169-216)||(24505402-24505449)
chr7 (169-216)||(42039581-42039628)
chr7 (169-216)||(45196885-45196932)
chr7 (149-216)||(46911603-46911669)
chr7 (169-216)||(47220234-47220281)
chr7 (109-190)||(15591690-15591772)
chr7 (144-216)||(2038150-2038223)
chr7 (90-147)||(8159639-8159696)
chr7 (144-216)||(15090947-15091020)
chr7 (93-178)||(38859552-38859637)
chr7 (149-216)||(7574174-7574242)
chr7 (90-211)||(23406653-23406775)
chr7 (162-210)||(40379044-40379092)
[»] chr4 (76 HSPs)
chr4 (89-216)||(32570648-32570774)
chr4 (89-207)||(27950258-27950376)
chr4 (92-220)||(30168101-30168229)
chr4 (88-220)||(52323965-52324097)
chr4 (89-210)||(39412169-39412290)
chr4 (89-220)||(6806986-6807117)
chr4 (89-220)||(24566367-24566498)
chr4 (93-216)||(25607694-25607816)
chr4 (117-209)||(337130-337222)
chr4 (88-216)||(9579663-9579791)
chr4 (88-216)||(9585358-9585486)
chr4 (89-220)||(48207354-48207484)
chr4 (89-220)||(54178696-54178826)
chr4 (94-220)||(25684098-25684223)
chr4 (89-205)||(595296-595412)
chr4 (90-205)||(12756293-12756408)
chr4 (89-216)||(15060834-15060961)
chr4 (89-220)||(21424417-21424548)
chr4 (89-216)||(34584182-34584309)
chr4 (89-187)||(4695616-4695714)
chr4 (94-220)||(17281779-17281904)
chr4 (94-220)||(17370281-17370406)
chr4 (144-221)||(42680653-42680731)
chr4 (142-220)||(45063290-45063368)
chr4 (95-220)||(5474011-5474135)
chr4 (89-137)||(4491214-4491262)
chr4 (89-205)||(19527014-19527130)
chr4 (89-205)||(31975840-31975956)
chr4 (89-200)||(22077661-22077772)
chr4 (89-210)||(30060530-30060651)
chr4 (91-205)||(39103539-39103653)
chr4 (89-190)||(46663631-46663732)
chr4 (90-210)||(9858534-9858654)
chr4 (106-211)||(19627872-19627977)
chr4 (90-210)||(36091343-36091463)
chr4 (144-216)||(52257411-52257484)
chr4 (89-216)||(1605590-1605718)
chr4 (97-205)||(53973464-53973572)
chr4 (92-210)||(408348-408466)
chr4 (89-187)||(11038046-11038144)
chr4 (111-178)||(28967850-28967917)
chr4 (116-210)||(1791854-1791947)
chr4 (142-216)||(48262842-48262915)
chr4 (89-217)||(3690790-3690919)
chr4 (142-211)||(6882583-6882652)
chr4 (144-216)||(27636019-27636092)
chr4 (142-211)||(32882544-32882613)
chr4 (94-210)||(33491606-33491722)
chr4 (93-210)||(38960969-38961086)
chr4 (144-216)||(46630700-46630773)
chr4 (91-190)||(1433809-1433908)
chr4 (91-210)||(31908727-31908846)
chr4 (111-211)||(39380426-39380526)
chr4 (113-205)||(43349090-43349182)
chr4 (144-211)||(48549719-48549787)
chr4 (91-159)||(56303175-56303242)
chr4 (89-191)||(22789582-22789685)
chr4 (169-216)||(24292257-24292304)
chr4 (169-216)||(36569927-36569974)
chr4 (169-216)||(44998689-44998736)
chr4 (130-181)||(46688458-46688509)
chr4 (89-136)||(49286688-49286735)
chr4 (144-210)||(55129824-55129891)
chr4 (90-205)||(5970700-5970816)
chr4 (164-210)||(16004609-16004655)
chr4 (169-211)||(21515273-21515315)
chr4 (169-211)||(45629393-45629435)
chr4 (89-210)||(50189298-50189419)
chr4 (169-210)||(10779072-10779113)
chr4 (144-216)||(33612802-33612875)
chr4 (169-210)||(38955123-38955164)
chr4 (144-216)||(42244592-42244665)
chr4 (89-126)||(43349052-43349089)
chr4 (169-210)||(46222073-46222114)
chr4 (165-210)||(56017080-56017125)
chr4 (88-205)||(27990535-27990653)
[»] chr3 (73 HSPs)
chr3 (89-216)||(14998147-14998274)
chr3 (91-220)||(15804537-15804667)
chr3 (89-210)||(29384968-29385089)
chr3 (93-216)||(11510721-11510843)
chr3 (89-220)||(29815404-29815535)
chr3 (89-211)||(20199633-20199754)
chr3 (89-206)||(35375511-35375629)
chr3 (92-220)||(51996422-51996550)
chr3 (89-216)||(48795439-48795566)
chr3 (89-216)||(1129129-1129257)
chr3 (89-211)||(24397669-24397790)
chr3 (92-210)||(47175755-47175872)
chr3 (89-205)||(29698322-29698438)
chr3 (89-220)||(4521269-4521399)
chr3 (89-211)||(25480298-25480421)
chr3 (89-216)||(42622890-42623016)
chr3 (89-190)||(8966236-8966337)
chr3 (92-181)||(13867063-13867152)
chr3 (89-210)||(36789887-36790007)
chr3 (130-211)||(46936950-46937031)
chr3 (108-205)||(26456971-26457070)
chr3 (89-205)||(32121899-32122015)
chr3 (89-220)||(31185430-31185560)
chr3 (89-220)||(39540948-39541077)
chr3 (89-190)||(9252158-9252259)
chr3 (89-210)||(29806294-29806415)
chr3 (148-216)||(7347369-7347438)
chr3 (144-216)||(35320415-35320488)
chr3 (121-216)||(48990573-48990670)
chr3 (93-210)||(52776453-52776570)
chr3 (91-210)||(8433711-8433830)
chr3 (89-205)||(43903363-43903479)
chr3 (112-210)||(19914319-19914418)
chr3 (89-205)||(40478048-40478164)
chr3 (89-205)||(44379414-44379531)
chr3 (106-216)||(3732280-3732389)
chr3 (144-216)||(882003-882076)
chr3 (116-212)||(31479829-31479926)
chr3 (144-216)||(32720265-32720338)
chr3 (144-216)||(50465751-50465824)
chr3 (89-210)||(19547773-19547895)
chr3 (92-211)||(5335366-5335485)
chr3 (117-205)||(7862734-7862824)
chr3 (169-216)||(9322511-9322558)
chr3 (93-216)||(15298216-15298338)
chr3 (169-216)||(33830809-33830856)
chr3 (169-216)||(35352271-35352318)
chr3 (169-216)||(36019497-36019544)
chr3 (89-205)||(37520702-37520819)
chr3 (117-205)||(39678396-39678486)
chr3 (169-216)||(44500216-44500263)
chr3 (169-216)||(44962883-44962930)
chr3 (89-191)||(45635681-45635783)
chr3 (169-216)||(48925492-48925539)
chr3 (169-216)||(49951005-49951052)
chr3 (169-216)||(51235800-51235847)
chr3 (88-210)||(52024437-52024559)
chr3 (89-191)||(52058514-52058617)
chr3 (169-216)||(52782240-52782287)
chr3 (169-216)||(53376870-53376917)
chr3 (149-211)||(31226880-31226942)
chr3 (90-136)||(41982391-41982437)
chr3 (149-210)||(54009191-54009253)
chr3 (89-205)||(4817076-4817192)
chr3 (169-210)||(7157119-7157160)
chr3 (144-204)||(26409685-26409746)
chr3 (113-209)||(45602047-45602144)
chr3 (91-205)||(47746118-47746233)
chr3 (142-211)||(50206408-50206477)
chr3 (92-205)||(23456747-23456861)
chr3 (136-184)||(39289704-39289752)
chr3 (91-210)||(52082045-52082164)
chr3 (164-216)||(55418058-55418110)
[»] chr5 (54 HSPs)
chr5 (89-210)||(31588520-31588641)
chr5 (89-211)||(9499687-9499808)
chr5 (89-216)||(29996774-29996902)
chr5 (88-211)||(777147-777270)
chr5 (89-220)||(2011055-2011185)
chr5 (89-220)||(13593281-13593411)
chr5 (89-220)||(16602360-16602490)
chr5 (89-220)||(19239070-19239200)
chr5 (93-216)||(23408532-23408655)
chr5 (89-216)||(28205053-28205179)
chr5 (89-210)||(13091198-13091319)
chr5 (89-209)||(4367074-4367195)
chr5 (92-205)||(5140672-5140785)
chr5 (95-220)||(10118249-10118373)
chr5 (89-210)||(35162596-35162717)
chr5 (89-205)||(5204617-5204733)
chr5 (95-211)||(12336500-12336615)
chr5 (88-220)||(36410183-36410314)
chr5 (89-205)||(39939033-39939149)
chr5 (88-190)||(17069290-17069392)
chr5 (112-210)||(36156126-36156225)
chr5 (89-211)||(4039469-4039591)
chr5 (89-211)||(6335676-6335797)
chr5 (89-158)||(39979681-39979750)
chr5 (89-205)||(23690501-23690617)
chr5 (89-205)||(40756541-40756657)
chr5 (112-210)||(2270806-2270905)
chr5 (89-191)||(5512682-5512785)
chr5 (93-216)||(19189387-19189510)
chr5 (89-220)||(29665820-29665950)
chr5 (89-136)||(34901657-34901704)
chr5 (89-147)||(16432658-16432716)
chr5 (91-216)||(13544093-13544218)
chr5 (144-216)||(28770001-28770074)
chr5 (144-216)||(33001522-33001595)
chr5 (144-216)||(34859489-34859562)
chr5 (149-216)||(32624455-32624523)
chr5 (116-219)||(329018-329121)
chr5 (89-205)||(6260307-6260424)
chr5 (89-136)||(7080470-7080517)
chr5 (169-216)||(8068400-8068447)
chr5 (144-210)||(13588919-13588986)
chr5 (169-216)||(15726204-15726251)
chr5 (169-216)||(23189148-23189195)
chr5 (169-216)||(25684342-25684389)
chr5 (169-216)||(31236669-31236716)
chr5 (169-216)||(32063606-32063653)
chr5 (89-168)||(36427905-36427983)
chr5 (92-205)||(13119089-13119202)
chr5 (89-210)||(14967516-14967637)
chr5 (89-205)||(27980064-27980180)
chr5 (144-216)||(37963049-37963122)
chr5 (172-216)||(10688672-10688716)
chr5 (92-205)||(34259829-34259943)
[»] chr6 (42 HSPs)
chr6 (89-205)||(1705896-1706012)
chr6 (89-210)||(10887809-10887930)
chr6 (95-211)||(229817-229932)
chr6 (88-220)||(926819-926950)
chr6 (95-211)||(21998899-21999014)
chr6 (98-216)||(24081154-24081272)
chr6 (93-210)||(7344325-7344442)
chr6 (89-216)||(1339653-1339779)
chr6 (88-210)||(31644409-31644531)
chr6 (89-139)||(14507977-14508027)
chr6 (91-216)||(16893178-16893302)
chr6 (89-205)||(19473962-19474078)
chr6 (89-205)||(21294080-21294196)
chr6 (88-139)||(2994321-2994372)
chr6 (89-220)||(6295655-6295784)
chr6 (89-220)||(6302465-6302594)
chr6 (89-139)||(10965980-10966030)
chr6 (89-211)||(14002398-14002519)
chr6 (94-220)||(14872332-14872457)
chr6 (89-211)||(24151124-24151245)
chr6 (89-190)||(29023619-29023720)
chr6 (89-205)||(24249096-24249212)
chr6 (119-209)||(6974748-6974841)
chr6 (89-204)||(33574643-33574759)
chr6 (89-204)||(33574821-33574937)
chr6 (89-205)||(4509720-4509835)
chr6 (144-216)||(9226480-9226553)
chr6 (90-210)||(15383204-15383324)
chr6 (144-216)||(34315179-34315252)
chr6 (144-211)||(26811042-26811110)
chr6 (169-216)||(1339133-1339180)
chr6 (169-216)||(16989193-16989240)
chr6 (169-216)||(18871202-18871249)
chr6 (169-216)||(27719085-27719132)
chr6 (169-216)||(32518828-32518875)
chr6 (169-216)||(33954731-33954778)
chr6 (169-216)||(35224910-35224957)
chr6 (89-211)||(11273384-11273505)
chr6 (89-190)||(21970612-21970713)
chr6 (142-211)||(3953954-3954023)
chr6 (144-216)||(29638789-29638862)
chr6 (143-187)||(24251329-24251373)
[»] scaffold0325 (1 HSPs)
scaffold0325 (95-220)||(1220-1344)
[»] scaffold0072 (1 HSPs)
scaffold0072 (92-216)||(47578-47702)
[»] scaffold0009 (1 HSPs)
scaffold0009 (89-205)||(214430-214546)
[»] scaffold0667 (1 HSPs)
scaffold0667 (89-205)||(122-239)
[»] scaffold0067 (1 HSPs)
scaffold0067 (95-220)||(41666-41790)
[»] scaffold0271 (1 HSPs)
scaffold0271 (89-168)||(16988-17067)
[»] scaffold0721 (1 HSPs)
scaffold0721 (89-216)||(6585-6714)
[»] scaffold0493 (1 HSPs)
scaffold0493 (169-216)||(1666-1713)
[»] scaffold0349 (1 HSPs)
scaffold0349 (169-216)||(8507-8554)
[»] scaffold0022 (1 HSPs)
scaffold0022 (169-216)||(166500-166547)
[»] scaffold0923 (1 HSPs)
scaffold0923 (89-159)||(22-91)
[»] scaffold0005 (2 HSPs)
scaffold0005 (169-211)||(291907-291949)
scaffold0005 (130-202)||(271010-271083)


Alignment Details
Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 50631592 - 50631720
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||| || ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||      
T  50631592 ggggaacttctacggtacacatcacaaattgaggtgcaccggtaatcctgctccataaatgtataaattaacattcattttatgaaataaaaagctatcc 50631691  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
    |||||||||||||||||||||||||||||    
T  50631692 gtcattaattatattttagaaaacttcat 50631720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 49982456 - 49982587
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||| |||||||||||| ||||||||||||||||  |||||||||    
T  49982456 gggaacttctacggtacacctcataaattgaggtgtaccgatactcctgctatataaatttataaattaacaatcattttatgaaataagtagctatttg 49982555  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| || ||||||||||||||||  |||||||    
T  49982556 tcaatatttatattttagaaaacaccatctca 49982587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 23539942 - 23540069
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| ||||||| |||  |||||||||||   |||| |||||||||||||||||||||    
T  23539942 gggaacttctacggtacacctcagaaattgaggtgtaccggtactcttgctctaaaaaattataaattaacgaccattctatgaaataaaaagctatttg 23540041  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    | | |  |||||||||||||||| ||||    
T  23540042 ttaatgcttatattttagaaaacatcat 23540069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 47458934 - 47458813
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| |||||||||| | ||||||||||||||||   | ||||||    
T  47458934 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaataatcattttatgaaataagttgttatttg 47458836  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| ||||||||||||||||    
T  47458835 tcattatttatattttagaaaac 47458813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 17203153 - 17203024
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| |||| ||||  ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  17203153 gggagcttctacggtacacctcataaattgaggtgtaccgatact--tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 17203056  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  17203055 tcattatttatattttagaaaacaccatctca 17203024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 41568850 - 41568720
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||| ||||| |||| ||||| |||| ||||||| ||||||||||   ||||||||||||||||   | ||||||    
T  41568850 gggagcttctacggtacacctcacaaatttaggtgtaccgatactc-tgctttataaatttataaattaatgatcattttatgaaataagttgttatttg 41568752  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  41568751 tcattatttatattttagaaaacaccatctca 41568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 30546791 - 30546892
Alignment:
Q  115 attgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttc 214  Q
    ||||||||| | ||||||||  ||||||||||| ||||||||||   |||||||||||||||||||| |||| |||| || |||||||||||||||| ||    
T  30546791 attgaggtgtatcggtactctcgctctataaatttataaattaaagatcattttatgaaataaaaagatattagtcaatatttatattttagaaaacatc 30546890  T
Q  215 at 216  Q
    ||    
T  30546891 at 30546892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 39084709 - 39084840
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| ||||||||||| |||||| ||||||||||| | || ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | |||||    
T  39084709 ggggagcttctacggtacacctcacaaattgaggtgtatcgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttattt 39084807  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
    ||||||| ||||||||||||||||  |||||||    
T  39084808 gtcattatttatattttagaaaacaccatctca 39084840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 32912211 - 32912337
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||| ||| |||||| ||||||||||| | ||||||||   ||  |||||| |||||||||||  |||||||| |||||||| |||||||||    
T  32912211 gggaacttctacagtacacctcacaaattgaggtgtatcggtactctcacttcataaatttataaattaacgatcattttaagaaataaatagctatttg 32912310  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    |||   ||||||||||||||||| ||||    
T  32912311 tca-acattatattttagaaaacatcat 32912337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 46283179 - 46283049
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||| ||||| | || ||||| |||| ||||||| ||||||||||   ||||||||||||||||   | ||||||    
T  46283179 gggagcttctacggtacacctcacaaatttaggtgtatcgatactc-tgctttataaatttataaattaatgatcattttatgaaataagttgttatttg 46283081  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  46283080 tcattatttatattttagaaaacaccatctca 46283049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 38862515 - 38862441
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||| |||||||||||  |||||||||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  38862515 ataaatttataaattaacgatcattttatgaaataaaaagttatttgtcaatatttatattttagaaaacatcat 38862441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 40868134 - 40868255
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| |||| |||| |||||  |||||| ||||||||||   ||||||| ||||||||   | |||||     
T  40868134 gggagcttctacggtacacctcataaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatcattttttgaaataagttgttattta 40868232  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| ||||||||||||||||    
T  40868233 tcattatttatattttagaaaac 40868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 35533878 - 35533994
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||| ||| |||||| ||||| ||||| |||| ||||| |||| ||||||| ||||||||||   ||||||||||||||||   | |||||||||||    
T  35533878 cttctaccgtacacctcacaaatttaggtgtaccgatactc-tgctttataaatttataaattaatgatcattttatgaaataagttgttatttgtcatt 35533976  T
Q  194 aattatattttagaaaac 211  Q
    | ||||||||||||||||    
T  35533977 atttatattttagaaaac 35533994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 51873280 - 51873404
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||| ||||||||||| || | ||||| ||||  |||||| ||||||||||   ||||||||||| ||||   | ||||||||||||    
T  51873280 ttctacggtacacctcacaaattgaggtgtacagatactc-tgcttcataaatttataaattaatgatcattttatgagataagttgttatttgtcatta 51873378  T
Q  195 attatattttagaaaacttcatctca 220  Q
     |||||||||||||||| ||||||||    
T  51873379 tttatattttagaaaacatcatctca 51873404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 8096599 - 8096730
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||| | ||| ||||||| ||  ||| |  ||||  ||||||  ||||||||||| | ||||||||||||||||| ||||||     
T  8096599 gggaacttctacggtacacctaacaaaatgaggtgtacaagtatttttgcttcataaattgataaattaacaattattttatgaaataaaaatctattta 8096698  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  |||||||||||||||| ||||||||    
T  8096699 tcaatgtttatattttagaaaacatcatctca 8096730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 26423845 - 26423968
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| |||||||||||| ||||| |||||||||||| ||  | |||| ||||| |||| | | ||||||||||||||| || ||||  ||      
T  26423845 acttctacggtacacctcataaattaaggtgtaccggtactcctacttcaaaaatttataatttaataattattttatgaaataaagagttattcatcga 26423944  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  26423945 tatttatattttagaaaacatcat 26423968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 33986227 - 33986153
Alignment:
Q  141 tataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||| |||||||||||  ||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||    
T  33986227 tataaatttataaattaacgatcattttatgaaataaatagctatttgtcaat-attatattttagaaaacatcat 33986153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 34410950 - 34411080
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| |||||| |||| |||||| ||||||||||| |||| ||||| | ||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  34410950 gggagcttctatggtacacctcacaaattgaggtgtaccgatactc-tacttcataaatttataaattaatgatcattttatgaaataagttgttatttg 34411048  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  34411049 tcattatttatattttagaaaacaccatctca 34411080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 41541501 - 41541595
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttag 206  Q
    ||||||||||| |||||||||| ||||  |||||| ||| |||||||  ||||||| |||||||||| |||||||||||| || |||||||||||    
T  41541501 aaattgaggtgtaccggtactcttgcttcataaatttatgaattaacgatcatttttatgaaataaagagctatttgtcaatatttatattttag 41541595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 46918753 - 46918668
Alignment:
Q  125 accggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||||||||| ||||  |||||| |||||||||||  |||||||||||||| || |||||||||||| || ||||||||||||||||    
T  46918753 accggtactcttgcttcataaatttataaattaacgatcattttatgaaat-aagagctatttgtcaatatttatattttagaaaac 46918668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 24677553 - 24677673
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||| ||||  |||||||||||||||||| |||| || || ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  24677553 gggagcttctgcggtgcacctcataaattgaggtgtaccgatattc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 24677651  T
Q  189 tcattaattatattttagaaaa 210  Q
    |||||| |||||||||||||||    
T  24677652 tcattatttatattttagaaaa 24677673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 43916345 - 43916462
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||    
T  43916345 ggggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattt 43916444  T
Q  188 gtcattaattatatttta 205  Q
     ||  || ||||||||||    
T  43916445 atccatatttatatttta 43916462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 44979281 - 44979152
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctct-ataaatgtataaattaacattcattttatgaaataaaaagctatt 186  Q
    |||| |||||||||||| |||||||||||| ||||| || ||||||||| || | | |||| ||||| |||||  | ||||||||||||||| || ||||    
T  44979281 gggggacttctacggtacacctcataaattaaggtgtactggtactcctactttaaaaaatttataatttaacgattattttatgaaataaagagttatt 44979182  T
Q  187 tgtcattaattatattttagaaaacttcat 216  Q
      ||| || |||||||||||||||| ||||    
T  44979181 catcaatatttatattttagaaaacatcat 44979152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 20280568 - 20280500
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  20280568 tataaattaacaatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 20280500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 40054994 - 40054878
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||| ||||||| || |||||     
T  40054994 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttataaaataaagagttattta 40054895  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  40054894 tcaatatttatatttta 40054878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 13216093 - 13216223
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| | ||| |||||||||||| |||| ||||| |||| ||||||  | ||||||||   ||||||||||||||||   | |||||     
T  13216093 gggagcttctacggtatatctcttaaattgaggtgtaccgatactc-tgctttataaaattttaaattaatgatcattttatgaaataagttgttattta 13216191  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  13216192 tcattatttatattttagaaaacaccatctca 13216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 47209414 - 47209319
Alignment:
Q  125 accggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctca 220  Q
    |||||||||| ||||  ||| ||  ||||||||||| | ||||||||||||||||| |||||| ||| |  |||||||||||||||| ||||||||    
T  47209414 accggtactcttgcttcatagattgataaattaacaattattttatgaaataaaaatctatttatcaatgtttatattttagaaaacatcatctca 47209319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 50533904 - 50534025
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| | || ||||| ||||  |||||| ||||||||||    |||||||||||||||   | ||||||    
T  50533904 gggagcttctacggtacacctcacaaattgaggtgtatcgatactc-tgcttcataaatttataaattaaagaccattttatgaaataagttgttatttg 50534002  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| |||||||||| |||||    
T  50534003 tcattatttatattttaaaaaac 50534025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 1845072 - 1845189
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||  | | |  || || |||||  | ||||||||||||||| || |||||    
T  1845072 ggggaacttctacggtgcacctcacaaattgaggtgtaccggtactcctgcttcaaatacttacaatttaacgattattttatgaaataaagagttattt 1845171  T
Q  188 gtcattaattatatttta 205  Q
     ||| || ||||||||||    
T  1845172 atcaatatttatatttta 1845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 48313316 - 48313429
Alignment:
Q  98 tacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaatt 197  Q
    ||||||| |||||| ||||||||||| | || ||||| |  ||||||||| |||||||||||   ||||| || ||||||||| |||||||  | || ||    
T  48313316 tacggtacacctcacaaattgaggtgtatcgatactcttattctataaatttataaattaactaccatttcataaaataaaaaactatttgataatattt 48313415  T
Q  198 atattttagaaaac 211  Q
    ||||||||||||||    
T  48313416 atattttagaaaac 48313429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 48868117 - 48868190
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||| ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  48868117 aaatatataaattaacaatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 48868190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 28094838 - 28094906
Alignment:
Q  149 tataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  28094838 tataaattaacgattatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 28094906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 30548014 - 30547895
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgt 189  Q
    |||||||||||||| || || |||||||||||| || ||||||| ||||  |||||| |||||| ||||  ||| |||||||||||||| || |||||||    
T  30548014 gaacttctacggtacac-tcgtaaattgaggtgtacaggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgt 30547916  T
Q  190 cattaattatattttagaaaa 210  Q
    |   | |||||||||||||||    
T  30547915 cgacatttatattttagaaaa 30547895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 33234114 - 33234182
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||||||| ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33234114 tataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 33234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 33771706 - 33771774
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||||||| ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33771706 tataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 33771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 39871385 - 39871512
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| | |||| ||||||||||| |||| |||||| |||  |||||| |||||| |||   ||||||||||||||||   | |||||     
T  39871385 gggagcttctacggtagatctcacaaattgaggtgtaccgatactcc-gcttcataaatttataaagtaatgatcattttatgaaataagttgttattta 39871483  T
Q  189 tcattaattatattttagaaaacttcatc 217  Q
    |||||  |||||||||||||||| |||||    
T  39871484 tcattttttatattttagaaaacatcatc 39871512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 41550207 - 41550275
Alignment:
Q  149 tataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  41550207 tataaattaacgattatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 41550275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 43146823 - 43146702
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| ||||||  |||||||||| || ||||||||| ||  | |||| ||||| |||||  | ||||||||||||||| || ||||  |||     
T  43146823 acttctacggtacacctca--aattgaggtgtactggtactcctacttcaaaaatttataatttaacgattattttatgaaataaagagttattcatcaa 43146726  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  43146725 tatttatattttagaaaacatcat 43146702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 45650414 - 45650298
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||| |||  | | || || || |||||  | ||||||||||||||| || |||||     
T  45650414 gggaacttctacggtatacctcacaaattgagatgtaccggtactccagcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 45650315  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  45650314 tcaatatttatatttta 45650298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 9588050 - 9587933
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||||||| ||||||  |||||||||||||||  |||| | ||||||||||   | |  |||||||||||||| |||||||    
T  9588050 gggaacttctacggtacac-tcataaagtgaggtataccggtactcctgcttcataattttataaattaatgattatcttttatgaaataaatagctatt 9587952  T
Q  187 tgtcattaattatatttta 205  Q
    ||| | || ||||||||||    
T  9587951 tgttaatatttatatttta 9587933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 25702435 - 25702552
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatg--aaataaaaagctatt 186  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| ||||  |||| | ||||||| |||  ||||||| ||  ||||||| | |||||    
T  25702435 gggaacttctacggtacac-tcataaattgaggtgtaccggtactcttgcttcataattttataaatcaacgatcattttttgtaaaataaataactatt 25702533  T
Q  187 tgtcattaattatatttta 205  Q
    |||||  | ||||||||||    
T  25702534 tgtcaacatttatatttta 25702552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 34038163 - 34038276
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttg 188  Q
    |||||||||||||| || ||| ||| ||||||| |||||||||||||||  |||| | |||||||||||  |||  |||||||||||||| || ||||||    
T  34038163 gaacttctacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgaaataaatagttatttg 34038261  T
Q  189 tcattaattatattt 203  Q
    | | || ||||||||    
T  34038262 ttaatatttatattt 34038276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 35912633 - 35912762
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||| | ||| | || |||||| |||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  35912633 gggagcttctacggtacacctcacaaattaatgtgtatcgatactcc-gcttcataaatttataaattaatgatcattttatgaaataatt-gttatttg 35912730  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  35912731 tcattatttatattttagaaaacaccatctca 35912762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 36735512 - 36735615
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcc-tgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||||| |||| |||||||  ||||||| |   | |||||| ||| |||| ||||||||    
T  36735512 gggaacttctacggtacacctcataaattggagtgtaccggtactccttgctttataaattgataaatttatgattattttaggaagtaaagagctattt 36735611  T
Q  188 gtca 191  Q
    ||||    
T  36735612 gtca 36735615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 38261209 - 38261093
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||||||| ||||||| |||||||||||||||  |||| | ||| |||||||  |||  ||||||| |||||| |||||||    
T  38261209 gggaacttctacggtacac-tcataaagtgaggtgtaccggtactcctgcttcataattttat-aattaacgatcattttttatgtaataaatagctatt 38261112  T
Q  187 tgtcattaattatatttta 205  Q
    |||||  | ||||||||||    
T  38261111 tgtcaacatttatatttta 38261093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 46707362 - 46707445
Alignment:
Q  108 ctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctatttgtc 190  Q
    |||||||||| ||||| |||||||||||||||   ||||| |||  ||||||| || |||||||||||||||||| ||||||||    
T  46707362 ctcataaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgtc 46707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 12178982 - 12178884
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||| |||||||||| ||||   ||||| ||||||||||| ||| ||||||||||||||| || |||||| |   | |||||||||||||||    
T  12178982 aaattgaggtgtaccggtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttatttgccgacatttatattttagaaaa 12178884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 14077683 - 14077605
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||||| ||||||||||||||||  || ||||||||| |  |||||||||| |||||  |||||||    
T  14077683 ataaatttataaattaacaatcattttatgaaataagtagttatttgtcaatgtttatattttaaaaaacaccatctca 14077605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 24511985 - 24511864
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    ||||| |||||||||| || || |||||||||||| |||||||||| ||||  |||||| |||||| |||| ||  ||||||||||||||| || |||||    
T  24511985 gggaatttctacggtacac-tcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactaacgatcaattttatgaaataaatagttattt 24511887  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||    | |||||||||||||||    
T  24511886 gttggcatttatattttagaaaa 24511864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 38207529 - 38207579
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgct 139  Q
    |||||||||||||||| |||||||||||||||||| | ||||||| |||||    
T  38207529 gggaacttctacggtacacctcataaattgaggtgtatcggtacttctgct 38207579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 51610536 - 51610637
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |  || |||||||||||| | |||||||| ||||  |||||| |||||| ||||| || ||||||||||||||| || |||||    
T  51610536 gggaacttctacggtacat-tcgtaaattgaggtgtatcggtactcttgcttcataaatttataaactaacaatcaattttatgaaataaatagttattt 51610634  T
Q  188 gtc 190  Q
    |||    
T  51610635 gtc 51610637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 9222909 - 9222982
Alignment:
Q  144 aaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| ||||||||||| |||  ||| ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  9222909 aaatttataaattaacgattactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 9222982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 9259871 - 9259944
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  9259871 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 9259944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 17376707 - 17376634
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  17376707 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 17376634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 37765308 - 37765381
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| ||||||||||   |||||||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  37765308 aaatatataaattaaagatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 37765381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 40850373 - 40850300
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  40850373 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 40850300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 41321357 - 41321284
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  41321357 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 41321284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 48481201 - 48481128
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  48481201 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 48481128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 5957256 - 5957371
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| |||||| || | |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||    |||||||||||||||   | ||||||    
T  5957256 gggagcttctatggcacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaaagaccattttatgaaataagttgttatttg 5957354  T
Q  189 tcattaattatatttta 205  Q
    |||||| ||||||||||    
T  5957355 tcattatttatatttta 5957371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 7435920 - 7435805
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| | |||||||||| || |  | || || || |||||  | |||||||||||||||||| |||||     
T  7435920 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctcct-tcaatatttacaatttaacgattattttatgaaataaaaagttattta 7435822  T
Q  189 tcattaattatatttta 205  Q
    ||  || ||||||||||    
T  7435821 tccatatttatatttta 7435805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 12838176 - 12838060
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||||||| |||| |||| | ||| ||||||| |||||||||| | || |||||||  |||| | |||  | ||||||||||||||||||| ||||     
T  12838176 gggaacttctaaggtacacctaacaaaatgaggtgtaccggtactcttcctttataaattgataagtgaacgattattttatgaaataaaaagcgattta 12838077  T
Q  189 tcattaattatatttta 205  Q
    ||| |  ||||||||||    
T  12838076 tcaatgtttatatttta 12838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 27802164 - 27802096
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || ||||||||||||||||    
T  27802164 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaac 27802096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 51004790 - 51004918
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaatt-aacattcattttatgaaataaaaagctattt 187  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||||| ||  | |||| ||||| || |||  | ||||||| ||||||| || |||||    
T  51004790 gggaatttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaaaatttataatttaaacgattattttataaaataaagagttattt 51004889  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
     | | || |||||||||| ||||| ||||    
T  51004890 ataaatatttatattttataaaacatcat 51004918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 52180637 - 52180507
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttg 188  Q
    ||||||||| |||| || ||| ||| ||||||| |||||||||||||||  |||| | |||||||||||  | |  ||||||| |||||| |||||||||    
T  52180637 gaacttctatggtatac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttg 52180539  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||  | |||||||||| | ||| ||||||||    
T  52180538 tcaaaatttatattttatagaacatcatctca 52180507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 3150266 - 3150313
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  3150266 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 3150313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 5360201 - 5360323
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| ||||||||||| |||||| ||||||||||| | |  |||| |||||  |||||| ||||||||||   | ||||||||||||||   | |||||    
T  5360201 ggggagcttctacggtacacctcacaaattgaggtgtatcaatact-ctgcttcataaatttataaattaaagattattttatgaaataagttgttattt 5360299  T
Q  188 gtcattaattatattttagaaaac 211  Q
    || |||| |||||||||| |||||    
T  5360300 gttattatttatattttaaaaaac 5360323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 7426741 - 7426788
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  7426741 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 7426788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 12105160 - 12105277
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||| ||||  |||| | |||||||||||  | |  ||||||| |||||| || ||||    
T  12105160 gggaacttctacggtacac-tcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatgtaataaatagttatt 12105258  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  12105259 tgtcaatatttatatttta 12105277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 29877702 - 29877749
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    |||||||||||||||| ||||||||||||  |||| ||||||||||||    
T  29877702 gggaacttctacggtacacctcataaatttgggtgtaccggtactcct 29877749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 33828945 - 33828992
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33828945 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 33828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 33839021 - 33838974
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33839021 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 33838974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 34100735 - 34100834
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||| |||||||||  ||||  |||||| |||||| ||||  ||| |||||||||||||| || ||||||||   | |||||||||||||||    
T  34100735 taaattgaggtgtaccggtactattgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcgacatttatattttagaaaa 34100834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 39853285 - 39853238
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  39853285 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 39853238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 42958863 - 42958962
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||| || |||||||||| ||||  |||||| |||||| ||||  ||| |||||||||||||| || ||||||||   | |||||||||||||||    
T  42958863 taaattgagatgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaaa 42958962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 43224726 - 43224773
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  43224726 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 43224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 44264063 - 44263946
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||| ||||||||| || ||| ||| ||||||| ||||||||||||| |  |||| | |||||||||||  |||  ||||||| |||||| |||| ||    
T  44264063 gggaacatctacggtacac-tcacaaagtgaggtgtaccggtactcctgtttcataattttataaattaacgatcattttttatgtaataaatagctctt 44263965  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  44263964 tgtcaatagttatatttta 44263946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 1658630 - 1658672
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  1658630 atgaaataaaaaggtatttgtcaatatttatattttagaaaac 1658672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 17525824 - 17525742
Alignment:
Q  109 tcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctatttgtc 190  Q
    ||||||||| ||||| | |||||||||||||   ||||| |||| ||||||| || ||||||||||||||| || ||||||||    
T  17525824 tcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtc 17525742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 24230569 - 24230701
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| | |||| ||| ||||||| |  ||||||||||||  |||| | |||||||||||  | |  ||||||| |||||| |||||||    
T  24230569 gggaacttctacggtaca-ctcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatt 24230667  T
Q  187 tgtcattaattatattttagaaaacttcatctca 220  Q
    |||||  | |||||||||| | ||| ||||||||    
T  24230668 tgtcaaaatttatattttatagaacatcatctca 24230701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 33910096 - 33909975
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    ||||| |||||||||| ||| || ||||| ||||| |||||||||||| ||  | |||| | ||||||||| |||  ||||||| |||||| ||||||||    
T  33910096 gggaatttctacggtacacc-cacaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattgtttttatggaataaagagctattt 33909998  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   || |||||||||||||||    
T  33909997 gttgatatttatattttagaaaa 33909975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 35873936 - 35874068
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| |||| || ||||||||| |||||  |||| | |||||||||||  |||  ||||||| |||||| | |||||    
T  35873936 gggaacttctacggtacac-tcacaaagtgagatgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaataactatt 35874034  T
Q  187 tgtcattaattatattttagaaaacttcatctca 220  Q
    |||||  | |||||||||| | ||| ||||||||    
T  35874035 tgtcaaaatttatattttatagaacatcatctca 35874068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 44808811 - 44808761
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgct 139  Q
    |||||||||||||||| | |||| ||||||||||| |||| ||||||||||    
T  44808811 gggaacttctacggtacatctcacaaattgaggtgtaccgatactcctgct 44808761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 10635300 - 10635373
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||| | || |||||||||||||||| ||||    
T  10635300 aaatatataaattaacgatcactttaatgaaataaaaagatatttgttaatatttatattttagaaaacatcat 10635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 22821600 - 22821527
Alignment:
Q  144 aaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| ||||||||||| |||  ||||||||||||||||  ||||||||| || |||||||||| ||||| ||||    
T  22821600 aaatttataaattaacgattatttttatgaaataaaaaattatttgtcaatatttatattttaaaaaacatcat 22821527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 24247857 - 24247930
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||| ||||| ||||    
T  24247857 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttataaaacatcat 24247930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 29171517 - 29171444
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||| | || |||||||||||||||| ||||    
T  29171517 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcat 29171444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 31571052 - 31571093
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  31571052 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 31571093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 44647300 - 44647373
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| ||||||||||   |||||||| |||||||||||| ||||||| | || |||||||||||||||| ||||    
T  44647300 aaatatataaattaaagatcattttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcat 44647373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 47693587 - 47693491
Alignment:
Q  108 ctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||| ||| ||||||| |||||||||| ||||  |||| | |||||||||||  | ||||| || |||||| |||||||||||| || ||||||||||    
T  47693587 ctcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataatttt-tgtaataaatagctatttgtcaatatttatatttta 47693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 4156188 - 4156140
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    ||||||||||||||||| |||||| ||||||  ||| ||||||||||||    
T  4156188 ggggaacttctacggtacacctcacaaattggagtgtaccggtactcct 4156140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 44382019 - 44382118
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgt 189  Q
    |||||| ||||||| || ||||||||| ||||| |||||||||| || |   ||||| |||  ||||||| ||| ||||||||||||||||| |||||||    
T  44382019 gaacttttacggtacac-tcataaattaaggtgtaccggtactcatgtttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgt 44382117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 47860836 - 47860876
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaa 209  Q
    ||||||||||||| ||||||||| || ||||||||||||||    
T  47860836 atgaaataaaaaggtatttgtcaatatttatattttagaaa 47860876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 49739477 - 49739409
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||||||| || |||||||||  ||||||||| || |||||||||||||||| ||||    
T  49739477 tataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcat 49739409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 2859359 - 2859485
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| || ||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  2859359 gggaacttctacggtacatctcataaattgaggtgtaccggtactcttgttctataaatttataaattaac-gtcattttatgaaataaaaagctatttg 2859457  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || |||| ||||||||||| ||||    
T  2859458 tcaatatttatgttttagaaaacatcat 2859485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 45690499 - 45690620
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||| |    
T  45690499 gggaacttctacggtacacctcacaaattgaggtgtaccggtactctcgctctataaatttataaattaaggatcattttatgaaataaaaagctattag 45690598  T
Q  189 tcattaattatattttagaaaa 210  Q
    ||| || |||||||||||||||    
T  45690599 tcaatatttatattttagaaaa 45690620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 25740393 - 25740271
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||| || |  |||||  ||||||||| |  |||||||||||||||||||||||||||    
T  25740393 gggaacttctacggtatacctcataaattgaggtgtaccgatactcttgtttcataaaattataaattaccgatcattttatgaaataaaaagctatttg 25740294  T
Q  189 tcattaattatattttagaaaac 211  Q
    ||| || ||||||||||||||||    
T  25740293 tcaatatttatattttagaaaac 25740271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 11088632 - 11088507
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaag---ctat 185  Q
    |||||||||||||||| |||||| ||||||||||| ||| |||||| | ||| |||||| |||||||||||| ||||||||||||||||||||   ||||    
T  11088632 gggaacttctacggtacacctcacaaattgaggtgtaccagtactcttcctccataaatttataaattaacaatcattttatgaaataaaaagttactat 11088533  T
Q  186 ttgtcattaattatattttagaaaac 211  Q
    |||||| || |||||||| |||||||    
T  11088532 ttgtcaatatttatatttcagaaaac 11088507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 38073106 - 38073232
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| | ||  |||||| |||||||||||  ||||||||||||||||| || ||||||    
T  38073106 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatcattttatgaaataaatagatatttg 38073205  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| | ||||||||||||||||| ||||    
T  38073206 tcaat-attatattttagaaaacatcat 38073232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 37781865 - 37781993
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||| |||||| ||||||||||| ||  |||||| | ||  |||||| ||||||| |||  ||||||||||||||||| ||||||||    
T  37781865 ggggaacttctacggtacacctcacaaattgaggtgtacatgtactcttccttcataaatttataaatgaacgatcattttatgaaataaagagctattt 37781964  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
    |||| || |||| ||||||||||| ||||    
T  37781965 gtcaatatttatgttttagaaaacatcat 37781993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 42640849 - 42640976
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||| | |||||| ||||||||||  |||||||||| | ||  |||||| |||||||||||  ||||||||||||||||| || |||||    
T  42640849 ggggaacttctacggcacacctcacaaattgaggtataccggtactcttacttcataaatttataaattaacgatcattttatgaaataaataggtattt 42640948  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
    |||| | ||||||||||||||||| ||||    
T  42640949 gtcaat-attatattttagaaaacatcat 42640976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 12182965 - 12182834
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||| | ||| ||||||| |||||||||| | || |||||||  ||||||||||  | ||||||||||||||||| ||||||     
T  12182965 gggaacttctacggtacacctaacaaaatgaggtgtaccggtactcttactttataaattgataaattaacgattattttatgaaataaaaaactattta 12182866  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  |||||||||||||||| ||||||||    
T  12182865 tcaatgtttatattttagaaaacatcatctca 12182834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 40287706 - 40287833
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||  ||| |||||||||||||||||| | || ||||| ||||| |||||  |||||||||||  |||||| |||||||||||||||||||     
T  40287706 gggaacttctattgtacacctcataaattgaggtgtatcgatactcttgctccataaaattataaattaacgatcatttcatgaaataaaaagctatttt 40287805  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || |||||||||| ||||| ||||    
T  40287806 tcaatatttatattttaaaaaacatcat 40287833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 15362468 - 15362585
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||||  | | || ||||| |||||  | ||||||||||||||| || |||||    
T  15362468 ggggaacttctacggtacaccttataaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgattattttatgaaataaagagttattt 15362567  T
Q  188 gtcattaattatatttta 205  Q
     ||| || ||||||||||    
T  15362568 atcaatatttatatttta 15362585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 5615790 - 5615668
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||||||||| || |||||||||||||||||| | |||||||| | ||   ||||| |||||||||||   ||||| || |||||||||||||||||    
T  5615790 gggaacttctacgatacacctcataaattgaggtgtatcggtactcttacttcttaaatttataaattaactaccatttcataaaataaaaagctatttg 5615691  T
Q  189 tcattaattatattttagaaaac 211  Q
      | || ||||||||||||||||    
T  5615690 ataatatttatattttagaaaac 5615668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 28318041 - 28318162
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| || |  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  28318041 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgtttcataaatttataaattaatgatcattttatgaaataagttgttatttg 28318139  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| ||||||||||||||||    
T  28318140 tcattatttatattttagaaaac 28318162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 41555431 - 41555547
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  41555431 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 41555530  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  41555531 tcaatatttatatttta 41555547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 2283218 - 2283297
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctcac 221  Q
    |||||| |||||||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||| |||| ||||    
T  2283218 ataaatttataaattaacgattattttatgaaataaatagctatttgtcaatatttatattttagaaaacatcatttcac 2283297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 4108712 - 4108582
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| | |||  ||||||||||| |||| |||||| ||| ||||||| ||||||||||   ||||||||| |||||||  | ||||||    
T  4108712 gggagcttctacggtacatctcgcaaattgaggtggaccgatactcc-gctttataaatttataaattaatgatcattttataaaataaattgttatttg 4108614  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||| |||||||  |||||||    
T  4108613 tcattatttatatttcagaaaacaccatctca 4108582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 12071556 - 12071434
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    ||||||||| || |||||||||||||||||| |||||||||||| ||  | |||| ||| |||||||  | |||||||||| |||| || ||||| |||     
T  12071556 acttctacgttacacctcataaattgaggtgtaccggtactcctacttcaaaaatttat-aattaacgattattttatgaagtaaagagttatttatcaa 12071458  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  12071457 tatttatattttagaaaacatcat 12071434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 43359509 - 43359379
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||| ||||| |||| || |  |||| ||||||| ||||||||||   ||||||||||||||||   | ||||||    
T  43359509 gggagcttctacggtacacctcacaaatttaggtgtaccgatattt-tgctttataaatttataaattaatgatcattttatgaaataagttgttatttg 43359411  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  43359410 tcattatttatattttagaaaacaccatctca 43359379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 12002750 - 12002625
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgt 189  Q
    ||||||||||||||| |||||| ||||||||||| | ||||||| ||  | || |||| ||||| |||||  ||||||||||||||||| || || || |    
T  12002750 ggaacttctacggtacacctcacaaattgaggtgtatcggtacttctattttaaaaatttataatttaacgatcattttatgaaataaagagtta-ttat 12002652  T
Q  190 cattaattatattttagaaaacttcat 216  Q
    || || |||||||||||||||| ||||    
T  12002651 caatatttatattttagaaaacatcat 12002625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 8333891 - 8333994
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct-gctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||| |||  ||||||  ||||||| |   | |||||| ||| |||||||||||||    
T  8333891 gggaacttctacggtacacctcacaaattgaggtgtaccggtactccttgcttcataaattgataaatttatgattattttaggaagtaaaaagctattt 8333990  T
Q  188 gtca 191  Q
    ||||    
T  8333991 gtca 8333994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 8362405 - 8362528
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| |||||||||||||||||| || |||||||||  |  | |||| ||||| |||||  | ||||||||||||||| |  ||||  |||     
T  8362405 acttctacggtacacctcataaattgaggtgtactggtactcctatttcaaaaatttataatttaacgattattttatgaaataaagacttattcatcaa 8362504  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  8362505 tatttatattttagaaaacatcat 8362528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 33429539 - 33429409
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||| ||| |||||||||||||||||| |||| ||||| || |  |||||| ||||||||||   ||||||| ||||||||   | |||||     
T  33429539 gggagcttctacagtacacctcataaattgaggtgtaccgatactc-tgtttcataaatttataaattaatgatcattttttgaaataagttgttattta 33429441  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  33429440 tcattatttatattttagaaaacaccatctca 33429409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 26738384 - 26738311
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  |||||||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  26738384 aaatttataaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 26738311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 34188942 - 34188825
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||| |||| | ||||||||||| |||||||||||||||  | | || || || |||||  | |||||||||||| || || |||||    
T  34188942 ggggaacttctacggtacaccttacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaatgaagagttattt 34188843  T
Q  188 gtcattaattatatttta 205  Q
     ||| || ||||||||||    
T  34188842 atcaatatttatatttta 34188825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 8504056 - 8504158
Alignment:
Q  117 tgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | |||||||||||| ||||||||||||||||  |||    
T  8504056 tgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttgtcattatttatattttagaaaacaccat 8504154  T
Q  217 ctca 220  Q
    ||||    
T  8504155 ctca 8504158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 11986185 - 11986309
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| || | |||| |||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  11986185 gggagcttctacggtacacctcacaaattgaggtgtacggatact-ctgcttcataaatttataaattaattatcattttatgaaataagttgttatttg 11986283  T
Q  189 tc---attaattatattttagaaaac 211  Q
    ||   |||| ||||||||||||||||    
T  11986284 tcattattatttatattttagaaaac 11986309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 14947548 - 14947449
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||| || ||||||| |||| ||||||| |||||| |||| ||  ||||||||||||||| |  |||||||||  | |||||||||||||||    
T  14947548 taaattgaggtgtactggtactcttgctttataaatttataaactaacgatcaattttatgaaataaataattatttgtcagcatttatattttagaaaa 14947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 25712722 - 25712845
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| ||||||||||  |||||| |||| |||| || ||  | |||| ||||| |||||  | ||||||| ||||||| || ||||| |||     
T  25712722 acttctacggtacacctcataaaccgaggtgtaccgatacttctacttcaaaaatttataatttaacgattattttataaaataaagagttatttatcaa 25712821  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  25712822 tatttatattttagaaaacatcat 25712845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 35895311 - 35895428
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||| ||||||| || ||||||| ||||||| |||||||||||||||  |||| | |||||||||||   ||  ||||||| |||||| | |||||    
T  35895311 gggaacttttacggtacac-tcataaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactatt 35895409  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  35895410 tgtcaatatttatatttta 35895428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 7069548 - 7069470
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||   ||||||||||||||||   | |||||||||||| ||||||||||||||||  |||||||    
T  7069548 ataaatttataaattaatgatcattttatgaaataagttgttatttgtcattatttatattttagaaaacaccatctca 7069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 7366896 - 7366787
Alignment:
Q  101 ggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattata 200  Q
    |||| |||||| ||||||||||| ||||  |||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||| |||||| |||||    
T  7366896 ggtacacctcacaaattgaggtgtaccgaaactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttatcattatttata 7366798  T
Q  201 ttttagaaaac 211  Q
    |||||||||||    
T  7366797 ttttagaaaac 7366787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 17456195 - 17456141
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaat 147  Q
    |||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||    
T  17456195 acttctacggtacacctcataaattgaactgcaccggtactcttgctatataaat 17456141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 36428523 - 36428636
Alignment:
Q  106 acctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||||| ||||||||||| || | |||||| |||  |||||||||||||||||   ||||||||| ||||||     |||||||||||| ||||||||||    
T  36428523 acctcacaaattgaggtgtacggatactcc-gcttcataaatgtataaattaatgatcattttataaaataagttattatttgtcattatttatatttta 36428621  T
Q  206 gaaaacttcatctca 220  Q
    ||||||  |||||||    
T  36428622 gaaaacaccatctca 36428636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 38617728 - 38617848
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    ||||||||| |||||| || || |||||||||||| |||||||||| ||||   ||||| ||||||||||| ||| |||||||||||| || || |||||    
T  38617728 gggaacttcaacggtacac-tcgtaaattgaggtgtaccggtactcttgcttcgtaaatctataaattaacaattaattttatgaaat-aatagttattt 38617825  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||| | | |||| ||||||||||    
T  38617826 gtcgtcatttatgttttagaaaa 38617848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 1860279 - 1860206
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||| ||| |||| |||||||||||| ||||| ||| || |||||||||||||||| ||||    
T  1860279 aaatttataaattaacaatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcat 1860206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 6657797 - 6657724
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  6657797 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 6657724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 7504077 - 7504150
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  7504077 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 7504150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 15205796 - 15205869
Alignment:
Q  143 taaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||| |||||||||||  |||||||||||| |||| || ||||||||| |  |||||||||||||||| ||||    
T  15205796 taaatttataaattaacgatcattttatgaagtaaagaggtatttgtcaatgtttatattttagaaaacatcat 15205869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 39878974 - 39879047
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  39878974 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 39879047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 21425556 - 21425488
Alignment:
Q  149 tataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  |||||||  |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  21425556 tataaattaacgatcatttttgtgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 21425488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 2316919 - 2316966
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  2316919 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 2316966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 13568293 - 13568340
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  13568293 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 13568340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 15334090 - 15334205
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgt 189  Q
    |||| |||||||||| || ||| ||||||||||| ||||||| |||| ||  | |||| ||||| ||||   ||||||||||||||||| || | ||| |    
T  15334090 ggaatttctacggtacacttcacaaattgaggtgtaccggtattcctacttgaaaaatttataatttaatgatcattttatgaaataaatagttgtttat 15334189  T
Q  190 cattaattatatttta 205  Q
    || || ||||||||||    
T  15334190 caatatttatatttta 15334205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 16114486 - 16114565
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtc 190  Q
    |||||||||||| |||||||||| || || |||||| |||||| |||| ||  ||||||||||||||| || ||||||||    
T  16114486 taaattgaggtgtaccggtactcttgttccataaatctataaactaacgatcaattttatgaaataaatagttatttgtc 16114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 18576381 - 18576428
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  18576381 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 18576428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 22622430 - 22622545
Alignment:
Q  101 ggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattata 200  Q
    |||| |||||| |||||||||| ||| | ||||||||||  | ||||  |||| ||||   ||||||||||||||||| || ||||| ||| || |||||    
T  22622430 ggtacacctcacaaattgaggtacactgatactcctgcttcaaaaattgataatttaaagatcattttatgaaataaagagttatttatcaatatttata 22622529  T
Q  201 ttttagaaaacttcat 216  Q
    ||||| ||||| ||||    
T  22622530 ttttataaaacatcat 22622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 28394394 - 28394347
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  28394394 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 28394347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35292837 - 35292790
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  35292837 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 35292790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 36049519 - 36049586
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||| |||||||||| | ||| |||| |||||||||||| ||||||||| || |||||||||||||||    
T  36049519 aaatttataaattaataatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaa 36049586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 36192051 - 36192098
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  36192051 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 36192098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 37725877 - 37725830
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  37725877 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 37725830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 37989431 - 37989314
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| || ||| ||||| | ||| |||||||||| ||| | |||||  |||||||||||  | |||| |||||||||||| ||||||||||    
T  37989431 aacttctacggtacacttca-aaattaaagtgtaccggtactcttgcaccataaaattataaattaacgataattt-atgaaataaaaaactatttgtca 37989334  T
Q  192 ttaattatattttagaaaac 211  Q
     || |||| ||||| |||||    
T  37989333 atatttatgttttataaaac 37989314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 40533577 - 40533530
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  40533577 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 40533530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 6438172 - 6438293
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||||| | | |||||| |||||  ||||||||| |  |  | |||| ||||||||||| ||   |||||||||||||||||||||||    
T  6438172 gggaacttctacggtaaatc-cgtaaattaaggtgtgccggtactcttaattcaaaaatttataaattaactataatttttatgaaataaaaagctattt 6438270  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   || |||||||||||||||    
T  6438271 gttgatatttatattttagaaaa 6438293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 6513262 - 6513383
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| | ||  |||||| ||||| |||||||||||| || || |||  | ||||||||| |||  ||||||| |||||| ||||||||    
T  6513262 gggaacttctacggtacatctg-taaattaaggtgtaccggtactcctactttaaaaaaatttaaattaactattatttttatggaataaagagctattt 6513360  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   || |||||||||||||||    
T  6513361 gttgatatttatattttagaaaa 6513383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 41184869 - 41184772
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||| | || |||||| |||  |||||| ||||||||||   ||||||||||||||||   | ||||||| |||| ||||||||||||||||    
T  41184869 aaattgaggtgtatcgatactcc-gcttcataaatttataaattaatgatcattttatgaaataagttgttatttgttattatttatattttagaaaac 41184772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 713362 - 713475
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    |||||| |||||| || |||||||||||| || || |||||| || || || | || || || ||||| || ||||||||||||||| || ||||| |||    
T  713362 aacttccacggtacacttcataaattgagatgtactggtacttctactttaaatatttacaacttaacgtttattttatgaaataaagagttatttatca 713461  T
Q  192 ttaattatatttta 205  Q
     || ||||||||||    
T  713462 atatttatatttta 713475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 5084920 - 5084961
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  5084920 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 5084961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 16814932 - 16814973
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  16814932 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 16814973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 16854212 - 16854253
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  16854212 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 16854253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 19268642 - 19268687
Alignment:
Q  165 ttttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||||| |||||||||||  || |||||||||||||||    
T  19268642 ttttatgaaataaagagctatttgtcgatatttatattttagaaaa 19268687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 41840006 - 41839933
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||| ||| || |||||||||||||||| ||||    
T  41840006 aaatttataaattaacgatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcat 41839933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 14820245 - 14820177
Alignment:
Q  144 aaatgtataaattaacattcattt-tatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||| ||||||||||   |||||| ||||||||||||||| |||||||  || ||||||||||||||||    
T  14820245 aaatttataaattaatgatcatttatatgaaataaaaagcaatttgtccatatttatattttagaaaac 14820177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 17809063 - 17809123
Alignment:
Q  115 attgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaat 175  Q
    |||||||||||||||||||||||||  | | || ||||| |||||| | ||||||||||||    
T  17809063 attgaggtgcaccggtactcctgcttcaaatatttataatttaacaattattttatgaaat 17809123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 12801507 - 12801385
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| |||||||||||||||||| ||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||| |||| |    
T  12801507 cttctacggtacacctcataaattgaggtgtaccggtactctcgctctataaatttataaattaaagatcattttatgaaataaaaagctattagtcaat 12801408  T
Q  194 aattatattttagaaaacttcat 216  Q
    | |||||||||||||||| ||||    
T  12801407 atttatattttagaaaacatcat 12801385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 30777274 - 30777402
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtc 190  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||| ||| |||||||  ||||||||||||||||  || || ||||     
T  30777274 gaacttctacggtacacctcataaattgaggtgtaccgatactcctgctttataaatttatgaattaacgatcattttatgaaataagtagtta-ttgtt 30777372  T
Q  191 attaattatattttagaaaacttcatctca 220  Q
    | || |||||||||||||||| ||||||||    
T  30777373 aatatttatattttagaaaacatcatctca 30777402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 28886087 - 28885961
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgt 189  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||  | ||||||||| ||||||||||   | ||||||||||||||||||||||| ||    
T  28886087 ggaacttctacggtacacctcacaaattgaggtgtaccgatactctcgttctataaatttataaattaaggattattttatgaaataaaaagctattagt 28885988  T
Q  190 cattaattatattttagaaaacttcat 216  Q
     | || |||||||||||||||| ||||    
T  28885987 taatatttatattttagaaaacatcat 28885961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 12632904 - 12633027
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctg-ctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||||| | | |||| | |||||||||||| ||||||||||||||||  || |||||    
T  12632904 gggaacttctacggtacacctcacaaattgaggtgtaccgatactcctggcacaataattttataaattaacaatcattttatgaaataagtagttattt 12633003  T
Q  188 gtcattaattatattttagaaaac 211  Q
    |||| |  ||||||||||||||||    
T  12633004 gtcaatgtttatattttagaaaac 12633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 40547689 - 40547821
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||| |||| |||| | ||| ||||||| |||||||||| | ||  ||||||  ||||||||||| | ||||||||||||||||| ||||||    
T  40547689 ggggaacttctatggtacacctaacaaaatgaggtgtaccggtactcttacttcataaattgataaattaacaattattttatgaaataaaaatctattt 40547788  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
     ||| |  |||||||||||||||| ||||||||    
T  40547789 atcaatgtttatattttagaaaacatcatctca 40547821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 44636920 - 44637051
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| ||||||||||| |||||| ||||||||||| |||| || || ||||  |||||| ||||||||||   ||||||||||||||||   | |||||    
T  44636920 ggggagcttctacggtacacctcacaaattgaggtgtaccgatattc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttattt 44637018  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
    ||||||| ||||||||||||||||  |||||||    
T  44637019 gtcattatttatattttagaaaacaccatctca 44637051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 31893333 - 31893460
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||||||||| || |||||| ||||||||||| |||| |||||||| |  | |||| ||||| |||||  ||||||||||||||||| || |||||     
T  31893333 gggaacttctacgttacacctcacaaattgaggtgtaccgatactcctgtttcaaaaatttataatttaacgatcattttatgaaataaagagttattta 31893432  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || |||||||||| ||||| ||||    
T  31893433 tcaatatttatattttataaaacatcat 31893460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 5982184 - 5982304
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| || |||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  5982184 gggagcttctacggtacacctcacaagttgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 5982282  T
Q  189 tcattaattatattttagaaaa 210  Q
    |||||| |||||||||||||||    
T  5982283 tcattatttatattttagaaaa 5982304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 6804009 - 6804106
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| |||| |||| |||||||||||||||||| |||||||||| || |  | |||| ||||| |||||| |||||||||||||||||||| |||||    
T  6804009 ggaacatctatggtacacctcataaattgaggtgtaccggtactcttgattcaaaaatttataatttaacaatcattttatgaaataaaaagttattt 6804106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 34057829 - 34057950
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| | || |||| |||||  |||||| ||||||||||    |||||||||||||||   | ||||||    
T  34057829 gggagcttctacggtacacctcataaattgaggtgtatcgatact-ctgcttcataaatttataaattaaagaccattttatgaaataagttgttatttg 34057927  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| |||||||||| |||||    
T  34057928 tcattatttatattttaaaaaac 34057950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 34520975 - 34520846
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtc 190  Q
    |||||||||||||| |||||| ||||||||||| | || ||||||| ||  |||||| ||| |||||||  ||||||| ||||||||  || ||||||      
T  34520975 gaacttctacggtacacctcacaaattgaggtgtatcgatactcctacttcataaatttatgaattaacgatcatttt-tgaaataagtagttatttgat 34520877  T
Q  191 attaattatattttagaaaacttcatctcac 221  Q
    | || |||||||||||||||| |||||||||    
T  34520876 aatatttatattttagaaaacatcatctcac 34520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 37219012 - 37218877
Alignment:
Q  89 gggaacttctacggtaaacctcataa----attgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagcta 184  Q
    |||||||||||||||| |||||||||    ||||||||| || | ||||||||||  |||||| ||||||||||   | |||||||||| |||   | ||    
T  37219012 gggaacttctacggtacacctcataattaaattgaggtgtactgatactcctgcttcataaatttataaattaatgattattttatgaattaagttgtta 37218913  T
Q  185 tttgtcattaattatattttagaaaacttcatctca 220  Q
    ||||||| || |||||||||||||||| ||||||||    
T  37218912 tttgtcaatatttatattttagaaaacatcatctca 37218877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 43332144 - 43332021
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||||||||    
T  43332144 ttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaat-tataaattaatgatcattttatgaaataagttgttatttgtcatta 43332047  T
Q  195 attatattttagaaaacttcatctca 220  Q
     |||||||||| |||||  |||||||    
T  43332046 tttatattttaaaaaacaccatctca 43332021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 44309966 - 44309843
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||||||||    
T  44309966 ttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaat-tataaattaatgatcattttatgaaataagttgttatttgtcatta 44309869  T
Q  195 attatattttagaaaacttcatctca 220  Q
     |||||||||| |||||  |||||||    
T  44309868 tttatattttaaaaaacaccatctca 44309843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 38803781 - 38803713
Alignment:
Q  149 tataaattaacattca-ttttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  38803781 tataaattaacgatcacttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcat 38803713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 42194658 - 42194790
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||||||||| | || | ||| ||||||| ||||||| || | ||  ||||||  || |||||||  | |||| |||||||||||||||||||    
T  42194658 ggggaacttctacggtacatctaacaaaatgaggtgtaccggtattcttacttcataaattgattaattaacgattatttcatgaaataaaaagctattt 42194757  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
     ||| |  |||||||||||||||| ||||||||    
T  42194758 atcaatgtttatattttagaaaacatcatctca 42194790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 5273456 - 5273326
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| ||||  ||| |||||  |||||| ||||||||||   | ||||| ||||||||   | |||||     
T  5273456 gggagcttctacggtacacctcataaattgaggtgtaccgagact-ctgcttcataaatttataaattaatgattattttttgaaataagttgttattta 5273358  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  5273357 tcattatttatattttagaaaacaccatctca 5273326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 9008037 - 9008168
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||  | | |||| | ||| ||||||| |||||||||| || |  ||||||  ||||||||||  | |||||||||||||||||| |||||     
T  9008037 gggaacttctaaagcacacctaacaaaatgaggtgtaccggtactcttgtttcataaattgataaattaacgattattttatgaaataaaaagttattta 9008136  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  |||||||||||||||| ||||||||    
T  9008137 tcaatgtttatattttagaaaacatcatctca 9008168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 18844236 - 18844287
Alignment:
Q  165 ttttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  18844236 ttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcat 18844287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 27100888 - 27100939
Alignment:
Q  165 ttttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  27100888 ttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcat 27100939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 36569673 - 36569791
Alignment:
Q  101 ggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattata 200  Q
    |||| |||||| ||||||||||| |||| || || |||| ||||||| ||||||||||   ||||||||| ||||||   | |||||||||||| |||||    
T  36569673 ggtacacctcacaaattgaggtgtaccgatattc-tgctttataaatttataaattaatgatcattttataaaataagttgttatttgtcattatttata 36569771  T
Q  201 ttttagaaaacttcatctca 220  Q
    |||||||||||  |||||||    
T  36569772 ttttagaaaacaccatctca 36569791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 2879936 - 2880061
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| |||||||||||||||||| |||| |||| ||| |  |||||| ||||| ||||   ||||||| ||||||||   | ||||| |||||    
T  2879936 cttctacggtacacctcataaattgaggtgtaccgatact-ctgtttcataaatttataagttaatgatcattttttgaaataagttgttatttatcatt 2880034  T
Q  194 aattatattttagaaaacttcatctca 220  Q
    | ||||||||||||||||  |||||||    
T  2880035 atttatattttagaaaacaccatctca 2880061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 12107490 - 12107604
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| | |||||||||||||||| |||||||||||| ||  | |||| ||||| |||||  | ||||||||| ||||| || ||||| ||  ||    
T  12107490 ttctacggtacatctcataaattgaggtgtaccggtactcctacttcaaaaatttataacttaacggttattttatgagataaagagttatttatcgata 12107589  T
Q  195 attatattttagaaa 209  Q
     ||||||||||||||    
T  12107590 tttatattttagaaa 12107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 17642479 - 17642358
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctattt 187  Q
    |||||||||||||||| ||| |  ||||| ||||| |||||||||| | ||  | |||| |||||||||||  ||||||| |||||||||||||||||||    
T  17642479 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctattt 17642381  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   || |||||||||||||||    
T  17642380 gttgatatttatattttagaaaa 17642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 42164924 - 42165034
Alignment:
Q  106 acctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||||||||||||||||| |||| ||||| | || || |||| ||||| |||||  | ||||||||||||||| |  ||||| ||| || ||||||||||    
T  42164924 acctcataaattgaggtgtaccgatactcatactttaaaaatttataatttaacgattattttatgaaataaagaattatttatcaatatttatatttta 42165023  T
Q  206 gaaaacttcat 216  Q
    |||||| ||||    
T  42165024 gaaaacatcat 42165034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 463838 - 463962
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||| ||||||| || ||||||||||||||| | |||||||| |  || |||||  || ||||||||   |||||||| |||||||||| |||||||||    
T  463838 aacttttacggtacacttcataaattgaggtgtatcggtactcttattccataaaattacaaattaacgaccattttataaaataaaaagttatttgtca 463937  T
Q  192 ttaattatattttagaaaacttcat 216  Q
     |  | |||||||||||||| ||||    
T  463938 atgttcatattttagaaaacatcat 463962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 2261421 - 2261303
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctat 185  Q
    |||||||||||| |||| || ||| ||| ||||||| |||||||||||||||  |||| | | |||||||||  |||||||  ||| |||||| ||||||    
T  2261421 ggggaacttctatggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttgtaaattaacgatcattttttatgtaataaatagctat 2261323  T
Q  186 ttgtcattaattatatttta 205  Q
    |||||| || ||||||||||    
T  2261322 ttgtcaatatttatatttta 2261303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 3053146 - 3053078
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||||||| ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  3053146 tataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 3053078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 38764738 - 38764854
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||| | ||||||||||| | |||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  38764738 gggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 38764837  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  38764838 tcaatatttatatttta 38764854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 29039690 - 29039741
Alignment:
Q  165 ttttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  29039690 ttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 29039741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 29454143 - 29454260
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| | ||||| |||||||||||||||  |||| | |||||||||||  |||  ||||||| |||||| | |||||    
T  29454143 gggaacttctacggtacac-tcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatt 29454241  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  29454242 tgtcaatatttatatttta 29454260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 32887666 - 32887769
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct-gctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||| |||  ||||||  ||||||| |   | |||||| ||| |||| ||||||||    
T  32887666 gggaacttctacggtacatctcataaattgaggtgtaccggtactccttgcttcataaattgataaatttatgattattttaggaagtaaagagctattt 32887765  T
Q  188 gtca 191  Q
    ||||    
T  32887766 gtca 32887769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 39722358 - 39722239
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| |||||||||||||||||| ||  |||||| ||||  ||||||  |||||||| |  ||||| || ||| ||||||| ||||| |||    
T  39722358 aacttctacggtacacctcataaattgaggtgtactagtactcttgcttaataaattgataaattatcgatcattctaggaagtaaaaagttatttatca 39722259  T
Q  192 ttaattatattttagaaaac 211  Q
      | ||||||| ||||||||    
T  39722258 aaatttatattgtagaaaac 39722239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 41674891 - 41674769
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctct-ataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||| ||||||||||| | |||| ||||| ||||| | || ||||| |||| | |||||| ||||||||||   ||||||||||||||||   | |||||    
T  41674891 gggagcttctacggtacatctcacaaattaaggtgtatcgatactc-tgcttttataaatttataaattaaggatcattttatgaaataagttgttattt 41674793  T
Q  188 gtcattaattatattttagaaaac 211  Q
    ||||||| ||||||||||||||||    
T  41674792 gtcattatttatattttagaaaac 41674769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 17792610 - 17792509
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctattt 187  Q
    ||||||||||| |||| || ||||||||| ||||| | |||||||||||||   ||||| |||| ||||||| || ||||||||||||||| || |||||    
T  17792610 gggaacttctatggtacac-tcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttattt 17792512  T
Q  188 gtc 190  Q
    |||    
T  17792511 gtc 17792509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 1426382 - 1426455
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  1426382 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 1426455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 12266126 - 12266199
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  12266126 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 12266199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 36835694 - 36835621
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  36835694 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 36835621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 5215322 - 5215450
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| |||||||| || |||| || ||||  |  |||||| |||||||||||  | ||||||| ||||||   | ||||||    
T  5215322 gggaacttctacggtacacctcacaaattgagatgtaccgatattcctatttcataaatttataaattaacgattattttataaaataagttgttatttg 5215421  T
Q  189 tcattaattatattttagaaaacttcatc 217  Q
    ||  ||  ||||||||||||||| |||||    
T  5215422 tcgatatctatattttagaaaacatcatc 5215450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 36274581 - 36274685
Alignment:
Q  107 cctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    ||||||||||||||||| || ||||||| ||||   ||||| ||||||||||| ||  ||||||||||||||| || |||| |||   | ||||||||||    
T  36274581 cctcataaattgaggtgtactggtactcttgcttcctaaatatataaattaacgatcaattttatgaaataaatagttattcgtcgacatttatatttta 36274680  T
Q  206 gaaaa 210  Q
    |||||    
T  36274681 gaaaa 36274685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 2273412 - 2273294
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctatttgtc 190  Q
    ||||||||||||| ||||   ||||| ||||| |||||||||| | ||  | |||| |||||||||||  ||||||| |||||||||||||||||||||     
T  2273412 aacttctacggtacacctgc-aaattaaggtgtaccggtactcttacttcaaaaatttataaattaactgtcatttttatgaaataaaaagctatttgtt 2273314  T
Q  191 attaattatattttagaaaa 210  Q
      || || ||||||||||||    
T  2273313 gatatttgtattttagaaaa 2273294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 7223809 - 7223762
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  7223809 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 7223762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 11360169 - 11360299
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| |||||| |||| |||| | ||||| ||||| |||| || || ||||  |||||| ||||||||||   ||||||||| ||||||   | ||||||    
T  11360169 gggagcttctaaggtacacctaacaaattaaggtgtaccgatattc-tgcttcataaatttataaattaatgatcattttataaaataagttgttatttg 11360267  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  11360268 tcattatttatattttagaaaacaccatctca 11360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 14913925 - 14913972
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  14913925 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 14913972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 21835756 - 21835709
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  21835756 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 21835709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 23870268 - 23870315
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    |||||||||||||||| |||||| |||||| |||| ||||||||||||    
T  23870268 gggaacttctacggtacacctcacaaattggggtgtaccggtactcct 23870315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 24377686 - 24377587
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||| |||||||||| ||||  |||||| |||||| || || || ||||||||||||||| || ||||| ||   | |||||||||||||||    
T  24377686 taaattgaggtgtaccggtactcttgcttcataaatttataaactagcaatcaattttatgaaataaatagttatttatcggcatttatattttagaaaa 24377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 28896984 - 28897031
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  28896984 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 28897031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 40154813 - 40154707
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaact 212  Q
    ||||||||| | |||| ||||| ||||  |||||| ||||||||||   ||||||||||||| ||   | |||||||||||| ||||||||||||||||     
T  40154813 aaattgaggcgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaagaagttgttatttgtcattatttatattttagaaaaca 40154715  T
Q  213 tcatctca 220  Q
     |||||||    
T  40154714 ccatctca 40154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 45393527 - 45393574
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  45393527 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 45393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 45401474 - 45401427
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  45401474 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 45401427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 36672010 - 36672099
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaa 178  Q
    ||||||||||| |||| || || |||||||||||| |||||||||| ||||  |||||| |||||| |||| ||  |||||||||||||||    
T  36672010 gggaacttctatggtacac-tcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaactatcaattttatgaaataaa 36672099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 38971790 - 38971748
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  38971790 atgaaataaaaaggtatttgtcaatatttatattttagaaaac 38971748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 39002888 - 39002846
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  39002888 atgaaataaaaaggtatttgtcaatatttatattttagaaaac 39002846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 27172299 - 27172219
Alignment:
Q  111 ataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtc 190  Q
    ||||||| ||||| | |||||||||||||   ||||| |||| ||||||| ||| |||||||||||||| || ||||||||    
T  27172299 ataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtc 27172219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 31158960 - 31158861
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || ||  ||||||||||| | | |||||| ||||   ||||| ||||||||||| ||| ||||||||||||||| || |||||    
T  31158960 gggaacttctacggtacac-tcgcaaattgaggtgtatcagtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttattt 31158862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 40776655 - 40776754
Alignment:
Q  108 ctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||| ||| |||| || |||| ||||||||||  |||| | |||||||||||  |||||||  ||| |||||| |||||||||||| || ||||||||||    
T  40776655 ctcacaaagtgagatgtaccgatactcctgcttcataattttataaattaacgatcattttttatggaataaatagctatttgtcaatatttatatttta 40776754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 27800033 - 27800155
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| |||||||||||||||||| ||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||| |||| |    
T  27800033 cttctacggtacacctcataaattgaggtgtaccggtactctcgctctataaatttataaattaaagatcattttatgaaataaaaagctattagtcaat 27800132  T
Q  194 aattatattttagaaaacttcat 216  Q
    | |||||||||||||||| ||||    
T  27800133 atttatattttagaaaacatcat 27800155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 43542183 - 43542060
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| |||||||||||||||||||| || ||||| || || |||||| |||||||||||   |||||||||||||||||||||||||| ||    
T  43542183 aacttctacggtacacctcataaattgaggtgcatcgatactcttgttccataaat-tataaattaacgaccattttatgaaataaaaagctatttgcca 43542085  T
Q  192 ttaattatattttagaaaacttcat 216  Q
     || |||||||||| ||||| ||||    
T  43542084 atatttatattttaaaaaacatcat 43542060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 31311749 - 31311623
Alignment:
Q  90 ggaacttctacggtaaacctcataaa-ttgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||| ||||||| |||||| ||| ||||||||||||||||||| ||||| |||||| |||||||||||  | |||||||||||||||||||||||||    
T  31311749 ggaacttttacggtacacctcacaaaattgaggtgcaccggtactcttgctccataaatttataaattaacgattattttatgaaataaaaagctatttg 31311650  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || |||| ||||| ||||| ||||    
T  31311649 tcaatatttat-ttttaaaaaacatcat 31311623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 40856544 - 40856665
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||| ||||||||||| |||| |||||  ||||||||||| ||||||||||   | ||||||||||||||||||||||| || | ||    
T  40856544 ttctacggtacacctcacaaattgaggtgtaccgatactctcgctctataaatttataaattaaggattattttatgaaataaaaagctattagttaata 40856643  T
Q  195 attatattttagaaaacttcat 216  Q
     |||||||||||||||| ||||    
T  40856644 tttatattttagaaaacatcat 40856665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 38882818 - 38882949
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||| | ||| ||||||| |||||||||| |||| |||||||  ||||||||||| | |||||||||||| |||| | ||||     
T  38882818 gggaacttctacggtacacctaacaaaatgaggtgtaccggtactcttgctttataaattgataaattaacaattattttatgaaattaaaatccattta 38882917  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  |||||||||||||||| ||||||||    
T  38882918 tcaatgtttatattttagaaaacatcatctca 38882949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 42584168 - 42584037
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||| ||| |||| ||||||||||  |||||| ||||||||||   |||||||||||| |||   | ||||||    
T  42584168 gggaacttctacggtacacctcacaaattgatgtgtaccgatactcctgcttcataaatttataaattaatgatcattttatgaattaagttgttatttg 42584069  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| || |||||||||||||||| ||||||||    
T  42584068 tcaatatttatattttagaaaacatcatctca 42584037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 2932576 - 2932707
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| |||||||||||||||| | ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  2932576 gggagcttctacggtaaaccttacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 2932674  T
Q  189 tcattaattatattttagaaaacttcatctcac 221  Q
    |||||| ||||||||||||||||  ||||||||    
T  2932675 tcattatttatattttagaaaacaccatctcac 2932707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 45442451 - 45442328
Alignment:
Q  96 tctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaa 195  Q
    ||||||||| |||||||||||||||||| |||| || || |||| ||||||| |||||||||| | ||||||||||||||||   | ||||||| ||||     
T  45442451 tctacggtacacctcataaattgaggtgtaccgatattc-tgctttataaatttataaattaataatcattttatgaaataagttgttatttgttattat 45442353  T
Q  196 ttatattttagaaaacttcatctca 220  Q
    ||||||||||||||||  |||||||    
T  45442352 ttatattttagaaaacaccatctca 45442328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 2089268 - 2089138
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaa-cattcattttatgaaataaaaagctatttg 188  Q
    ||||||||||||||| |||| ||||| ||||||| |||||||||| |||| |||||||  |||||||||  |||| |||||| ||||||||||||||||     
T  2089268 ggaacttctacggtacacctaataaaatgaggtgtaccggtactcttgctttataaattgataaattaatgattc-ttttataaaataaaaagctattta 2089170  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    | | |  |||||||||||||||| ||||||||    
T  2089169 tgaatgtttatattttagaaaacatcatctca 2089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 45701031 - 45701161
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||| ||||||||   | |||||     
T  45701031 gggagcttctacggtacacctcataaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttttgaaataagttgttattta 45701129  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||||||||| ||||||||    
T  45701130 tcattatttatattttagaaaacatcatctca 45701161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 22639367 - 22639496
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||  ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  22639367 gggagcttctacggtacacctcacaaattgaggtgtaccgatact--tgcttcataaatttataaattaattatcattttatgaaataagttgttatttg 22639464  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  22639465 tcattatttatattttagaaaacaccatctca 22639496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 24204614 - 24204746
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatg-aaataaaaagctattt 187  Q
    ||||||||||||| || |||| ||||| |||| || |||||||||| ||||  ||||||  ||||||||||  | |||||||| ||||||||||||||||    
T  24204614 gggaacttctacgatacacctaataaaatgagatgtaccggtactcttgcttcataaattgataaattaacgattattttatgaaaataaaaagctattt 24204713  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
     | |||  |||||||||||||||| ||||||||    
T  24204714 ataattgtttatattttagaaaacatcatctca 24204746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 11640700 - 11640570
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||  ||||||||||| |||| |||||| ||| ||||||| ||||||||||   | ||||||||||||||   | ||||||    
T  11640700 gggagcttctacggtacacctcgcaaattgaggtgtaccgatactcc-gctttataaatttataaattaatgattattttatgaaataagttgttatttg 11640602  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  11640601 tcattatttatattttagaaaacaccatctca 11640570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 22904516 - 22904622
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaact 212  Q
    ||||||||||| |||| ||||| ||||  |||||| ||||||||||   |||||||||||||||||  | |||||||||||| ||||||||||||||||     
T  22904516 aaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataaattgttatttgtcattatttatattttagaaaaca 22904614  T
Q  213 tcatctca 220  Q
    ||||||||    
T  22904615 tcatctca 22904622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 31743708 - 31743581
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| |||||| |||| |||||||||||||||  | |||| ||||| |||||  | ||||||||||||||| || |||||     
T  31743708 gggaacttctacggtacacctcacaaattgtggtgtaccggtactcctgcttcaaaaatttataatttaacgattattttatgaaataaagagttattta 31743609  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    | | || |||||||||| ||||| ||||    
T  31743608 taaatatttatattttataaaacatcat 31743581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 13806761 - 13806640
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| || ||||||||||||||| ||| |||||||| ||  | |||| ||||| |||||  | ||||||||||||||| || ||||| ||| ||    
T  13806761 ttctacggtacacttcataaattgaggtgtaccagtactcctacttcaaaaatttataatttaacgattattttatgaaataaagagttatttatcaata 13806662  T
Q  195 attatattttagaaaacttcat 216  Q
     |||||||||||||||| ||||    
T  13806661 tttatattttagaaaacatcat 13806640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 24149163 - 24149043
Alignment:
Q  99 acggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaatta 198  Q
    |||||| | |||||||||||||||| |||| ||||| |||| ||||||| ||||||||||   | ||||||||||||||   | |||||||||||| |||    
T  24149163 acggtacatctcataaattgaggtgtaccgatactc-tgctttataaatttataaattaatgattattttatgaaataagttgttatttgtcattattta 24149065  T
Q  199 tattttagaaaacttcatctca 220  Q
    ||||||||||||| | ||||||    
T  24149064 tattttagaaaacattatctca 24149043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 5215431 - 5215315
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| || ||| ||||||||||| ||||||||||||||| || | || || || |||||  | ||||||||||||||| || |||||     
T  5215431 gggaacttctacggtacacatcacaaattgaggtgtaccggtactcctgctttaaatatttacaatttaacgattattttatgaaataaagagttattta 5215332  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  5215331 tcaatatttatatttta 5215315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 21919688 - 21919804
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  21919688 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 21919787  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  21919788 tcaatatttatatttta 21919804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 1343423 - 1343300
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| ||| ||||||||||| || |||||||||||| ||| | |||| ||||| ||||   | ||||||||||||||| || ||||| ||      
T  1343423 acttctacggtacaccacataaattgagatgtaccggtactcctactccaaaaatttataatttaaggattattttatgaaataaagagttatttatcga 1343324  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  1343323 tatttatattttagaaaacatcat 1343300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 3228626 - 3228520
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaact 212  Q
    ||||||||||| |||| ||||| ||||  |||||| ||||||||||   | |||||||||||||||  | |||||||||||| ||||||||||||||||     
T  3228626 aaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgattattttatgaaataaatggttatttgtcattatttatattttagaaaaca 3228528  T
Q  213 tcatctca 220  Q
    ||||||||    
T  3228527 tcatctca 3228520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 19346018 - 19345888
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| |||| |||| |||||  |||||| ||||||||||   ||||||| ||||||||   | |||||     
T  19346018 gggagcttctacggtacacctcataaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatcattttttgaaataagttgttattta 19345920  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    | |||| ||||||||||||||||  |||||||    
T  19345919 ttattatttatattttagaaaacaccatctca 19345888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 27897224 - 27897354
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||  ||||||||||| |||| |||||| ||| ||||||| ||||||||||   |||||||||||||||||  | ||||||    
T  27897224 gggagcttctacggtacacctcgcaaattgaggtgtaccgatactcc-gctttataaatttataaattaatgatcattttatgaaataaattgttatttg 27897322  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |  ||| |||||||| |||||||  |||||||    
T  27897323 ttgttatttatatttcagaaaacaccatctca 27897354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 8577927 - 8578044
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    |||||||| |||| |||||||||||||||||| |||  ||||| | ||  |||||| |||||||||||  ||||||||| ||||||| || |||||||||    
T  8577927 aacttctatggtacacctcataaattgaggtgtaccaatactcttacttcataaatttataaattaacgatcattttataaaataaataggtatttgtca 8578026  T
Q  192 ttaattatattttagaaaa 210  Q
     | ||||||||||| ||||    
T  8578027 at-attatattttaaaaaa 8578044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 29688924 - 29688974
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgct 139  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  29688924 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgct 29688974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 34363614 - 34363747
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagc--tatt 186  Q
    |||||||||||||||| |||| | ||| ||| ||| ||| |||||| ||||  ||||||  ||||||||||  | |||||||||||||||||||  ||||    
T  34363614 gggaacttctacggtacacctaacaaaatgacgtgtaccagtactcttgcttcataaattgataaattaacgattattttatgaaataaaaagctatatt 34363713  T
Q  187 tgtcattaattatattttagaaaacttcatctca 220  Q
    | ||| |  |||||||||||||||| ||||||||    
T  34363714 tatcaatgtttatattttagaaaacatcatctca 34363747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 49079661 - 49079540
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| ||||||||||| |||||  ||||||||||| |||| ||||| |||| ||||||| ||||| |||| | |||||||| |||||||   | |||||    
T  49079661 ggggagcttctacggtacacctcgcaaattgaggtgtaccgatactc-tgctttataaatttataatttaataatcattttacgaaataagttgttattt 49079563  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||||||| |||||||| ||||||    
T  49079562 gtcattatttatatttcagaaaa 49079540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 30936094 - 30936215
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctattt 187  Q
    |||||||||||||||| ||| |  ||||| ||||| |||||||||| | ||  | |||| |||||||||||  ||| |||||||||||||||||||||||    
T  30936094 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctattt 30936192  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   || |||||||||||||||    
T  30936193 gttgatatttatattttagaaaa 30936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 35925099 - 35925029
Alignment:
Q  150 ataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctca 220  Q
    ||||||||||  | |||||||||||||||||||||||| ||| |  |||||||||||||||| ||||||||    
T  35925099 ataaattaacgattattttatgaaataaaaagctatttatcaatgtttatattttagaaaacatcatctca 35925029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 41769289 - 41769401
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    |||||||||| || |||||||||||||||||| || ||||||||||||  | || | ||||| |||||  | |||||||||||| ||||| ||||| |||    
T  41769289 aacttctacgatacacctcataaattgaggtgtactggtactcctgcttcaaaattttataatttaacgattattttatgaaat-aaaagttatttttca 41769387  T
Q  192 ttaattatatttta 205  Q
     || ||||||||||    
T  41769388 atatttatatttta 41769401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 23182390 - 23182506
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||| ||||| || ||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  23182390 gggaacttctacggtacacctcacaaattaaggtgtactggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 23182489  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  23182490 tcaatatttatatttta 23182506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 48460251 - 48460367
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||||||| |||| |||||| ||||||||||  |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  48460251 gggaacttctatggtacacctcacaaattgaggtataccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 48460350  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  48460351 tcaatatttatatttta 48460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 27427140 - 27427258
Alignment:
Q  101 ggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattata 200  Q
    |||| |||||||||||||||||  |||| ||||| || | ||||||| ||||||||||   | ||||||||||||||   | |||||||||||| |||||    
T  27427140 ggtacacctcataaattgaggtctaccgatactc-tgatttataaatttataaattaatgataattttatgaaataagttgttatttgtcattatttata 27427238  T
Q  201 ttttagaaaacttcatctca 220  Q
    ||||| |||||  |||||||    
T  27427239 ttttaaaaaacaccatctca 27427258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 32823512 - 32823402
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgt 189  Q
    ||||||||||||||| |||  | ||||||||||| |||| ||||||||||  | |||| ||||| |||||  | |||||||||||||||||| ||||| |    
T  32823512 ggaacttctacggtacaccaaacaaattgaggtgtaccgatactcctgcttcaaaaatttataatttaacgat-attttatgaaataaaaagttatttat 32823414  T
Q  190 cattaattatat 201  Q
    || || ||||||    
T  32823413 caatatttatat 32823402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 43631055 - 43631176
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctattt 187  Q
    ||||||||||| |||| || || || ||||||||| |||||||||| ||||  |||||| |||||| ||||  ||| |||||||||||||| || |||||    
T  43631055 gggaacttctatggtacac-tcgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttattt 43631153  T
Q  188 gtcattaattatattttagaaaa 210  Q
    |||   | |||||||||||||||    
T  43631154 gtcgacatttatattttagaaaa 43631176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 45857498 - 45857596
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||| ||||| |||||||||| | ||  | |||| ||||||||||| |||  |||||||||||||||||||||||||   || |||||||||||||||    
T  45857498 aaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattacttttatgaaataaaaagctatttgttgatatttatattttagaaaa 45857596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 25867257 - 25867184
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  25867257 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 25867184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 39444317 - 39444244
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  39444317 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 39444244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 40947028 - 40947101
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  40947028 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 40947101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 16086971 - 16087067
Alignment:
Q  115 attgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||| |||||||||| ||||  |||||| |||||| ||||  ||| |||||||||||||| || ||||||||   | |||||||||||||||    
T  16086971 attgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcgacatttatattttagaaaa 16087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 32186478 - 32186546
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || ||||||||||||||||    
T  32186478 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaac 32186546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 41715194 - 41715262
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || ||||||||||||||||    
T  41715194 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaac 41715262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 1282511 - 1282464
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  1282511 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 1282464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 8648092 - 8648163
Alignment:
Q  149 tataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctca 220  Q
    ||||||||||   |||||||||||||||||    |||||||||||| ||||||||||||||||  |||||||    
T  8648092 tataaattaatgatcattttatgaaataaatttttatttgtcattatttatattttagaaaacaccatctca 8648163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 9923396 - 9923349
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  9923396 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 9923349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 24505449 - 24505402
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  24505449 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 24505402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 42039628 - 42039581
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  42039628 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 42039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 45196885 - 45196932
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  45196885 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 45196932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 46911603 - 46911669
Alignment:
Q  149 tataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||   ||||||||| ||||||| |||||||||||| | ||||||||||||||||| ||||    
T  46911603 tataaattaatgatcattttataaaataaatagctatttgtcaat-attatattttagaaaacatcat 46911669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 47220281 - 47220234
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  47220281 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 47220234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 15591772 - 15591690
Alignment:
Q  109 tcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtc 190  Q
    ||||||||| ||||| ||||||||| |||||   ||||| |||  ||||||| ||| ||||||||||||||||| ||||||||    
T  15591772 tcataaattaaggtgtaccggtacttctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgtc 15591690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 2038150 - 2038223
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||| ||| || |||||||||||||||| ||||    
T  2038150 aaatttataaattaacgatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcat 2038223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 8159639 - 8159696
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaat 147  Q
    ||||||||||||||| |||||||||||||| |||  |||||||| ||| | |||||||    
T  8159639 ggaacttctacggtacacctcataaattgaagtgtgccggtacttctgttttataaat 8159696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 15091020 - 15090947
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||| | || |||||||||||||||| ||||    
T  15091020 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcat 15090947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 38859637 - 38859552
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaa 178  Q
    |||||||||||| |||| ||||||||||||| || ||||||||| ||  | |||| ||||| || ||  | |||||||||||||||    
T  38859637 acttctacggtacaccttataaattgaggtgtactggtactcctacttcaaaaatttataattttacgattattttatgaaataaa 38859552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 7574174 - 7574242
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||||||| ||||||||||||  ||||||||| || |||||||||| ||||| ||||    
T  7574174 tataaattaacgatcatttttatgaaataaaaatttatttgtcaatatttatattttaaaaaacgtcat 7574242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 23406653 - 23406775
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctattt 187  Q
    ||||||| ||||||| || ||| ||| ||||||| |||||||||||||||  |||| | |||| ||||||  |||  ||||||| |||||| | ||||||    
T  23406653 ggaacttatacggtacac-tcacaaaatgaggtgtaccggtactcctgcttcataattttatatattaacgatcattttttatgcaataaataactattt 23406751  T
Q  188 gtcattaattatattttagaaaac 211  Q
     ||| || |||||||||| |||||    
T  23406752 ttcaatatttatattttataaaac 23406775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 40379044 - 40379092
Alignment:
Q  162 tcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||| |||||||||| ||||| ||| || |||||||||||||||    
T  40379044 tcattttataaaataaaaagttatttatcaatatttatattttagaaaa 40379092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 32570774 - 32570648
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| | ||  |||||| |||||||||||  ||||||||||||||||| || ||||||    
T  32570774 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatcattttatgaaataaataggtatttg 32570675  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| | ||||||||||||||||| ||||    
T  32570674 tcaat-attatattttagaaaacatcat 32570648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 27950258 - 27950376
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||  | ||||||||| ||||||||||   |||||||||||||||||||| |||| |    
T  27950258 gggaacttctacggtacacctcacaaattgaggtgtaccggtactctcgttctataaatttataaattaaggatcattttatgaaataaaaagttattag 27950357  T
Q  189 tcattaattatattttaga 207  Q
    ||| || ||||||||||||    
T  27950358 tcaatatttatattttaga 27950376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 30168101 - 30168229
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| |||||| ||||||| ||| |||| ||||||||||  ||| || |||||||||||| ||||||||||||||||  || |||||||||    
T  30168101 aacttctacggtacacctcacaaattgaagtgtaccgatactcctgctacatatatttataaattaacaatcattttatgaaataagtagttatttgtca 30168200  T
Q  192 ttaattatattttagaaaacttcatctca 220  Q
     |  ||||||||||||||||  |||||||    
T  30168201 atgtttatattttagaaaacaccatctca 30168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 52323965 - 52324097
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||| ||||| |||||| ||||||||||| |||| ||||||||||  |||||| |||||||| ||| ||||||||||||||||  || |||||    
T  52323965 ggggaacttctgcggtacacctcacaaattgaggtgtaccgatactcctgctacataaatttataaatttacaatcattttatgaaataagtagttattt 52324064  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
    |||| |  |||||||||| |||||  |||||||    
T  52324065 gtcaatctttatattttaaaaaacaccatctca 52324097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 39412169 - 39412290
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||| |||||||||| |||||| ||||| ||||| |||| ||||||||||  |||||| |||||||||||| ||||||||| ||||||| || |||||     
T  39412169 gggaatttctacggtacacctcacaaattaaggtgtaccgatactcctgctacataaatttataaattaacaatcattttataaaataaatagttattta 39412268  T
Q  189 tcattaattatattttagaaaa 210  Q
    ||| |  |||||||||||||||    
T  39412269 tcaatgtttatattttagaaaa 39412290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 6806986 - 6807117
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| ||||   ||||||||||| || | |||||||| |  |||||| |||||||||||| ||||||||||||||||  || ||||||    
T  6806986 gggaacttctacggtacaccttgcaaattgaggtgtacggatactcctgatacataaatttataaattaacaatcattttatgaaataagtagttatttg 6807085  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  ||||||||||||||||  |||||||    
T  6807086 tcaatgtttatattttagaaaacaccatctca 6807117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 24566367 - 24566498
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||| | ||| ||||||| |||||||||| || | |||||||  ||||||||||| | |||||||||||| |||| | ||||     
T  24566367 gggaacttctacggtacacctaacaaaatgaggtgtaccggtactcttgttttataaattgataaattaacaattattttatgaaattaaaatccattta 24566466  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  |||||||||||||||| ||||||||    
T  24566467 tcaatgtttatattttagaaaacatcatctca 24566498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 25607694 - 25607816
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| |||||| ||||||||||| ||||||||||   ||  |||||| |||||||||||  | ||||||||||||||| || |||||||||     
T  25607694 acttctacggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaacgattattttatgaaataaataggtatttgtcaa 25607793  T
Q  193 taattatattttagaaaacttcat 216  Q
    | ||||||||||||||||| ||||    
T  25607794 t-attatattttagaaaacatcat 25607816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 337130 - 337222
Alignment:
Q  117 tgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaa 209  Q
    ||||||| |||||||||| ||||| |||||  | ||||||||||  |||||||| |||||||||||||||||||| || ||||||||||||||    
T  337130 tgaggtgtaccggtactcttgctccataaaattgtaaattaacaaccattttataaaataaaaagctatttgtcaatatttatattttagaaa 337222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 9579663 - 9579791
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||| |||||||||||| ||||||||||||||| || || ||||||||| ||  | |||| ||||| |||||| | ||||||||||||||| || ||||     
T  9579663 gggggacttctacggtacacctcataaattgagttgtactggtactcctacttcaaaaatttataatttaacaattattttatgaaataaagagttattc 9579762  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
     ||| || |||||||||||||||| ||||    
T  9579763 atcaatatttatattttagaaaacatcat 9579791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 9585358 - 9585486
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||| |||||||||||| ||||||||||||||| || || ||||||||| ||  | |||| ||||| |||||| | ||||||||||||||| || ||||     
T  9585358 gggggacttctacggtacacctcataaattgagttgtactggtactcctacttcaaaaatttataatttaacaattattttatgaaataaagagttattc 9585457  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
     ||| || |||||||||||||||| ||||    
T  9585458 atcaatatttatattttagaaaacatcat 9585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 48207484 - 48207354
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||| ||||   | ||||||    
T  48207484 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgagataagttgttatttg 48207386  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  48207385 tcattatttatattttagaaaacaccatctca 48207354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 54178826 - 54178696
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||| ||||||   | ||||||    
T  54178826 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttattaaataagttgttatttg 54178728  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  54178727 tcattatttatattttagaaaacaccatctca 54178696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 25684098 - 25684223
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| ||||||||||||||| || | || ||||| ||||  |||||| ||||||||||   ||||||||||||||||     |||||||||||    
T  25684098 cttctacggtacacctcataaattgagatgtatcgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttattatttgtcatt 25684196  T
Q  194 aattatattttagaaaacttcatctca 220  Q
    | |||||||||||||||| ||||||||    
T  25684197 atttatattttagaaaacatcatctca 25684223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 595296 - 595412
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||||| ||  | |||| ||||| |||||   |||||||| |||||||||| ||||      
T  595296 gggaatttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaaaatttataatttaacggccattttataaaataaaaagttattca 595395  T
Q  189 tcattaattatatttta 205  Q
    ||| |||||||||||||    
T  595396 tcaataattatatttta 595412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 12756408 - 12756293
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgt 189  Q
    ||||||||||||||| |||||| ||||||||||| ||||||| |||||||  | | || || || |||||| | ||||||||||||||| || ||||| |    
T  12756408 ggaacttctacggtacacctcacaaattgaggtgtaccggtattcctgcttcaaatatttacaatttaacaattattttatgaaataaagagttatttat 12756309  T
Q  190 cattaattatatttta 205  Q
    || || ||||||||||    
T  12756308 caatatttatatttta 12756293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 15060961 - 15060834
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||||||  | ||||  |||| |||| | ||||||||| ||||||| || |||||     
T  15060961 gggaacttctacggtacatctcataaattgaggtgcatcggtactcctgcttcaaaaattgataatttaaaaatcattttataaaataaagagttattta 15060862  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || || |||| || ||||| ||||    
T  15060861 tcaatatttgtattatataaaacatcat 15060834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 21424548 - 21424417
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| | || | ||| |||| || |||||||||| | ||  ||||||  ||||||||||  | |||||||||||||||||| |||||     
T  21424548 gggaacttctacggtacatctaacaaaatgagatgtaccggtactcttacttcataaattgataaattaacgattattttatgaaataaaaagttattta 21424449  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| |  |||||||||||||||| ||||||||    
T  21424448 tcaatgtttatattttagaaaacatcatctca 21424417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 34584182 - 34584309
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||| |||  | |||| ||||| |||||  | ||||||||||||||| || |||||     
T  34584182 gggaacttctacggtacacctcacaaattgaggtgtaccgatactccagcttcaaaaatttataatttaacgattattttatgaaataaagagttattta 34584281  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    | | || |||||||||| ||||| ||||    
T  34584282 taaatatttatattttataaaacatcat 34584309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 4695714 - 4695616
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| |  | ||||  |||| ||||   ||||||||||||||||| || |||||    
T  4695714 gggaacttctagggtacacctcataaattgaggtgcaccggtactcctgtttcaaaaattgataatttaaagatcattttatgaaataaagagttattt 4695616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 17281779 - 17281904
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| |||||| ||||||||||| |||| | ||| ||||  |||||| ||||||||||   ||||||||||| ||||   | |||||||||||    
T  17281779 cttctacggtacacctcacaaattgaggtgtaccgattctc-tgcttcataaatttataaattaatgatcattttatgagataagttgttatttgtcatt 17281877  T
Q  194 aattatattttagaaaacttcatctca 220  Q
    | ||||||||||||||||  |||||||    
T  17281878 atttatattttagaaaacaccatctca 17281904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 17370281 - 17370406
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| |||||| ||||||||||| |||| | ||| ||||  |||||| ||||||||||   ||||||||||| ||||   | |||||||||||    
T  17370281 cttctacggtacacctcacaaattgaggtgtaccgattctc-tgcttcataaatttataaattaatgatcattttatgagataagttgttatttgtcatt 17370379  T
Q  194 aattatattttagaaaacttcatctca 220  Q
    | ||||||||||||||||  |||||||    
T  17370380 atttatattttagaaaacaccatctca 17370406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 42680653 - 42680731
Alignment:
Q  144 aaatgtataaattaacattca-ttttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctcac 221  Q
    |||| |||||||||||  ||| ||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||    
T  42680653 aaatttataaattaacgatcacttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcac 42680731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 45063290 - 45063368
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||||  | |||||||||||||||||||||||| ||| |  |||||||||||||||| ||||||||    
T  45063290 ataaatttataaattaacgattattttatgaaataaaaagctatttatcaatgtttatattttagaaaacatcatctca 45063368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 5474011 - 5474135
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||| ||| |||||| ||||||| ||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||||||||    
T  5474011 ttctacagtacacctcacaaattgatgtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttgtcatta 5474109  T
Q  195 attatattttagaaaacttcatctca 220  Q
     ||||||||||||||||  |||||||    
T  5474110 tttatattttagaaaacaccatctca 5474135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 4491262 - 4491214
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctg 137  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  4491262 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctg 4491214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 19527130 - 19527014
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  19527130 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 19527031  T
Q  189 tcattaattatatttta 205  Q
    ||  || ||||||||||    
T  19527030 tccatatttatatttta 19527014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 31975956 - 31975840
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||  | ||||||||||||| || | || || || |||||  | ||||||||||||||| || |||||     
T  31975956 gggaacttctacggtagacctcacaaattgaggtctatcggtactcctgctttaaatatttacaatttaacgattattttatgaaataaagagttattta 31975857  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  31975856 tcaatatttatatttta 31975840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 200
Target Start/End: Complemental strand, 22077772 - 22077661
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||||    ||||||| |||||||||||||||  | |||| ||||| |||||  ||||||||||||||||| || |||||     
T  22077772 gggaacttctacggtacacctcattttgtgaggtgtaccggtactcctgcttcaaaaatttataatttaacgatcattttatgaaataaagagttattta 22077673  T
Q  189 tcattaattata 200  Q
    ||| || |||||    
T  22077672 tcaatatttata 22077661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 30060530 - 30060651
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || || |||||||||||| |||| ||||| ||||  |||||| |||||| ||||  ||| |||||||||||||| || |||||    
T  30060530 gggaacttctacggtacac-tcgtaaattgaggtgtaccgatactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttattt 30060628  T
Q  188 gtcattaattatattttagaaaa 210  Q
    |||   | |||||||||||||||    
T  30060629 gtcggcatttatattttagaaaa 30060651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 39103539 - 39103653
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtc 190  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||| ||||||| || ||||| ||    
T  39103539 gaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttattaaataaagagttatttatc 39103638  T
Q  191 attaattatatttta 205  Q
    | || ||||||||||    
T  39103639 aatatttatatttta 39103653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 46663732 - 46663631
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaa-cattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || || |||||||||||| |||||||||| ||||  |||||| ||||||||||  ||  ||||||||||||||| || |||||    
T  46663732 gggaacttctacggtacac-tcgtaaattgaggtgtaccggtactcttgcttcataaatctataaattaatgatcaattttatgaaataaatagttattt 46663634  T
Q  188 gtc 190  Q
    |||    
T  46663633 gtc 46663631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 9858654 - 9858534
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttg 188  Q
    ||||||||||||||| ||||   ||||| ||||| |||||||||| | ||  | |||| ||||||||||| |||  ||||||||||||||||||||||||    
T  9858654 ggaacttctacggtacacctgc-aaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaaaagctatttg 9858556  T
Q  189 tcattaattatattttagaaaa 210  Q
    |   || |||||||||||||||    
T  9858555 ttgatatttatattttagaaaa 9858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 19627977 - 19627872
Alignment:
Q  106 acctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||||||||||||||||| |||||||||  | ||  |||||| ||||| | ||| | |||||||| ||||||  || ||||||||| || ||||||||||    
T  19627977 acctcataaattgaggtgtaccggtacttttacttcataaatttataattgaacgtccattttattaaataattagttatttgtcaatatttatatttta 19627878  T
Q  206 gaaaac 211  Q
    ||||||    
T  19627877 gaaaac 19627872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 36091463 - 36091343
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctatttg 188  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||| | ||  | |||| |||||||||||  ||||||| ||||||||||||||||||||    
T  36091463 ggaacttctacggtacacctg-taaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 36091365  T
Q  189 tcattaattatattttagaaaa 210  Q
    |   || || ||||||||||||    
T  36091364 ttgatatttgtattttagaaaa 36091343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 52257484 - 52257411
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  |||||||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  52257484 aaatatataaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 52257411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 1605590 - 1605718
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtat-aaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| ||||||||| |  ||| ||||| ||||  |||||| ||| |||||||   |||||||| ||| |||| |||| |||    
T  1605590 gggaacttctacggtacacctcacaaattgaggggtgccgatactcttgcttcataaatttataaaattaatgatcattttaggaactaaatagcttttt 1605689  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
    ||   ||||||||||||||||||| ||||    
T  1605690 gttgataattatattttagaaaacatcat 1605718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 53973464 - 53973572
Alignment:
Q  97 ctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaat 196  Q
    |||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||||||||||| || ||||| ||| || |    
T  53973464 ctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttatttatcaatatt 53973563  T
Q  197 tatatttta 205  Q
    |||||||||    
T  53973564 tatatttta 53973572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 408466 - 408348
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtc 190  Q
    ||||||||||||| || || |||||||||||| |||||||||| ||||  |||||| |||||| |||| ||  ||||||| ||||||| || ||||||||    
T  408466 aacttctacggtacac-tcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttattaaataaatagttatttgtc 408368  T
Q  191 attaattatattttagaaaa 210  Q
       | |||||||||||||||    
T  408367 ggaatttatattttagaaaa 408348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 11038046 - 11038144
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctattt 187  Q
    |||||||||||||| |||| ||||||||| ||||| |||| ||||||||||   ||||| |||  ||||||| ||| ||||||||||||||||| |||||    
T  11038046 gggaacttctacggcaaac-tcataaattaaggtgtaccgatactcctgcttcttaaatttatgcattaacaatcaattttatgaaataaaaagttattt 11038144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 28967917 - 28967850
Alignment:
Q  111 ataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaa 178  Q
    ||||||| ||||| ||||||||||||||| | ||||| |||| ||||| | |||||||||||||||||    
T  28967917 ataaattaaggtgtaccggtactcctgctttttaaatttatatattaaaaatcattttatgaaataaa 28967850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 1791854 - 1791947
Alignment:
Q  116 ttgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||| |||| ||||| ||||  |||||| |||||||||| | ||||||| |||||||||  | ||||| |||||| |||||||||||||||    
T  1791854 ttgaggtgtaccgatactc-tgcttcataaatttataaattaataatcattttttgaaataaattgttatttatcattatttatattttagaaaa 1791947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 48262915 - 48262842
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||| |||||||||||  ||||||||||||||||| || ||||||||| | ||||||| ||||||||| ||||    
T  48262915 ataaatttataaattaacgatcattttatgaaataaatagatatttgtcaat-attatatattagaaaacatcat 48262842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 3690919 - 3690790
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaa-ttaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| ||||||||||| | || || |||| ||  |||||| |||||| |||||  | ||||||||||||||   | |||||    
T  3690919 gggaacttctacggtacacctcacaaattgaggtgtatcgatattcctacttcataaatttataaatttaacgattattttatgaaataagttgttattt 3690820  T
Q  188 gtcattaattatattttagaaaacttcatc 217  Q
    |||  ||  ||||||||||||||| |||||    
T  3690819 gtcgatatctatattttagaaaacatcatc 3690790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 6882583 - 6882652
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||||| ||||||||||   ||||||||||||||||   | |||||||||||| ||||||||||||||||    
T  6882583 ataaatttataaattaatgatcattttatgaaataagttgttatttgtcattatttatattttagaaaac 6882652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 27636092 - 27636019
Alignment:
Q  144 aaatgtataaattaacattcattt-tatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| ||||||||||   |||||| |||||||||||||||||||||||  || |||||||||||||||| ||||    
T  27636092 aaatttataaattaatgatcatttatatgaaataaaaagctatttgtccatatttatattttagaaaacatcat 27636019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 32882613 - 32882544
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||||| ||||||||||   ||||||||||||||||   | |||||||||||| ||||||||||||||||    
T  32882613 ataaatttataaattaatgatcattttatgaaataagttgttatttgtcattatttatattttagaaaac 32882544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 210
Target Start/End: Original strand, 33491606 - 33491722
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtcat 192  Q
    ||||||||||| || || |||||||| ||| |||||||||| ||||  |||||| |||||| ||||  ||| |||||||||||||| || ||||||||      
T  33491606 cttctacggtacac-tcgtaaattgaagtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcgg 33491704  T
Q  193 taattatattttagaaaa 210  Q
     | |||||||||||||||    
T  33491705 catttatattttagaaaa 33491722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 38960969 - 38961086
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||  ||| |||||||||||||||||| | || ||||| || || ||||   | |||||||||  |||||| ||||||||||||  ||||| |||     
T  38960969 acttctattgtacacctcataaattgaggtgtatcgatactcttgttccataagattgtaaattaacgatcatttcatgaaataaaaaattatttatcaa 38961068  T
Q  193 taattatattttagaaaa 210  Q
    || |||||||||||||||    
T  38961069 tatttatattttagaaaa 38961086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 46630700 - 46630773
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  46630700 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 46630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 1433809 - 1433908
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgt 189  Q
    ||||||||| |||| || ||||||||| ||||| ||||||| |||||||   ||||| |||  ||||||| ||| ||||||||||||||||| |||||||    
T  1433809 gaacttctatggtacac-tcataaattaaggtgtaccggtattcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgt 1433907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 31908846 - 31908727
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgt 189  Q
    |||||||||||||| ||| |  ||||| ||||| |||||||||| | ||  | |||| |||||||||||  ||| |||||||||||||||||||||||||    
T  31908846 gaacttctacggtacacc-cgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttgt 31908748  T
Q  190 cattaattatattttagaaaa 210  Q
       || |||||||||| ||||    
T  31908747 tgatatttatattttaaaaaa 31908727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 39380426 - 39380526
Alignment:
Q  111 ataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| | |||||||| ||| | |||||  ||||||||||   ||| ||||||||||||||| |||||||| | || |||| ||||| ||||    
T  39380426 ataaattgaggtgtatcggtactcttgcaccataaaattataaattaatgatcaatttatgaaataaaaaactatttgtaaatatttatgttttataaaa 39380525  T
Q  211 c 211  Q
    |    
T  39380526 c 39380526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 43349090 - 43349182
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    ||||||||||| |||||||||||||||  | | || ||||| |||||  | ||||||||||||||| || ||||| ||| || ||||||||||    
T  43349090 aaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgattattttatgaaataaagagttatttatcaatatttatatttta 43349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 48549719 - 48549787
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || ||||||||||||||||    
T  48549719 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaac 48549787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 56303242 - 56303175
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac 159  Q
    ||||||||| |||| || ||||||| ||||||| ||||||||||||||| ||||| | |||||||||||    
T  56303242 gaacttctatggtacac-tcataaagtgaggtgtaccggtactcctgctttataattttataaattaac 56303175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 22789582 - 22789685
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct-gctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| |||||| |||| |||||||||||| |||  ||||||  ||||||| |   | |||||| ||| |||| ||||||||    
T  22789582 gggaacttctacggtacacctcacaaattggggtgtaccggtactccttgcttcataaattgataaatttatgattattttaggaagtaaagagctattt 22789681  T
Q  188 gtca 191  Q
    ||||    
T  22789682 gtca 22789685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 24292304 - 24292257
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  24292304 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 24292257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 36569974 - 36569927
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  36569974 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 36569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 44998736 - 44998689
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  44998736 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 44998689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 46688509 - 46688458
Alignment:
Q  130 tactcctgctctataaatgtataaattaacattcattttatgaaataaaaag 181  Q
    ||||| ||||| |||||| |||||||||||  ||||||||||||||||||||    
T  46688509 tactcttgctcaataaatttataaattaacgatcattttatgaaataaaaag 46688458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 49286688 - 49286735
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    |||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  49286688 gggagcttctacggtacacctcacaaattgaggtgtaccggtactcct 49286735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 55129824 - 55129891
Alignment:
Q  144 aaatgtataaattaacattcattt-tatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||| ||||||||||   |||||| |||||||||||||||||||||||  || |||||||||||||||    
T  55129824 aaatttataaattaatgatcatttatatgaaataaaaagctatttgtccatatttatattttagaaaa 55129891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 5970700 - 5970816
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctattt 187  Q
    ||||||||||||||| || ||| | | |||| || |||||||||| ||||  |||| | |||||||||| | |||||||  ||| |||||| ||||||||    
T  5970700 ggaacttctacggtacac-tcacatagtgagatgtaccggtactcttgcttcataattttataaattaataatcattttttatgtaataaatagctattt 5970798  T
Q  188 gtcattaattatatttta 205  Q
    |||| || ||||||||||    
T  5970799 gtcaatatttatatttta 5970816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 16004609 - 16004655
Alignment:
Q  164 attttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||| ||||||||||||| ||||||||| || |||||||||||||||    
T  16004609 atttaatgaaataaaaaggtatttgtcaatatttatattttagaaaa 16004655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 21515315 - 21515273
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  21515315 atgaaataaaaaggtatttgtcaatatttatattttagaaaac 21515273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 45629435 - 45629393
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  45629435 atgaaataaaaaggtatttgtcaatatttatattttagaaaac 45629393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 50189419 - 50189298
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||| ||| || || |||||||||||| ||| |||||| ||||  |||||| |||||| |||| ||  ||||||||||||||| |  |||||    
T  50189419 gggaacttctacagtacac-tcgtaaattgaggtgtaccagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaataaatattt 50189321  T
Q  188 gtcattaattatattttagaaaa 210  Q
    |||   | |||||||||||||||    
T  50189320 gtcggcatttatattttagaaaa 50189298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 10779072 - 10779113
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  10779072 atgaaataaaaagatatttgtcaatatttatattttagaaaa 10779113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 33612875 - 33612802
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||  ||||||||| || |||||||||||||||| ||||    
T  33612875 aaatttataaattaacgatcactttaatgaaataaaaaagtatttgtcaatatttatattttagaaaacatcat 33612802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 38955123 - 38955164
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  38955123 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 38955164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 42244592 - 42244665
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||| ||||| ||||    
T  42244592 aaatatataaattaacgatcactttaatgaaataaaaagatatttgtcaatatttatattttataaaacatcat 42244665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 43349052 - 43349089
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcac 126  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  43349052 gggaacttctacggtacacctcacaaattgaggtgcac 43349089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 46222073 - 46222114
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  46222073 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 46222114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 56017125 - 56017080
Alignment:
Q  165 ttttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||||||||||||||||| || || ||||||| ||||    
T  56017125 ttttatgaaataaaaagctatttgtcaatatttctattttaaaaaa 56017080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 27990535 - 27990653
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctat 185  Q
    |||||||||||||| || || ||| ||| ||||||| |||||||||||||||   ||| | ||||||| |||  |||  ||||||| | |||| ||||||    
T  27990535 ggggaacttctacgatacac-tcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaatagctat 27990633  T
Q  186 ttgtcattaattatatttta 205  Q
    |||||| || ||||||||||    
T  27990634 ttgtcaatatttatatttta 27990653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 14998147 - 14998274
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| |||||| |||| | ||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||| |    
T  14998147 gggaacttctacggtacacctcacaaattgtggtgtatcggtactctcgctctataaatttataaattaaggatcattttatgaaataaaaagctattag 14998246  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || ||||||||| |||||| ||||    
T  14998247 tcaatacttatatttttgaaaacatcat 14998274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 15804667 - 15804537
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaatt-aacattcattttatgaaataaaaagctatttgt 189  Q
    |||||||||||||| ||||||| |||||||||| |||| ||||||||||  |||||| |||||||| || | ||||||||||||||||| || |||||||    
T  15804667 gaacttctacggtacacctcatcaattgaggtgtaccgatactcctgctacataaatttataaattaaaaaatcattttatgaaataaatagttatttgt 15804568  T
Q  190 cattaattatattttagaaaacttcatctca 220  Q
    || |  |||||||||||||||| ||||||||    
T  15804567 caatgtttatattttagaaaacatcatctca 15804537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 29385089 - 29384968
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||| |||||||||| |||||| ||||||||||| |||| ||||||| ||  |||||| |||||||||||| ||||||||| ||||||  || ||||||    
T  29385089 gggaatttctacggtacacctcacaaattgaggtgtaccgatactccttctacataaatttataaattaacaatcattttataaaataagtagttatttg 29384990  T
Q  189 tcattaattatattttagaaaa 210  Q
    ||| |  |||||||||||||||    
T  29384989 tcaatgtttatattttagaaaa 29384968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 11510721 - 11510843
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    ||||||||| || ||||||||||||||||||||||||||||||| ||  | |||| ||| |||||||  | |||||||||||||||| | ||||| |||     
T  11510721 acttctacgatacacctcataaattgaggtgcaccggtactcctacttcaaaaatttat-aattaacgattattttatgaaataaaatgttatttatcaa 11510819  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  11510820 tatttatattttagaaaacatcat 11510843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 29815535 - 29815404
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||| | ||||||||  |||||| ||||||||||   ||||||||| || |||   | ||||||    
T  29815535 gggaacttctacggtacacctcacaaattgaggtgtaccgatgctcctgcttcataaatttataaattaattatcattttattaattaagttgttatttg 29815436  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    ||| || |||||||||||||||| ||||||||    
T  29815435 tcaatatttatattttagaaaacatcatctca 29815404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 20199754 - 20199633
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  20199754 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaaggatcattttatgaaataagttgttatttg 20199656  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| ||||||||||||||||    
T  20199655 tcattatttatattttagaaaac 20199633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 35375511 - 35375629
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattt-tatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| ||||||||||| | |||||||| || |  |||||| |||||||||||| |||||| ||| ||||||| ||||||||    
T  35375511 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcttgattcataaatttataaattaacaatcatttatattaaataaagagctattt 35375610  T
Q  188 gtcattaattatattttag 206  Q
    |||| || ||| |||||||    
T  35375611 gtcaatatttaaattttag 35375629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 51996422 - 51996550
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| || ||| ||||||||||| |||| ||||||| ||  |||||| |||||||||||| ||||||||||||||||  || ||| |||||    
T  51996422 aacttctacggtacacatcacaaattgaggtgtaccgatactcctactacataaatttataaattaacaatcattttatgaaataagtagttatgtgtca 51996521  T
Q  192 ttaattatattttagaaaacttcatctca 220  Q
     |  ||||||||| ||||||  |||||||    
T  51996522 atgtttatatttttgaaaacaccatctca 51996550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 48795439 - 48795566
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| | ||| |||||| |||||||||||   |||||||| ||||  |||| | ||||    
T  48795439 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttactccataaatttataaattaactaccattttataaaatttaaagttgtttg 48795538  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
      | || |||||||||||||||| ||||    
T  48795539 ataatatttatattttagaaaacatcat 48795566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 1129129 - 1129257
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||||||||  |||| | |||||||||||  |||||||  ||| |||||| |||||||    
T  1129129 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 1129227  T
Q  187 tgtcattaattatattttagaaaacttcat 216  Q
    ||||| || |||||||||| ||||| ||||    
T  1129228 tgtcaatatttatattttataaaacatcat 1129257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 24397790 - 24397669
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| |||||| |||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  24397790 gggagcttctatggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 24397692  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| ||||||||||||||||    
T  24397691 tcattatttatattttagaaaac 24397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 47175872 - 47175755
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| |||||||||||||||||| |||| |||| |||||  |||||  | ||||||||   ||||||||||||||||   | |||||||||    
T  47175872 aacttctacggtacacctcataaattgaggtgtaccgatact-ctgcttcataaaattttaaattaatgatcattttatgaaataagttgttatttgtca 47175774  T
Q  192 ttaattatattttagaaaa 210  Q
    ||| |||||||||||||||    
T  47175773 ttatttatattttagaaaa 47175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 29698322 - 29698438
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||| || | || || || |||||  | ||||||||||||||| || |||||     
T  29698322 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgctttaaatatttacaatttaacgattattttatgaaataaagagttattta 29698421  T
Q  189 tcattaattatatttta 205  Q
    ||| |  ||||||||||    
T  29698422 tcaatttttatatttta 29698438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 4521269 - 4521399
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| || |  |||||| ||||||||||   ||||||||||| ||||   | ||||||    
T  4521269 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgtttcataaatttataaattaatgatcattttatgagataagttgttatttg 4521367  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  4521368 tcattatttatattttagaaaacaccatctca 4521399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 25480298 - 25480421
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||| ||||| |||| | ||||||||||| ||| |||||| | ||  |||||| ||||| |||||| ||||||||| |||||||||| ||||||    
T  25480298 gggagcttctgcggtacaccttacaaattgaggtgtaccagtactcttacttcataaatttataagttaacaatcattttataaaataaaaagttatttg 25480397  T
Q  189 tcattaattat-attttagaaaac 211  Q
    ||| || |||| ||||||||||||    
T  25480398 tcaatatttataattttagaaaac 25480421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 42623016 - 42622890
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||| || ||||||| || ||| ||||||||||| |||||||||| |  |  |||||| |||||||||||  || ||||||||||||| ||||||||||    
T  42623016 gggaaattttacggtacacttcacaaattgaggtgtaccggtactcttttttcataaatttataaattaacgatc-ttttatgaaataagaagctatttg 42622918  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || || ||||||||||||| ||||    
T  42622917 tcagtatttgtattttagaaaacatcat 42622890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 8966337 - 8966236
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||||||||   ||||| |||  ||||||| || |||||||||||||||||| |||||    
T  8966337 gggaacttctacggtacac-tcataaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttattt 8966239  T
Q  188 gtc 190  Q
    |||    
T  8966238 gtc 8966236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 13867063 - 13867152
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaag 181  Q
    ||||||||||||| |||||| |||||||| || |  |||| || | ||| |||||| |||||||||||| ||||||||||||||||||||    
T  13867063 aacttctacggtacacctcacaaattgagctgtattggtattctttctccataaatttataaattaacaatcattttatgaaataaaaag 13867152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 36789887 - 36790007
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||| ||| |||| |||| |||||  |||||| ||||||||||   ||||||| ||||||||   | |||||     
T  36789887 gggagcttctacggtacacctcataaattgatgtgtaccgatact-ctgcttcataaatttataaattaatgatcattttttgaaataagttgttattta 36789985  T
Q  189 tcattaattatattttagaaaa 210  Q
    |||||| |||||||||||||||    
T  36789986 tcattatttatattttagaaaa 36790007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 46937031 - 46936950
Alignment:
Q  130 tactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||| |||||||||||| ||||||||||   | ||||||||||||||||||||||| || | || ||||||||||||||||    
T  46937031 tactcttgctctataaatttataaattaaggattattttatgaaataaaaagctattagttaatatttatattttagaaaac 46936950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 26456971 - 26457070
Alignment:
Q  108 ctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||||||| ||||||| |||||||||||||||  |||| | |||||||||||  |||  ||||||| |||||| |||||||||||| || ||||||||||    
T  26456971 ctcataaagtgaggtgaaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatttgtcaatatttatatttta 26457070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 32121899 - 32122015
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||| ||||||| |||||||||||||||  | | || || || |||||  | |||||||||||||||||| |||||     
T  32121899 gggaacttctacggtacacctcacaaagtgaggtgtaccggtactcctgcttcaaatatttacaatttaactattattttatgaaataaaaagttattta 32121998  T
Q  189 tcattaattatatttta 205  Q
    ||| || || |||||||    
T  32121999 tcaatatttctatttta 32122015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 31185430 - 31185560
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||| ||||||| || ||| ||||||||||| |||| ||||| || | ||||||| ||||||||||   |||||||||||||||||  | |||||     
T  31185430 gggagcttttacggtacacttcacaaattgaggtgtaccgatactc-tgttttataaatttataaattaatgatcattttatgaaataaattgttattta 31185528  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||  ||||||||||||||||  |||||||    
T  31185529 tcattttttatattttagaaaacaccatctca 31185560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 39541077 - 39540948
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||  |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  39541077 gggagcttctacggtgcacctcacaaattgaggtgtaccgatactc-tgcttcataaat-tataaattaatgatcattttatgaaataagttgttatttg 39540980  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||| |||||  |||||||    
T  39540979 tcattatttatattttaaaaaacaccatctca 39540948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 9252259 - 9252158
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || || |||||||||||| |||||||||| ||||  ||| || ||||||||||| ||  ||||||||||||||| || |||||    
T  9252259 gggaacttctacggtacac-tcgtaaattgaggtgtaccggtactcttgcttcatatatctataaattaacgatcaattttatgaaataaatagttattt 9252161  T
Q  188 gtc 190  Q
    |||    
T  9252160 gtc 9252158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 29806415 - 29806294
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || ||  ||||||||||| |||||||||| ||||   ||||| ||||||||||| ||| ||||||||||||||| |  |||||    
T  29806415 gggaacttctacggtacac-tcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacaattaattttatgaaataaataattattt 29806317  T
Q  188 gtcattaattatattttagaaaa 210  Q
    | ||  | |||||||||||||||    
T  29806316 gccagcatttatattttagaaaa 29806294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 7347438 - 7347369
Alignment:
Q  148 gtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||  |||||||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  7347438 gtataaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 7347369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 35320415 - 35320488
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||| ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  35320415 aaatttataaattaacaatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 35320488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 48990670 - 48990573
Alignment:
Q  121 gtgcaccggtactcctgctctataaa-tgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||||| || | |||||| | ||||||| || | |||||||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  48990670 gtgcaccggtactcttgttttataaaatatataaatcaaaaatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 48990573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 52776453 - 52776570
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| |||||||||||||||||| |||||||||| |  |  | |||| ||||| |||||  | ||||||||||||||| |  ||||| | |     
T  52776453 acttctacggtacacctcataaattgaggtgtaccggtactcatatttcaaaaatttataatttaacgattattttatgaaataaagaattatttattaa 52776552  T
Q  193 taattatattttagaaaa 210  Q
    || |||||||||||||||    
T  52776553 tatttatattttagaaaa 52776570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 8433830 - 8433711
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaaca-ttcattttatgaaataaaaagctatttgt 189  Q
    |||||||||||||| | ||  ||||||| |||| |||||||||| ||||   ||||| |||||||||||| || ||||||||||||||| || |||||||    
T  8433830 gaacttctacggtacatctg-taaattgtggtgtaccggtactcttgcttcttaaatttataaattaacaattaattttatgaaataaatagttatttgt 8433732  T
Q  190 cattaattatattttagaaaa 210  Q
    |   | |||||||||||||||    
T  8433731 cggcatttatattttagaaaa 8433711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 43903479 - 43903363
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| | |||||||||| ||  | | || || || |||||  | ||||||||||||||| || |||||     
T  43903479 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctccttcaaatatttacaatttaacgattattttatgaaataaagagttattta 43903380  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  43903379 tcaatatttatatttta 43903363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 19914418 - 19914319
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||| ||||| |||||||||| ||||  |||||| ||||||||||| ||  ||||||||||||||| || ||||||||   | |||||||||||||||    
T  19914418 taaattaaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaaa 19914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 40478164 - 40478048
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||||||||  |||| | |||||||||||  |||  ||||||| |||||| |||||||    
T  40478164 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 40478066  T
Q  187 tgtcattaattatatttta 205  Q
    | ||| || ||||||||||    
T  40478065 t-tcaatatttatatttta 40478048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 44379414 - 44379531
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||||||||  |||| | |||||||||||   ||  ||||||| |||||| | |||||    
T  44379414 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactatt 44379512  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  44379513 tgtcaatatttatatttta 44379531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 3732280 - 3732389
Alignment:
Q  106 acctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    |||||| ||||||||||| |||||||||| ||||| | |||| || ||||||||   |||||||| |||||||||| || |||||| |  ||||||||||    
T  3732280 acctcacaaattgaggtgtaccggtactcttgctccaaaaat-tacaaattaacgaccattttataaaataaaaagttagttgtcaatgtttatatttta 3732378  T
Q  206 gaaaacttcat 216  Q
     ||||| ||||    
T  3732379 aaaaacatcat 3732389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 882076 - 882003
Alignment:
Q  144 aaatgtataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||||||| || |||||||||| ||||||||| || |||||||||||||||| ||||    
T  882076 aaatttataaattaacgatcatttttataaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 882003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 31479926 - 31479829
Alignment:
Q  116 ttgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaact 212  Q
    |||||||| ||  |||||| ||||| |||||| ||||||||||| |    |||||| ||||||||||||||||| || || |||||||||||||||||    
T  31479926 ttgaggtgtactagtactcttgctccataaatttataaattaactaccttttttataaaataaaaagctatttgacaatatttatattttagaaaact 31479829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 32720338 - 32720265
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  32720338 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 32720265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 50465824 - 50465751
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  50465824 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 50465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 19547895 - 19547773
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| ||| || ||||| ||||| |||||||||||| || || |||| | ||||||||   | |  ||||||| |||||| |||||||    
T  19547895 gggaacttctacggtacacc-cacaaattaaggtgtaccggtactcctactttaaaaatctttaaattaattattattttttatggaataaagagctatt 19547797  T
Q  187 tgtcattaattatattttagaaaa 210  Q
    ||| | || |||||||||||||||    
T  19547796 tgttaatatttatattttagaaaa 19547773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 5335366 - 5335485
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| | |||| ||||||||||| |||| ||||| ||||  |||||| || || ||||   ||||||||| ||||||| |  || ||||||    
T  5335366 aacttctacggtacatctcacaaattgaggtgtaccgatactcttgcttcataaatttacaagttaaatatcattttataaaataaagaattaattgtca 5335465  T
Q  192 ttaattatattttagaaaac 211  Q
     || ||| ||||||||||||    
T  5335466 atatttacattttagaaaac 5335485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 7862824 - 7862734
Alignment:
Q  117 tgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttgtcattaattatatttta 205  Q
    ||||||| |||||||||||||||  |||| | |||||||||||  | |  ||||||| |||||| |||||||||||| || ||||||||||    
T  7862824 tgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgtcaatatttatatttta 7862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 9322511 - 9322558
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  9322511 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 9322558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 15298216 - 15298338
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||| ||| |||||||||||||||||| || ||||||| | || |  |||| ||||| |||||  | ||||||| ||||||| || ||||  |||     
T  15298216 acttctactgtacacctcataaattgaggtgtactggtactcttact-tcaaaatttataatttaacgattattttataaaataaagagttattcatcaa 15298314  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  15298315 tatttatattttagaaaacatcat 15298338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 33830856 - 33830809
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33830856 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 33830809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 35352271 - 35352318
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  35352271 atgaaataaaaaggtatttgtcaatatttatattttagaaaacgtcat 35352318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 36019497 - 36019544
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  36019497 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 36019544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 37520702 - 37520819
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||| | ||  |||| | |||||||||||  |||||||  |||||||||| | |||||    
T  37520702 gggaacttctacggtacac-tcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaataaataactatt 37520800  T
Q  187 tgtcattaattatatttta 205  Q
    | ||| || ||||||||||    
T  37520801 tatcaatatttatatttta 37520819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 39678486 - 39678396
Alignment:
Q  117 tgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctatttgtcattaattatatttta 205  Q
    ||||||| | ||||||| ||||| ||||| | |||||||||||  |||||||  |||||||||| |||||||||| | || ||||||||||    
T  39678486 tgaggtgtatcggtacttctgctttataattttataaattaacgatcattttttatgaaataaatagctatttgttaatatttatatttta 39678396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 44500216 - 44500263
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  44500216 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 44500263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 44962930 - 44962883
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  44962930 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 44962883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 45635681 - 45635783
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc-attttatgaaataaaaagctattt 187  Q
    |||||||||||||||| | |||||||||| | ||| ||||||||  ||||| | ||||| |||| ||||||| || ||| ||||||||||| || |||||    
T  45635681 gggaacttctacggtaca-ctcataaattaaagtgtaccggtacctctgctttctaaatttatacattaacaatcaattctatgaaataaatagttattt 45635779  T
Q  188 gtca 191  Q
    ||||    
T  45635780 gtca 45635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 48925492 - 48925539
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  48925492 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 48925539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 49951005 - 49951052
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  49951005 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 49951052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 51235847 - 51235800
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  51235847 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 51235800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 52024437 - 52024559
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatt 186  Q
    ||||||||||||| ||| || || |||||||||||| || ||||||| || |  |||||| |||||| ||||  ||| |||||||||||||| || ||||    
T  52024437 ggggaacttctactgtacac-tcgtaaattgaggtgtacaggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatt 52024535  T
Q  187 tgtcattaattatattttagaaaa 210  Q
    ||||   | |||||||||||||||    
T  52024536 tgtcggcatttatattttagaaaa 52024559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 52058514 - 52058617
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct-gctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| |||||| |||| |||||||||||| |||  ||||||  ||||||| |   | |||||| ||| |||| ||||||||    
T  52058514 gggaacttctacggtacacctcacaaattggggtgtaccggtactccttgcttcataaattgataaatttatgattattttaggaagtaaagagctattt 52058613  T
Q  188 gtca 191  Q
    ||||    
T  52058614 gtca 52058617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 52782240 - 52782287
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  52782240 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 52782287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 53376917 - 53376870
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  53376917 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 53376870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 31226942 - 31226880
Alignment:
Q  149 tataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||||||||||  ||||||||||| ||||| || |||||||||||  |||||||||| |||||    
T  31226942 tataaattaacgatcattttatgacataaatagttatttgtcattgtttatattttataaaac 31226880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 41982391 - 41982437
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    ||||||||||||||| |||||| |||||| |||| ||||||||||||    
T  41982391 ggaacttctacggtacacctcacaaattggggtgtaccggtactcct 41982437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 54009253 - 54009191
Alignment:
Q  149 tataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||    
T  54009253 tataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaa 54009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 4817076 - 4817192
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctattt 187  Q
    ||||| |||||||||| || ||| ||| ||||||| |||||||||| | || ||||| | |||||||||||  ||| ||||||| |||||| || |||||    
T  4817076 gggaatttctacggtacac-tcacaaaatgaggtgtaccggtactcttactttataattttataaattaacgatcatttttatgtaataaatagttattt 4817174  T
Q  188 gtcattaattatatttta 205  Q
     ||| || ||||||||||    
T  4817175 atcaatatttatatttta 4817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 7157119 - 7157160
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  7157119 atgaaataaaaaggtatttgtcaatatttatattttagaaaa 7157160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 26409685 - 26409746
Alignment:
Q  144 aaatgtataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatatttt 204  Q
    |||| |||||||||||  ||||||| ||||||||||||| ||||||||| || |||||||||    
T  26409685 aaatttataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatatttt 26409746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 45602047 - 45602144
Alignment:
Q  113 aaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaa 209  Q
    ||||||||||| | ||||| || ||||   ||||| ||||||||||| ||| ||||||||||||||| || |||||| ||  | ||||||||||||||    
T  45602047 aaattgaggtgtatcggtattcttgcttcttaaatctataaattaacgattaattttatgaaataaatagttatttgccagcatttatattttagaaa 45602144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 47746233 - 47746118
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttg 188  Q
    |||||||||||||| || ||| ||| ||||||| |||| ||||| ||||  |||| | |||||||||||  | |  ||||||| |||||| |||||||||    
T  47746233 gaacttctacggtacac-tcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaatagctatttg 47746135  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  47746134 tcaatatttatatttta 47746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 50206408 - 50206477
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||||| ||||||||||   | ||||||||||||||   | |||||||||||| ||||||||||||||||    
T  50206408 ataaatttataaattaattattattttatgaaataagttgttatttgtcattatttatattttagaaaac 50206477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 23456861 - 23456747
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttgt 189  Q
    ||||||||||||| || ||| ||| ||||||| |||||||||||| ||  |||| | |||||||||||  | |  ||||||| |||||| |||| |||||    
T  23456861 aacttctacggtacac-tcacaaagtgaggtgtaccggtactccttcttcataattttataaattaacgataattttttatgtaataaatagctctttgt 23456763  T
Q  190 cattaattatatttta 205  Q
    || || ||||||||||    
T  23456762 caatagttatatttta 23456747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 39289752 - 39289704
Alignment:
Q  136 tgctctataaatgtataaattaacattcattttatgaaataaaaagcta 184  Q
    |||||||||||| ||||||||||   ||||| |||||||||||||||||    
T  39289752 tgctctataaatttataaattaatgatcattctatgaaataaaaagcta 39289704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 210
Target Start/End: Original strand, 52082045 - 52082164
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgt 189  Q
    |||||||||||||| ||| |  ||||| ||||| |||||||||| | ||  | |||| ||||||| ||| |||  ||||||||||||||||| |||||||    
T  52082045 gaacttctacggtacacc-cgcaaattaaggtgtaccggtactcttacttcaaaaatttataaatgaactattatttttatgaaataaaaagttatttgt 52082143  T
Q  190 cattaattatattttagaaaa 210  Q
       || |||||||||||||||    
T  52082144 tgatatttatattttagaaaa 52082164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 55418110 - 55418058
Alignment:
Q  164 attttatgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||| ||||||||||||||||||| |  |||||||||| ||||| ||||    
T  55418110 attttatggaataaaaagctatttgtcaatgtttatattttaaaaaacatcat 55418058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 31588641 - 31588520
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||  || |  |||||| ||||||||||   ||||||||||||||||||| |||||||    
T  31588641 gggaacttctacggtacacctcacaaattgaggtgtaccggtacttttgtttcataaatttataaattaatgatcattttatgaaataaaaaactatttg 31588542  T
Q  189 tcattaattatattttagaaaa 210  Q
    ||| || |||||||||||||||    
T  31588541 tcaatatttatattttagaaaa 31588520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 9499808 - 9499687
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||||||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  9499808 gggagcttctacggtacacctcataaattgaggtgtaccgatactc-tgcttcataaatttataaattaaggatcattttatgaaataagttgttatttg 9499710  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||||||||||||||||||||    
T  9499709 tcattaattatattttagaaaac 9499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 29996902 - 29996774
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaata-aaaagctattt 187  Q
    |||||||||||||||| || ||| ||||| ||||  |||||||||| |||||||||||| |||||||||||  ||||||||||||||| ||||  |||||    
T  29996902 gggaacttctacggtacacatcacaaattaaggtttaccggtactcttgctctataaatttataaattaacgatcattttatgaaataaaaaaaatattt 29996803  T
Q  188 gtcattaattatattttagaaaacttcat 216  Q
    |||  || |||||||||||||||| ||||    
T  29996802 gtccatatttatattttagaaaacatcat 29996774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 777147 - 777270
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||||| | ||||||| | |||| ||||||||||| || |||||||  ||| ||||||| ||||||||||   ||||||||| |||||||||||||||     
T  777147 ggggaacatttacggtacatctcacaaattgaggtgtactggtactctcgctttataaatttataaattaaagatcattttattaaataaaaagctatta 777246  T
Q  188 gtcattaattatattttagaaaac 211  Q
    |||| || ||||||||||||||||    
T  777247 gtcaatatttatattttagaaaac 777270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 2011055 - 2011185
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||| ||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  2011055 gggagcttttacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 2011153  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  2011154 tcattatttatattttagaaaacaccatctca 2011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 13593281 - 13593411
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||| || |  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  13593281 gggagcttctacggtacacctcacaaattgaggtgtaccgatactc-tgtttcataaatttataaattaatgatcattttatgaaataagttgttatttg 13593379  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||| ||||| ||||||||    
T  13593380 tcattatttatattttaaaaaacatcatctca 13593411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 16602360 - 16602490
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| |||||||| || | || ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  16602360 gggagcttctacggtacacctcacaaattgagatgtaacgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttg 16602458  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||||||||| ||||||||    
T  16602459 tcattatttatattttagaaaacatcatctca 16602490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 19239200 - 19239070
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| |||||| |||| |||||||||||||||||| | || |||||| |||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  19239200 gggagcttctatggtacacctcataaattgaggtgtatcgatactcc-gcttcataaatttataaattaatggtcattttatgaaataagttgttatttg 19239102  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| |||||||||||||||| || |||||    
T  19239101 tcattatttatattttagaaaacatcgtctca 19239070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 23408655 - 23408532
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| || ||||||||||||||| ||| || || || ||  | |||| ||||| |||||  ||||||||||||||||| || ||||| |||     
T  23408655 acttctacggtacacttcataaattgaggtgtaccagtgcttctacttcaaaaatttataatttaacgatcattttatgaaataaagagttatttatcaa 23408556  T
Q  193 taattatattttagaaaacttcat 216  Q
    || |||||||||||||||| ||||    
T  23408555 tatttatattttagaaaacatcat 23408532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 28205179 - 28205053
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||||| |||||| | |||| ||||||||||| |||| | |||  ||||||||||| ||||||||||   | |||||||||||||||||||||||      
T  28205179 gggaacttcaacggtacatctcacaaattgaggtgtaccgat-ctctcgctctataaatttataaattaaggattattttatgaaataaaaagctattaa 28205081  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    | | || |||||||||||||||| ||||    
T  28205080 ttaatatttatattttagaaaacatcat 28205053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 13091319 - 13091198
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctattt 187  Q
    |||||||||||||||| ||| | |||||| ||||| |||||||||| | ||  | |||| |||||||||||  ||||||| |||||||||||||||||||    
T  13091319 gggaacttctacggtacacc-cgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctattt 13091221  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   || |||||||||||||||    
T  13091220 gttgatatttatattttagaaaa 13091198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 4367195 - 4367074
Alignment:
Q  89 gggaacttctacggtaaacctcataaat-tgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| |||  ||||||| | ||||||||||| |  | |||| ||||| |||||  ||||||||||||||||| || |||||    
T  4367195 gggaacttctacggtacacctcacaaaagtgaggtgtatcggtactcctggttcaaaaatttataatttaacgatcattttatgaaataaagagttattt 4367096  T
Q  188 gtcattaattatattttagaaa 209  Q
     ||| || ||||||||||||||    
T  4367095 atcagtatttatattttagaaa 4367074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 5140672 - 5140785
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||| | || | || ||||| |||||  | |||||||||||| || || ||||| |||    
T  5140672 aacttctacggtacacctcacaaattgaggtgtaccggtactcctgttttaaatatttataatttaacgattattttatgaaatgaagagttatttatca 5140771  T
Q  192 ttaattatatttta 205  Q
     || ||||||||||    
T  5140772 atatttatatttta 5140785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 10118249 - 10118373
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    ||||| |||| |||||||||||||||||| || | || || ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||||||||    
T  10118249 ttctatggtacacctcataaattgaggtgtactgatattc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttgtcatta 10118347  T
Q  195 attatattttagaaaacttcatctca 220  Q
     ||||||||||||||||  |||||||    
T  10118348 tttatattttagaaaacaccatctca 10118373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 35162717 - 35162596
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||||||||| || |||||||||||| ||||| |  ||||||| ||||  |||||| |||||||||||  |||||||   ||||||||||||||||     
T  35162717 gggaacttctacgttacacctcataaattaaggtgtattggtactcttgcttcataaatttataaattaacgatcattttgaaaaataaaaagctattta 35162618  T
Q  189 tcattaattatattttagaaaa 210  Q
    | | || |||| ||||||||||    
T  35162617 ttaatatttatgttttagaaaa 35162596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 5204617 - 5204733
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| | ||||||||||||| || | || || || |||||  | ||||||||||||||| || |||||     
T  5204617 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgctttaaatatttacaatttaacgattattttatgaaataaagagttattta 5204716  T
Q  189 tcattaattatatttta 205  Q
    ||  || ||||||||||    
T  5204717 tcgatatttatatttta 5204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 12336615 - 12336500
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||    |||||||||||||||   | ||||||||||||    
T  12336615 ttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaaagaccattttatgaaataagttgttatttgtcatta 12336517  T
Q  195 attatattttagaaaac 211  Q
     |||||||||| |||||    
T  12336516 tttatattttaaaaaac 12336500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 220
Target Start/End: Complemental strand, 36410314 - 36410183
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| ||||||||||| |||||| | ||| ||||| |||| ||||| |||| ||||||| ||||||||||   ||||||||||||||||     |||||    
T  36410314 ggggagcttctacggtacacctcacatattaaggtgtaccgatactc-tgctttataaatttataaattaatgatcattttatgaaataagttattattt 36410216  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
    ||||||| | ||||||||||||||  |||||||    
T  36410215 gtcattattcatattttagaaaacaccatctca 36410183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 39939033 - 39939149
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  39939033 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 39939132  T
Q  189 tcattaattatatttta 205  Q
    ||| || |||| |||||    
T  39939133 tcaatatttatgtttta 39939149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 17069392 - 17069290
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatt 186  Q
    ||||||||||||||||  || || |||||||||||| |||||||||||||||  |||||| |||||| |||| ||  ||||||||||||||| || ||||    
T  17069392 ggggaacttctacggtgcac-tcgtaaattgaggtgtaccggtactcctgcttcataaatctataaactaacgatcaattttatgaaataaatagttatt 17069294  T
Q  187 tgtc 190  Q
    ||||    
T  17069293 tgtc 17069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 36156225 - 36156126
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||| |||||||||| |||| ||||||| |||||| |||| ||  ||||||||||||||| || ||||||||   | |||||||||||||||    
T  36156225 taaattgaggtgtaccggtactcttgctttataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaaa 36156126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 4039469 - 4039591
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||| ||||| |||||||||| | ||  |||||| ||||||||||    |||||||| |||||||| | |||||     
T  4039469 gggaacttctacggtacacctcacaaattaaggtgtaccggtactcttacttcataaatttataaattaattaccattttataaaataaaatgttattta 4039568  T
Q  189 tcattaattatattttagaaaac 211  Q
      | || ||||||||||||||||    
T  4039569 ataatatttatattttagaaaac 4039591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 6335797 - 6335676
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| |||| |||| ||| |  |||||| ||||||||||    |||||||||||||||   | ||||||    
T  6335797 gggagcttctacggtacacctcacaaattgaggtgtaccgatact-ctgtttcataaatttataaattaaagaccattttatgaaataagttgttatttg 6335699  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| |||||||||| |||||    
T  6335698 tcattatttatattttaaaaaac 6335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 39979750 - 39979681
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaa 158  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||| |||||  |||||| ||||||||||    
T  39979750 gggaacttctacggtacacctcacaaattgaggtgtaccgatacttctgcttcataaatttataaattaa 39979681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 23690501 - 23690617
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| ||||||| | |||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  23690501 gggaacttctacggtacacctcaaaaattgaggtgtaccggtatttctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 23690600  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  23690601 tcaatatttatatttta 23690617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 40756541 - 40756657
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| | |||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  40756541 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgcttcaaatatttacaatttaaccattattttatgaaataaagagttattta 40756640  T
Q  189 tcattaattatatttta 205  Q
    ||  || ||||||||||    
T  40756641 tcgatatttatatttta 40756657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 2270806 - 2270905
Alignment:
Q  112 taaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||||||||||| |||||||||| ||||  |||||| ||||||||||| ||  ||||||||||||||| |  ||||||||   | |||||||||||||||    
T  2270806 taaattgaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaa 2270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 5512682 - 5512785
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct-gctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||| |||  ||||||  ||||||| |   | ||||||| || |||| ||||||||    
T  5512682 gggaacttctacggtacacctcacaaattgaggtgtaccggtactccttgcttcataaattgataaatttatgattattttataaagtaaagagctattt 5512781  T
Q  188 gtca 191  Q
    ||||    
T  5512782 gtca 5512785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 19189510 - 19189387
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| ||||||||||||||||||  |  |||||||| ||  | |||| ||||| |||||  | ||||||||||||||| || ||||  |||     
T  19189510 acttctacggtacacctcataaattgaggtgtgctcgtactcctacttcaaaaatttataatttaacgattattttatgaaataaagagttattcatcaa 19189411  T
Q  193 taattatattttagaaaacttcat 216  Q
    ||  ||||||||||||||| ||||    
T  19189410 tatatatattttagaaaacatcat 19189387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 29665820 - 29665950
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| ||||||    |||||||| |||| ||||| || |  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  29665820 gggagcttctacggtacacctcaatttttgaggtgtaccgatactc-tgtttcataaatttataaattaaggatcattttatgaaataagttgttatttg 29665918  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  29665919 tcattatttatattttagaaaacaccatctca 29665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 34901657 - 34901704
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  34901657 gggaacttctacggtacacctcataaattggggtgtaccggtactcct 34901704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 16432658 - 16432716
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaat 147  Q
    |||||||| ||||||| || ||||||||||||||| ||||| ||||||||| |||||||    
T  16432658 gggaacttttacggtacacttcataaattgaggtgtaccggaactcctgctttataaat 16432716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 13544093 - 13544218
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtc 190  Q
    |||||||||  ||| || |||||||||||||| ||||| |||| |||||| | ||||  |||| ||||   ||||||||| ||||||| || ||||| ||    
T  13544093 gaacttctaatgtacacttcataaattgaggtacaccgatacttctgctccaaaaattgataatttaaagatcattttataaaataaagagttatttatc 13544192  T
Q  191 attaattatattttagaaaacttcat 216  Q
    | || |||||||||| ||||| ||||    
T  13544193 aatatttatattttataaaacatcat 13544218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 28770001 - 28770074
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  28770001 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 28770074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 33001522 - 33001595
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33001522 aaatttataaattaacgatcagtttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 33001595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 34859489 - 34859562
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||| ||| |||| |||||||||||| ||||| ||| || |||||||||||||||| ||||    
T  34859489 aaatttataaattaacaatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcat 34859562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 32624523 - 32624455
Alignment:
Q  149 tataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||||  ||||||| || |||||||||| ||||||||| || |||||||||||||||| ||||    
T  32624523 tataaattaacgatcatttttataaaataaaaagttatttgtcaatatttatattttagaaaacgtcat 32624455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 329121 - 329018
Alignment:
Q  116 ttgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaacttca 215  Q
    |||||||| || | ||||||||||  |||||| ||||||||||   |||||||||||| |||   | ||||||||| || |||| ||||||||||| |||    
T  329121 ttgaggtgtactgatactcctgcttcataaatttataaattaatgatcattttatgaattaagttgttatttgtcaatatttatcttttagaaaacatca 329022  T
Q  216 tctc 219  Q
    ||||    
T  329021 tctc 329018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 6260424 - 6260307
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattc--attttatgaaataaaaagctatt 186  Q
    |||||||||||||||| | |||||||| ||||||| |||||||||| | ||  |||| | ||||||| |||  ||   ||||||| |||||| |||||||    
T  6260424 gggaacttctacggtaca-ctcataaaatgaggtgtaccggtactcttccttcataattttataaataaactatctttttttatgtaataaatagctatt 6260326  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  6260325 tgtcaatatttatatttta 6260307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 7080517 - 7080470
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcct 136  Q
    |||||||||||||||| |||||| |||||| |||| ||||||||||||    
T  7080517 gggaacttctacggtacacctcacaaattggggtgtaccggtactcct 7080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 8068400 - 8068447
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  8068400 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 8068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 13588919 - 13588986
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaa 210  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||    
T  13588919 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaa 13588986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 15726251 - 15726204
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  15726251 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 15726204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 23189148 - 23189195
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  23189148 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 23189195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 25684389 - 25684342
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  25684389 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 25684342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 31236669 - 31236716
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  31236669 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 31236716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 32063606 - 32063653
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  32063606 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 32063653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 36427905 - 36427983
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt 168  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||| ||||| |||| | |||||||||||  |||||||    
T  36427905 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcttgctcaataattttataaattaacgatcatttt 36427983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 13119202 - 13119089
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatttgtc 190  Q
    ||||||||||||| || | | ||| ||||||| |||||||||||||||  |||| | |||||||||||  ||| ||||||  |||||| |||||||| ||    
T  13119202 aacttctacggtacactt-acaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcatttttatataataaatagctatttttc 13119104  T
Q  191 attaattatatttta 205  Q
    | || ||||||||||    
T  13119103 aatatttatatttta 13119089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 14967637 - 14967516
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctattt 187  Q
    |||||||||||||||| ||||   ||||| ||||| | |||||||| | ||  | |||| |||||||||||  ||||||| |||||||||||||||||||    
T  14967637 gggaacttctacggtacacctgc-aaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctattt 14967539  T
Q  188 gtcattaattatattttagaaaa 210  Q
    ||   ||  ||||||||||||||    
T  14967538 gttgatatctatattttagaaaa 14967516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 27980180 - 27980064
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctattt 187  Q
    ||||||||||||||||||||| | ||| |||| || | |||||||| || |  |||| | |||||||||||  ||||||| ||| |||||  ||||||||    
T  27980180 gggaacttctacggtaaacct-acaaagtgagatgtagcggtactcttgtttcataattttataaattaacgatcatttttatgtaataattagctattt 27980082  T
Q  188 gtcattaattatatttta 205  Q
    |||| || ||||||||||    
T  27980081 gtcaatatttatatttta 27980064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 37963049 - 37963122
Alignment:
Q  144 aaatgtataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||||||| || |||||||||  ||||||||| || |||||||||||||||| ||||    
T  37963049 aaatttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcat 37963122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 10688716 - 10688672
Alignment:
Q  172 aaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||||||||| ||||||||| || |||||||||||||||| ||||    
T  10688716 aaataaaaaggtatttgtcaatatttatattttagaaaacatcat 10688672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 34259943 - 34259829
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatttgt 189  Q
    ||||||||||||| || | | ||| ||||||  |||||||||||||||  |||| | |||||||||||  |||  ||||||| |||||| | ||||||||    
T  34259943 aacttctacggtatac-taacaaagtgaggtctaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatttgt 34259845  T
Q  190 cattaattatatttta 205  Q
    || || ||||||||||    
T  34259844 caatatttatatttta 34259829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 1706012 - 1705896
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||  | | || ||||| |||||  | ||||||||||||||| || |||||     
T  1706012 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgattattttatgaaataaagagttattta 1705913  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  1705912 tcaatatttatatttta 1705896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 10887809 - 10887930
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||  | |||| ||||| |||||  | ||||||| ||||||| || |||||     
T  10887809 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctacttcaaaaatttataatttaacgattattttataaaataaagagttattta 10887908  T
Q  189 tcattaattatattttagaaaa 210  Q
    ||| || |||||||||| ||||    
T  10887909 tcaatatttatattttaaaaaa 10887930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 229817 - 229932
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||||||||    
T  229817 ttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttatgaaataagttgttatttgtcatta 229915  T
Q  195 attatattttagaaaac 211  Q
     ||||||||||||||||    
T  229916 tttatattttagaaaac 229932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 220
Target Start/End: Complemental strand, 926950 - 926819
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| ||||||||||| |||| ||||||||||||| |||  ||||| ||||  |||||| ||||||||||   ||||||||||||||||   | |||||    
T  926950 ggggagcttctacggtacaccttataaattgaggtgtaccaatactc-tgcttcataaatttataaattaattatcattttatgaaataagttgttattt 926852  T
Q  188 gtcattaattatattttagaaaacttcatctca 220  Q
    ||||||| ||||||||||||||||  |||||||    
T  926851 gtcattatttatattttagaaaacaccatctca 926819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 21999014 - 21998899
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||||||||||||||| |||| ||||| ||||  |||||| ||||||||||   ||||||||| ||||||   | ||||||||||||    
T  21999014 ttctacggtacacctcataaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgatcattttataaaataagttgttatttgtcatta 21998916  T
Q  195 attatattttagaaaac 211  Q
     ||||||||||||||||    
T  21998915 tttatattttagaaaac 21998899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 24081154 - 24081272
Alignment:
Q  98 tacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaatt 197  Q
    ||||||| |||||| |||||||| || |  ||||||  ||||| |||||| |||||||||||  | |||||||||||||||| ||||||||||| || ||    
T  24081154 tacggtacacctcacaaattgagatgtattggtacttttgctccataaatttataaattaacgataattttatgaaataaaatgctatttgtcaatattt 24081253  T
Q  198 atattttagaaaacttcat 216  Q
    ||||||||| |||| ||||    
T  24081254 atattttagtaaacatcat 24081272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 7344325 - 7344442
Alignment:
Q  93 acttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcat 192  Q
    |||||||||||| ||| |||||||||||||| |||||||||||| ||| | |||| ||||| ||||   | ||||||||||||||| || ||||| ||      
T  7344325 acttctacggtacaccacataaattgaggtgtaccggtactcctactccaaaaatttataatttaaggattattttatgaaataaagagttatttatcga 7344424  T
Q  193 taattatattttagaaaa 210  Q
    || |||||||||||||||    
T  7344425 tatttatattttagaaaa 7344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 1339779 - 1339653
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| || ||| ||||||||||| ||| ||||| |||||  | |||| ||||| |||||  ||||||||||||||||| || |||||     
T  1339779 gggaacttctacggtacacgtcacaaattgaggtgtaccagtacttctgcttca-aaatttataatttaacgatcattttatgaaataaagagttattta 1339681  T
Q  189 tcattaattatattttagaaaacttcat 216  Q
    ||| || |||||||||| ||||| ||||    
T  1339680 tcaatatttatattttataaaacatcat 1339653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 31644409 - 31644531
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctatt 186  Q
    ||||||||||||||||| || || |||||||||||| | |||||||| ||||  |||||| |||||| ||||| ||| |||||||||||||| || ||||    
T  31644409 ggggaacttctacggtacac-tcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacaatcaattttatgaaataaatagttatt 31644507  T
Q  187 tgtcattaattatattttagaaaa 210  Q
    ||||   | |||||||||||||||    
T  31644508 tgtcggcatttatattttagaaaa 31644531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 14508027 - 14507977
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgct 139  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  14508027 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgct 14507977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 16893302 - 16893178
Alignment:
Q  91 gaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtc 190  Q
    ||||||||| |||| |||||| ||||||||||| ||||||||||   ||  |||||| |||||||||||  |  |||||| ||||||| || ||||||||    
T  16893302 gaacttctatggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaacgattgttttattaaataaataggtatttgtc 16893203  T
Q  191 attaattatattttagaaaacttcat 216  Q
    | | ||||||||||||||||| ||||    
T  16893202 aat-attatattttagaaaacatcat 16893178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 19474078 - 19473962
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| ||||  | | || |  || |||||| | ||||||||||||||| || |||||     
T  19474078 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttgcttcaaatattttcaatttaacaattattttatgaaataaagagttattta 19473979  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  19473978 tcaatatttatatttta 19473962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 21294196 - 21294080
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||||||  | | || || ||  ||||  | ||||||||||||||| || |||||     
T  21294196 gggaactcctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatatttacaatgtaacgattattttatgaaataaagagttattta 21294097  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  21294096 tcaatatttatatttta 21294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 2994321 - 2994372
Alignment:
Q  88 ggggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgct 139  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  2994321 ggggaacttctacagtacacctcataaattgaggtgtaccggtactcctgct 2994372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 6295784 - 6295655
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| | ||||||| |||||  |||||| ||||||||||   | ||||||| ||||||   | ||||||    
T  6295784 gggagcttctacggtacacctcacaaattgaggtgtatcggtact-ctgcttcataaatttataaattaatgat-attttattaaataagttgttatttg 6295687  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  6295686 tcattatttatattttagaaaacaccatctca 6295655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 6302594 - 6302465
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| | ||||||| |||||  |||||| ||||||||||   | ||||||| ||||||   | ||||||    
T  6302594 gggagcttctacggtacacctcacaaattgaggtgtatcggtact-ctgcttcataaatttataaattaatgat-attttattaaataagttgttatttg 6302497  T
Q  189 tcattaattatattttagaaaacttcatctca 220  Q
    |||||| ||||||||||||||||  |||||||    
T  6302496 tcattatttatattttagaaaacaccatctca 6302465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 10966030 - 10965980
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgct 139  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  10966030 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgct 10965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 14002398 - 14002519
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| | || ||||| ||||  |||||| ||||||||||   | ||||||||||||||   | ||||||    
T  14002398 gggagcttctacggtacacctcagaaattgaggtgtatcgatactc-tgcttcataaatttataaattaatgattattttatgaaataagttgttatttg 14002496  T
Q  189 tcattaattatattttagaaaac 211  Q
    ||||||  |||||||||||||||    
T  14002497 tcattatatatattttagaaaac 14002519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 14872332 - 14872457
Alignment:
Q  94 cttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatt 193  Q
    ||||||||||| |||||| ||||||||||| |||| ||||| ||||  |||||  | ||||||||   ||||||||||||||||   | ||||| |||||    
T  14872332 cttctacggtacacctcacaaattgaggtgtaccgatactc-tgcttcataaaattttaaattaatgatcattttatgaaataagttgttatttatcatt 14872430  T
Q  194 aattatattttagaaaacttcatctca 220  Q
    | ||||||||||||||||  |||||||    
T  14872431 atttatattttagaaaacaccatctca 14872457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 24151124 - 24151245
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| ||||||||||| | || ||||| ||||  |||||| ||||||||||    |||||||||||||||   | ||||||    
T  24151124 gggagcttctacggtacacctcacaaattgaggtgtatcgatactc-tgcttcataaatttataaattaaagaccattttatgaaataagttgttatttg 24151222  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| |||||||||| |||||    
T  24151223 tcattatttatattttaaaaaac 24151245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 29023619 - 29023720
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || || |||||||||||| |||||||||| ||||  |||||| |||||| |||| ||  ||||||||||||||| || |||||    
T  29023619 gggaacttctacggtacac-tcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttattt 29023717  T
Q  188 gtc 190  Q
    |||    
T  29023718 gtc 29023720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 24249212 - 24249096
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| |||| | ||||||||||| | |||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  24249212 gggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 24249113  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  24249112 tcaatatttatatttta 24249096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 6974748 - 6974841
Alignment:
Q  119 aggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaag---ctatttgtcattaattatattttagaaa 209  Q
    ||||| |||||||||| | ||  |||||| || ||||||||| ||||||||||||||||||||   |||||| ||| || ||||||||||||||    
T  6974748 aggtgtaccggtactcttacttcataaatttaaaaattaacaatcattttatgaaataaaaagctactatttatcaatatttatattttagaaa 6974841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 33574759 - 33574643
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||| ||||  |||| | |||||||||||  |||  ||||||| |||||| |||||||    
T  33574759 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 33574661  T
Q  187 tgtcattaattatatttt 204  Q
    | ||| || |||||||||    
T  33574660 tttcaatatttatatttt 33574643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 33574937 - 33574821
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca--ttttatgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||| ||||  |||| | |||||||||||  |||  ||||||| |||||| |||||||    
T  33574937 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 33574839  T
Q  187 tgtcattaattatatttt 204  Q
    | ||| || |||||||||    
T  33574838 tttcaatatttatatttt 33574821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 4509835 - 4509720
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||||||||  |||| | ||||||||||| ||   ||||||| |||||| ||||||||    
T  4509835 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatattttttatgtaataaatagctattt 4509737  T
Q  188 gtcattaattatatttta 205  Q
     ||| || ||||||||||    
T  4509736 -tcaatatttatatttta 4509720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 9226553 - 9226480
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  9226553 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 9226480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 15383204 - 15383324
Alignment:
Q  90 ggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac-attcattttatgaaataaaaagctatttg 188  Q
    ||||||||||||||| ||| |  ||||| ||||| |||||||||||| ||  | |||| | ||||||||| |||  ||||||| ||||||||||||||||    
T  15383204 ggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttg 15383302  T
Q  189 tcattaattatattttagaaaa 210  Q
    |   || |||||||||||||||    
T  15383303 ttgatatttatattttagaaaa 15383324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 34315179 - 34315252
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||||  ||| |||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  34315179 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 34315252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 26811110 - 26811042
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||| ||||||||||   |||||||| |||||||||||| ||||||||| || ||||||||||||||||    
T  26811110 aaatatataaattaaagatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaac 26811042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 1339180 - 1339133
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  1339180 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 1339133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 16989193 - 16989240
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  16989193 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 16989240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 18871249 - 18871202
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  18871249 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 18871202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 27719085 - 27719132
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  27719085 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 27719132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 32518828 - 32518875
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  32518828 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 32518875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 33954778 - 33954731
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  33954778 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 33954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 35224910 - 35224957
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  35224910 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 35224957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 11273384 - 11273505
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||| ||||||||||| |||||| |||||||  || || | ||||  ||||  |||||| ||||||||||   ||||||||||||||||   | ||||||    
T  11273384 gggagcttctacggtacacctcacaaattgaaatgtactgatactt-tgcttcataaatttataaattaaagatcattttatgaaataagttgttatttg 11273482  T
Q  189 tcattaattatattttagaaaac 211  Q
    |||||| |||||||||| |||||    
T  11273483 tcattatttatattttaaaaaac 11273505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 21970713 - 21970612
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattca-ttttatgaaataaaaagctattt 187  Q
    |||||||||||||||| || |||||||||  |||| |||||||||| | ||   ||||| |||||||||||  ||| |||||||||||||| || |||||    
T  21970713 gggaacttctacggtacac-tcataaattctggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttattt 21970615  T
Q  188 gtc 190  Q
    |||    
T  21970614 gtc 21970612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 3953954 - 3954023
Alignment:
Q  142 ataaatgtataaattaacattcattttatgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    |||||| |||||||||||| | ||||||| ||||||  || ||||||||| |  ||||||||||||||||    
T  3953954 ataaatttataaattaacaattattttataaaataagtagttatttgtcaatgtttatattttagaaaac 3954023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 29638789 - 29638862
Alignment:
Q  144 aaatgtataaattaacattcatttta-tgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    |||| |||||||||| | ||| |||| |||||||||||| |||||| || || |||||||||||||||| ||||    
T  29638789 aaatatataaattaaaaatcactttaatgaaataaaaaggtatttgccaatatttatattttagaaaacatcat 29638862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 24251373 - 24251329
Alignment:
Q  143 taaatgtataaattaacattcattttatgaaataaaaagctattt 187  Q
    ||||| |||||||||||| |||||||||||||||||  |||||||    
T  24251373 taaatctataaattaacaatcattttatgaaataaagtgctattt 24251329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 1220 - 1344
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||| ||||||||||||| |||| ||||| ||||  |||||| ||||||||||   | ||||||||||||||   | ||||||||||||    
T  1220 ttctacggtacaccttataaattgaggtgtaccgatactc-tgcttcataaatttataaattaatgattattttatgaaataagttgttatttgtcatta 1318  T
Q  195 attatattttagaaaacttcatctca 220  Q
     ||||||||||||||||  |||||||    
T  1319 tttatattttagaaaacaccatctca 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 47578 - 47702
Alignment:
Q  92 aacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtca 191  Q
    |||||||| |||| |||||| ||||| | ||| |||||||||| || || |||||  |||||||||||   | ||||||||||||||||  |||||||||    
T  47578 aacttctatggtatacctcacaaattaaagtgtaccggtactcttgttccataaaattataaattaacggccgttttatgaaataaaaatatatttgtca 47677  T
Q  192 ttaattatattttagaaaacttcat 216  Q
     || |||||||||| ||||| ||||    
T  47678 atatttatattttaaaaaacatcat 47702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 214546 - 214430
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttg 188  Q
    |||||||||||||||| ||||||||||||||  || |||||||||||||||  | | || || || |||||  | ||||||||||||||| || |||||     
T  214546 gggaacttctacggtacacctcataaattgaattgtaccggtactcctgcttcaaatatttacaatttaacgattattttatgaaataaagagttattta 214447  T
Q  189 tcattaattatatttta 205  Q
    ||| || ||||||||||    
T  214446 tcaatatttatatttta 214430  T

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Target: scaffold0667 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 239 - 122
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt--atgaaataaaaagctatt 186  Q
    |||||||||||||||| || ||| ||| ||||||| ||||||||| |||||  |||| | |||||||||||  |||||||  ||| |||||| |||||||    
T  239 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 141  T
Q  187 tgtcattaattatatttta 205  Q
    ||||| || ||||||||||    
T  140 tgtcaatatttatatttta 122  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 41790 - 41666
Alignment:
Q  95 ttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcattttatgaaataaaaagctatttgtcatta 194  Q
    |||||||||| |||||||||||||||||| | || ||||||   || |||||| ||||||||||   ||||||| ||||||||   | ||||| ||||||    
T  41790 ttctacggtacacctcataaattgaggtgtatcgatactccacttc-ataaatttataaattaatgatcattttttgaaataagttgttatttatcatta 41692  T
Q  195 attatattttagaaaacttcatctca 220  Q
     ||||||||||||||||  |||||||    
T  41691 tttatattttagaaaacaccatctca 41666  T

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Target: scaffold0271 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 17067 - 16988
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaacattcatttt 168  Q
    |||||||||||||||| |||||| ||||||||||| |||| ||||||| ||  |||||| ||| |||||||  |||||||    
T  17067 gggaacttctacggtacacctcacaaattgaggtgtaccgatactcctacttcataaatttatcaattaacgatcatttt 16988  T

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Target: scaffold0721 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 6585 - 6714
Alignment:
Q  89 gggaacttctacggtaaacctcataaa-ttgaggtgcaccggtactcctgc-tctataaatgtataaattaacattcattttatgaaataaaaagctatt 186  Q
    |||||||||||||||| | |||||||| |||||||||| |||||||||||| || | ||||  |||| |||| | ||||||||| ||||||| || ||||    
T  6585 gggaacttctacggtacatctcataaaattgaggtgcatcggtactcctgcttcaaaaaattgataatttaaaaatcattttataaaataaagagttatt 6684  T
Q  187 tgtcattaattatattttagaaaacttcat 216  Q
    | ||| || || |||| || ||||| ||||    
T  6685 tatcaatatttgtattatataaaacatcat 6714  T

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Target: scaffold0493 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 1713 - 1666
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  1713 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 1666  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 8507 - 8554
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  8507 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 8554  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 166500 - 166547
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaacttcat 216  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||    
T  166500 atgaaataaaaaggtatttgtcaatatttatattttagaaaacatcat 166547  T

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Target: scaffold0923 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 91 - 22
Alignment:
Q  89 gggaacttctacggtaaacctcataaattgaggtgcaccggtactcctgctctataaatgtataaattaac 159  Q
    |||||||||||||||| || ||| ||| ||||||| |||||||||||||||  |||| | |||||||||||    
T  91 gggaacttctacggtacac-tcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaac 22  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 291949 - 291907
Alignment:
Q  169 atgaaataaaaagctatttgtcattaattatattttagaaaac 211  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  291949 atgaaataaaaaggtatttgtcaatatttatattttagaaaac 291907  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 271010 - 271083
Alignment:
Q  130 tactcctgctctataaatgtataaattaacattcatttt-atgaaataaaaagctatttgtcattaattatatt 202  Q
    ||||| |||| ||||||| |||||||||||  ||||||| |||||||||| || ||||||||| || |||||||    
T  271010 tactcttgctttataaatttataaattaacgatcatttttatgaaataaagagttatttgtcaatatttatatt 271083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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