View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2332_low_33 (Length: 279)
Name: NF2332_low_33
Description: NF2332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2332_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 38911696 - 38911436
Alignment:
| Q |
1 |
agtagagtcactcttaaatcaatcctatctcaccttcaaaaatgagaagtttaagaagtgagattatatatatttttcttgatagttagaattgtttgat |
100 |
Q |
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| T |
38911696 |
agtagagtcactcttaaatcaatcctatctcaccttcaaaaatgtgaagtttaagaagtgagataatatatatttttcttgatagttagaattgtttgat |
38911597 |
T |
|
| Q |
101 |
agagcatcaaattctaccaaacaattcaaactataaatgtagacacatgatagtttataacatatagaatatattatcgtgttagacaaccaaacaacaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
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| T |
38911596 |
agagcatcaaattctaccaaacaattcaaactataaacgtagacacatgatagtttatagcatatagaatacattatcgtgttagacaaccaaacaacaa |
38911497 |
T |
|
| Q |
201 |
acatattgcaagtacgataatttttaaaatctca-aaaacatttcaatagaatacgaaatg |
260 |
Q |
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||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
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| T |
38911496 |
acatattgcaagtacgatagtttttaaaatctcaaaaaacatttcaatagaatacgaaatg |
38911436 |
T |
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