View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2685-Insertion-1 (Length: 922)

Name: NF2685-Insertion-1
Description: NF2685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2685-Insertion-1
NF2685-Insertion-1
[»] scaffold0015 (4 HSPs)
scaffold0015 (441-739)||(15796-16087)
scaffold0015 (245-370)||(16164-16290)
scaffold0015 (118-185)||(16481-16548)
scaffold0015 (8-82)||(16546-16619)
[»] scaffold0575 (2 HSPs)
scaffold0575 (739-918)||(7909-8090)
scaffold0575 (768-905)||(699-837)
[»] chr6 (24 HSPs)
chr6 (741-918)||(29264825-29265004)
chr6 (741-918)||(22345926-22346103)
chr6 (741-918)||(21469042-21469221)
chr6 (741-868)||(21475643-21475770)
chr6 (741-913)||(25748857-25749032)
chr6 (744-905)||(18136816-18136980)
chr6 (741-913)||(16886299-16886474)
chr6 (741-860)||(25749075-25749193)
chr6 (741-855)||(24412970-24413086)
chr6 (741-860)||(22799186-22799306)
chr6 (783-869)||(15687247-15687334)
chr6 (740-869)||(21680451-21680592)
chr6 (740-858)||(1638389-1638505)
chr6 (815-869)||(2288963-2289018)
chr6 (815-869)||(8521878-8521933)
chr6 (815-869)||(22591007-22591062)
chr6 (743-860)||(23104572-23104690)
chr6 (740-858)||(1641416-1641532)
chr6 (741-860)||(17413395-17413516)
chr6 (833-869)||(22586195-22586231)
chr6 (741-859)||(19445130-19445246)
chr6 (741-860)||(24440227-24440344)
chr6 (808-857)||(17525736-17525786)
chr6 (779-868)||(25346476-25346565)
[»] scaffold0486 (1 HSPs)
scaffold0486 (740-918)||(2278-2460)
[»] scaffold0371 (2 HSPs)
scaffold0371 (741-918)||(7734-7916)
scaffold0371 (741-860)||(4658-4777)
[»] scaffold0020 (2 HSPs)
scaffold0020 (741-918)||(177244-177426)
scaffold0020 (741-918)||(174789-174970)
[»] scaffold0253 (1 HSPs)
scaffold0253 (746-918)||(4578-4755)
[»] chr7 (37 HSPs)
chr7 (739-918)||(16669182-16669366)
chr7 (739-918)||(17643550-17643734)
chr7 (740-905)||(17065003-17065171)
chr7 (740-916)||(15689219-15689399)
chr7 (740-916)||(15696812-15696992)
chr7 (740-916)||(15703792-15703972)
chr7 (743-871)||(41783795-41783924)
chr7 (741-905)||(23441612-23441778)
chr7 (741-870)||(19144940-19145070)
chr7 (741-870)||(20744339-20744469)
chr7 (741-905)||(21519907-21520074)
chr7 (741-870)||(19151238-19151368)
chr7 (741-870)||(20750637-20750767)
chr7 (739-860)||(16576143-16576265)
chr7 (739-860)||(16589397-16589519)
chr7 (741-869)||(1501427-1501554)
chr7 (815-869)||(41283077-41283132)
chr7 (779-868)||(11308389-11308478)
chr7 (779-868)||(11311697-11311786)
chr7 (779-868)||(12684678-12684767)
chr7 (280-370)||(37061889-37061980)
chr7 (815-869)||(9863155-9863210)
chr7 (815-869)||(13396584-13396639)
chr7 (815-869)||(17506835-17506890)
chr7 (815-869)||(17546324-17546379)
chr7 (809-861)||(14107251-14107305)
chr7 (799-860)||(16074633-16074695)
chr7 (742-860)||(12693986-12694106)
chr7 (783-855)||(12802186-12802259)
chr7 (833-869)||(38413862-38413898)
chr7 (741-860)||(7508304-7508421)
chr7 (815-869)||(13734552-13734607)
chr7 (779-860)||(13773147-13773227)
chr7 (821-870)||(14256461-14256511)
chr7 (821-870)||(14266670-14266720)
chr7 (808-860)||(12202734-12202787)
chr7 (820-860)||(37245039-37245080)
[»] chr3 (26 HSPs)
chr3 (741-861)||(9224-9344)
chr3 (741-916)||(21081889-21082069)
chr3 (741-916)||(12856596-12856776)
chr3 (741-905)||(35984047-35984212)
chr3 (741-869)||(15012705-15012835)
chr3 (740-902)||(42108438-42108603)
chr3 (741-860)||(13341167-13341286)
chr3 (741-841)||(14289695-14289794)
chr3 (741-860)||(24285127-24285248)
chr3 (741-860)||(13037600-13037720)
chr3 (741-860)||(13043965-13044085)
chr3 (779-868)||(46724104-46724193)
chr3 (799-913)||(52339651-52339769)
chr3 (741-860)||(16824421-16824541)
chr3 (741-860)||(15935676-15935796)
chr3 (815-869)||(53223715-53223770)
chr3 (815-857)||(54045875-54045918)
chr3 (741-855)||(15937531-15937646)
chr3 (799-866)||(10990765-10990833)
chr3 (815-857)||(604651-604694)
chr3 (741-860)||(15231453-15231570)
chr3 (741-860)||(15237321-15237438)
chr3 (799-860)||(12201781-12201843)
chr3 (808-860)||(15221704-15221757)
chr3 (794-855)||(19442947-19443007)
chr3 (794-855)||(19445200-19445260)
[»] scaffold1336 (1 HSPs)
scaffold1336 (741-866)||(1496-1623)
[»] scaffold0165 (1 HSPs)
scaffold0165 (741-872)||(17201-17332)
[»] chr5 (19 HSPs)
chr5 (739-918)||(21636709-21636893)
chr5 (741-869)||(17023554-17023682)
chr5 (768-860)||(21494334-21494427)
chr5 (741-860)||(25013017-25013137)
chr5 (741-860)||(21999073-21999190)
chr5 (739-854)||(10034493-10034610)
chr5 (741-860)||(21560146-21560263)
chr5 (741-860)||(21981694-21981811)
chr5 (815-869)||(23670862-23670917)
chr5 (815-869)||(26494844-26494899)
chr5 (783-869)||(27870483-27870570)
chr5 (741-860)||(24278366-24278483)
chr5 (741-860)||(24383730-24383847)
chr5 (815-869)||(26362073-26362128)
chr5 (799-860)||(18818351-18818413)
chr5 (808-868)||(24618387-24618448)
chr5 (808-868)||(24747646-24747707)
chr5 (808-860)||(26705721-26705774)
chr5 (808-860)||(26975454-26975507)
[»] chr8 (16 HSPs)
chr8 (741-905)||(22522524-22522692)
chr8 (741-905)||(15266479-15266646)
chr8 (740-861)||(20021074-20021197)
chr8 (741-870)||(25625422-25625553)
chr8 (748-861)||(19986440-19986554)
chr8 (741-860)||(22435348-22435465)
chr8 (815-866)||(32948958-32949010)
chr8 (815-869)||(17794350-17794405)
chr8 (741-860)||(20384477-20384594)
chr8 (799-860)||(33087553-33087615)
chr8 (779-855)||(39362877-39362953)
chr8 (739-859)||(18025372-18025492)
chr8 (741-860)||(17273429-17273546)
chr8 (741-860)||(20392381-20392498)
chr8 (776-857)||(21414253-21414334)
chr8 (815-859)||(15005555-15005600)
[»] scaffold0069 (4 HSPs)
scaffold0069 (741-905)||(33828-33995)
scaffold0069 (741-905)||(40825-40992)
scaffold0069 (745-905)||(28552-28715)
scaffold0069 (745-905)||(32667-32830)
[»] scaffold0042 (1 HSPs)
scaffold0042 (741-869)||(52858-52986)
[»] scaffold0013 (1 HSPs)
scaffold0013 (741-916)||(843-1023)
[»] scaffold0192 (2 HSPs)
scaffold0192 (741-918)||(20113-20293)
scaffold0192 (741-918)||(30780-30960)
[»] scaffold0028 (1 HSPs)
scaffold0028 (742-871)||(93407-93538)
[»] chr2 (21 HSPs)
chr2 (741-901)||(24683277-24683439)
chr2 (741-869)||(23147915-23148044)
chr2 (741-869)||(23559705-23559834)
chr2 (741-860)||(24527978-24528098)
chr2 (741-855)||(20914998-20915113)
chr2 (799-869)||(28351816-28351887)
chr2 (815-869)||(37378468-37378523)
chr2 (741-869)||(21242775-21242902)
chr2 (815-869)||(21240225-21240280)
chr2 (815-869)||(23340294-23340349)
chr2 (815-869)||(31502526-31502581)
chr2 (815-869)||(31505092-31505147)
chr2 (741-855)||(20354060-20354172)
chr2 (808-869)||(28347989-28348051)
chr2 (741-782)||(22840323-22840364)
chr2 (808-859)||(10040973-10041025)
chr2 (741-856)||(31517590-31517704)
chr2 (815-857)||(12628808-12628851)
chr2 (821-870)||(21124603-21124654)
chr2 (799-902)||(22859748-22859854)
chr2 (740-858)||(23079225-23079341)
[»] chr4 (26 HSPs)
chr4 (739-905)||(29856105-29856275)
chr4 (740-853)||(15311879-15311994)
chr4 (741-905)||(15074596-15074765)
chr4 (740-869)||(15722645-15722773)
chr4 (741-857)||(16372518-16372632)
chr4 (741-843)||(16483992-16484095)
chr4 (741-785)||(20594738-20594782)
chr4 (737-868)||(22726563-22726693)
chr4 (799-869)||(41790623-41790695)
chr4 (815-869)||(16279352-16279407)
chr4 (815-857)||(27026891-27026934)
chr4 (815-869)||(28384283-28384338)
chr4 (815-869)||(33847845-33847900)
chr4 (666-729)||(47719246-47719308)
chr4 (666-729)||(47854775-47854837)
chr4 (815-869)||(53388720-53388775)
chr4 (741-860)||(14992295-14992417)
chr4 (741-860)||(30237130-30237252)
chr4 (815-869)||(1103605-1103660)
chr4 (815-857)||(6510737-6510780)
chr4 (815-869)||(15281145-15281200)
chr4 (815-860)||(13876995-13877041)
chr4 (849-916)||(15317292-15317362)
chr4 (799-860)||(18260736-18260798)
chr4 (799-860)||(18270699-18270761)
chr4 (800-860)||(15005642-15005703)
[»] scaffold1979 (1 HSPs)
scaffold1979 (739-918)||(422-606)
[»] scaffold0004 (3 HSPs)
scaffold0004 (741-905)||(382802-382970)
scaffold0004 (741-905)||(383424-383591)
scaffold0004 (740-854)||(58486-58598)
[»] scaffold0956 (1 HSPs)
scaffold0956 (741-901)||(3181-3342)
[»] chr1 (22 HSPs)
chr1 (741-860)||(5380020-5380141)
chr1 (752-905)||(24474676-24474834)
chr1 (765-905)||(21746377-21746520)
chr1 (775-859)||(16398063-16398149)
chr1 (741-843)||(21738039-21738142)
chr1 (741-860)||(18822790-18822907)
chr1 (775-859)||(16399918-16400004)
chr1 (801-868)||(11810430-11810498)
chr1 (815-869)||(295543-295598)
chr1 (815-869)||(21107961-21108016)
chr1 (741-860)||(20087162-20087283)
chr1 (800-870)||(7793439-7793511)
chr1 (741-860)||(23630340-23630462)
chr1 (741-860)||(23711859-23711981)
chr1 (833-905)||(21987628-21987703)
chr1 (819-857)||(24086542-24086581)
chr1 (815-869)||(37357580-37357635)
chr1 (819-913)||(293094-293192)
chr1 (799-860)||(31928080-31928142)
chr1 (800-860)||(11141674-11141735)
chr1 (779-859)||(13529696-13529775)
chr1 (800-860)||(21697583-21697644)
[»] scaffold1098 (1 HSPs)
scaffold1098 (741-868)||(1211-1338)
[»] scaffold0026 (3 HSPs)
scaffold0026 (741-868)||(24027-24154)
scaffold0026 (741-868)||(52919-53046)
scaffold0026 (740-870)||(117428-117559)
[»] scaffold0395 (3 HSPs)
scaffold0395 (741-871)||(10621-10753)
scaffold0395 (815-857)||(9698-9741)
scaffold0395 (800-860)||(4766-4827)
[»] scaffold0053 (2 HSPs)
scaffold0053 (741-870)||(61675-61808)
scaffold0053 (741-870)||(73563-73696)
[»] scaffold0462 (1 HSPs)
scaffold0462 (739-905)||(9943-10113)
[»] scaffold0178 (2 HSPs)
scaffold0178 (752-860)||(25227-25337)
scaffold0178 (752-860)||(30729-30839)
[»] scaffold0669 (1 HSPs)
scaffold0669 (766-905)||(2363-2502)
[»] scaffold0490 (1 HSPs)
scaffold0490 (741-870)||(4102-4233)
[»] scaffold0201 (2 HSPs)
scaffold0201 (741-855)||(31267-31382)
scaffold0201 (741-860)||(25613-25733)
[»] scaffold0054 (1 HSPs)
scaffold0054 (741-860)||(62455-62576)
[»] scaffold1056 (1 HSPs)
scaffold1056 (741-860)||(2982-3103)
[»] scaffold0003 (2 HSPs)
scaffold0003 (741-860)||(81946-82067)
scaffold0003 (741-860)||(91141-91262)
[»] scaffold0309 (1 HSPs)
scaffold0309 (741-870)||(5277-5408)
[»] scaffold0859 (1 HSPs)
scaffold0859 (741-860)||(836-953)
[»] scaffold0107 (1 HSPs)
scaffold0107 (798-913)||(2070-2189)
[»] scaffold0244 (2 HSPs)
scaffold0244 (741-860)||(20027-20147)
scaffold0244 (752-860)||(8920-9029)
[»] scaffold0130 (1 HSPs)
scaffold0130 (741-860)||(12058-12178)
[»] scaffold0324 (1 HSPs)
scaffold0324 (741-855)||(7791-7906)
[»] scaffold0039 (1 HSPs)
scaffold0039 (768-860)||(4395-4488)
[»] scaffold0149 (2 HSPs)
scaffold0149 (740-860)||(12302-12424)
scaffold0149 (741-860)||(28698-28817)
[»] scaffold0058 (1 HSPs)
scaffold0058 (768-870)||(41135-41239)
[»] scaffold1885 (1 HSPs)
scaffold1885 (815-869)||(1123-1178)
[»] scaffold0525 (1 HSPs)
scaffold0525 (815-869)||(8043-8098)
[»] scaffold0447 (1 HSPs)
scaffold0447 (808-862)||(13216-13271)
[»] scaffold0383 (1 HSPs)
scaffold0383 (808-862)||(11211-11266)
[»] scaffold0023 (1 HSPs)
scaffold0023 (741-857)||(157841-157955)
[»] scaffold1711 (1 HSPs)
scaffold1711 (800-855)||(2-58)
[»] scaffold0635 (1 HSPs)
scaffold0635 (808-859)||(6045-6097)
[»] scaffold0326 (2 HSPs)
scaffold0326 (741-860)||(6085-6207)
scaffold0326 (741-860)||(13987-14109)
[»] scaffold0104 (1 HSPs)
scaffold0104 (776-855)||(42343-42423)
[»] scaffold0211 (1 HSPs)
scaffold0211 (799-861)||(8777-8840)
[»] scaffold0094 (1 HSPs)
scaffold0094 (815-869)||(43878-43933)
[»] scaffold0078 (1 HSPs)
scaffold0078 (799-861)||(18095-18158)
[»] scaffold0008 (1 HSPs)
scaffold0008 (821-870)||(125637-125687)
[»] scaffold0007 (1 HSPs)
scaffold0007 (741-855)||(208236-208351)
[»] scaffold0609 (1 HSPs)
scaffold0609 (815-859)||(8887-8932)
[»] scaffold0081 (1 HSPs)
scaffold0081 (799-855)||(56603-56660)
[»] scaffold0025 (1 HSPs)
scaffold0025 (799-855)||(76166-76223)
[»] scaffold0016 (1 HSPs)
scaffold0016 (808-857)||(198544-198593)


Alignment Details
Target: scaffold0015 (Bit Score: 202; Significance: 1e-110; HSPs: 4)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 441 - 739
Target Start/End: Complemental strand, 16087 - 15796
Alignment:
Q  441 gcagcagaaacagagaagataaaatgaactgtgagctgtgaatataggagagaggttgagagaaagaaactatttaaaggaatgagattagggtttggaa 540  Q
    |||||||||||||||||||||||||||||||||| |       ||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  16087 gcagcagaaacagagaagataaaatgaactgtgaac-------ataggagggtggttgagcgaacgaaactatttaaaggaatgagattagggtttggaa 15995  T
Q  541 tggtgtacgtgtattctcaattctacccttgcttgttatctcaaagcccaatgatattttgggcatagttttgtttacaggcctccctcttt-ccccatg 639  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||||||||| ||||||||||| |||||||    
T  15994 tggtgtatgtgtattctcaattctacccttacttgttatcttaaagcccaatgatattttgggcctaattttgtttacagccctccctctttcccccatg 15895  T
Q  640 aggtttgaacatttctttatcagccccccaaaaatcttttatgccccttgaattttttcaatttgcccttaattcaagagttttgtatgtatctaccgga 739  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15894 aggtttgaacatttctttatcagccccccaaaaatcttttatgccccgtgaa-tttttcaatttgccctaaattcaagagttttgtatgtatctatcgga 15796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 245 - 370
Target Start/End: Complemental strand, 16290 - 16164
Alignment:
Q  245 aagatctagaaggcgatgaaataaaagagaga-aaaaaccatcagaaatataggattaatgcatcaagtgaatctcagacgaccgtcgtgagtattgaaa 343  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16290 aagatctagaaggcgaagaaataaaatagagagaaaaaccatcagaaatataggattaatgcatcaagtgaatctcagacgaccgtcgtgagtattgaaa 16191  T
Q  344 atccaaattcatcatatggttttcaat 370  Q
    |||||||||||||||||||||||||||    
T  16190 atccaaattcatcatatggttttcaat 16164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 16548 - 16481
Alignment:
Q  118 atggtttgtttcaatctaatggagggaggatccgtgcctttcaacgaatcataaacgtgtgttcaaaa 185  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  16548 atggtttgtttcaatctaatagagggaggatccatgcctttcaacgaatcataaacgtgtgttaaaaa 16481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 16619 - 16546
Alignment:
Q  8 gtcacctcaattctccgctactttgactagaccacactagtagcttcttttttccattaaccatatctaacaatg 82  Q
    ||||||||| |||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16619 gtcacctcacttctccgctgttttgactagaccacac-agtagcttcttttttccattaaccatatctaacaatg 16546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 134; Significance: 3e-69; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 739 - 918
Target Start/End: Original strand, 7909 - 8090
Alignment:
Q  739 actgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaata 838  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  7909 actgtaacaccccgttatcccaacaattaaatattaaataaaataatcagggttcaacaacaaacgggcatgtcacactgcttttcaaaatttctaaata 8008  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    |||||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  8009 gaataaaatactatttattaaaatcaacttaatagttaaatcaatactttgcagcggaatatttttcaatcatttaacatca 8090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 768 - 905
Target Start/End: Complemental strand, 837 - 699
Alignment:
Q  768 aatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaac 866  Q
    |||| |||||||||||||||||| |||||||||| |||| |||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  837 aataataaataaaataatcagagttcaacaacaa-cgggcatgtcacactttttttcaaaatttcttaaatagaataaaatactatttattaaaatcaac 739  T
Q  867 tttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    || | ||||||| ||||||||| |||| ||||||||||||    
T  738 ttaatagttaaaccaatactttacagcggaatatttttca 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 1e-65; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 29264825 - 29265004
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29264825 tgtaacactttgttatcctaacaattaaatattaaataaaataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttctaaataga 29264924  T
Q  841 ataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    |||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  29264925 ataaaatactatttattaaaatcaacttaatagttaaaccaatactttgcagcggaatatttttcaatcatttaacatca 29265004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 22345926 - 22346103
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| ||  ||||||||||||||||||||||    
T  22345926 tgtaacaccccgttatcccaacaattaaatattaaataaaataatcagagttcaacaacaa-cgggcatgtcacacaacttttcaaaatttctaaataga 22346024  T
Q  841 ataaaatactatttattaaaatcaactttaaagttaaacaatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    |||||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| || ||||||||||||||    
T  22346025 ataaaatactatttattaaaatcaacttaatagttaaccaatactttgcagcggaatatttctcaatcatttaacatca 22346103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 21469042 - 21469221
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  21469042 tgtaacaccccgttatcccaacaataaaatattaagtaaaataatcagagttcaacaacaaacggacatgtcacactgcttttcaaaatttctaaataga 21469141  T
Q  841 ataaaatactatttattaaaatcaactttaaag-ttaaacaatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||| |||||||||||||||||||| | || |||| ||| |||||||||| ||||||||||| ||||| ||||||||    
T  21469142 ataaaatgctatttattaaaatcaacttaatagtttaaccaaaactttgcagcggaatatttttcaatcatataacatca 21469221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 741 - 868
Target Start/End: Original strand, 21475643 - 21475770
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  21475643 tgtaacaccctgttatcccaacaataaaatattaagtaaaataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttctaaataga 21475742  T
Q  841 ataaaatactatttattaaaatcaactt 868  Q
    ||||||| ||||||||||||||||||||    
T  21475743 ataaaatgctatttattaaaatcaactt 21475770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 741 - 913
Target Start/End: Original strand, 25748857 - 25749032
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgct-tttcaaaatttctaaatag 839  Q
    |||||||||| |||||||||| ||||| |||  ||||||||||||||||| ||||||||| ||||| |||||| |||||| ||||||||||| |||||||    
T  25748857 tgtaacaccccgttatcccaataattacataacaaataaaataatcagagttcaacaacatacgggcatgtcacactgctatttcaaaatttttaaatag 25748956  T
Q  840 aataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttc-atcatttaa 913  Q
    ||||||||||||||||||||||||||| | | ||||||| |||||||||||||| ||||||||||| |||||||||    
T  25748957 aataaaatactatttattaaaatcaacataatagttaaaccaatactttgcagcggaatatttttcaatcatttaa 25749032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 744 - 905
Target Start/End: Original strand, 18136816 - 18136980
Alignment:
Q  744 aacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaat 842  Q
    ||||||| ||||||||||||| |||||||| ||||||  |||||||| ||||||| ||||||| |||||| |||||||||||||||||| ||||||||||    
T  18136816 aacaccccgttatcccaacaagtaaatatttaataaataaatcagagttcaacaataaacgggaatgtcacactgcttttcaaaatttcttaaatagaat 18136915  T
Q  843 aaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||| ||||| ||||||||||||||| | || |||| |||||||||||||| ||||||||||||    
T  18136916 aaaatgctattcattaaaatcaactttgatagataaaccaatactttgcagcggaatatttttca 18136980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 741 - 913
Target Start/End: Complemental strand, 16886474 - 16886299
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||| ||| ||||||    
T  16886474 tgtaacaccccgttatcccaacaagtaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactgcttttcaaaaattcttaaata 16886375  T
Q  839 gaataaaatactatttattaaaatcaacttt--aaagttaaacaatactttgcagcagaatatttttc-atcatttaa 913  Q
    ||||||||| |||||||||  ||||||||||   || |  | |||||||| ||||||||||||||||| |||||||||    
T  16886374 gaataaaatgctatttatt--aatcaactttgataaatatatcaatacttcgcagcagaatatttttcaatcatttaa 16886299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 25749075 - 25749193
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||| |||| ||||||||||||||| |||||||||| |||| || |||||||| |||||| |||||| ||| |||||||||||||| |||||||    
T  25749075 tgtaacaccccgttaacccaacaattaaataataaataaaat-atcaaagttcaacaac-aacgggcatgtcacactacttttcaaaatttcttaaatag 25749172  T
Q  840 aataaaatactatttattaaa 860  Q
    |||||||||||||||| ||||    
T  25749173 aataaaatactatttaataaa 25749193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 24413086 - 24412970
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| |||| |||||  ||||||| || |||||||||||||||||| ||| |||  |||||| |||||| ||| |||||||||||||| |||||    
T  24413086 tgtaacaccccgttaacccaaaacaattaa-taataaataaaataatcagagttcatcaaacaacgggcatgtcacactacttttcaaaatttcttaaat 24412988  T
Q  838 agaataaaatactattta 855  Q
    |||||| || ||||||||    
T  24412987 agaatataaaactattta 24412970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 22799306 - 22799186
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | |||||| | || | |||||||| |||||| ||| |||||||||||||| ||||||    
T  22799306 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtttaataccaaacgggcatgtcacactacttttcaaaatttcttaaata 22799208  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  22799207 gaatataaaactatttaataaa 22799186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 783 - 869
Target Start/End: Complemental strand, 15687334 - 15687247
Alignment:
Q  783 aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||| | |||| | ||||||||||  | |||||||||||||| | | ||||||||||||||||||| |||||||||||||||||    
T  15687334 aatcagagtttaacacctaacgggtatgctacactgcttttcaaaaatccataaatagaataaaatactaattattaaaatcaacttt 15687247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 740 - 869
Target Start/End: Complemental strand, 21680592 - 21680451
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaa---at-----aatcagagctcaacaa-caaacgggtatgtcagactgcttttcaaaatt 830  Q
    ||||||||||| |||||||||| |  |||||||||||||||   ||     |||||||| ||||||| |||||||| |||||| ||||||||||||||||    
T  21680592 ctgtaacaccccgttatcccaatagctaaatattaaataaataaatcaagaaatcagagttcaacaatcaaacgggaatgtcacactgcttttcaaaatt 21680493  T
Q  831 tc-taaatagaata-aaatactattta-ttaaaatcaacttt 869  Q
    || ||||||||| | |||| ||||||| ||||||||||||||    
T  21680492 tcttaaatagaaaataaatgctatttatttaaaatcaacttt 21680451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 740 - 858
Target Start/End: Original strand, 1638389 - 1638505
Alignment:
Q  740 ctgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | ||||||||||  |||||| ||| |||||||||| | | |||||    
T  1638389 ctgtaacaccccgttaacccaacaacgtaaatattaaataaaat---cagagttaatcaacaaacgga-atgtcacacttcttttcaaaaatccataaat 1638484  T
Q  838 agaataaaatactatttatta 858  Q
    |||||||||||||||||||||    
T  1638485 agaataaaatactatttatta 1638505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 2289018 - 2288963
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  2289018 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 2288963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 8521878 - 8521933
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  8521878 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 8521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 22591007 - 22591062
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  22591007 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 22591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 743 - 860
Target Start/End: Original strand, 23104572 - 23104690
Alignment:
Q  743 taacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaataga 840  Q
    |||||||  |||||||||| |||||||||| ||||||| | | |||||| | |||| |||||||  |||||| ||| |||||||||||||| ||||||||    
T  23104572 taacacctcgttatcccaaacaattaaataataaataataca-tcagagtttaacatcaaacggacatgtcacactacttttcaaaatttcataaataga 23104670  T
Q  841 ataaaatactatttattaaa 860  Q
    ||| || |||||||| ||||    
T  23104671 atataaaactatttaataaa 23104690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 858
Target Start/End: Original strand, 1641416 - 1641532
Alignment:
Q  740 ctgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | |||||||| |  |||||| ||| |||||||||| | | |||||    
T  1641416 ctgtaacaccccgttaacccaacaacgtaaatattaaataaaat---cagagttaatcaacaaacaga-atgtcacacttcttttcaaaaatccataaat 1641511  T
Q  838 agaataaaatactatttatta 858  Q
    |||||||||||||||||||||    
T  1641512 agaataaaatactatttatta 1641532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 17413395 - 17413516
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| ||||||||||  |||||||||| ||||| ||   ||||||| | |||| | |||||||||||||| ||| |||||||||||||| ||||    
T  17413395 tgtaacaccccgttatcccaaagcaattaaataataaattaac--atcagagtttaacaccgaaacgggtatgtcacactacttttcaaaatttcttaaa 17413492  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || | |||||| ||||    
T  17413493 tagaatataaaattatttaataaa 17413516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 833 - 869
Target Start/End: Original strand, 22586195 - 22586231
Alignment:
Q  833 taaatagaataaaatactatttattaaaatcaacttt 869  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22586195 taaatagaataaagtactatttattaaaatcaacttt 22586231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 859
Target Start/End: Complemental strand, 19445246 - 19445130
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||||||| ||||||||   |||| || | | |||||||||||| | | ||||||||||  |||||| ||| |||||||||| | | |||||||    
T  19445246 tgtaacaccctgttttcccaacatcaaaat-ttcatttaaataatcagag-taatcaacaaacgga-atgtcacactacttttcaaaaatccataaatag 19445150  T
Q  840 aataaaatactatttattaa 859  Q
    ||||||||||||||||||||    
T  19445149 aataaaatactatttattaa 19445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 24440227 - 24440344
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||  ||||||||||   ||||| | | ||||||||||  |||||| ||| |||||||||| ||| ||||||    
T  24440227 tgtaacaccccgttaacccaacaacgtaaatgataaataaaat---cagagttaatcaacaaacgga-atgtcacactacttttcaaaaattcataaata 24440322  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  24440323 gaataaaatgctatttattaaa 24440344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 808 - 857
Target Start/End: Original strand, 17525736 - 17525786
Alignment:
Q  808 atgtcagactgcttttcaaaatttc-taaatagaataaaatactatttatt 857  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||||||||    
T  17525736 atgtcacactgcttttcaaaaattcataaatagaataaaatgctatttatt 17525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 779 - 868
Target Start/End: Original strand, 25346476 - 25346565
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||||||||| | |||| | |||| | |||||| ||| |||| |||||||||| |||||||||||||||||||||| | ||| ||||||    
T  25346476 aaataatcagagttaaaca-cgaacgagcatgtcacactactttacaaaatttcttaaatagaataaaatactatttaattaaaacaactt 25346565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 119; Significance: 3e-60; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 740 - 918
Target Start/End: Original strand, 2278 - 2460
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaattt-ctaaata 838  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||||  ||||||    
T  2278 ctgtaacaccccgttatcccaacaattaaatattaaataaaataatcagagttcaacaacaaacgagaatgtcacactgcttttcaaaatttattaaata 2377  T
Q  839 gaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||| |||||||||    
T  2378 gaataaaatactatttattaaaatcaactttaaaagttaaaccaatactttgcagcggaatatttttcaatcacttaacatca 2460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 111; Significance: 2e-55; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 7916 - 7734
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||| ||||||    
T  7916 tgtaacaccccgttatcccaacaattaaatattaaataaaataatcagagttcaacaaacaaacgggaatgtcacactgcttttcaaaatttcttaaata 7817  T
Q  839 gaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||| |||| |||||||||    
T  7816 gaataaaatacaatttattaaaatcaactttaatagttaaaccaatactttgcagcgaaatatttttcaatcagttaacatca 7734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 4658 - 4777
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaa--tttctaaat 837  Q
    |||||||||| |||| ||||||||  ||| |||||||||||||   |||||   | |||||||  || |||||| ||||||||||||||  ||  |||||    
T  4658 tgtaacaccccgttaacccaacaacgtaattattaaataaaat---cagagtaaatcaacaaaacggaatgtcacactgcttttcaaaaaattcataaat 4754  T
Q  838 agaataaaatactatttattaaa 860  Q
    |||||||||||||||||||||||    
T  4755 agaataaaatactatttattaaa 4777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 103; Significance: 9e-51; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 177244 - 177426
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| |  ||| ||| |||||||||||||| ||||||    
T  177244 tgtaacaccccgttatcccaacaattaaatattaaataaaataatcagagttcatcaaacaaacgggaaaatcacactacttttcaaaatttcttaaata 177343  T
Q  839 gaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||||    
T  177344 gaataaaatactatttattaaaatcaactttaatagttaaaccaatactttgcagcggaatatttttcaatcacttaacatca 177426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 174789 - 174970
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||  ||| | ||||||| || |||||| |||||||||| |  |||| ||||||    
T  174789 tgtaacactccgttatcccaacaattaaatattaaataaaataatcagacttcatcaaacaaac-ggaatgtcacactgcttttccacctttcttaaata 174887  T
Q  839 gaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||||    
T  174888 gaataaaatactatttattaaaatcaactttaatagttaaaccaatactttgcagcggaatatttttcaatcacttaacatca 174970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 102; Significance: 4e-50; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 746 - 918
Target Start/End: Original strand, 4578 - 4755
Alignment:
Q  746 caccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaata 843  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||| |||||||||||    
T  4578 caccccgttatcccaacaattaaatattaaataaaataatcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaatttcttaaatagaata 4677  T
Q  844 aaatactatttattaaaatcaactttaa-ag-ttaaacaatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||  || ||||||||||| |||| |||||||||    
T  4678 aaatactatttattaaaatcaactttaatagtttaaccaatactttgtcgcggaatatttttcaatcacttaacatca 4755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 3e-47; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 739 - 918
Target Start/End: Complemental strand, 16669366 - 16669182
Alignment:
Q  739 actgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaa-tttctaaa 836  Q
    |||| ||||||| |||| |||||||  ||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||| ||| ||||    
T  16669366 actggaacaccccgttagcccaacatgtaaatattaaataaaataatcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaattttttaaa 16669267  T
Q  837 tagaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||||    
T  16669266 tagaataaaattctatttattaaaatcaactttaatagttaaaccaatactttgcagcggaatatttttcaatcacttaacatca 16669182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 739 - 918
Target Start/End: Complemental strand, 17643734 - 17643550
Alignment:
Q  739 actgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaa-tttctaaa 836  Q
    |||| ||||||| |||| |||||||  ||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||| ||| ||||    
T  17643734 actggaacaccccgttagcccaacatgtaaatattaaataaaataatcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaattttttaaa 17643635  T
Q  837 tagaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||||    
T  17643634 tagaataaaattctatttattaaaatcaactttaatagttaaaccaatactttgcagcggaatatttttcaatcacttaacatca 17643550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 740 - 905
Target Start/End: Original strand, 17065003 - 17065171
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||| |||||    
T  17065003 ctgtaacaccccgttatcccaacaactaaatattaaataaaataatcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaatttcttaaat 17065102  T
Q  838 agaataaaatactatttattaaaatcaactt---taaagttaaacaatactttgcagcagaatatttttca 905  Q
     |||||||||||||||||||||||||||| |   |||| |  | |||||||||||||| ||||||||||||    
T  17065103 cgaataaaatactatttattaaaatcaaccttgataaaat--atcaatactttgcagcggaatatttttca 17065171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 740 - 916
Target Start/End: Original strand, 15689219 - 15689399
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaata 838  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||| |||||||||||   ||||||    
T  15689219 ctgtaacaccccgttatcccaacagctaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacttttcaaaatccttaaata 15689318  T
Q  839 gaataaaatactatttatt-aaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    | |||||||  |||||||| |||||||||||| | || |||| |||||||||||||| |||| |||||| ||||||||||||    
T  15689319 g-ataaaatgttatttattaaaaatcaactttgatagataaatcaatactttgcagcggaatgtttttcaatcatttaacat 15689399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 740 - 916
Target Start/End: Original strand, 15696812 - 15696992
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaata 838  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||| |||||||||||   ||||||    
T  15696812 ctgtaacaccccgttatcccaacagctaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacttttcaaaatccttaaata 15696911  T
Q  839 gaataaaatactatttatt-aaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    | |||||||  |||||||| |||||||||||| | || |||| |||||||||||||| |||| |||||| ||||||||||||    
T  15696912 g-ataaaatgttatttattaaaaatcaactttgatagataaatcaatactttgcagcggaatgtttttcaatcatttaacat 15696992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 740 - 916
Target Start/End: Original strand, 15703792 - 15703972
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaata 838  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||| |||||||||||   ||||||    
T  15703792 ctgtaacaccccgttatcccaacagctaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacttttcaaaatccttaaata 15703891  T
Q  839 gaataaaatactatttatt-aaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    | |||||||  |||||||| |||||||||||| | || |||| |||||||||||||| |||| |||||| ||||||||||||    
T  15703892 g-ataaaatgttatttattaaaaatcaactttgatagataaatcaatactttgcagcggaatgtttttcaatcatttaacat 15703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 743 - 871
Target Start/End: Complemental strand, 41783924 - 41783795
Alignment:
Q  743 taacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaa 841  Q
    ||||||||||||||||||||||||||||  | | ||||||||| |||| |||||||  |||||| |||||| |||||||||| ||||||| |||||||||    
T  41783924 taacaccctgttatcccaacaattaaattatcattaaaataattagagttcaacaaacaacgggcatgtcacactgcttttcgaaatttcttaaatagaa 41783825  T
Q  842 taaaatactatttattaaaatcaactttaa 871  Q
    ||||||| |||||| ||||||||| |||||    
T  41783824 taaaatattatttaataaaatcaaatttaa 41783795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 23441612 - 23441778
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttc-aaaatttctaaata 838  Q
    |||||||||| |||| ||||| ||||||| ||  ||||||||||||||||| |||||||   ||||| |||||| |||||||||| ||||||| ||||||    
T  23441612 tgtaacaccccgttaccccaaacaattaa-taaaaaataaaataatcagagttcaacaaacgacgggcatgtcacactgcttttcaaaaatttttaaata 23441710  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||| || ||||||||||||||||||| | | ||||||| ||||| |||||||| ||||||||||||    
T  23441711 gaatataaaactatttattaaaatcaacctaatagttaaaccaataatttgcagcggaatatttttca 23441778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 741 - 870
Target Start/End: Original strand, 19144940 - 19145070
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaata 838  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||| |||||| |||||||||| |||| ||| || ||| ||||||||||||||| |||||    
T  19144940 tgtaacaccccgttaacccaaacaattaaataataaataaaata-tcagagttcaacaacaa-cgggcatgccacactacttttcaaaatttcttaaata 19145037  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||||||||||||| |||| ||||||||||    
T  19145038 gaataaaatactatttaataaacatcaacttta 19145070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 741 - 870
Target Start/End: Original strand, 20744339 - 20744469
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaata 838  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||| |||||| |||||||||| |||| ||| || ||| ||||||||||||||| |||||    
T  20744339 tgtaacaccccgttaacccaaacaattaaataataaataaaata-tcagagttcaacaacaa-cgggcatgccacactacttttcaaaatttcttaaata 20744436  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||||||||||||| |||| ||||||||||    
T  20744437 gaataaaatactatttaataaacatcaacttta 20744469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 741 - 905
Target Start/End: Complemental strand, 21520074 - 21519907
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||| ||||||| ||| ||||||||||||| |||||||| |||||||||||| || ||||||  |||| |||||||||||| ||||||    
T  21520074 tgtaacaccccgttattccaacaactaattattaaataaaataaatcagagttcaacaacaaacaggaatgtcacgctgc-tttcaaaatttcttaaata 21519976  T
Q  839 gaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttca 905  Q
     ||  ||||||| ||||| ||||||||||||   || |||| |||||||||||||| ||||||||||||    
T  21519975 aaaataaatactttttatcaaaatcaactttggtagataaaccaatactttgcagcggaatatttttca 21519907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 870
Target Start/End: Original strand, 19151238 - 19151368
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||| |||||||||| |||||||||| |||| || |||||||| |||||| || ||| ||| |||||||||||||| ||||||    
T  19151238 tgtaacaccccgttaacccaaacaattaaataataaataaaat-atcaaagttcaacaac-aacgggcatttcacactacttttcaaaatttcttaaata 19151335  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    |||||||||| |||||| |||| ||||||||||    
T  19151336 gaataaaatattatttaataaacatcaacttta 19151368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 870
Target Start/End: Original strand, 20750637 - 20750767
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||| |||||||||| |||||||||| |||| || |||||||| |||||| || ||| ||| |||||||||||||| ||||||    
T  20750637 tgtaacaccccgttaacccaaacaattaaataataaataaaat-atcaaagttcaacaac-aacgggcatttcacactacttttcaaaatttcttaaata 20750734  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    |||||||||| |||||| |||| ||||||||||    
T  20750735 gaataaaatattatttaataaacatcaacttta 20750767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 739 - 860
Target Start/End: Complemental strand, 16576265 - 16576143
Alignment:
Q  739 actgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||||| |||||| ||| ||||||| || |||  ||||||||||||| |||||||  |||||| ||| || |||||||||||||||||| ||||    
T  16576265 actgtaacaccccgttatctcaaacaattaa-taataataaaaataatcagagttcaacaaacaacgggcatgacacactgcttttcaaaatttcttaaa 16576167  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  16576166 tagaatataaaactatttaataaa 16576143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 739 - 860
Target Start/End: Original strand, 16589397 - 16589519
Alignment:
Q  739 actgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||||| |||||| ||| ||||||| || |||  ||||||||||||| |||||||  |||||| ||| || |||||||||||||||||| ||||    
T  16589397 actgtaacaccccgttatctcaaacaattaa-taataataaaaataatcagagttcaacaaacaacgggcatgacacactgcttttcaaaatttcttaaa 16589495  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  16589496 tagaatataaaactatttaataaa 16589519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 741 - 869
Target Start/End: Complemental strand, 1501554 - 1501427
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||| |||||||||  ||||||| |||| ||||   ||||| | |||| | |||||| |||  | |||||||||||||| ||| ||||||    
T  1501554 tgtaacaccccgttttcccaacaacataaatataaaattaaat---cagagtttaacacctaacgggcatgctacactgcttttcaaaaattcataaata 1501458  T
Q  839 gaataaaatactatttattaaaatcaacttt 869  Q
    ||||||| |||||||||||||||||||||||    
T  1501457 gaataaagtactatttattaaaatcaacttt 1501427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 41283077 - 41283132
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  41283077 actgcttttcaaaaatccataaatagaataaaatactatttattaaaatcaacttt 41283132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 779 - 868
Target Start/End: Original strand, 11308389 - 11308478
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||||||||| | |||| | |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  11308389 aaataatcagagttaaaca-cgaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 11308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 779 - 868
Target Start/End: Original strand, 11311697 - 11311786
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||||||||| | |||| | |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  11311697 aaataatcagagttaaaca-cgaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 11311786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 779 - 868
Target Start/End: Complemental strand, 12684767 - 12684678
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||||||||| | |||| | |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  12684767 aaataatcagagttaaaca-cgaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 12684678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 370
Target Start/End: Original strand, 37061889 - 37061980
Alignment:
Q  280 aaccatcagaaatataggattaatgcatca-agtgaatctcagacgaccgtcgtgag-tattgaaaatccaaattcatcatatggttttcaat 370  Q
    |||||||||||||||||||||| | ||||| ||| || |||||||||||||||||||  | ||| |||||| |||||||||||||||| ||||    
T  37061889 aaccatcagaaatataggattatttcatcatagttaa-ctcagacgaccgtcgtgagaaaatgacaatccatattcatcatatggtttccaat 37061980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 9863210 - 9863155
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  9863210 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 9863155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 13396639 - 13396584
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  13396639 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 13396584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 17506890 - 17506835
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  17506890 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 17506835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 17546324 - 17546379
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  17546324 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 17546379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 809 - 861
Target Start/End: Complemental strand, 14107305 - 14107251
Alignment:
Q  809 tgtcagactgcttttcaaaatttc-taaatagaat-aaaatactatttattaaaa 861  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14107305 tgtcacactgcttttcaaaatttcttaaatagaatgaaaatactatttattaaaa 14107251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 799 - 860
Target Start/End: Complemental strand, 16074695 - 16074633
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| || |||||||| ||||    
T  16074695 caaacgggcatgtcacactgcttttcaaaatttcttaaatagaatataaaactatttaataaa 16074633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 742 - 860
Target Start/End: Original strand, 12693986 - 12694106
Alignment:
Q  742 gtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    ||||||||| ||||||| || || ||||||| |||||||  |||| |||||| |||| |||| |||| |||||| ||| |||||||||||||| ||||||    
T  12693986 gtaacaccccgttatccaaaacacttaaataataaataat-taattagagcttaacaccaaaacgggcatgtcacactacttttcaaaatttcttaaata 12694084  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  12694085 gaatataaaactatttaataaa 12694106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 783 - 855
Target Start/End: Complemental strand, 12802259 - 12802186
Alignment:
Q  783 aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactattta 855  Q
    |||||||| ||| |||  |||||| |||||| |||||||||||||||||| ||||||||||| || ||||||||    
T  12802259 aatcagagttcatcaaacaacgggcatgtcacactgcttttcaaaatttcttaaatagaatataaaactattta 12802186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 833 - 869
Target Start/End: Complemental strand, 38413898 - 38413862
Alignment:
Q  833 taaatagaataaaatactatttattaaaatcaacttt 869  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38413898 taaatagaataaagtactatttattaaaatcaacttt 38413862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 7508421 - 7508304
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | ||||||||||  |||||| ||||||||| |||| ||| |||||     
T  7508421 tgtaacaccccgttaacccaacaacgtaaatattaaataaaat---cagagttaatcaacaaacgga-atgtcacactgctttttaaaaattcataaatg 7508326  T
Q  839 gaataaaatactatttattaaa 860  Q
    |||||||||  |||||||||||    
T  7508325 gaataaaatgttatttattaaa 7508304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 13734607 - 13734552
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||    
T  13734607 actgcttttcaaaaatccataaatagaataaagtactatttattaaattcaacttt 13734552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 779 - 860
Target Start/End: Original strand, 13773147 - 13773227
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||||||| | | ||||||||||  |||||| |||||||||||||| | | |||||||||||||||| |||||||||||    
T  13773147 aaataatcagag-taatcaacaaacgga-atgtcacactgcttttcaaaaatccataaatagaataaaatattatttattaaa 13773227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 821 - 870
Target Start/End: Complemental strand, 14256511 - 14256461
Alignment:
Q  821 tttcaaaatttctaaatagaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||||||  ||||||||||||||||||||||| |||| ||||||||||    
T  14256511 tttcaaaattcttaaatagaataaaatactatttaataaacatcaacttta 14256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 821 - 870
Target Start/End: Complemental strand, 14266720 - 14266670
Alignment:
Q  821 tttcaaaatttctaaatagaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||||||  ||||||||||||||||||||||| |||| ||||||||||    
T  14266720 tttcaaaattcttaaatagaataaaatactatttaataaacatcaacttta 14266670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 860
Target Start/End: Complemental strand, 12202787 - 12202734
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaa 860  Q
    |||||| |||||||||| ||| |||| |||||||||||||||||||| ||||||    
T  12202787 atgtcacactgcttttcgaaaattcttaaatagaataaaatactattaattaaa 12202734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 820 - 860
Target Start/End: Complemental strand, 37245080 - 37245039
Alignment:
Q  820 ttttcaaaatttctaaatagaata-aaatactatttattaaa 860  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  37245080 ttttcaaaatttctaaatagaatataaaaactatttattaaa 37245039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 3e-47; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 741 - 861
Target Start/End: Original strand, 9224 - 9344
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  9224 tgtaacaccccgttatcccaacaattaaatattaaataaaataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttctaaataga 9323  T
Q  841 ataaaatactatttattaaaa 861  Q
    ||||| ||||||||| |||||    
T  9324 ataaattactatttaataaaa 9344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 741 - 916
Target Start/End: Complemental strand, 21082069 - 21081889
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| |||||||  ||||||||||||||||||| |||||| ||||||||||| ||| |||||| |||||||||||||||||| ||||||    
T  21082069 tgtaacaccccgttaacccaacagctaaatattaaataaaataaatcagagttcaacaacaaatgggaatgtcacactgcttttcaaaatttcttaaata 21081970  T
Q  839 gaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    ||||||||| |||| |||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||| |||||||    
T  21081969 gaataaaatgctatatattaaaatcaactttaatagataaatcaatactttgcagcggaatatttttcgatcacttaacat 21081889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 741 - 916
Target Start/End: Complemental strand, 12856776 - 12856596
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaata 838  Q
    |||||||||| |||| |||||||| |||||||| |||||||||| | |||| ||||||||||||  | |||||| ||||||||||||||||||| |||||    
T  12856776 tgtaacaccccgttaacccaacaactaaatattcaataaaataaattagagttcaacaacaaacaagaatgtcacactgcttttcaaaatttcttaaata 12856677  T
Q  839 gaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    ||||||||| |||| |||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||| |||||||    
T  12856676 gaataaaatgctatatattaaaatcaactttaagagataaatcaatactttgcagcggaatatttttcgatcacttaacat 12856596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 35984047 - 35984212
Alignment:
Q  741 tgtaacaccctgttatcccaaca--attaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaata 838  Q
    |||||||||| |||||||||| |  |||||||| |||||||||||||||||| | |||||||| || | |||||| ||||||||||||||||||||||||    
T  35984047 tgtaacaccccgttatcccaaaactattaaataataaataaaataatcagagtttaacaacaa-cgagcatgtcacactgcttttcaaaatttctaaata 35984145  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||||||||||||||| | |||||||||| | ||||||| ||||| |||||||| ||||||||||||    
T  35984146 gaataaaatactatttaat-aaatcaacttaatagttaaaccaataatttgcagcggaatatttttca 35984212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 741 - 869
Target Start/End: Complemental strand, 15012835 - 15012705
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttct-aaat 837  Q
    |||||||||| ||||||||||||  ||| ||||||||||||||| |||||| |||||| | ||||||| |||||| ||||||||||||||||||| ||||    
T  15012835 tgtaacaccccgttatcccaacagctaa-tattaaataaaataaatcagagttcaacagccaaacgggaatgtcacactgcttttcaaaatttcttaaat 15012737  T
Q  838 agaataaaatactatttattaaaatcaacttt 869  Q
    ||||||||||||||||||||| ||||||||||    
T  15012736 agaataaaatactatttattagaatcaacttt 15012705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 902
Target Start/End: Original strand, 42108438 - 42108603
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttctaaata 838  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | | || | ||| ||| |||  | ||||||||||||||||  ||||||    
T  42108438 ctgtaacaccctgttatcccaacaattaaatattaaataaaat-atcagagtttatcaccaaaatgggcatgctacactgcttttcaaaattcttaaata 42108536  T
Q  839 gaataaaatactattt-attaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttt 902  Q
    |||||||||||||||| | ||| ||||||||||| ||||||| ||||| ||||| ||| ||||||||    
T  42108537 gaataaaatactatttaaataacatcaactttaatagttaaaccaataatttgccgcataatatttt 42108603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 13341167 - 13341286
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||| ||||||||||||||||| || ||||||| |||||||||| ||  | |||||| || |||||| |||||||||||||||||| |||||||    
T  13341167 tgtaacaccccgttatcccaacaattaa-taataaataagataatcagagttcctccacaaacaggcatgtcacactgcttttcaaaatttcttaaatag 13341265  T
Q  840 aataaaatactatttattaaa 860  Q
    ||  |||||||||||| ||||    
T  13341266 aaataaatactatttaataaa 13341286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 741 - 841
Target Start/End: Complemental strand, 14289794 - 14289695
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaatag 839  Q
    |||||||| | |||||||||| |||||||||| |||||||||||||||||| |||||||| |||||| |||||| |||||||||| |||| |||||||||    
T  14289794 tgtaacacaccgttatcccaaacaattaaataataaataaaataatcagagttcaacaac-aacgggaatgtcacactgcttttc-aaatctctaaatag 14289697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 24285248 - 24285127
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| |||| |||||  ||||||| || |||||||||||||||||| ||| |||  |||||| |||||| |||||||||||||||||| |||||    
T  24285248 tgtaacaccccgttaacccaaaacaattaa-taataaataaaataatcagagttcatcaaacaacgggcatgtcacactgcttttcaaaatttcttaaat 24285150  T
Q  838 agaataaaatactatttattaaa 860  Q
    |||||| || |||||||| ||||    
T  24285149 agaatataaaactatttaataaa 24285127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 13037720 - 13037600
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | |||||| | |||| |||||||| |||||| ||| |||||||||||||| ||||||    
T  13037720 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaata 13037622  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  13037621 gaatataaaactatttaataaa 13037600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 13044085 - 13043965
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | |||||| | |||| |||||||| |||||| ||| |||||||||||||| ||||||    
T  13044085 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaata 13043987  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  13043986 gaatataaaactatttaataaa 13043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 779 - 868
Target Start/End: Complemental strand, 46724193 - 46724104
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||||||||| | |||| | ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| | ||| ||||||    
T  46724193 aaataatcagagttaaaca-cgaacgggtatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 46724104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 799 - 913
Target Start/End: Complemental strand, 52339769 - 52339651
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcaga 895  Q
    |||||||| |||||| ||| |||||||| |||||| |||||||| | ||| ||||||||||||||||||||| | || |||| |||||||| ||||||||    
T  52339769 caaacgggaatgtcacactacttttcaatatttctcaaatagaaaagaatgctatttattaaaatcaactttgatagataaatcaatacttcgcagcaga 52339670  T
Q  896 atatttttc-atcatttaa 913  Q
    || |||||| |||||||||    
T  52339669 atgtttttcaatcatttaa 52339651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 16824541 - 16824421
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | ||||||   | || |||||||| |||||| | |||||||||||||||| ||||||    
T  16824541 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtatatcaccaaacgggcatgtcacattgcttttcaaaatttcttaaata 16824443  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  16824442 gaatataaaactatttaataaa 16824421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 15935796 - 15935676
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| ||||||||||  |||||||||||||||||| | ||||||||   | |  |||||||| |||||| ||| |||||||||||||| |||||    
T  15935796 tgtaacaccccgttatcccaaagcaattaaatattaaataata-aatcagagtatatct-caaacgggcatgtcacactacttttcaaaatttcttaaat 15935699  T
Q  838 agaataaaatactatttattaaa 860  Q
    |||||| || |||||||| ||||    
T  15935698 agaatataaaactatttaataaa 15935676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 53223715 - 53223770
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  53223715 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 53223770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 857
Target Start/End: Original strand, 54045875 - 54045918
Alignment:
Q  815 actgcttttcaaaatttct-aaatagaataaaatactatttatt 857  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  54045875 actgcttttcaaaatttcttaaatagaataaaatactatttatt 54045918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 15937646 - 15937531
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| ||||||||||  |||||||||||||||||| | ||||||||   | |  |||||||| |||||| ||| |||||||||||||| |||||    
T  15937646 tgtaacaccccgttatcccaaagcaattaaatattaaataata-aatcagagtatatct-caaacgggcatgtcacactacttttcaaaatttcttaaat 15937549  T
Q  838 agaataaaatactattta 855  Q
    |||||| || ||||||||    
T  15937548 agaatataaaactattta 15937531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 799 - 866
Target Start/End: Complemental strand, 10990833 - 10990765
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaac 866  Q
    |||||||| |||||| |||  |||||||||||||| |||||||| | ||| ||||||||||||||||||    
T  10990833 caaacgggaatgtcacactaattttcaaaatttctcaaatagaaaagaatgctatttattaaaatcaac 10990765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 857
Target Start/End: Complemental strand, 604694 - 604651
Alignment:
Q  815 actgcttttcaaaatttct-aaatagaataaaatactatttatt 857  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  604694 actgcctttcaaaatttcttaaatagaataaaatactatttatt 604651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 15231453 - 15231570
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||| |||||||||||||||  ||| || ||||||   ||||||||| | | |||| |||||  ||||||  ||||||||||||| ||| ||||||    
T  15231453 tgtaacacactgttatcccaacaacgtaattaataaata---taatcagagttaatcaactaacgga-atgtcacgctgcttttcaaaaattcataaata 15231548  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  15231549 gaataaaatgctatttattaaa 15231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 15237321 - 15237438
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||| |||||||||||||||  ||| || ||||||   ||||||||| | | |||| |||||  ||||||  ||||||||||||| ||| ||||||    
T  15237321 tgtaacacactgttatcccaacaacgtaattaataaata---taatcagagttaatcaactaacgga-atgtcacgctgcttttcaaaaattcataaata 15237416  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  15237417 gaataaaatgctatttattaaa 15237438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 860
Target Start/End: Original strand, 12201781 - 12201843
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||||| || |||||||| ||||    
T  12201781 caaacgggcatgtcacactgcttttcaaattttcttaaatagaatataaaactatttaataaa 12201843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 860
Target Start/End: Original strand, 15221704 - 15221757
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaa 860  Q
    |||||| |||||||||| ||| |||| |||||||||||||| ||||||||||||    
T  15221704 atgtcacactgcttttcgaaaattcttaaatagaataaaatgctatttattaaa 15221757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 855
Target Start/End: Original strand, 19442947 - 19443007
Alignment:
Q  794 aacaacaaacgggtatgtcagactgcttttcaaaatttctaaatagaataaaatactattta 855  Q
    ||||||||||||  |||| | |||||||||||||||| || ||||||||||||| |||||||    
T  19442947 aacaacaaacgga-atgttacactgcttttcaaaattccttaatagaataaaatgctattta 19443007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 855
Target Start/End: Original strand, 19445200 - 19445260
Alignment:
Q  794 aacaacaaacgggtatgtcagactgcttttcaaaatttctaaatagaataaaatactattta 855  Q
    ||||||||||||  |||| | |||||||||||||||| || ||||||||||||| |||||||    
T  19445200 aacaacaaacgga-atgttacactgcttttcaaaattccttaatagaataaaatgctattta 19445260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 741 - 866
Target Start/End: Complemental strand, 1623 - 1496
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||| |||||||||||||||||| ||||||    
T  1623 tgtaacaccctgttatcccaacaattaaatattaaataaaatagtcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaatttcttaaata 1524  T
Q  839 gaataaaatactatttattaaaatcaac 866  Q
    ||||||||||||||||||||||||||||    
T  1523 gaataaaatactatttattaaaatcaac 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 93; Significance: 8e-45; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 741 - 872
Target Start/End: Original strand, 17201 - 17332
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||||| ||| ||||||||||||||||||||||    
T  17201 tgtaacaccccgttatcccaacaattaaatattaaataaaataatcaaagttcaacaac-aacgggcatgtcacacttcttttcaaaatttctaaataga 17299  T
Q  841 ataaaatactatttatt-aaaatcaactttaaa 872  Q
    ||||||||||||||||| |||||||||||||||    
T  17300 ataaaatactatttattaaaaatcaactttaaa 17332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 8e-45; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 739 - 918
Target Start/End: Complemental strand, 21636893 - 21636709
Alignment:
Q  739 actgtaacaccctgttatcccaacaattaaatattaaataaaataatc-agagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||| | |||| ||||||||||||||| |||||| |||||||||||||||||| ||||    
T  21636893 actgtaacaccccgttaacccaacagctaaatattaaataaaataaaccagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaa 21636794  T
Q  837 tagaataaaatactatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    ||||||||||| |||| |||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||| |||||||||    
T  21636793 tagaataaaatgctatatattaaaatcaactttaatagataaatcaatactttgcagcggaatatttttcgatcacttaacatca 21636709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 741 - 869
Target Start/End: Complemental strand, 17023682 - 17023554
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||| |||||||||| |  ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  17023682 tgtaacaccccgttatcccaatatgtaaatattaaataaaataatcagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaatag 17023583  T
Q  840 aataaaatactatttattaaaatcaacttt 869  Q
    |||||| ||||||||||| |||||||||||    
T  17023582 aataaagtactatttatt-aaatcaacttt 17023554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 768 - 860
Target Start/End: Original strand, 21494334 - 21494427
Alignment:
Q  768 aatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||| ||||||| |||||||||| |||||||||||| || |||||| |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  21494334 aataataaataagataatcagagttcaacaacaaacaggcatgtcacactgcttttcaaaatttcttaaatagaaataaatactatttaataaa 21494427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 25013017 - 25013137
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | |||||| | |||| |||||||| |||||| ||| |||||||||||||| ||||||    
T  25013017 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtttaacatcaaacgggcatgtcacactacttttcaaaatttcttaaata 25013115  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  25013116 gaatataaaactatttaataaa 25013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 21999190 - 21999073
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    ||||||||||||||| ||||| ||  |||||||||||||||||   ||||| | | ||||||||||  |||||| |||||||||||||| ||| ||||||    
T  21999190 tgtaacaccctgttaacccaaacacgtaaatattaaataaaat---cagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaata 21999095  T
Q  839 gaataaaatactatttattaaa 860  Q
    |||||||||  |||||||||||    
T  21999094 gaataaaatgttatttattaaa 21999073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 739 - 854
Target Start/End: Original strand, 10034493 - 10034610
Alignment:
Q  739 actgtaacaccctgttatccc-aacaattaaatattaaataaaataatcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttc-taa 835  Q
    |||||||||||| |||||||| |||||||||||| ||||||| | |||||||||| |||| | |||| || ||||||  || |||||||||||||| |||    
T  10034493 actgtaacaccccgttatcccaaacaattaaataataaataata-aatcagagcttaacaccaaaacaggcatgtcacgctacttttcaaaatttcttaa 10034591  T
Q  836 atagaataaaatactattt 854  Q
    |||||||| || |||||||    
T  10034592 atagaatataaaactattt 10034610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 21560263 - 21560146
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||||   ||| | | | ||||| ||  |||||| |||||||||||||| ||| ||||||    
T  21560263 tgtaacaccccgttaacccaacaacataaatattaaataaaataa---gagttaatccacaaaagga-atgtcacactgcttttcaaaaattcataaata 21560168  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||||||| ||||||||    
T  21560167 gaataaaatactagttattaaa 21560146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 21981811 - 21981694
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||  |||| ||||||||  ||||||||||||||||    ||||| | | ||||||||||  |||||| |||||||||||||| ||| ||||||    
T  21981811 tgtaacacctcgttaacccaacaacgtaaatattaaataaaac---cagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaata 21981716  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  21981715 gaataaaatgctatttattaaa 21981694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 23670862 - 23670917
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  23670862 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 23670917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 26494844 - 26494899
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  26494844 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 26494899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 783 - 869
Target Start/End: Complemental strand, 27870570 - 27870483
Alignment:
Q  783 aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||| | |||| | |||||| |||| | |||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||    
T  27870570 aatcagagtttaacacctaacgggcatgttacactgcttttcaaaaatccataaatagaataaagtactatttattaaattcaacttt 27870483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 24278483 - 24278366
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||||||| |||||||||  ||| |||||||||||||   ||||| | | ||||||||||   ||||| |||||||||||||| ||| ||||||    
T  24278483 tgtaacaccctgttttcccaacaacgtaattattaaataaaat---cagagttaatcaacaaacggag-tgtcacactgcttttcaaaaattcttaaata 24278388  T
Q  839 gaataaaatactatttattaaa 860  Q
    | ||||||| ||||| ||||||    
T  24278387 ggataaaatgctattcattaaa 24278366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 24383730 - 24383847
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||||||| |||||||||  ||| |||||||||||||   ||||| | | ||||||||||   ||||| |||||||||||||| ||| ||||||    
T  24383730 tgtaacaccctgttttcccaacaacgtaattattaaataaaat---cagagttaatcaacaaacggag-tgtcacactgcttttcaaaaattcttaaata 24383825  T
Q  839 gaataaaatactatttattaaa 860  Q
    | ||||||| ||||| ||||||    
T  24383826 ggataaaatgctattcattaaa 24383847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 26362128 - 26362073
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||    
T  26362128 actgcttttcaaaaatccataaatagaataaagtactatttattaaattcaacttt 26362073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 860
Target Start/End: Original strand, 18818351 - 18818413
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||||| | |||||||||||||| ||||||||||| || |||||||| ||||    
T  18818351 caaacgggcatgtcagattacttttcaaaatttcttaaatagaatataaaactatttaataaa 18818413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 868
Target Start/End: Complemental strand, 24618448 - 24618387
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||||| | ||| ||||||    
T  24618448 atgtcacactacttttcaaagtttcttaaatagaataaaatactatttaattaaaacaactt 24618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 868
Target Start/End: Complemental strand, 24747707 - 24747646
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||||| | ||| ||||||    
T  24747707 atgtcacactacttttcaaagtttcttaaatagaataaaatactatttaattaaaacaactt 24747646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 860
Target Start/End: Original strand, 26705721 - 26705774
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaa 860  Q
    |||||| |||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  26705721 atgtcacactgcttttcaaaaattcttaaatagagtaaaatgctatttattaaa 26705774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 860
Target Start/End: Original strand, 26975454 - 26975507
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaa 860  Q
    |||||| |||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  26975454 atgtcacactgcttttcaaaaattcttaaatagagtaaaatgctatttattaaa 26975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 741 - 905
Target Start/End: Complemental strand, 22522692 - 22522524
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||  |||||||| |||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  22522692 tgtaacaccccgttatcccaacagctaaatattcaataaaataaatcagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaata 22522593  T
Q  839 gaataaaatactatttattaaaatcaacttt-aaagttaaac-aatactttgcagcagaatatttttca 905  Q
    |||||||||  |||||||||||||||||||| | || ||||| ||||||||||||| ||||||||||||    
T  22522592 gaataaaatgttatttattaaaatcaactttgatagataaacaaatactttgcagcggaatatttttca 22522524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 15266479 - 15266646
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaatag 839  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| |||||| ||||||| ||||||| |||||| ||| | ||||||||||  |||||||    
T  15266479 tgtaacaccccgttatcccaacatctaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacatttcaaaattcttaaatag 15266578  T
Q  840 aataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttca 905  Q
    |||||||| ||||||||||||||||||||| | || |||| |||||||||||||| ||||||||||||    
T  15266579 aataaaatgctatttattaaaatcaactttgatagataaatcaatactttgcagcggaatatttttca 15266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 740 - 861
Target Start/End: Complemental strand, 20021197 - 20021074
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaa-tttctaaat 837  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||| |||||| |||||||||||||| |||||||||    
T  20021197 ctgtaacaccccgttatcccaacaattaaatatcaaataaaataatcagagttcaacaaataaacgggcatgtcacactgcttttcaaaactttctaaat 20021098  T
Q  838 agaataaaatactatttattaaaa 861  Q
    |||||||| ||||||||| |||||    
T  20021097 agaataaattactatttaataaaa 20021074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 741 - 870
Target Start/End: Complemental strand, 25625553 - 25625422
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||| |||| |||||||||| ||||||| | |||||||| | |||| |||||||| |||||| ||| |||||||||||||| ||||||    
T  25625553 tgtaacaccccgttattccaagcaattaaataataaataata-aatcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaata 25625455  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    ||||| ||||||||||| |||| ||||||||||    
T  25625454 gaatataatactatttaataaacatcaacttta 25625422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 748 - 861
Target Start/End: Original strand, 19986440 - 19986554
Alignment:
Q  748 ccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttctaaatagaataaa 845  Q
    |||||||||||||| ||||||||||  || |||||||||||||| || ||||  ||||||| |||||| ||||||||||||||| |||||||||||| ||    
T  19986440 ccctgttatcccaatcaattaaataacaattaaaataatcagagttccacaaataaacgggcatgtcacactgcttttcaaaatctctaaatagaat-aa 19986538  T
Q  846 atactatttattaaaa 861  Q
    |||||||||| |||||    
T  19986539 atactatttaataaaa 19986554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 22435465 - 22435348
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||||||  |||||||| ||||||||   ||||| | |||||||||||   |||||| |||||||||||||| ||| ||||||    
T  22435465 tgtaacaccccgttatcccaacaacataaatatttaataaaat---cagagttaaacaacaaacgaa-atgtcacactgcttttcaaaaattcataaata 22435370  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||||||||||||||||    
T  22435369 gaataaaatactatttattaaa 22435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 815 - 866
Target Start/End: Original strand, 32948958 - 32949010
Alignment:
Q  815 actgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaac 866  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  32948958 actgtttttcaaaatttcttaaatagaataaaatactatttattaaaatcaac 32949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 17794350 - 17794405
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  17794350 actgcttttcaaaaattcataaatagaataaagtactatttattaaaatcaacttt 17794405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 20384477 - 20384594
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||||   ||| | | ||||||||||  |||||| |||||||||||||  ||| ||||||    
T  20384477 tgtaacaccccgttaacccaacaacataaatattaaataaaataa---gagttaatcaacaaacgga-atgtcacactgcttttcaaacattcataaata 20384572  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  20384573 gaataaaatgctatttattaaa 20384594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 799 - 860
Target Start/End: Original strand, 33087553 - 33087615
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  33087553 caaacgggaatgtcatactacttttcaaaatttcttaaatagaataaaatactatttaataaa 33087615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 779 - 855
Target Start/End: Original strand, 39362877 - 39362953
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactattta 855  Q
    |||||||||||| | |||| | |||||| |||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  39362877 aaataatcagagttaaaca-cgaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactattta 39362953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 739 - 859
Target Start/End: Complemental strand, 18025492 - 18025372
Alignment:
Q  739 actgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||||| |||||||||||||  ||  ||| |||||||||   ||||| | | |||||||  ||  ||||| |||||||||||||||||| ||||    
T  18025492 actgtaacaccccgttatcccaacaacgtatttataaaataaaat---cagagttaaccaacaaaacggagtgtcacactgcttttcaaaatttcttaaa 18025396  T
Q  837 tagaat-aaaatactatttattaa 859  Q
    |||||| |||||||||||||||||    
T  18025395 tagaatgaaaatactatttattaa 18025372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 17273546 - 17273429
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    ||||||||||  ||| ||||||||  |||||||||| ||||||   ||||| | | ||||||||||  |||||| |||||||||||||| ||| ||||||    
T  17273546 tgtaacaccccattaacccaacaacgtaaatattaagtaaaat---cagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaata 17273451  T
Q  839 gaataaaatactatttattaaa 860  Q
    |||||||||  |||||||||||    
T  17273450 gaataaaatcatatttattaaa 17273429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 20392381 - 20392498
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | ||||||||||  |||||| | ||||||| |||| ||| ||||||    
T  20392381 tgtaacaccccgttaacccaacaacgtaaatattaaataaaat---cagagttaatcaacaaacgga-atgtcacattgcttttaaaaaattcataaata 20392476  T
Q  839 gaataaaatactatttattaaa 860  Q
     |||||||| ||||||||||||    
T  20392477 aaataaaatgctatttattaaa 20392498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 776 - 857
Target Start/End: Complemental strand, 21414334 - 21414253
Alignment:
Q  776 ataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttatt 857  Q
    |||| ||||||||||   ||||||||||||  |||| | |||||||||||||| | | |||||||||||||||||||||||||    
T  21414334 ataatataatcagagtaaaacaacaaacgga-atgttacactgcttttcaaaaatccataaatagaataaaatactatttatt 21414253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 815 - 859
Target Start/End: Complemental strand, 15005600 - 15005555
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaa 859  Q
    |||||||||||||| | | |||||||||||||||||||||||||||    
T  15005600 actgcttttcaaaaatccataaatagaataaaatactatttattaa 15005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 88; Significance: 8e-42; HSPs: 4)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 33828 - 33995
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||  |||||||| |||||||||| |||||| ||||||||||||||  |||||| |||||||||||||||||| | ||||    
T  33828 tgtaacacccagttatcccaacagctaaatattcaataaaataaatcagagttcaacaacaaacggaaatgtcacactgcttttcaaaatttcttgaata 33927  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||||||| ||||||||||||||||||||   ||||||| |||||||||||||| ||||||||||||    
T  33928 gaataaaatgctatttattaaaatcaacttggtagttaaaccaatactttgcagcggaatatttttca 33995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 40825 - 40992
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttcta-aata 838  Q
    |||||||||| ||||||||||||  |||||||| |||||||||| |||||| ||||||||||||| | |||||| ||| |||||||||||||||  ||||    
T  40825 tgtaacaccccgttatcccaacagctaaatattcaataaaataaatcagagttcaacaacaaacgagaatgtcacacttcttttcaaaatttcttgaata 40924  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||||||| |||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||    
T  40925 gaataaaatgctatttattaaaatcaacttgatagttaaaccaatactttgcagcggaatatttttca 40992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 745 - 905
Target Start/End: Original strand, 28552 - 28715
Alignment:
Q  745 acaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttcta-aatagaat 842  Q
    ||||| |||||||||||||  |||||||| |||||||||| |||||| ||||||| ||||||  |||||| ||||||||||||||||| |  ||||||||    
T  28552 acaccatgttatcccaacagctaaatattcaataaaataaatcagagttcaacaataaacggaaatgtcacactgcttttcaaaattttttgaatagaat 28651  T
Q  843 aaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||| |||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||    
T  28652 aaaatgctatttattaaaatcaacttgatagttaaatcaatactttgcagcggaatatttttca 28715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 745 - 905
Target Start/End: Original strand, 32667 - 32830
Alignment:
Q  745 acaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttcta-aatagaat 842  Q
    ||||| |||||||||||||  |||||||| |||||||||| |||||| ||||||| ||||||  |||||| ||||||||||||||||| |  ||||||||    
T  32667 acaccatgttatcccaacagctaaatattcaataaaataaatcagagttcaacaataaacggaaatgtcacactgcttttcaaaattttttgaatagaat 32766  T
Q  843 aaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||| |||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||    
T  32767 aaaatgctatttattaaaatcaacttgatagttaaatcaatactttgcagcggaatatttttca 32830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 741 - 869
Target Start/End: Original strand, 52858 - 52986
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaa-acgggtatgtcagactgcttttcaaaatttctaaatag 839  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || || |||||| |||||||||||||||| ||||||||    
T  52858 tgtaacaccccgttatcccaacaattaaatattaaataaaataatcagagttcaacaacaatacaggcatgtcacactgcttttcaaaattgctaaatag 52957  T
Q  840 aataaaatactatttattaaaatcaacttt 869  Q
    |||||| ||||||||||| |||||||||||    
T  52958 aataaagtactatttatt-aaatcaacttt 52986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 741 - 916
Target Start/End: Complemental strand, 1023 - 843
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||| ||||  ||||||||||||||||||| |||||| ||||||||||||||| || ||| |||||||||||||||||| ||||||    
T  1023 tgtaacaccccgttatccaaacagctaaatattaaataaaataaatcagagttcaacaacaaacgggaatatcacactgcttttcaaaatttcttaaata 924  T
Q  839 gaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    ||||||||| ||||||||||||||||||||| | || |||| |||||||||||||| |||| ||| || ||||||||||||    
T  923 gaataaaatgctatttattaaaatcaactttgatagataaatcaatactttgcagcggaatgtttctcaatcatttaacat 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 20113 - 20293
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||  |||||||| | |  |||| |||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||| |||||||    
T  20113 tgtaacacctcgttatccctatagctaaacattaaataaaataatcagagttcaacaacaaacgggcatatcacactgcttttcaaaatttcttaaatag 20212  T
Q  840 aataaaatactatttattaaaatcaacttta--aagttaaacaatactttgcagcagaatatttttcatcatttaacatca 918  Q
    |||||||||||||||||| ||||||||||||  || |||| ||| |||||| ||| ||||||||||||  | |||||||||    
T  20213 aataaaatactatttatttaaatcaactttaataatttaaccaaaactttgtagcggaatatttttcaataattaacatca 20293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 30780 - 30960
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||| |||||||| | |  |||| |||||||||||||||||||| ||||||||||| ||| || ||| ||| |||||||||||||| |||||||    
T  30780 tgtaacaccccgttatccccatagctaaacattaaataaaataatcagagttcaacaacaaatgggcatatcacactacttttcaaaatttcataaatag 30879  T
Q  840 aataaaatactatttattaaaatcaactttaa-ag-ttaaacaatactttgcagcagaatatttttcatcatttaacatca 918  Q
    |||||||||||||||||| ||||||||||||| || |||| ||| |||||||| | ||||||||||||  | |||||||||    
T  30880 aataaaatactatttatttaaatcaactttaatagtttaaccaaaactttgcaccggaatatttttcaataattaacatca 30960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 742 - 871
Target Start/End: Complemental strand, 93538 - 93407
Alignment:
Q  742 gtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||  |||| | |||||||||||||||||| |||||||    
T  93538 gtaacaccccgttatcccaaacaattaaataataaataaaataatcagagttcaacaacaaacggacatgttacactgcttttcaaaatttcttaaatag 93439  T
Q  840 aataaaatactatttattaaaatcaactttaa 871  Q
    | |||||||||||||| |||||||||||||||    
T  93438 agtaaaatactatttaataaaatcaactttaa 93407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 5e-37; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 741 - 901
Target Start/End: Complemental strand, 24683439 - 24683277
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||| ||||||| || |||||||||||||||||| |||||||  |||||| |||||| |||||||||||||||||| ||||||    
T  24683439 tgtaacaccccgttaacccaaacaattaa-taataaataaaataatcagagttcaacaaacaacgggcatgtcacactgcttttcaaaatttcttaaata 24683341  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatattt 901  Q
    ||||| |||||||||||||||| ||||||| | ||||||| ||||| |||||||||||||||||    
T  24683340 gaatataatactatttattaaattcaacttaatagttaaaccaataatttgcagcagaatattt 24683277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 741 - 869
Target Start/End: Original strand, 23147915 - 23148044
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||| |||||||||||||||  |||||||| |||||||| ||||||| |||||| ||| |||||||||||||| ||||||    
T  23147915 tgtaacaccccgttatcccaacaactaaatattaaataaataaatcagagttcaacaacaaaacgggaatgtcacactacttttcaaaatttcttaaata 23148014  T
Q  839 gaataaaatactatttattaaaatcaacttt 869  Q
    ||||||| ||||||||||| |||||||||||    
T  23148015 gaataaagtactatttatt-aaatcaacttt 23148044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 741 - 869
Target Start/End: Original strand, 23559705 - 23559834
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaac-aaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||| |||||||||||||||  |||||||| |||||||| ||||||| |||||| ||| |||||||||||||| ||||||    
T  23559705 tgtaacaccccgttatcccaacaactaaatattaaataaataaatcagagttcaacaacaaaacgggaatgtcacactacttttcaaaatttcttaaata 23559804  T
Q  839 gaataaaatactatttattaaaatcaacttt 869  Q
    ||||||| ||||||||||| |||||||||||    
T  23559805 gaataaagtactatttatt-aaatcaacttt 23559834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 24527978 - 24528098
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| ||||||| || ||||||| |||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  24527978 tgtaacaccccgttatcccaaacaattaa-taataaataagataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttcttaaata 24528076  T
Q  839 gaataaaatactatttattaaa 860  Q
    |||  |||||||||||| ||||    
T  24528077 gaaataaatactatttaataaa 24528098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 20915113 - 20914998
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| |||||||  ||||||||| | | ||||||||||| |||||| |||| ||||||||||||| ||||||    
T  20915113 tgtaacaccccgttatcccaaacaattaaataataaataat-taatcagagtttatcaacaaacgggcatgtcacactgtttttcaaaatttcttaaata 20915015  T
Q  839 gaataaaatactattta 855  Q
    ||||| || ||||||||    
T  20915014 gaatataaaactattta 20914998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 799 - 869
Target Start/End: Original strand, 28351816 - 28351887
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||| |||||| ||| ||||||||||||||| |||||||| | ||| |||||||||||||||||||||    
T  28351816 caaacgggaatgtcacactacttttcaaaatttctcaaatagaaaagaatgctatttattaaaatcaacttt 28351887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 37378468 - 37378523
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  37378468 actgcttttcaaaaatccataaatagaataaaatactatttattaaaatcaacttt 37378523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 869
Target Start/End: Complemental strand, 21242902 - 21242775
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||| |||||||||| ||||||| |||  ||||   ||||| | |||| | |||||| |||  | |||||||||||||| | | ||||||    
T  21242902 tgtaacaccccgttttcccaacaatataaatataaaagtaaat---cagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaata 21242806  T
Q  839 gaataaaatactatttattaaaatcaacttt 869  Q
    ||||||| |||||||||||||||||||||||    
T  21242805 gaataaagtactatttattaaaatcaacttt 21242775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 21240280 - 21240225
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  21240280 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 21240225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 23340349 - 23340294
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  23340349 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 23340294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 31502526 - 31502581
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  31502526 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 31502581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 31505092 - 31505147
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  31505092 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 31505147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 20354172 - 20354060
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  ||||||||||||| |||   ||||| | | ||||||||||  |||||| |||||||||||||| | | ||||||    
T  20354172 tgtaacacccggttaacccaacaacgtaaatattaaatagaat---cagagttaatcaacaaacgga-atgtcacactgcttttcaaaaatccataaata 20354077  T
Q  839 gaataaaatactattta 855  Q
    |||||||||||||||||    
T  20354076 gaataaaatactattta 20354060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 808 - 869
Target Start/End: Original strand, 28347989 - 28348051
Alignment:
Q  808 atgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||| ||| ||||||||||||||| |||||||| | ||| |||||||||||||||||||||    
T  28347989 atgtcacactacttttcaaaatttctcaaatagaaaagaatgctatttattaaaatcaacttt 28348051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 782
Target Start/End: Original strand, 22840323 - 22840364
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaat 782  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  22840323 tgtaacaccccgttatcccaacagttaaatattaaataaaat 22840364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 808 - 859
Target Start/End: Complemental strand, 10041025 - 10040973
Alignment:
Q  808 atgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaa 859  Q
    |||||| |||||||||||||| | | |||||||||||||||||||||||||||    
T  10041025 atgtcacactgcttttcaaaaatccataaatagaataaaatactatttattaa 10040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 856
Target Start/End: Original strand, 31517590 - 31517704
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    ||||||| || ||| |||||||||| ||||||||||||||   |||||||| | | |||||||| || |||||| ||||||||||||||  || ||||||    
T  31517590 tgtaacatcccgttttcccaacaatataaatattaaataa---aatcagagttaatcaacaaac-ggaatgtcacactgcttttcaaaaaatcataaata 31517685  T
Q  839 gaataaaat-actatttat 856  Q
    ||||||||| |||||||||    
T  31517686 gaataaaataactatttat 31517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 857
Target Start/End: Complemental strand, 12628851 - 12628808
Alignment:
Q  815 actgcttttcaaaatttct-aaatagaataaaatactatttatt 857  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  12628851 actgcttttcaaaattttttaaatagaataaaatactatttatt 12628808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 821 - 870
Target Start/End: Complemental strand, 21124654 - 21124603
Alignment:
Q  821 tttcaaaatttct-aaatagaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  21124654 tttcaaaatttcttaaatagaataaaatactatttaataaacatcaacttta 21124603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 902
Target Start/End: Original strand, 22859748 - 22859854
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa-atcaactttaa-agttaaacaatactttgcagcaga 895  Q
    |||||||| |||||| ||| |||||||||||||| |||||||| || || |||||||| |||| | |||||| || ||||  |||| |||||||||| ||    
T  22859748 caaacgggcatgtcacactacttttcaaaatttcttaaatagattataaaactatttaataaacaacaacttaaacagtttcacaaaactttgcagcgga 22859847  T
Q  896 atatttt 902  Q
    |||||||    
T  22859848 atatttt 22859854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 858
Target Start/End: Original strand, 23079225 - 23079341
Alignment:
Q  740 ctgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| |||| ||||||||  | |||||||||||||||   ||||| | | ||||||||||  |||||| ||| |||| ||||| | | |||||    
T  23079225 ctgtaacaccccgttaacccaacaacgtgaatattaaataaaat---cagagttaatcaacaaacgga-atgtcacacttctttacaaaaatccataaat 23079320  T
Q  838 agaataaaatactatttatta 858  Q
    |||||||||||||||||||||    
T  23079321 agaataaaatactatttatta 23079341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 2e-36; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 739 - 905
Target Start/End: Original strand, 29856105 - 29856275
Alignment:
Q  739 actgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||| ||||    
T  29856105 actgtaacaccccgttatcccaacaactaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactactttttaaaatttcttaaa 29856204  T
Q  837 tagaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||||||||  ||||||||||||||||||||| | || |||| |||||||||| ||| ||||| ||||||    
T  29856205 tagaataaaacgctatttattaaaatcaactttgatagataaatcaatactttgtagcggaatacttttca 29856275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 740 - 853
Target Start/End: Original strand, 15311879 - 15311994
Alignment:
Q  740 ctgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| |||| |||||||| ||||||||| ||||||||| ||| || |||||||||||||||  ||||| |||||||||||||||||| |||||    
T  15311879 ctgtaacaccccgttaacccaacaactaaatattacataaaataaatcaaagttcaacaacaaacgggattgtcacactgcttttcaaaatttcttaaat 15311978  T
Q  838 agaataaaatactatt 853  Q
    |||||||||| |||||    
T  15311979 agaataaaatgctatt 15311994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 15074596 - 15074765
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaa-caaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| || ||||||| |   ||||||||||||||  |||||||| | ||| | |||||||| |||||| | |||||||||||||||| ||||||    
T  15074596 tgtaacaccccgtcatcccaatagcaaaatattaaataaataaatcagagttaaaccatcaaacgggaatgtcacattgcttttcaaaatttcttaaata 15074695  T
Q  839 gaata-aaatactattta-ttaaaatcaactt---taaagttaaacaatactttgcagcagaatatttttca 905  Q
    ||| | |||| ||||||| |||||||||||||   ||||  ||| |||||||||||||| ||||||||||||    
T  15074696 gaaaataaatgctatttatttaaaatcaactttggtaaa--taaccaatactttgcagcggaatatttttca 15074765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 740 - 869
Target Start/End: Complemental strand, 15722773 - 15722645
Alignment:
Q  740 ctgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||||||| |||||||||  ||||||| |||  ||||   ||||| | |||| | |||||| |||  | ||| |||||||||| ||| |||||    
T  15722773 ctgtaacaccctgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctaacgggcatgctacacttcttttcaaaaattcataaat 15722677  T
Q  838 agaataaaatactatttattaaaatcaacttt 869  Q
    |||||||| |||||||||||||||||||||||    
T  15722676 agaataaagtactatttattaaaatcaacttt 15722645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 857
Target Start/End: Complemental strand, 16372632 - 16372518
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | ||||||||||  |||| | |||||| ||||||||||| ||||||    
T  16372632 tgtaacaccccgttaacccaacaaagtaaatattaaataaaat---cagagttaatcaacaaacgga-atgttacactgctcttcaaaatttcataaata 16372537  T
Q  839 gaataaaatactatttatt 857  Q
     ||||||||||||||||||    
T  16372536 aaataaaatactatttatt 16372518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 843
Target Start/End: Original strand, 16483992 - 16484095
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||  | | |||||| | |||| |||||||| |||||| ||| |||||||||||||| ||||||    
T  16483992 tgtaacaccccgttatcccaaacaattaaataataaatactaca-tcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaata 16484090  T
Q  839 gaata 843  Q
    |||||    
T  16484091 gaata 16484095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 785
Target Start/End: Original strand, 20594738 - 20594782
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataat 785  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  20594738 tgtaacaccccgttatcccaacagttaaatattaaataaaataat 20594782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 868
Target Start/End: Complemental strand, 22726693 - 22726563
Alignment:
Q  737 ggactgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taa 835  Q
    ||||||||||| ||||||||||||| | ||||  || | |  |||||||||||| | |||| | |||||| |||||| ||| |||||||||||||| |||    
T  22726693 ggactgtaacatcctgttatcccaa-acttaataataataataaataatcagagttaaaca-cgaacgggcatgtcacactacttttcaaaatttcttaa 22726596  T
Q  836 atagaataaaatactatttattaaaatcaactt 868  Q
    ||||||||||||| |||||| | ||| ||||||    
T  22726595 atagaataaaataatatttaattaaaacaactt 22726563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 799 - 869
Target Start/End: Original strand, 41790623 - 41790695
Alignment:
Q  799 caaacgggtatgtcagactgc-ttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||| |||||| ||| | ||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  41790623 caaacgggcatgtcacacttcattttcaaaattccataaatagaataaagtactatttattaaaatcaacttt 41790695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 16279407 - 16279352
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  16279407 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 16279352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 857
Target Start/End: Original strand, 27026891 - 27026934
Alignment:
Q  815 actgcttttcaaaatttct-aaatagaataaaatactatttatt 857  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27026891 actgcttttcaaaatttcttaaatagaataaaatactatttatt 27026934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 28384283 - 28384338
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  28384283 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 28384338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 33847845 - 33847900
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  33847845 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 33847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 666 - 729
Target Start/End: Original strand, 47719246 - 47719308
Alignment:
Q  666 cccaaaaatcttttatgccccttgaattttttcaatttgcccttaattcaagagttttgtatgt 729  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||||| |||||||| |||||||    
T  47719246 cccaaaaatcttttatgccccctgaa-tttcccaatttgcccttaatccaagagttctgtatgt 47719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 666 - 729
Target Start/End: Complemental strand, 47854837 - 47854775
Alignment:
Q  666 cccaaaaatcttttatgccccttgaattttttcaatttgcccttaattcaagagttttgtatgt 729  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||||| |||||||| |||||||    
T  47854837 cccaaaaatcttttatgccccctgaa-tttcccaatttgcccttaatccaagagttctgtatgt 47854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 53388775 - 53388720
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  53388775 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 53388720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 14992417 - 14992295
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| ||||||||||  |||||||||| |||||| || | | |||| | |||| |||| |||| |||||| ||| |||||||||||||| ||||    
T  14992417 tgtaacaccccgttatcccaaagcaattaaataataaatataaca-taagagtttaacaccaaaacgggcatgtcacactacttttcaaaatttcttaaa 14992319  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  14992318 tagaatataaaactatttaataaa 14992295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 30237130 - 30237252
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| ||||||||||  |||||||| | |||||| || | |||||| | |||| |||| |||| |||||| ||| |||||||||||||| ||||    
T  30237130 tgtaacaccccgttatcccaaagcaattaaacaataaatataaca-tcagagtttaacaccaaaacgggcatgtcacactacttttcaaaatttcttaaa 30237228  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  30237229 tagaatataaaactatttaataaa 30237252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 1103660 - 1103605
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| ||||||||||||| |||||||||    
T  1103660 actgcttttcaaaaatccataaatagaataaagtactatttattaatatcaacttt 1103605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 857
Target Start/End: Original strand, 6510737 - 6510780
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttatt 857  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  6510737 actgcttttcgaaatttcctaaatagaataaaatactatttatt 6510780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 869
Target Start/End: Complemental strand, 15281200 - 15281145
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||    
T  15281200 actgcttttcaaaaatccataaatagaataaagtactatttattaaattcaacttt 15281145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 815 - 860
Target Start/End: Original strand, 13876995 - 13877041
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||    
T  13876995 actgcttttcaaaaatccataaatagaataaaatactatttattaaa 13877041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 916
Target Start/End: Original strand, 15317292 - 15317362
Alignment:
Q  849 ctatttattaaaatcaactttaa-agttaaa-caatactttgcagcagaatatttttc-atcatttaacat 916  Q
    |||| |||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||| |||||||    
T  15317292 ctatatattaaaatcaactttaatagataaatcaatactttgcagcggaatatttttcgatcacttaacat 15317362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 860
Target Start/End: Original strand, 18260736 - 18260798
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  18260736 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 18260798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 860
Target Start/End: Original strand, 18270699 - 18270761
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  18270699 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 18270761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 800 - 860
Target Start/End: Complemental strand, 15005703 - 15005642
Alignment:
Q  800 aaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  15005703 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 15005642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1979 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 739 - 918
Target Start/End: Original strand, 422 - 606
Alignment:
Q  739 actgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||| |||| | |||||||||||||||||| || |    
T  422 actgttacaccccgttatcccaacaaataaatattaaataaaataatcagagttcagcaaacaaacgggcatgtaacactgcttttcaaaatttcttata 521  T
Q  837 tagaat-aaaatactatttattaaaatcaactttaaag-ttaaacaatactttgcagcagaatatttttc-atcatttaacatca 918  Q
    || ||| |||||| ||||||||||||||||||| | || |||| ||||||||||| || ||||||||||| |||| |||||||||    
T  522 taaaataaaaataatatttattaaaatcaacttaatagtttaaccaatactttgcggcggaatatttttcaatcaattaacatca 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 3e-35; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 382802 - 382970
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaat-aatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||  ||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||| |||||||||||||| ||||||    
T  382802 tgtaacaccccgttatcccaacatctaaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacttttcaaaatttcttaaata 382901  T
Q  839 gaataaaatactatttattaaaatcaa-ctttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    ||||||||| ||||||||||||||||| ||| | || |||| |||||||||| ||| |||| |||||||    
T  382902 gaataaaatgctatttattaaaatcaaccttgatagataaatcaatactttgtagcggaatgtttttca 382970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 741 - 905
Target Start/End: Original strand, 383424 - 383591
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaac-aacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||| |  ||||| |||||||||| |||||| |||||||||||||||||| ||||||    
T  383424 tgtaacaccccgttatcccaacagctaaatattaaataaaataatcatacttcaacaaacaaacgggaatgtcacactgcttttcaaaatttcttaaata 383523  T
Q  839 gaataaaatactatttattaaaatcaa-ctttaaagttaaacaatactttgcagcagaatatttttca 905  Q
    |||||||||| ||||||| |||||||| ||| | |    | |||||||||||||| ||||||||||||    
T  383524 gaataaaatattatttatcaaaatcaatcttgataaaatatcaatactttgcagcggaatatttttca 383591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 854
Target Start/End: Original strand, 58486 - 58598
Alignment:
Q  740 ctgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| |||| ||||||||  ||| |||||||||||||   ||||| | | |||||||  ||  ||||| |||||||||||||||||| |||||    
T  58486 ctgtaacaccccgttaacccaacaacgtaattattaaataaaat---cagagttaatcaacaaaacggagtgtcacactgcttttcaaaatttcgtaaat 58582  T
Q  838 agaataaaatactattt 854  Q
    || ||||||||||||||    
T  58583 ag-ataaaatactattt 58598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 741 - 901
Target Start/End: Complemental strand, 3342 - 3181
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaata 838  Q
    |||||||||| |||||||||| ||| ||| || |||||||||||||||||| ||||||||||  ||| |||||| |||||||||||||| |||| |||||    
T  3342 tgtaacaccccgttatcccaaacaagtaa-taataaataaaataatcagagttcaacaacaat-gggcatgtcacactgcttttcaaaacttcttaaata 3245  T
Q  839 gaataaaatactatttattaaaatcaactttaaagttaaa-caatactttgcagcagaatattt 901  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||  |||||||    
T  3244 gaataaaatactatttattaaaatcaacttaatagttaaaccaataatttgcagcgaaatattt 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 4e-31; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 5380020 - 5380141
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaattt-ctaaata 838  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||  ||||||    
T  5380020 tgtaacaccccgttatcccaaacaattaaataataaataaaataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttattaaata 5380119  T
Q  839 gaataaaatactatttattaaa 860  Q
    |||  |||||||||||| ||||    
T  5380120 gaaataaatactatttaataaa 5380141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 752 - 905
Target Start/End: Original strand, 24474676 - 24474834
Alignment:
Q  752 gttatcccaacaattaaatattaaataaaataatcagagctcaacaa-caaacgggtatgtcagactgcttttcaaaatttc-taaatagaata-aaata 848  Q
    |||||||||| |  |||||||||||||||  |||||||| ||||| | |||||||| || ||| |||||||||||||||||| ||||||||| | ||||     
T  24474676 gttatcccaatagctaaatattaaataaataaatcagagttcaaccatcaaacgggaatttcacactgcttttcaaaatttcttaaatagaaaataaatg 24474775  T
Q  849 ctattta-ttaaaatcaactt---taaagttaaacaatactttgcagcagaatatttttca 905  Q
    ||||||| |||||||||||||   ||||  ||| |||||||||||||||||||||||||||    
T  24474776 ctatttatttaaaatcaactttggtaaa--taaccaatactttgcagcagaatatttttca 24474834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 765 - 905
Target Start/End: Complemental strand, 21746520 - 21746377
Alignment:
Q  765 ttaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa-at 862  Q
    ||||||| |||||| |||| |||||| | | || |||||||| |||||| ||| |||||||||||||| |||||||||||||||||| |||| |||| ||    
T  21746520 ttaaataataaatataata-tcagagtttatcaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactttttaataaacat 21746422  T
Q  863 caactttaa-ag-ttaaacaatactttgcagcagaatatttttca 905  Q
    ||||||||| || || | ||| |||||||||| ||||||||||||    
T  21746421 caactttaatagtttcaccaaaactttgcagcggaatatttttca 21746377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 775 - 859
Target Start/End: Complemental strand, 16398149 - 16398063
Alignment:
Q  775 aataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttc-aaaatttctaaatagaataaaatactatttattaa 859  Q
    |||||||||| |||||| ||||||||||||||| |||||| ||| |||||| ||||||  ||||||||||||||| |||||||||||    
T  16398149 aataaaataaatcagagttcaacaacaaacgggaatgtcacactacttttctaaaattcttaaatagaataaaatgctatttattaa 16398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 741 - 843
Target Start/End: Complemental strand, 21738142 - 21738039
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    ||||| |||| |||||||||| |||||||||| ||||||| | |||||||| | |||| |||||||| |||||| ||| |||||||||||||| ||||||    
T  21738142 tgtaataccccgttatcccaaacaattaaatagtaaataata-aatcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaata 21738044  T
Q  839 gaata 843  Q
    |||||    
T  21738043 gaata 21738039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 18822790 - 18822907
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | |||||||| |  |||||| |||||||||||||| ||| ||||||    
T  18822790 tgtaacaccccgttaacccaacaacgtaaatattaaataaaat---cagagttaatcaacaaacaga-atgtcacactgcttttcaaaaattcataaata 18822885  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  18822886 gaataaaatgctatttattaaa 18822907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 775 - 859
Target Start/End: Original strand, 16399918 - 16400004
Alignment:
Q  775 aataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttc-aaaatttctaaatagaataaaatactatttattaa 859  Q
    |||||||||| |||| | ||||||||||||||| |||||| ||| |||||| ||||||  ||||||||||||||| |||||||||||    
T  16399918 aataaaataaatcagcgttcaacaacaaacgggaatgtcacactacttttctaaaattcttaaatagaataaaatgctatttattaa 16400004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 801 - 868
Target Start/End: Complemental strand, 11810498 - 11810430
Alignment:
Q  801 aacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaactt 868  Q
    |||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  11810498 aacgggcatgtcacactacttttcaaaatttcttaaatagaataaaatactatttaattaaaacaactt 11810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 295543 - 295598
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  295543 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 295598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 21107961 - 21108016
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  21107961 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 21108016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 20087283 - 20087162
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| |||||||||| ||||||||||   ||||| | |||||||| | | || |||| |||| |||||| |||||||||||||||||| |||||    
T  20087283 tgtaacaccccgttatcccaaacaattaaataaataataata-aatcagagtttatcaccaaaacgggcatgtcacactgcttttcaaaatttcttaaat 20087185  T
Q  838 agaataaaatactatttattaaa 860  Q
    |||||| || |||||||| ||||    
T  20087184 agaatataaaactatttaataaa 20087162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 800 - 870
Target Start/End: Complemental strand, 7793511 - 7793439
Alignment:
Q  800 aaacgggtatgtcagactgct-tttcaaaatttctaaatagaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||| |||||| |||||| ||||||||||  ||||||||||| ||||||||||| |||| ||||||||||    
T  7793511 aaacgggcatgtcacactgctatttcaaaattcttaaatagaatataatactatttaataaacatcaacttta 7793439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 23630340 - 23630462
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| | ||||||||  |||||||||| |||||| || || ||||| | |||| |||| |||| |||||| ||| |||||||||||||| ||||    
T  23630340 tgtaacaccccgatatcccaaagcaattaaataataaatataacaa-cagagtttaacatcaaatcgggcatgtcacactacttttcaaaatttcttaaa 23630438  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  23630439 tagaatataaaactatttaataaa 23630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 23711859 - 23711981
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| | ||||||||  |||||||||| |||||| || | |||||| | |||| |||| ||||||||||| ||| ||||| |||||||| ||||    
T  23711859 tgtaacaccccgatatcccaaagcaattaaataataaatataaca-tcagagtttaacatcaaatcgggtatgtcacactactttttaaaatttcttaaa 23711957  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  23711958 tagaatataaaactatttaataaa 23711981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 833 - 905
Target Start/End: Complemental strand, 21987703 - 21987628
Alignment:
Q  833 taaatagaataaaatactatttattaaa-atcaactttaa-ag-ttaaacaatactttgcagcagaatatttttca 905  Q
    ||||||||||||||||||||||| |||| ||||||||||| || || | ||| |||||||||| ||||||||||||    
T  21987703 taaatagaataaaatactatttaataaacatcaactttaatagtttcaccaaaactttgcagcggaatatttttca 21987628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 819 - 857
Target Start/End: Original strand, 24086542 - 24086581
Alignment:
Q  819 cttttcaaaatttct-aaatagaataaaatactatttatt 857  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24086542 cttttcaaaatttcttaaatagaataaaatactatttatt 24086581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 37357580 - 37357635
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||| ||||||||    
T  37357580 actgcttttcaaaaatccataaatagaataaagtactatttattaaattcaacttt 37357635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 819 - 913
Target Start/End: Original strand, 293094 - 293192
Alignment:
Q  819 cttttcaaaatttct-aaatagaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcagaatatttttc-atcatttaa 913  Q
    ||||||||||||||| |||||||| | |||  |||||||||||||||||||| | || |||| || ||||| |||||||||| |||||| |||||||||    
T  293094 cttttcaaaatttctcaaatagaaaagaatgttatttattaaaatcaactttgatagataaatcactacttcgcagcagaatgtttttcaatcatttaa 293192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 799 - 860
Target Start/End: Complemental strand, 31928142 - 31928080
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  31928142 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 31928080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 800 - 860
Target Start/End: Complemental strand, 11141735 - 11141674
Alignment:
Q  800 aaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  11141735 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 11141674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 779 - 859
Target Start/End: Complemental strand, 13529775 - 13529696
Alignment:
Q  779 aaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaa 859  Q
    |||||||||||| | | ||||||||||  |||||| ||| |||||||||| | | |||||||||||||||||||||||||||    
T  13529775 aaataatcagag-taatcaacaaacgga-atgtcacactacttttcaaaaatccataaatagaataaaatactatttattaa 13529696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 800 - 860
Target Start/End: Original strand, 21697583 - 21697644
Alignment:
Q  800 aaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  21697583 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 21697644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 741 - 868
Target Start/End: Original strand, 1211 - 1338
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| ||||||||||||  |||||||||||||||  ||| |||| ||||| |  |||||| |||||| ||||||||||||| ||  ||||||||    
T  1211 tgtaacaccccgttatcccaacagctaaatattaaataaataaataagagttcaaccatcaacgggaatgtcacactgcttttcaaatttcttaaataga 1310  T
Q  841 ataaaatactatttattaaaatcaactt 868  Q
    ||||||||||||||| ||||||||||||    
T  1311 ataaaatactatttaataaaatcaactt 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 64; Significance: 2e-27; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 741 - 868
Target Start/End: Original strand, 24027 - 24154
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| ||||||||||||  |||||||||||||||  ||| |||| ||||| |  |||||| |||||| ||||||||||||| ||  ||||||||    
T  24027 tgtaacaccccgttatcccaacagctaaatattaaataaataaataagagttcaaccatcaacgggaatgtcacactgcttttcaaatttcttaaataga 24126  T
Q  841 ataaaatactatttattaaaatcaactt 868  Q
    ||||||||||||||| ||||||||||||    
T  24127 ataaaatactatttaataaaatcaactt 24154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 741 - 868
Target Start/End: Original strand, 52919 - 53046
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttctaaataga 840  Q
    |||||||||| ||||| ||||||  |||||||||||||||  ||||| || ||||| ||||||||| |||||| ||||||||||||| ||  ||||||||    
T  52919 tgtaacaccccgttattccaacagctaaatattaaataaataaatcatagttcaaccacaaacgggaatgtcacactgcttttcaaatttcttaaataga 53018  T
Q  841 ataaaatactatttattaaaatcaactt 868  Q
    ||||||||||| ||| ||||||||||||    
T  53019 ataaaatactaattaataaaatcaactt 53046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 740 - 870
Target Start/End: Original strand, 117428 - 117559
Alignment:
Q  740 ctgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||| |||| ||||| |||||||||| |||||||||| || |||| |||||||| |||||| |||||| |||  ||||||||||||| |||||    
T  117428 ctgtaacaccccgttaacccaaacaattaaataataaataaaat-attagagttcaacaac-aacgggcatgtcacactaattttcaaaatttcttaaat 117525  T
Q  838 agaataaaatactatttattaaa-atcaacttta 870  Q
    |||||| ||||||||||| |||| ||||||||||    
T  117526 agaatagaatactatttaataaacatcaacttta 117559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 61; Significance: 1e-25; HSPs: 3)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 741 - 871
Target Start/End: Complemental strand, 10753 - 10621
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataa-tcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||||  ||| ||||||||||||||| |||||| ||| ||||||||||| |||||| |||||||||||||||||| ||||||    
T  10753 tgtaacaccccgttatcccaacagctaattattaaataaaataaatcagagttcatcaacaaacgggaatgtcacactgcttttcaaaatttcttaaata 10654  T
Q  839 gaataaaatactatttattaaaatcaactttaa 871  Q
    |||  |||| |||||||  |||| |||||||||    
T  10653 gaaataaatgctatttaacaaaaacaactttaa 10621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 857
Target Start/End: Complemental strand, 9741 - 9698
Alignment:
Q  815 actgcttttcaaaatttct-aaatagaataaaatactatttatt 857  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  9741 actgcttttcaaaatttcttaaataggataaaatactatttatt 9698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 800 - 860
Target Start/End: Complemental strand, 4827 - 4766
Alignment:
Q  800 aaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  4827 aaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaa 4766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 741 - 870
Target Start/End: Complemental strand, 61808 - 61675
Alignment:
Q  741 tgtaacaccctgttatcccaacaatta--aatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| |||||||||| ||| |  |||| |||||||||||||||||||||| |||  |||||| |||||| ||| |||||||||||||| |||||    
T  61808 tgtaacaccccgttatcccaaaaatcattaataataaataaaataatcagagctcatcaaacaacgggcatgtcacactacttttcaaaatttcttaaat 61709  T
Q  838 agaataaaatactatttattaaa-atcaacttta 870  Q
    |||||| || |||||||| |||| ||||||||||    
T  61708 agaatataaaactatttaataaacatcaacttta 61675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 741 - 870
Target Start/End: Complemental strand, 73696 - 73563
Alignment:
Q  741 tgtaacaccctgttatcccaacaatta--aatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| |||||||||| ||| |  |||| |||||||||||||||||| ||| |||  |||||  |||||| ||| |||||||||||||| |||||    
T  73696 tgtaacaccccgttatcccaaaaatcattaataataaataaaataatcagagttcatcaaacaacggacatgtcacactacttttcaaaatttcttaaat 73597  T
Q  838 agaataaaatactatttattaaa-atcaacttta 870  Q
    |||||| || |||||||| |||| ||||||||||    
T  73596 agaatataaaactatttaataaacatcaacttta 73563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 739 - 905
Target Start/End: Complemental strand, 10113 - 9943
Alignment:
Q  739 actgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttct-aaa 836  Q
    |||||||||||| |||||||||| |||||||||| ||||||| | |||||||| | |||| |||||||| ||||||  || || |||||||||||| |||    
T  10113 actgtaacaccccgttatcccaaacaattaaataataaataata-aatcagagtttaacaccaaacgggcatgtcactctactattcaaaatttcttaaa 10015  T
Q  837 tagaataaaatactatttattaaa-atcaacttt-aaag-ttaaacaatactttgcagcagaatatttttca 905  Q
    ||||||| ||||||||||| |||| ||||||||| | || || | ||| |||||||||| ||||||||||||    
T  10014 tagaatataatactatttaataaacatcaactttgatagtttcaccaaaactttgcagcggaatatttttca 9943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 752 - 860
Target Start/End: Original strand, 25227 - 25337
Alignment:
Q  752 gttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatac 849  Q
    |||||||||| ||||||||||  | |||| |||||||||| ||||||||||||||| |||||| |||| ||||||||||||| |||||||||  ||||||    
T  25227 gttatcccaaacaattaaataacatataatataatcagagttcaacaacaaacgggcatgtcacactgtttttcaaaatttcttaaatagaaataaatac 25326  T
Q  850 tatttattaaa 860  Q
    |||||| ||||    
T  25327 tatttaataaa 25337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 752 - 860
Target Start/End: Original strand, 30729 - 30839
Alignment:
Q  752 gttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatac 849  Q
    |||||||||| ||||||||||  | |||| |||||||||| ||||||||||||||| |||||| |||| ||||||||||||| |||||||||  ||||||    
T  30729 gttatcccaaacaattaaataacatataatataatcagagttcaacaacaaacgggcatgtcacactgtttttcaaaatttcttaaatagaaataaatac 30828  T
Q  850 tatttattaaa 860  Q
    |||||| ||||    
T  30829 tatttaataaa 30839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 766 - 905
Target Start/End: Complemental strand, 2502 - 2363
Alignment:
Q  766 taaatattaaataaaataatcagagctcaacaa-caaacgggtatgtcagactgcttttcaaaatttctaaatagaataaaatactatttattaaaatca 864  Q
    |||||||||||||||  |||||||||||||| | ||| || | |||||| ||||||||| ||| |||||||| |||||||||| ||||||| | ||||||    
T  2502 taaatattaaataaataaatcagagctcaaccatcaatcgagaatgtcacactgctttttaaa-tttctaaacagaataaaatgctatttaat-aaatca 2405  T
Q  865 actttaaagttaaa-caatactttgcagcagaatatttttca 905  Q
    |||| | ||||||| ||| |||||||||| ||||||||||||    
T  2404 acttaatagttaaaccaacactttgcagcggaatatttttca 2363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 870
Target Start/End: Original strand, 4102 - 4233
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgct-tttcaaaatttctaaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | |||||||| | | || |||||||| |||||| |||||| ||||||||||  ||||||    
T  4102 tgtaacaccccgttatcccaaacaattaaatactaaataata-aatcagagtttatcaccaaacgggcatgtcacactgctatttcaaaattcttaaata 4200  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    ||||| ||||||||||| |||| ||||||||||    
T  4201 gaatataatactatttaataaacatcaacttta 4233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 855
Target Start/End: Original strand, 31267 - 31382
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | |||||||| ||| |||  |||||| |||||| |||||||||||||||||| ||||||    
T  31267 tgtaacaccccgttatcccaaacaattaaataataaataata-aatcagagttcatcaaacaacgggcatgtcacactgcttttcaaaatttcttaaata 31365  T
Q  839 gaataaaatactattta 855  Q
    ||||| || ||||||||    
T  31366 gaatataaaactattta 31382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 25613 - 25733
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| ||| |||||| ||||||| | |||||||| ||| |||  |||| | |||||| |||||||||||||||||| ||||||    
T  25613 tgtaacaccccgttatcccaaacaactaaataataaataata-aatcagagttcatcaaacaacgcgcatgtcacactgcttttcaaaatttcttaaata 25711  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  25712 gaatataaaactatttaataaa 25733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 62576 - 62455
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    ||||||||||||||| |||||  ||||||| || |||||||||||||||||| ||| |||  |||||| |||||| ||| |||||||||||||| |||||    
T  62576 tgtaacaccctgttaacccaaaacaattaa-taataaataaaataatcagagttcatcaaacaacgggcatgtcacactacttttcaaaatttcttaaat 62478  T
Q  838 agaataaaatactatttattaaa 860  Q
    |||||| || |||||||| ||||    
T  62477 agaatataaaactatttaataaa 62455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 2982 - 3103
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||| ||| ||||||||||  | |||| |||||||||| |||||||||||| |  |||||| |||| ||||||||||||| ||||||    
T  2982 tgtaacaccccgttatcacaaacaattaaataacatataatataatcagagttcaacaacaaacagacatgtcacactgtttttcaaaatttcttaaata 3081  T
Q  839 gaataaaatactatttattaaa 860  Q
    |||  |||||||||||| ||||    
T  3082 gaaataaatactatttaataaa 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 82067 - 81946
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||  |  |||||||||||||||  |||||||| ||||| |  |||||| ||||||  ||| ||||||||||||| ||||||    
T  82067 tgtaacaccccgttatcccaaatagctaaatattaaataaataaatcagagttcaaccatcaacgggaatgtcacgctgattttcaaaatttcttaaata 81968  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||||||||||| ||||    
T  81967 gaataaaatactatttaataaa 81946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 91262 - 91141
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||||||  |  |||||||||||||||  |||||||| ||||| |  |||||| ||||||  ||| ||||||||||||| ||||||    
T  91262 tgtaacaccccgttatcccaaatagctaaatattaaataaataaatcagagttcaaccatcaacgggaatgtcacgctgattttcaaaatttcttaaata 91163  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||||||||||| ||||    
T  91162 gaataaaatactatttaataaa 91141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 741 - 870
Target Start/End: Original strand, 5277 - 5408
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgct-tttcaaaatttctaaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | |||||||| | | || |||||||  |||||| |||||| ||||||||||  ||||||    
T  5277 tgtaacaccccgttatcccaaacaattaaatactaaataata-aatcagagtttatcaccaaacggacatgtcacactgctatttcaaaattcttaaata 5375  T
Q  839 gaataaaatactatttattaaa-atcaacttta 870  Q
    ||||| ||||||||||| |||| ||||||||||    
T  5376 gaatataatactatttaataaacatcaacttta 5408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 953 - 836
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||| ||||||||  |||||||||||||||||   ||||| | | ||||||||||  |||||| |||||||||||||| ||| ||||||    
T  953 tgtaacaccccgttaacccaacaacgtaaatattaaataaaat---cagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaata 858  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||||||| ||||||||||||    
T  857 gaataaaatgctatttattaaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 798 - 913
Target Start/End: Original strand, 2070 - 2189
Alignment:
Q  798 acaaacgggtatgtcagactgcttttcaaaatttct-aaatagaataaaatactatttattaaaatcaacttt-aaagttaaa-caatactttgcagcag 894  Q
    ||||||||| |||||| | | ||||||||||||||| |||||||| | ||| ||||||||||||||||||||| | || |||| |||||||| |||||||    
T  2070 acaaacgggaatgtcacattacttttcaaaatttctcaaatagaaaagaatgctatttattaaaatcaactttgatagataaatcaatacttcgcagcag 2169  T
Q  895 aatatttttc-atcatttaa 913  Q
    ||| |||||| |||||||||    
T  2170 aatgtttttcaatcatttaa 2189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 20027 - 20147
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | |||||| | |||| | |||||| |||||| ||| |||||||||||||| ||||||    
T  20027 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtttaacacccaacgggcatgtcacactacttttcaaaatttcttaaata 20125  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  20126 gaatataaaactatttaataaa 20147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 860
Target Start/End: Original strand, 8920 - 9029
Alignment:
Q  752 gttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatac 849  Q
    |||||||||| |||||||||| ||||||| | | |||||| | |||| | |||||| |||||| |||  ||||||||||||| ||||||||||| || ||    
T  8920 gttatcccaaacaattaaataataaataataca-tcagagtttaacacccaacgggcatgtcacactaattttcaaaatttcttaaatagaatataaaac 9018  T
Q  850 tatttattaaa 860  Q
    |||||| ||||    
T  9019 tatttaataaa 9029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 860
Target Start/End: Original strand, 12058 - 12178
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| ||||||| || |||||||||| ||||||| | |||||||| | |||| |||||||| |||  | |||||||||||||||||| ||||||    
T  12058 tgtaacaccccgttatcctaaacaattaaataataaataata-aatcagagtttaacaccaaacgggcatgctacactgcttttcaaaatttcttaaata 12156  T
Q  839 gaataaaatactatttattaaa 860  Q
    ||||| || |||||||| ||||    
T  12157 gaatataaaactatttaataaa 12178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 7906 - 7791
Alignment:
Q  741 tgtaacaccctgttatcccaa-caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaata 838  Q
    |||||||||| |||||||||| |||||||||| ||||||| | | ||||||   | || |||||||| |||||| |||||||||||||||||| ||||||    
T  7906 tgtaacaccccgttatcccaaacaattaaataataaataataca-tcagagtatatcaccaaacgggcatgtcacactgcttttcaaaatttcttaaata 7808  T
Q  839 gaataaaatactattta 855  Q
    ||||| || ||||||||    
T  7807 gaatataaaactattta 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 860
Target Start/End: Complemental strand, 4488 - 4395
Alignment:
Q  768 aatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa 860  Q
    |||| ||||||||||||||| || ||| |||  |||||| |||||| |||||||||||||||||| ||||||||||| |  |||||||| ||||    
T  4488 aataataaataaaataatcatagttcatcaaacaacgggcatgtcacactgcttttcaaaatttcttaaatagaatatataactatttaataaa 4395  T

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Target: scaffold0149 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 740 - 860
Target Start/End: Complemental strand, 12424 - 12302
Alignment:
Q  740 ctgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    ||||||||||| ||||||||||  |||||||||| ||||||| | | ||||||   | || |||||||| |||||| | |||||||||||||||| ||||    
T  12424 ctgtaacaccccgttatcccaaatcaattaaataataaataataca-tcagagtatatcaccaaacgggcatgtcacattgcttttcaaaatttcttaaa 12326  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  12325 tagaatataaaactatttaataaa 12302  T

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Target: scaffold0149; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 28817 - 28698
Alignment:
Q  741 tgtaacaccctgttatcccaacaat-taaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaa--tttctaaat 837  Q
    |||||||||| |||| ||||||||  ||| |||||||||||||   |||||   | |||||||  || |||||| ||||||||||||||  ||  |||||    
T  28817 tgtaacaccccgttaacccaacaacgtaattattaaataaaat---cagagtaaatcaacaaaacggaatgtcacactgcttttcaaaaaattcataaat 28721  T
Q  838 agaataaaatactatttattaaa 860  Q
    |||||||||||||||||||||||    
T  28720 agaataaaatactatttattaaa 28698  T

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Target: scaffold0058 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 768 - 870
Target Start/End: Complemental strand, 41239 - 41135
Alignment:
Q  768 aatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaa-atcaa 865  Q
    |||| ||||||||||||| |||| ||| |||  ||| || |||||| ||| |||||||||||||| ||||||||||| || |||||||| |||| |||||    
T  41239 aataataaataaaataattagagttcatcaaacaacaggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaacatcaa 41140  T
Q  866 cttta 870  Q
    |||||    
T  41139 cttta 41135  T

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Target: scaffold1885 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1885
Description:

Target: scaffold1885; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 1123 - 1178
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  1123 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 1178  T

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Target: scaffold0525 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 8043 - 8098
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  8043 actgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaacttt 8098  T

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Target: scaffold0447 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 808 - 862
Target Start/End: Original strand, 13216 - 13271
Alignment:
Q  808 atgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaat 862  Q
    |||||| |||||||||||||| | | ||||||||||||||||||||||||||||||    
T  13216 atgtcacactgcttttcaaaaatccataaatagaataaaatactatttattaaaat 13271  T

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Target: scaffold0383 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 808 - 862
Target Start/End: Original strand, 11211 - 11266
Alignment:
Q  808 atgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaat 862  Q
    |||||| |||||||||||||| | | ||||||||||||||||||||||||||||||    
T  11211 atgtcacactgcttttcaaaaatccataaatagaataaaatactatttattaaaat 11266  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 857
Target Start/End: Original strand, 157841 - 157955
Alignment:
Q  741 tgtaacaccctgttatcccaacaattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatag 839  Q
    |||||||||  ||||||||||||  |||| |||  |||| ||||||||||   ||||||||||||  |||| | |||||||||||||| | | |||||||    
T  157841 tgtaacacctcgttatcccaaca--taaaaatttcataatataatcagagtaaaacaacaaacgga-atgttacactgcttttcaaaaatccataaatag 157937  T
Q  840 aataaaatactatttatt 857  Q
    ||||||||||||||||||    
T  157938 aataaaatactatttatt 157955  T

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Target: scaffold1711 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 800 - 855
Target Start/End: Original strand, 2 - 58
Alignment:
Q  800 aaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactattta 855  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||| || ||||||||    
T  2 aaacgggtatgtcacactacttttcaaaatttcttaaatagaatataaaactattta 58  T

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Target: scaffold0635 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 808 - 859
Target Start/End: Original strand, 6045 - 6097
Alignment:
Q  808 atgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaa 859  Q
    |||||| |||||||||||||| | | |||||||||||||||||||||||||||    
T  6045 atgtcacactgcttttcaaaaatccataaatagaataaaatactatttattaa 6097  T

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Target: scaffold0326 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 6207 - 6085
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| ||||||||||  ||||||||||  ||||| || | |||||| | |||| |||| |||| |||||| ||| |||||||||||||| ||||    
T  6207 tgtaacaccccgttatcccaaaacaattaaataaaaaatataaca-tcagagtttaacaccaaaacgggcatgtcaaactacttttcaaaatttcttaaa 6109  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  6108 tagaatataaaactatttaataaa 6085  T

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Target: scaffold0326; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 860
Target Start/End: Complemental strand, 14109 - 13987
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaa-cgggtatgtcagactgcttttcaaaatttc-taaa 836  Q
    |||||||||| ||||||||||  ||||||||||  ||||| || | |||||| | |||| |||| |||| |||||| ||| |||||||||||||| ||||    
T  14109 tgtaacaccccgttatcccaaaacaattaaataaaaaatataaca-tcagagtttaacaccaaaacgggcatgtcaaactacttttcaaaatttcttaaa 14011  T
Q  837 tagaataaaatactatttattaaa 860  Q
    ||||||| || |||||||| ||||    
T  14010 tagaatataaaactatttaataaa 13987  T

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Target: scaffold0104 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 855
Target Start/End: Complemental strand, 42423 - 42343
Alignment:
Q  776 ataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactattta 855  Q
    |||| ||||| |||| |||| | |||||||| || ||| |||||||||||||||||| |||||||||  ||||||||||||    
T  42423 ataatataataagagttcaaaaccaaacgggcatatcacactgcttttcaaaatttcttaaatagaaataaatactattta 42343  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 799 - 861
Target Start/End: Original strand, 8777 - 8840
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaa 861  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| |||||    
T  8777 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaaa 8840  T

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Target: scaffold0094 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 869
Target Start/End: Original strand, 43878 - 43933
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaacttt 869  Q
    |||||||||||||| | | ||||||||||||| ||||| |||||||||||||||||    
T  43878 actgcttttcaaaaatccataaatagaataaagtactacttattaaaatcaacttt 43933  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 799 - 861
Target Start/End: Complemental strand, 18158 - 18095
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactatttattaaaa 861  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || |||||||| |||||    
T  18158 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactatttaataaaa 18095  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 821 - 870
Target Start/End: Complemental strand, 125687 - 125637
Alignment:
Q  821 tttcaaaatttctaaatagaataaaatactatttattaaa-atcaacttta 870  Q
    ||||||||||  ||||||||||||||||||||||| |||| ||||||||||    
T  125687 tttcaaaattcttaaatagaataaaatactatttaataaacatcaacttta 125637  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 208351 - 208236
Alignment:
Q  741 tgtaacaccctgttatcccaa--caattaaatattaaataaaataatcagagctcaacaacaaacgggtatgtcagactgcttttcaaaatttc-taaat 837  Q
    |||||||||| ||||||||||  |||||||||||||||||| | | ||||||   | |  |||||||| |||||| ||| |||||||||||||| |||||    
T  208351 tgtaacaccccgttatcccaaagcaattaaatattaaataataca-tcagagtatatcc-caaacgggcatgtcacactacttttcaaaatttcttaaat 208254  T
Q  838 agaataaaatactattta 855  Q
    |||||| || ||||||||    
T  208253 agaatataaaactattta 208236  T

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Target: scaffold0609 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 815 - 859
Target Start/End: Original strand, 8887 - 8932
Alignment:
Q  815 actgcttttcaaaatttc-taaatagaataaaatactatttattaa 859  Q
    |||||||||||||| | | |||||||||||||||||||||||||||    
T  8887 actgcttttcaaaaatccataaatagaataaaatactatttattaa 8932  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 799 - 855
Target Start/End: Complemental strand, 56660 - 56603
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactattta 855  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || ||||||||    
T  56660 caaacgggcatgtcacactacttttcaaaatttcttaaatagaatataaaactattta 56603  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 799 - 855
Target Start/End: Original strand, 76166 - 76223
Alignment:
Q  799 caaacgggtatgtcagactgcttttcaaaatttc-taaatagaataaaatactattta 855  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||||| || ||||||||    
T  76166 caaacgggcatgtcacacttcttttcaaaatttcttaaatagaatataaaactattta 76223  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 857
Target Start/End: Complemental strand, 198593 - 198544
Alignment:
Q  808 atgtcagactgcttttcaaaatttctaaatagaataaaatactatttatt 857  Q
    |||||| |||||||||||||| |||  ||||||||||||| |||||||||    
T  198593 atgtcacactgcttttcaaaaattcataatagaataaaatgctatttatt 198544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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