View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2685_high_3 (Length: 362)
Name: NF2685_high_3
Description: NF2685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2685_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 15 - 344
Target Start/End: Complemental strand, 10269285 - 10268956
Alignment:
| Q |
15 |
aaaattagaaggatcaaaatcgtacaattgaaaaagtttgaagtcaaaagtgcaaattaagcctttaaaagttttccttcaaaagtgcaaattttccctt |
114 |
Q |
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| T |
10269285 |
aaaattagaaggatcaaaatcgtacaattgaaaaagtttgaagtcaaaagtgcaaattaagcctttaaaagtttgccttcaaaagtgcaaattttccctt |
10269186 |
T |
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| Q |
115 |
caaaagaaatcacataannnnnnnaaaaaggaaaatacataaattgttatcttgactatgatgaaattttatgggaaattccgaattcgaacatggggca |
214 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
10269185 |
caaaagaaatcacataatttttttaaaaaggaaaatacataaattgttatcttgactgtgatgaaattttatgggaaattccgaattcgaacatggggca |
10269086 |
T |
|
| Q |
215 |
tcataatctcaacccctttaacaacctcaaaaagagatagtaaccaaaatagaatataaggaggaggaataaaatgtgaaacgaacaagtatgcaaccgc |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10269085 |
tcataatctcaacccctttaacaacctcaaaaagagatagtaaccaaaatagaatataaggaggaggaataaaatgtgaaacgaacaagtatgcaaccgc |
10268986 |
T |
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| Q |
315 |
aattgaatacatgtaggcaaacaatgttaa |
344 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
10268985 |
aattgaatacatgtaggcaaacaatgttaa |
10268956 |
T |
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