View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2903-Insertion-5 (Length: 275)

Name: NF2903-Insertion-5
Description: NF2903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2903-Insertion-5
NF2903-Insertion-5
[»] chr8 (47 HSPs)
chr8 (8-235)||(35151736-35151977)
chr8 (86-234)||(1977181-1977329)
chr8 (81-231)||(17499244-17499394)
chr8 (85-235)||(16983417-16983567)
chr8 (85-220)||(32072120-32072255)
chr8 (85-235)||(24055932-24056082)
chr8 (110-217)||(17741552-17741659)
chr8 (100-235)||(34861199-34861329)
chr8 (105-235)||(5979923-5980052)
chr8 (97-220)||(8914806-8914929)
chr8 (109-224)||(9952775-9952890)
chr8 (109-228)||(28413884-28414002)
chr8 (85-235)||(36804846-36804996)
chr8 (110-195)||(8903900-8903985)
chr8 (87-235)||(13407330-13407479)
chr8 (109-225)||(13214542-13214658)
chr8 (85-228)||(11962696-11962838)
chr8 (123-225)||(34952504-34952606)
chr8 (89-235)||(4674937-4675079)
chr8 (95-180)||(17716884-17716969)
chr8 (107-235)||(9193427-9193555)
chr8 (73-235)||(6098784-6098944)
chr8 (86-228)||(7493356-7493503)
chr8 (87-228)||(23685156-23685293)
chr8 (97-226)||(6387596-6387726)
chr8 (73-187)||(9192012-9192126)
chr8 (97-235)||(17915851-17915985)
chr8 (100-228)||(35689518-35689647)
chr8 (109-214)||(43506582-43506687)
chr8 (86-220)||(36629683-36629816)
chr8 (105-195)||(35797438-35797528)
chr8 (87-237)||(45246459-45246609)
chr8 (128-197)||(35819198-35819267)
chr8 (100-180)||(1961320-1961400)
chr8 (153-220)||(14236429-14236496)
chr8 (100-195)||(31301153-31301247)
chr8 (103-225)||(4319750-4319872)
chr8 (86-220)||(41727454-41727588)
chr8 (100-165)||(10868029-10868094)
chr8 (176-228)||(8671063-8671115)
chr8 (176-227)||(5727346-5727397)
chr8 (105-171)||(1423789-1423855)
chr8 (86-132)||(7599532-7599578)
chr8 (85-131)||(13856506-13856552)
chr8 (91-145)||(37489431-37489485)
chr8 (121-225)||(25915088-25915195)
chr8 (85-220)||(45524897-45525033)
[»] chr3 (52 HSPs)
chr3 (85-235)||(20493452-20493602)
chr3 (114-235)||(52123963-52124084)
chr3 (73-231)||(18427161-18427321)
chr3 (85-235)||(28529276-28529424)
chr3 (105-235)||(41451902-41452032)
chr3 (105-235)||(24734748-24734878)
chr3 (100-235)||(37776710-37776845)
chr3 (87-228)||(20791321-20791462)
chr3 (85-235)||(5452069-5452217)
chr3 (87-235)||(14236044-14236192)
chr3 (85-193)||(26310495-26310603)
chr3 (82-228)||(29588747-29588895)
chr3 (100-220)||(46450103-46450224)
chr3 (101-227)||(50156675-50156801)
chr3 (108-225)||(8824996-8825113)
chr3 (96-197)||(19345045-19345146)
chr3 (86-235)||(27243069-27243219)
chr3 (89-189)||(22604587-22604687)
chr3 (100-228)||(46160985-46161113)
chr3 (105-220)||(55452037-55452152)
chr3 (85-235)||(15790377-15790526)
chr3 (86-228)||(48351460-48351602)
chr3 (85-234)||(29755523-29755672)
chr3 (110-225)||(2419481-2419596)
chr3 (142-217)||(24429050-24429125)
chr3 (107-228)||(44844026-44844148)
chr3 (100-220)||(41387599-41387719)
chr3 (123-230)||(38414708-38414815)
chr3 (110-197)||(41607459-41607546)
chr3 (100-220)||(138801-138921)
chr3 (153-225)||(29388611-29388683)
chr3 (153-214)||(10948588-10948649)
chr3 (157-214)||(37285378-37285435)
chr3 (88-225)||(41707457-41707593)
chr3 (86-197)||(50661566-50661678)
chr3 (105-228)||(2009038-2009160)
chr3 (97-235)||(24748916-24749055)
chr3 (85-231)||(46575971-46576118)
chr3 (156-194)||(22856282-22856320)
chr3 (157-228)||(30355142-30355215)
chr3 (157-195)||(49072100-49072138)
chr3 (105-195)||(13809124-13809215)
chr3 (88-131)||(24748933-24748976)
chr3 (105-136)||(46237152-46237183)
chr3 (189-235)||(27243054-27243100)
chr3 (86-132)||(55283167-55283213)
chr3 (86-179)||(7419241-7419334)
chr3 (110-147)||(18722535-18722572)
chr3 (160-237)||(38138587-38138664)
chr3 (143-195)||(742037-742089)
chr3 (157-237)||(39186059-39186139)
chr3 (85-125)||(46156741-46156781)
[»] chr6 (32 HSPs)
chr6 (85-235)||(34905359-34905509)
chr6 (85-237)||(10133163-10133315)
chr6 (96-235)||(16851980-16852119)
chr6 (85-220)||(32122818-32122953)
chr6 (97-235)||(5106333-5106471)
chr6 (87-228)||(21987317-21987458)
chr6 (93-220)||(2675926-2676053)
chr6 (86-220)||(31116146-31116280)
chr6 (109-234)||(32112725-32112850)
chr6 (100-220)||(445856-445976)
chr6 (109-235)||(1392675-1392800)
chr6 (85-235)||(31443982-31444132)
chr6 (100-231)||(17144682-17144813)
chr6 (143-225)||(8441866-8441948)
chr6 (143-225)||(8450670-8450752)
chr6 (104-229)||(12780772-12780897)
chr6 (86-235)||(12753767-12753916)
chr6 (153-235)||(16187441-16187521)
chr6 (153-235)||(16187659-16187739)
chr6 (86-235)||(10060883-10061033)
chr6 (105-235)||(19090221-19090352)
chr6 (105-228)||(32598962-32599085)
chr6 (109-195)||(12784986-12785072)
chr6 (112-197)||(899943-900028)
chr6 (110-161)||(2931609-2931660)
chr6 (81-131)||(373513-373563)
chr6 (82-148)||(12327299-12327365)
chr6 (86-195)||(12690276-12690386)
chr6 (105-195)||(16436108-16436197)
chr6 (105-171)||(35128794-35128860)
chr6 (100-141)||(6531399-6531440)
chr6 (85-130)||(12488156-12488201)
[»] chr4 (54 HSPs)
chr4 (85-235)||(8108979-8109129)
chr4 (86-227)||(50164419-50164560)
chr4 (105-228)||(43771169-43771292)
chr4 (109-235)||(24834625-24834751)
chr4 (89-235)||(39471184-39471330)
chr4 (85-227)||(722180-722322)
chr4 (105-235)||(26361315-26361445)
chr4 (99-227)||(24938430-24938558)
chr4 (105-220)||(33653511-33653626)
chr4 (97-227)||(754595-754725)
chr4 (85-228)||(47009212-47009355)
chr4 (85-228)||(20454563-20454704)
chr4 (100-208)||(46287479-46287587)
chr4 (100-235)||(34129407-34129542)
chr4 (92-214)||(5044568-5044690)
chr4 (85-195)||(50481592-50481702)
chr4 (88-225)||(48339357-48339494)
chr4 (112-228)||(45310962-45311078)
chr4 (104-227)||(22542423-22542546)
chr4 (110-197)||(31250928-31251015)
chr4 (86-235)||(49242194-49242343)
chr4 (86-225)||(45081759-45081898)
chr4 (105-195)||(10169692-10169782)
chr4 (86-235)||(39016687-39016837)
chr4 (85-195)||(49077272-49077382)
chr4 (164-225)||(40991606-40991667)
chr4 (97-228)||(37451027-37451156)
chr4 (104-227)||(38537528-38537654)
chr4 (85-180)||(50571887-50571982)
chr4 (86-196)||(49769850-49769960)
chr4 (100-195)||(20225388-20225483)
chr4 (98-228)||(25719126-25719257)
chr4 (108-186)||(46242000-46242078)
chr4 (109-227)||(52671877-52671995)
chr4 (110-195)||(4138913-4138998)
chr4 (89-201)||(41153239-41153351)
chr4 (157-235)||(5545673-5545752)
chr4 (105-235)||(19447174-19447305)
chr4 (109-199)||(49682834-49682924)
chr4 (82-131)||(16178697-16178746)
chr4 (113-234)||(19937180-19937301)
chr4 (100-228)||(30866945-30867074)
chr4 (175-228)||(37050642-37050695)
chr4 (91-235)||(44832492-44832637)
chr4 (87-139)||(21776948-21777000)
chr4 (100-224)||(29699527-29699650)
chr4 (97-172)||(2088735-2088810)
chr4 (85-136)||(6212734-6212785)
chr4 (100-195)||(38636375-38636470)
chr4 (150-225)||(52279276-52279351)
chr4 (108-202)||(50652376-50652470)
chr4 (159-235)||(11895134-11895211)
chr4 (100-169)||(42862494-42862563)
chr4 (163-235)||(19933483-19933555)
[»] chr7 (57 HSPs)
chr7 (85-227)||(6442188-6442330)
chr7 (85-235)||(22189962-22190112)
chr7 (86-235)||(27949297-27949446)
chr7 (100-235)||(11824109-11824242)
chr7 (88-235)||(27888308-27888455)
chr7 (100-235)||(46517329-46517464)
chr7 (105-235)||(11692222-11692352)
chr7 (109-235)||(25686842-25686968)
chr7 (97-195)||(31502511-31502609)
chr7 (105-227)||(32205119-32205241)
chr7 (100-235)||(33008142-33008274)
chr7 (85-228)||(7775023-7775165)
chr7 (105-220)||(12263458-12263573)
chr7 (124-235)||(6580009-6580120)
chr7 (109-231)||(14795178-14795300)
chr7 (109-231)||(15242170-15242292)
chr7 (107-235)||(32212877-32213004)
chr7 (105-199)||(25092704-25092798)
chr7 (153-235)||(44350809-44350891)
chr7 (153-228)||(27320465-27320540)
chr7 (85-188)||(32605355-32605457)
chr7 (85-226)||(19422850-19422991)
chr7 (87-235)||(24539129-24539278)
chr7 (100-228)||(39254121-39254249)
chr7 (105-195)||(36845569-36845658)
chr7 (157-235)||(48374446-48374524)
chr7 (87-235)||(17749719-17749868)
chr7 (154-224)||(7459435-7459505)
chr7 (88-235)||(25428485-25428633)
chr7 (88-171)||(17354598-17354681)
chr7 (105-172)||(19494409-19494476)
chr7 (72-235)||(19840891-19841057)
chr7 (100-223)||(32178823-32178945)
chr7 (109-235)||(45909503-45909630)
chr7 (157-235)||(46994369-46994448)
chr7 (170-220)||(12167315-12167365)
chr7 (110-235)||(13919828-13919954)
chr7 (93-135)||(45206042-45206084)
chr7 (86-135)||(42274656-42274705)
chr7 (100-235)||(26703446-26703582)
chr7 (95-135)||(28713049-28713089)
chr7 (105-172)||(12271029-12271095)
chr7 (161-227)||(7774944-7775009)
chr7 (85-135)||(44511043-44511093)
chr7 (182-227)||(2911882-2911927)
chr7 (107-228)||(10933979-10934100)
chr7 (182-235)||(20954800-20954853)
chr7 (100-141)||(31874069-31874110)
chr7 (163-220)||(31874117-31874174)
chr7 (182-235)||(38065333-38065386)
chr7 (153-197)||(3855855-3855899)
chr7 (85-133)||(4090086-4090134)
chr7 (100-136)||(8073394-8073430)
chr7 (86-170)||(9111406-9111490)
chr7 (167-235)||(30742547-30742615)
chr7 (167-235)||(36845498-36845566)
chr7 (92-132)||(41508385-41508425)
[»] chr5 (36 HSPs)
chr5 (71-235)||(41105577-41105741)
chr5 (105-235)||(5413741-5413874)
chr5 (109-235)||(28490729-28490855)
chr5 (95-228)||(34384705-34384838)
chr5 (95-235)||(28223783-28223923)
chr5 (87-233)||(30325883-30326029)
chr5 (85-237)||(36337892-36338047)
chr5 (100-220)||(10141998-10142118)
chr5 (72-220)||(25710494-25710642)
chr5 (73-214)||(28434846-28434985)
chr5 (97-235)||(34368395-34368533)
chr5 (105-231)||(41330404-41330530)
chr5 (105-235)||(37455392-37455525)
chr5 (117-228)||(25919266-25919377)
chr5 (85-195)||(10950109-10950219)
chr5 (85-202)||(25630830-25630947)
chr5 (87-237)||(27592457-27592607)
chr5 (110-196)||(31885877-31885963)
chr5 (90-235)||(4714777-4714922)
chr5 (111-195)||(39246657-39246741)
chr5 (85-220)||(17537124-17537259)
chr5 (123-215)||(14553573-14553665)
chr5 (108-235)||(17434857-17434983)
chr5 (157-235)||(28611785-28611863)
chr5 (100-173)||(28155769-28155842)
chr5 (100-220)||(28090251-28090371)
chr5 (105-171)||(13456236-13456302)
chr5 (114-188)||(34480005-34480079)
chr5 (82-170)||(24990906-24990994)
chr5 (156-199)||(4427336-4427379)
chr5 (182-228)||(2935449-2935495)
chr5 (189-235)||(4959287-4959333)
chr5 (85-135)||(43541874-43541924)
chr5 (157-233)||(25002014-25002091)
chr5 (82-170)||(24915075-24915163)
chr5 (100-235)||(42224597-42224733)
[»] chr1 (56 HSPs)
chr1 (76-220)||(29673489-29673633)
chr1 (100-220)||(41958121-41958241)
chr1 (110-224)||(33193098-33193212)
chr1 (87-228)||(19101615-19101756)
chr1 (109-235)||(8741230-8741356)
chr1 (85-235)||(26980269-26980419)
chr1 (86-228)||(41948160-41948302)
chr1 (86-220)||(44271942-44272076)
chr1 (105-235)||(28218053-28218185)
chr1 (82-235)||(32211791-32211944)
chr1 (108-235)||(6133632-6133758)
chr1 (97-228)||(8899049-8899180)
chr1 (109-227)||(10659784-10659901)
chr1 (85-235)||(11987649-11987799)
chr1 (105-235)||(30678918-30679048)
chr1 (105-234)||(2225267-2225396)
chr1 (85-193)||(49730887-49730995)
chr1 (98-228)||(15468256-15468386)
chr1 (107-217)||(31866361-31866470)
chr1 (86-234)||(25543364-25543511)
chr1 (87-228)||(15523235-15523372)
chr1 (87-228)||(15531229-15531366)
chr1 (87-228)||(22540393-22540530)
chr1 (121-226)||(33114030-33114135)
chr1 (105-220)||(931417-931532)
chr1 (105-235)||(15928598-15928726)
chr1 (81-197)||(50539141-50539259)
chr1 (95-228)||(36566929-36567056)
chr1 (110-218)||(45179270-45179378)
chr1 (109-213)||(51732324-51732428)
chr1 (157-228)||(12767342-12767413)
chr1 (100-171)||(41918033-41918104)
chr1 (86-228)||(27570249-27570391)
chr1 (166-220)||(29673678-29673732)
chr1 (86-235)||(32848589-32848739)
chr1 (87-235)||(13114676-13114825)
chr1 (97-210)||(31074751-31074863)
chr1 (88-235)||(11430467-11430614)
chr1 (100-235)||(41095615-41095751)
chr1 (86-228)||(37552965-37553105)
chr1 (85-127)||(39039470-39039512)
chr1 (90-235)||(13388343-13388491)
chr1 (95-228)||(33059907-33060039)
chr1 (153-197)||(3872679-3872723)
chr1 (100-235)||(11135777-11135913)
chr1 (100-139)||(9165340-9165379)
chr1 (181-228)||(21466634-21466681)
chr1 (100-234)||(28109906-28110040)
chr1 (176-235)||(39974207-39974266)
chr1 (109-220)||(35336911-35337018)
chr1 (105-195)||(37525572-37525662)
chr1 (85-130)||(27464656-27464701)
chr1 (107-188)||(46335142-46335223)
chr1 (85-126)||(46792996-46793037)
chr1 (189-233)||(18157049-18157093)
chr1 (110-202)||(39499442-39499534)
[»] chr2 (47 HSPs)
chr2 (100-227)||(26767776-26767903)
chr2 (85-235)||(12989214-12989364)
chr2 (85-235)||(6980127-6980277)
chr2 (97-235)||(9470116-9470253)
chr2 (85-235)||(45554590-45554732)
chr2 (85-228)||(38464186-38464329)
chr2 (105-228)||(30718341-30718463)
chr2 (87-228)||(15884458-15884595)
chr2 (88-235)||(44274260-44274407)
chr2 (100-195)||(18511256-18511351)
chr2 (86-231)||(10981542-10981687)
chr2 (85-217)||(36471863-36471995)
chr2 (85-224)||(37652263-37652402)
chr2 (86-228)||(11539447-11539592)
chr2 (105-234)||(35316409-35316538)
chr2 (85-209)||(16719463-16719587)
chr2 (157-235)||(25238284-25238362)
chr2 (85-220)||(3804607-3804743)
chr2 (86-172)||(15508938-15509024)
chr2 (86-220)||(33678138-33678271)
chr2 (109-195)||(34142186-34142272)
chr2 (104-198)||(45270600-45270694)
chr2 (130-195)||(7919317-7919382)
chr2 (100-197)||(17188103-17188200)
chr2 (100-235)||(32856142-32856277)
chr2 (100-173)||(2476572-2476645)
chr2 (155-228)||(14489553-14489626)
chr2 (101-192)||(43414394-43414485)
chr2 (157-235)||(4552847-4552925)
chr2 (160-206)||(14489676-14489722)
chr2 (88-214)||(24497218-24497344)
chr2 (82-227)||(472178-472323)
chr2 (100-228)||(4964686-4964815)
chr2 (95-136)||(41805882-41805923)
chr2 (105-228)||(24895280-24895404)
chr2 (86-202)||(25730479-25730595)
chr2 (100-235)||(28898043-28898179)
chr2 (88-131)||(37719860-37719903)
chr2 (100-171)||(42182927-42182998)
chr2 (153-195)||(19639184-19639226)
chr2 (153-195)||(19837777-19837819)
chr2 (89-131)||(28898061-28898103)
chr2 (82-128)||(42579771-42579817)
chr2 (176-217)||(80403-80444)
chr2 (85-130)||(11729715-11729760)
chr2 (88-220)||(31395466-31395599)
chr2 (109-209)||(30849284-30849384)
[»] scaffold0018 (1 HSPs)
scaffold0018 (95-235)||(27845-27985)
[»] scaffold0543 (1 HSPs)
scaffold0543 (73-195)||(9675-9797)
[»] scaffold0492 (1 HSPs)
scaffold0492 (73-195)||(11221-11343)
[»] scaffold0204 (1 HSPs)
scaffold0204 (88-225)||(26879-27016)
[»] scaffold0016 (1 HSPs)
scaffold0016 (154-235)||(204715-204796)
[»] scaffold0194 (2 HSPs)
scaffold0194 (159-235)||(8418-8494)
scaffold0194 (95-135)||(8522-8562)
[»] scaffold0886 (1 HSPs)
scaffold0886 (157-214)||(3340-3397)
[»] scaffold0176 (1 HSPs)
scaffold0176 (87-136)||(14972-15021)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 35151977 - 35151736
Alignment:
Q  8 ggaattttacaaggattgtgaccacctttaaagtttagaaaacactaacaaagatgtttatagatgaggaatattagcaacactc--tttttaacact-- 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||      
T  35151977 ggaattttacaaggattgtgaccacctttaaagtttagaaaacactaacaaagatgtttatagatgaggaatactagcaacactcactttttaacactct 35151878  T
Q  104 ----------tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaat 193  Q
              ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||| |||| |||    
T  35151877 ttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgtagacccacaataattcaaactaat 35151778  T
Q  194 aaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    || ||||||  ||||| | |||||||||||||||| ||||||    
T  35151777 aagaaagtgaatattaaatagagtgttcaaaagagagtgttg 35151736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 1977329 - 1977181
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | || |||| |||||| | ||||||||||||||||||||||| || | |||||| || |||||||||||||||||||| ||||||| ||||    
T  1977329 aacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatccacaatgattt 1977230  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgtt 234  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  1977229 aaaccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgtt 1977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 231
Target Start/End: Complemental strand, 17499394 - 17499244
Alignment:
Q  81 ttagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 180  Q
    ||||||||||||| | || ||||   |||||||||||||||||||||| ||||||| || ||||||||  | |||||||||||||||||||| |||||||    
T  17499394 ttagcaacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaat 17499295  T
Q  181 tatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 231  Q
     |||||||||||||| | |||| ||||||||||||||  ||||||||||||    
T  17499294 gatttaaaccaataagagagtgagtattagagagagttgtcaaaagagtgt 17499244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 16983417 - 16983567
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| |||  |||||||||| |||||| | ||||||| |  | ||||||||| ||||||||||||||||||||| |||||| |||    
T  16983417 caacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaattttcaaagtgtagactcacaatgatt 16983516  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| ||||||    
T  16983517 taaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 16983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 32072120 - 32072255
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| |||||||||||||||||||| ||||||||||| || | |||||| || ||||||||| ||||||||||||||||||||||    
T  32072120 caacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaattatt 32072219  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    |||| |||||| | | || | |||||||||||||||    
T  32072220 taaatcaataagagaatgggcattagagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 24056082 - 24055932
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    |||| |||| |||| ||||  |||||||||  |||||||| ||||||||||| || | ||||||    ||||||||||||||||||||||||||||||||    
T  24056082 caacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgtagacccacaattatt 24055983  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| || ||||||| |||||||||||||| ||||||    
T  24055982 taaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 17741659 - 17741552
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 209  Q
    ||||||||||||||||||||||||||| || |||||||| |  |||||||||||||||||||||| | |||  |||||||||||||| || || ||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaagaaatgagtatta 17741560  T
Q  210 gagagagt 217  Q
    ||||||||    
T  17741559 gagagagt 17741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 34861329 - 34861199
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||||||||||||||||||||||||||||| || | ||||||  | |||||||||||||||     |||||||| |||||||||||||| | |    
T  34861329 cactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt-----cccacaataatttaaaccaataagaga 34861235  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||| ||||||| ||| ||||||||||||| ||||||    
T  34861234 gtgagtattagggagggtgttcaaaagagagtgttg 34861199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 5979923 - 5980052
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||| |||||||||| |||||||||||||| || | |||||| || |||||||||||||||||  || ||||||  ||| ||||||||| | |||| |    
T  5979923 actcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaactcacaatggttt-aaccaataagagagtgag 5980021  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||||||| ||||||    
T  5980022 tattagagagagtgttcaaaagagagtgttg 5980052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 8914806 - 8914929
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||| ||||||| ||||||| ||| |||||||||||| || | |||||| || |||| ||||||||||||||||||||||| ||||||||||||||     
T  8914806 taacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataag 8914905  T
Q  197 aaagtgtgtattagagagagtgtt 220  Q
    | |||| ||   ||||||||||||    
T  8914906 agagtgggtgacagagagagtgtt 8914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 9952890 - 9952775
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||||||||||||||||| |||||| || | |||||| |  |||||||||||||||||| ||||||||| |||||||||||||| | | || |||||    
T  9952890 ttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataagataatgagtatt 9952791  T
Q  209 agagagagtgttcaaa 224  Q
      ||||||||||||||    
T  9952790 taagagagtgttcaaa 9952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 28414002 - 28413884
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||| |||||||||||||||||||| || | |||||| |  ||||||||||||||| |||||||| ||| |||||||||||||||| | || |||||    
T  28414002 ttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtatagacccataatgatttaaaccaataaaagaatgagtatt 28413903  T
Q  209 agagagagtgttcaaaagag 228  Q
    || | |||||||||||||||    
T  28413902 ag-gcgagtgttcaaaagag 28413884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 36804996 - 36804846
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | ||| ||| ||| | |||||||||| ||||||||||||||| || |||||||| || ||||||||||||| | || | ||||||| |||    
T  36804996 caacactctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatt 36804897  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| |||||| | |||  |||||||||||| |||| ||||||| ||||||    
T  36804896 taaatcaataagagagtaagtattagagagaatgttgaaaagagagtgttg 36804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 8903900 - 8903985
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||| |||||||||||||||||||| || | ||||||  | |||||||||||||||||||||||||||| ||||||||||||||    
T  8903900 tttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtagacccacaatgatttaaaccaataa 8903985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 13407479 - 13407330
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 185  Q
    ||||||| | ||||||| ||| ||||||||||| |||||||||||||||| || |||||  | || ||| |||||||||||||| |||||||| | ||||    
T  13407479 acactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgattt 13407380  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    || ||||| | | | || || |||||||||||||||||||||| ||||||    
T  13407379 aacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttg 13407330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 13214542 - 13214658
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||| ||| ||||||||||| |  ||||||||  ||||||||||||||||||||||||||||||  | ||||| ||||| | || | |||||    
T  13214542 ttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtatt 13214641  T
Q  209 agagagagtgttcaaaa 225  Q
    || ||||||||||||||    
T  13214642 agggagagtgttcaaaa 13214658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 11962838 - 11962696
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    |||||| || ||||| ||| |||||||||||| || ||||||| |||| ||| || ||||| ||  | |||||||||||||||||||| ||| ||| |||    
T  11962838 caacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtagatcca-aatgatt 11962740  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||||||||||| | ||||||   ||||||||||||||||    
T  11962739 taaaccaataaaaaagcgagtattaacaagagtgttcaaaagag 11962696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 34952504 - 34952606
Alignment:
Q  123 atcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttca 222  Q
    |||||||||||||| || ||||||||||  ||||||||||||  ||||||||| |||| ||||||||||| | |||| |  |||||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgttca 34952603  T
Q  223 aaa 225  Q
    |||    
T  34952604 aaa 34952606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 4674937 - 4675079
Alignment:
Q  89 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 188  Q
    ||||| ||||| ||| ||||||||||| ||||||||||||||    ||||  | |||||| |  || |||||||||||||||| | |||||| |||||||    
T  4674937 actctctttaaaactcactcttttattagatgaaatcaatgt----cctatcactttgtgtgagtttaattttcaaagtgtagtcacacaatgatttaaa 4675032  T
Q  189 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| ||  ||||||| ||||||||||||| || ||||||    
T  4675033 ccaataaaaaaatgaatattagaaagagtgttcaaaatagagtgttg 4675079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 17716884 - 17716969
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 180  Q
    ||||||||| ||  |||||||||||||||||||| ||||||| |||||||| || || || |||||||||||||||||||||||||    
T  17716884 tttaacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtagacccacaat 17716969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 9193427 - 9193555
Alignment:
Q  107 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 206  Q
    ||||||||| |||||||| | ||||||||  |||| ||||||    |||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  9193427 tcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataaaaaaatgtgta 9193526  T
Q  207 ttagagagagtgttcaaaagagtgtgttg 235  Q
    |||  ||  |||| |||||||| ||||||    
T  9193527 ttaatgatcgtgtacaaaagagagtgttg 9193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 6098944 - 6098784
Alignment:
Q  73 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    ||||||| |||| |||||||| | ||||||| ||  |||||| ||||||||| |  |||| ||| || | ||||||    ||||||||||||||||||||    
T  6098944 gaggaatgttagtaacactctctctaacactcacatttttataggatgaaatta--gtatatcccaccactttgtgcatgttcaattttcaaagtgtaga 6098847  T
Q  173 cccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     ||||||| ||||||| |||||| | |||| |||||||||||| |||| ||||||| ||||||    
T  6098846 tccacaataatttaaatcaataagagagtgagtattagagagaatgtttaaaagagagtgttg 6098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 7493503 - 7493356
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaa----tgtatgtcctactattttgtgg-ggattcaattttcaaagtgtagacccacaat 180  Q
    |||||||| | ||||||||| | ||||||||||||||||||     ||| |||| ||| | ||||||  || ||| ||||||||||||||||| ||||||    
T  7493503 aacactctctctaacacttatttttttattggatgaaatcatatattgtgtgtcttaccactttgtgttgggttctattttcaaagtgtagactcacaat 7493404  T
Q  181 tatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
     |||||||||||||| | |||| |||||||| |||||||||| |||||    
T  7493403 gatttaaaccaataagagagtgagtattagaaagagtgttcataagag 7493356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 23685156 - 23685293
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| || | |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||| |||||||||||  | |||| |||||    
T  23685156 acactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgattta 23685255  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||||    ||  |||||||||||||||||||||||||    
T  23685256 aaccaataa----gttagtattagagagagtgttcaaaagag 23685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 6387596 - 6387726
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataa 195  Q
    ||||||| ||||||||||||||| |||||||||||||||| || ||||| || || ||| |||| |||||| || |||||||| |  ||||| |||||||    
T  6387596 taacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatacgacccacattgttttaacccaataa 6387695  T
Q  196 aaaagtgtgtattagagagagtgttcaaaag 226  Q
     | | || || ||||||||||||| ||||||    
T  6387696 gagaatgagtgttagagagagtgtccaaaag 6387726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 9192012 - 9192126
Alignment:
Q  73 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    |||||||  |||||||||||  ||||| ||||||||||| || |||| |||||||||||| ||| || | |||||| || ||||||||| ||| ||||||    
T  9192012 gaggaatgctagcaacactcactttaatacttactctttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtaga 9192111  T
Q  173 cccacaattatttaa 187  Q
    | |||||| ||||||    
T  9192112 ctcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 17915851 - 17915985
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||||||||||||||| ||| |||  || | ||||||||| ||||||||  | || ||||||||||||    ||  ||||| |||||||| |||||     
T  17915851 taacacttactcttttattagataaaaataacgaatgtcctaccattttgtgttggtttaattttcaaagt----acttacaatgatttaaactaataat 17915946  T
Q  197 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||| ||||||||||||||||| |||| || ||||||    
T  17915947 aaagtgagtattagagagagtgtttaaaaaagagtgttg 17915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 35689518 - 35689647
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt-agacccacaattatttaaaccaataaaaa 198  Q
    |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| ||||||||||||| || |||||| |  ||| | ||||||||||    
T  35689518 cactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaagtcccacattgttttcacccaataaaaa 35689617  T
Q  199 agtgtgtattagagagagtgttcaaaagag 228  Q
    |||| ||  ||||||||||| |||||||||    
T  35689618 agtgagtgctagagagagtgctcaaaagag 35689647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 43506582 - 43506687
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||  ||||||||||||| | || | |||||| || ||| | |||||| ||||||||||||||| |||||| ||||||| | |||| |||||    
T  43506582 ttttattggatataatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtagacccacaatgatttaagccaataagagagtgagtatt 43506681  T
Q  209 agagag 214  Q
    ||||||    
T  43506682 agagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 36629683 - 36629816
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||| | |||| |||||||||||||||| |||||||| |||||||||  ||  | | ||||||  ||| |||| ||| |||||||||| |||| || |    
T  36629683 aacactatctttagcacttactcttttattagatgaaataaatgtatgtattatcactgtgtggg--ttctatttccaatgtgtagacccgcaatgatct 36629780  T
Q  186 aaaccaat-aaaaaagtgtgtattagagagagtgtt 220  Q
    |||||||| |||||| || |||||||||||||||||    
T  36629781 aaaccaataaaaaaaatgagtattagagagagtgtt 36629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 35797438 - 35797528
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||||||||||| |||||||||||||| | || | |||||| |  ||||||||| |||||||| | ||||||| ||||||| ||||||    
T  35797438 actcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaataa 35797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 45246459 - 45246609
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| ||||||||||| |||||||||||||||  || | ||| || |  ||| |||| ||||||||||| |  |||| |||||    
T  45246459 acactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 45246558  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 237  Q
    || |||||| | || | ||||  |||||||| |||||||||| ||||||||    
T  45246559 aatcaataagagagggggtataggagagagtattcaaaagagagtgttgat 45246609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 35819198 - 35819267
Alignment:
Q  128 tgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    ||||||||| || |||||||| ||  |||||||||||||| |||||||||||| |||||||| |||||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataaaa 35819267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 1961320 - 1961400
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 180  Q
    |||||| ||||||||||||| ||||||| ||| |||| || | |||| | || |||||||||||||||||||||| |||||    
T  1961320 cacttaatcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtagaccaacaat 1961400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 14236429 - 14236496
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||||| ||||||||| | |||||| ||||||||||| || | |||| |||||||||||||||||    
T  14236429 ttcaattttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 31301153 - 31301247
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||| |||||||||||||||||||||||||||||| | || | |||||| |  ||| |||||||| |||||||  || ||| ||||||||||||||    
T  31301153 cactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga-tcataataatttaaaccaataa 31301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 4319872 - 4319750
Alignment:
Q  103 ttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtg 202  Q
    ||||| ||||||| ||| ||||||||| |||||  |  | |||||| | ||| ||||||||||||||||||| ||| | ||||||| |||||||||| ||    
T  4319872 ttacttttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagtgtagacctacactaatttaaatcaataaaaaaatg 4319773  T
Q  203 tgtattagagagagtgttcaaaa 225  Q
      | ||||||||| |||| ||||    
T  4319772 aatgttagagagaatgttaaaaa 4319750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 41727454 - 41727588
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| |||| || | |||||||| || ||| |||||||||||||||| ||   ||||||  | |||  |||| || |||||||| || ||| ||||    
T  41727454 aacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgtagactcataatgattt 41727553  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||| || | |||| |||||||||||||||||    
T  41727554 aaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 10868029 - 10868094
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaa 165  Q
    |||||| | |||||||||||||| |||||||||||   || |||||||| ||||||||||||||||    
T  10868029 cacttatttttttattggatgaactcaatgtatgtttcaccattttgtgtggattcaattttcaaa 10868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 8671063 - 8671115
Alignment:
Q  176 acaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||| ||||||| ||||||| |||| ||||||||||||| |||||||||||    
T  8671063 acaattctttaaactaataaaatagtgagtattagagagagcgttcaaaagag 8671115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 5727346 - 5727397
Alignment:
Q  176 acaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    ||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||    
T  5727346 acaatgatttaaaccaataaaaaagtgagtactagagagggtgtttaaaaga 5727397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 1423789 - 1423855
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    ||||||||||| ||| |||||||||||||||| || | |||||  |  |||||||||||||||||||    
T  1423789 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 1423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 7599578 - 7599532
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtat 132  Q
    |||||||| | || ||| |||||||||||||||||||||||||||||    
T  7599578 aacactctctctagcacctactcttttattggatgaaatcaatgtat 7599532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 13856552 - 13856506
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgta 131  Q
    ||||||||| | ||||||  |||||||||||||||||||||||||||    
T  13856552 caacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 37489485 - 37489431
Alignment:
Q  91 tctttttaacacttactcttttattggatgaaatcaatgtatgtcctactatttt 145  Q
    ||||| ||||| ||| | |||||||||||||||||| |||||||||||| |||||    
T  37489485 tctttctaacatttatttttttattggatgaaatcattgtatgtcctacaatttt 37489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 25915088 - 25915195
Alignment:
Q  121 aaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga---cccacaattatttaaaccaataaaaaagtgtgtattagagagagt 217  Q
    ||||||||||||||||||||| ||| |  || ||| ||||||||||||||||    ||||| | |||| | ||||||||| |||| ||| ||| ||||||    
T  25915088 aaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagtactagggagagt 25915187  T
Q  218 gttcaaaa 225  Q
    ||| ||||    
T  25915188 gttaaaaa 25915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 220
Target Start/End: Complemental strand, 45525033 - 45524897
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt-agacccacaattat 183  Q
    ||||||||| || |||||| | | | ||||||||| ||||||||||||| || || | |||| | |||  | |||| |||||||| | |||||| || ||    
T  45525033 caacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttgagtggaacccatttccaaagtgtgaaacccaccatgat 45524934  T
Q  184 ttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    |||| ||||| |||||||| || || |||||||||||    
T  45524933 ttaagccaattaaaaagtgagtgttggagagagtgtt 45524897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 20493602 - 20493452
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||||||||||||||||| |||    
T  20493602 caacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgtagacccacaatgatt 20493503  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| ||| ||||||||||||||||||||| ||||||    
T  20493502 taaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 52124084 - 52123963
Alignment:
Q  114 ttggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagaga 213  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  52124084 ttggatgaaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagaga 52123985  T
Q  214 gagtgttcaaaagagtgtgttg 235  Q
    ||||||||||||||| ||||||    
T  52123984 gagtgttcaaaagagagtgttg 52123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 18427321 - 18427161
Alignment:
Q  73 gaggaatattagcaacactcttttt--aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 170  Q
    |||||||  ||||||||||| ||||  |||||| |||| ||||||||||||||||||||||||||| || |||||||| || ||| ||||||||||||||    
T  18427321 gaggaatgctagcaacactcatttttcaacactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgta 18427222  T
Q  171 gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 231  Q
    |||||||||| |||||||||||||| | |||| ||||||||||| |||||||| |||||||    
T  18427221 gacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaagagagtgt 18427161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 28529276 - 28529424
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| |||||||||||||||||||||||||||||||| || | | ||||||  |||||||||||||||||||||||||||| |||    
T  28529276 caacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtggg--ttcaattttcaaagtgtagacccacaatgatt 28529373  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||| ||||||    
T  28529374 taaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 41452032 - 41451902
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||||||||||||||| |||||||| || | |||||| || |||||||||||||| ||||||||||||| |||||||||||||| | |||| |    
T  41452032 actcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtagacccacaatgatttaaaccaataagagagtgag 41451933  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||||||| ||||||    
T  41451932 tattagagagagtgttcaaaagagagtgttg 41451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 24734748 - 24734878
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||||||||||||||| |||||||| || | |||||| || |||||||||||||| |||| |||||||| |||||||||||||| | |||| |    
T  24734748 actcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtaggcccacaatgatttaaaccaataagagagtgag 24734847  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||||||| ||||||    
T  24734848 tattagagagagtgttcaaaagagagtgttg 24734878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 37776845 - 37776710
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| ||||||||||| ||||||||||||||||||||||| | |||||| || |||||||||||||||||||||| ||||| |||||||||| ||| | |    
T  37776845 cactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacctacaatgatttaaaccactaagaga 37776746  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||| ||||||||||| ||||||| || || ||||||    
T  37776745 gtgagtattagagagggtgttcataaaagagtgttg 37776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 20791321 - 20791462
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||| ||||||||||| || |||| |||||    
T  20791321 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 20791420  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  20791421 aaccaataagaaagtgagtattagagagagtgttcaaaagag 20791462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 5452217 - 5452069
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||| ||| || | |||||| ||||||||||||| |||||||||||  |||  |||    
T  5452217 caacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgtagacc--caaggatt 5452120  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| |||||| | || | ||||| ||||||||||||||||||| ||||||    
T  5452119 taaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttg 5452069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 14236044 - 14236192
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||| ||||||| || | ||| || |  ||| |||| ||||||||||| ||||||| |||||    
T  14236044 acactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataattta 14236143  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     ||||||||||||||| |||||||| ||||||||||||| || ||||||    
T  14236144 gaccaataaaaaagtgagtattagaaagagtgttcaaaacagagtgttg 14236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 26310603 - 26310495
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || ||||||||||||||||||||||||||||||||||||| || ||||| ||  | |||||||||||||||||||||||| ||| |||    
T  26310603 caacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatt 26310504  T
Q  185 taaaccaat 193  Q
    |||||||||    
T  26310503 taaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 29588895 - 29588747
Alignment:
Q  82 tagcaacactc--tttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaa 179  Q
    |||||||||||  |||| ||||| | |||||||||||||| |||||||||||||||||   | ||| || |  |||||||||||||||||||||||||||    
T  29588895 tagcaacactcacttttcaacacctgctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaa 29588796  T
Q  180 ttatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    | ||||||| |||||| | |||| || ||| ||||||||||||||||||    
T  29588795 tgatttaaatcaataagagagtgagtgttatagagagtgttcaaaagag 29588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 46450103 - 46450224
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctacta-ttttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaa 198  Q
    |||| ||||||||||| |||| ||||||||||||||| || | ||||||| || ||| |||| ||||||||||||||||||| |||||||||||||| |     
T  46450103 cactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtagacccacaatgatttaaaccaataagag 46450202  T
Q  199 agtgtgtattagagagagtgtt 220  Q
    |||| |||||||||||||||||    
T  46450203 agtgagtattagagagagtgtt 46450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 50156801 - 50156675
Alignment:
Q  101 acttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaag 200  Q
    |||||||  ||||||| ||||||| ||||||||| | || | |||| |||| ||||||||| |||||||||||||||||| |||||||||||||| | ||    
T  50156801 acttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtagacccacaatgatttaaaccaataagagag 50156702  T
Q  201 tgtgtattagagagagtgttcaaaaga 227  Q
    || |||||| | |||||||||||||||    
T  50156701 tgagtattacaaagagtgttcaaaaga 50156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 8825113 - 8824996
Alignment:
Q  108 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtat 207  Q
    |||||||| |||||||||||| ||||||| || ||||| || || ||||||||||||||| || || |||||| |||||||||||||| | |||| ||||    
T  8825113 cttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaaccaataagagagtgagtat 8825014  T
Q  208 tagagagagtgttcaaaa 225  Q
    || |||||||||||||||    
T  8825013 taaagagagtgttcaaaa 8824996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 19345146 - 19345045
Alignment:
Q  96 ttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||||||| |  ||||||||||||||||||||||||||| || | ||||| ||| ||||||||||||| ||||||| |||||| ||||||||||||||    
T  19345146 ttaacacttatttatttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataa 19345047  T
Q  196 aa 197  Q
    ||    
T  19345046 aa 19345045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 27243069 - 27243219
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatt 184  Q
    |||||||| | ||||||| ||||||||||||||| ||||||||| |||||| || | ||| || || ||| |||| ||||||||| |||||||| | |||    
T  27243069 aacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgatt 27243168  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||| ||||| | | |||| |||||||| |||||||||||||||| ||||||    
T  27243169 taacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttg 27243219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 22604587 - 22604687
Alignment:
Q  89 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 188  Q
    ||||| ||||||||| |||| |||||||||| |||| ||||||||||| || ||||||||||  ||||||||||||| ||||||| |||||| |||||||    
T  22604587 actctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaa 22604686  T
Q  189 c 189  Q
    |    
T  22604687 c 22604687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 46160985 - 46161113
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| ||||||||||||||||||||||||  |||||| || | ||||||  | ||| |||| ||||||||||| ||| ||| |||||||||||||| | |    
T  46160985 cactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtagatccataatgatttaaaccaataagaga 46161084  T
Q  200 gtgtgtattagagagagtgttcaaaagag 228  Q
    ||| |||||||||||||||| ||| ||||    
T  46161085 gtgagtattagagagagtgtccaagagag 46161113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 55452152 - 55452037
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||| |||  |||||||||| || | |||||| || ||| |||| |||||||||||| || ||| |||||||||||| ||| |||| |    
T  55452152 actcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagactcataatgatttaaaccaatgaaagagtgag 55452053  T
Q  205 tattagagagagtgtt 220  Q
    ||||||||||||||||    
T  55452052 tattagagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 15790526 - 15790377
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||| ||| |||||||||||  |||||||||| |||||||||||||||  || ||||| ||| |   |||||||||||||||||  ||| ||| |||    
T  15790526 caacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtag-gccataatgatt 15790428  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| |||||||||||| | ||||||| || ||||||    
T  15790427 taaaccaataagagagtgagtattagagagattattcaaaaaagagtgttg 15790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 48351460 - 48351602
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| ||||| ||  ||||||||||||||| |||||||| ||||||  |||| |||||| || |||||||||||||||||| | ||| ||| ||||    
T  48351460 aacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtatatccataatgattt 48351559  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||| |||||| | |  | |||||||||| | ||||||||||||    
T  48351560 aaatcaataagagaaagagtattagagaaaatgttcaaaagag 48351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 29755523 - 29755672
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||| ||| ||||||||  |||||||||| | ||  ||||||| |||||   |||| |||||| || |||||||||||||||||||| | ||||| |||    
T  29755523 caacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaattttcaaagtgtagatcaacaatgatt 29755622  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgtt 234  Q
    ||||||||||| |  ||  ||||||||| ||||||||||||||| |||||    
T  29755623 taaaccaataagagggtaggtattagagggagtgttcaaaagagagtgtt 29755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 2419596 - 2419481
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 209  Q
    ||||||||||| |||||||| ||||||||| | ||||   |  ||| |||| ||| ||||||||||||||| |||||||||||||| |||||| ||||||    
T  2419596 tttattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtatta 2419497  T
Q  210 gagagagtgttcaaaa 225  Q
     ||| |||||||||||    
T  2419496 aagaaagtgttcaaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 24429125 - 24429050
Alignment:
Q  142 ttttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagt 217  Q
    ||||||| || ||||||||| |||||||||| ||||||| |||||||||||||||| |||| ||||||||||||||    
T  24429125 ttttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagagt 24429050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 44844026 - 44844148
Alignment:
Q  107 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgt 205  Q
    |||||||||| || |||| ||||||||||| || ||||  || |  ||||||||| |||||||| |||||||||| |||||| |||||||||||||| ||    
T  44844026 tcttttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagt 44844125  T
Q  206 attagagagagtgttcaaaagag 228  Q
     |||||||||||||  |||||||    
T  44844126 gttagagagagtgtcaaaaagag 44844148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 41387599 - 41387719
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||| |||||||||| ||||| |||||| ||  ||||||||||| || || ||||||||||||| ||||||||||| |||||| | ||||| | |    
T  41387599 cactcactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaaagtgcagacccacaatgatttaatcaaataagaga 41387698  T
Q  200 gtgtgtattagagagagtgtt 220  Q
     || ||||| |||||||||||    
T  41387699 ttgagtattggagagagtgtt 41387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 38414708 - 38414815
Alignment:
Q  123 atcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttca 222  Q
    |||||||||||||| || |||||||| || || |||||| |||||||||| |||| || |||||||||||||| | |||| || ||| ||||| || |||    
T  38414708 atcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagagaatgctca 38414807  T
Q  223 aaagagtg 230  Q
    ||||||||    
T  38414808 aaagagtg 38414815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 41607459 - 41607546
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    ||||||||||| ||||||| ||||||  ||||||||||| |  || ||||||||||||||||| ||||| ||||||||| ||||||||    
T  41607459 tttattggatgtaatcaatatatgtctcactattttgtgtgagtttaattttcaaagtgtagatccacagttatttaaatcaataaaa 41607546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 138801 - 138921
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||||||||| ||||||||||||||||||  || |||||||  | |||||||||| ||| |||| ||  ||||| ||||||| |||||||| |    
T  138801 cactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatcaataaaaga 138900  T
Q  200 gtgtgtattagagagagtgtt 220  Q
    ||  |||||| |||| |||||    
T  138901 gtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 29388683 - 29388611
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    ||||||||||||||||||||| |||||| ||||||  |||||| | |||| || |||||||||||||||||||    
T  29388683 ttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttcaaaa 29388611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 10948649 - 10948588
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagag 214  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||| |||| |||||| ||||    
T  10948649 ttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 37285378 - 37285435
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagag 214  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||  |||||||||||    
T  37285378 atttttaaagtgcagacccacaataatttaaaccaataaaaaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 41707593 - 41707457
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 187  Q
    |||||| | ||||||| ||||| | ||||||| ||||||||||||||   |  | |||||| || ||||||||| ||||| |||||||||||| ||||||    
T  41707593 cactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagacccacaataatttaa 41707494  T
Q  188 accaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    ||| |||| ||| |  || ||| |||||||||||||||    
T  41707493 acc-ataagaaaataagtgttaaagagagtgttcaaaa 41707457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 50661678 - 50661566
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatt 184  Q
    |||||||| | ||||||||||||||||||| ||| ||||||||| |||||| || | ||| || || ||| |||| |||| |||| |||||||| | |||    
T  50661678 aacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatt 50661579  T
Q  185 taaaccaataaaa 197  Q
    ||| |||||||||    
T  50661578 taacccaataaaa 50661566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 2009038 - 2009160
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||  |||||||| ||||||||||| || | ||| ||  | |||| |||| ||||||||||| |||||| ||||||| |||||||||| ||      
T  2009038 actcttttatcagatgaaattaatgtatgtcc-accactttatgtagtttcagtttttaaagtgtagactcacaataatttaaatcaataaaaaaatgaa 2009136  T
Q  205 tattagagagagtgttcaaaagag 228  Q
    ||||||||||  |||| |||||||    
T  2009137 tattagagaggatgtttaaaagag 2009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 24749055 - 24748916
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataa 195  Q
    ||||||| | |||||||| || ||| |||||||||||||| || ||||| || || ||| ||||  |||||||||  || ||| | |||| | |||||||    
T  24749055 taacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatccaataa 24748956  T
Q  196 aaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    || |||| || |||||||||||| ||||||||| ||||||    
T  24748955 aagagtgagtgttagagagagtgctcaaaagagagtgttg 24748916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 46575971 - 46576118
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattat 183  Q
    ||||||||| |  |||||| ||||| ||||||| ||||| |||||||||||| || | ||| || || ||| ||||||||| |||| | |||||| | ||    
T  46575971 caacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgtacgccccacattgat 46576070  T
Q  184 ttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 231  Q
    |||| || || | | |||| |||||| |||||||||| ||||||||||    
T  46576071 ttaaccctattagagagtgagtattaaagagagtgttgaaaagagtgt 46576118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 22856320 - 22856282
Alignment:
Q  156 aattttcaaagtgtagacccacaattatttaaaccaata 194  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  22856320 aattttcaaagtgtagatccacaattatttaaaccaata 22856282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 30355215 - 30355142
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt--gtattagagagagtgttcaaaagag 228  Q
    ||||||||| |||| |  |||||| |||||||| |||||||||||||  |||||||||||| ||||||||||||    
T  30355215 attttcaaaatgtatattcacaatgatttaaactaataaaaaagtgtgagtattagagagaatgttcaaaagag 30355142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 49072100 - 49072138
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49072100 attttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 13809124 - 13809215
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataa 195  Q
    ||||||||||||||| |||||||||||||||| || ||||| || || ||| |||| |||||| || |||||||| |  ||||| |||||||    
T  13809124 actcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatatgacccacattgttttaacccaataa 13809215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 24748933 - 24748976
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgta 131  Q
    |||||| | ||||||| |||||||||||||||||||||||||||    
T  24748933 cactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 136
Target Start/End: Complemental strand, 46237183 - 46237152
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcc 136  Q
    ||||||||||||||||||||||||||||||||    
T  46237183 actcttttattggatgaaatcaatgtatgtcc 46237152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 27243100 - 27243054
Alignment:
Q  189 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||| |||| || |||||||||||||||||||||| ||||||    
T  27243100 ccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttg 27243054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 55283213 - 55283167
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtat 132  Q
    |||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  55283213 aacactctctttaacacttattctattattggataaaatcaatgtat 55283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 7419334 - 7419241
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaa 179  Q
    |||||||| | || |||| ||||||||||| ||| |||| ||| |||||||  |||||||||| |  ||| |||| ||||||||||| ||||||    
T  7419334 aacactctatgtagcactcactcttttattagataaaataaatatatgtccctctattttgtgtgagttctatttccaaagtgtagatccacaa 7419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 18722572 - 18722535
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgt 147  Q
    ||||||||||||||||||||||||||| || |||||||    
T  18722572 tttattggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 38138664 - 38138587
Alignment:
Q  160 ttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 237  Q
    |||||||| |||| ||||||| |||||||||||||| | |||  |||||| | | |||| ||||||||| ||||||||    
T  38138664 ttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaataaagtgatcaaaagagagtgttgat 38138587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 742037 - 742089
Alignment:
Q  143 tttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||| |||||| ||||  |||||||||||||||||| |||||||| |||||    
T  742037 tttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataa 742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 39186059 - 39186139
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 237  Q
    |||| ||||||||||| |  |||| ||||||| |||||| | || | ||||| |||||||| |||||||||| ||||||||    
T  39186059 atttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaagagagtgttgat 39186139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 46156781 - 46156741
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatc 125  Q
    ||||||||| ||||||||| ||||||||||||| |||||||    
T  46156781 caacactctctttaacactcactcttttattgggtgaaatc 46156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 34905359 - 34905509
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||| || | |||||  || |||||||||||||||||||||||||||| |||    
T  34905359 caacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatt 34905458  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||| ||||||    
T  34905459 taaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 34905509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 10133315 - 10133163
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | ||||||| |||| ||||||||||||||| | ||||||||| || | ||| ||||| |||||||||||||||||||| ||||||| |||    
T  10133315 caacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtagaaccacaatgatt 10133216  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 237  Q
    ||||||||||||| |||| |||||| || |||| |||||||||| ||||||||    
T  10133215 taaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttgat 10133163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 235
Target Start/End: Complemental strand, 16852119 - 16851980
Alignment:
Q  96 ttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||||||| |  |||||| |||||||| ||||||||||| || | ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  16852119 ttaacacttatttatttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataa 16852020  T
Q  196 aaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     | |||| ||||||| |||  |||||||||||| ||||||    
T  16852019 gagagtgggtattagggaggatgttcaaaagagagtgttg 16851980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 32122818 - 32122953
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    |||||||||||  | |||| |||  ||||||||||||||||||| ||||||| || ||||||||||  |||||||||||||||||||||||||||| |||    
T  32122818 caacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatt 32122917  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||| ||||||||||||||  || |||||| ||||||    
T  32122918 taagccaataaaaaagtgaataatagagatagtgtt 32122953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 5106333 - 5106471
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||| ||| ||||||||||| |||||||||||||||| || | |||||| ||  ||||||||||||||||| ||||||||  ||||||||||||||     
T  5106333 taacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataat 5106432  T
Q  197 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | ||||  |||||||||| ||||||||||||| ||||||    
T  5106433 agagtgaatattagagagtgtgttcaaaagagggtgttg 5106471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 21987317 - 21987458
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||| ||| || | ||| || |  ||| |||| ||||||||||| || |||| |||||    
T  21987317 acactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 21987416  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  21987417 aaccaataagaaagtgagtattagagagagtgttcaaaagag 21987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 2675926 - 2676053
Alignment:
Q  93 tttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaa 192  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||| || | |||||   | || |||||||||| ||||||||||||||  ||||||||||    
T  2675926 tttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaa 2676025  T
Q  193 taaaaaagtgtgtattagagagagtgtt 220  Q
    |||||||||| |||||||||||||||||    
T  2676026 taaaaaagtgagtattagagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 31116280 - 31116146
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | ||||| | |||||| ||||||||||||||||||||||||| |||| |||||| |  ||| |||| ||| ||||| ||||||||| ||||    
T  31116280 aacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgattt 31116181  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    |||||||||| | |||| |||||||||||||||||    
T  31116180 aaaccaataagagagtgagtattagagagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 32112850 - 32112725
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||||||||||||||||| |||||  || |||||||| || ||  |||||||||||||||| ||||||| ||||||| |||||| | ||||  ||||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  209 agagagagtgttcaaaagagtgtgtt 234  Q
    ||||||| |||||||||||| |||||    
T  32112750 agagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 445856 - 445976
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| ||| |||||||||||||||||||||||||||  || | |||||| || ||||||||||||||| ||||  |||||| |||||||||||||| | |    
T  445856 cactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagtcacaatgatttaaaccaataagaga 445955  T
Q  200 gtgtgtattagagagagtgtt 220  Q
     || |||||||||||||||||    
T  445956 atgagtattagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 1392675 - 1392800
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||||||||||||||||||  |||| |||||  |  ||||||||| ||| ||||| |||||||| |||||||||||||| | |||| |||||    
T  1392675 ttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtatt 1392773  T
Q  209 agagagagtgttcaaaagagtgtgttg 235  Q
    ||| || ||||||||||||| ||||||    
T  1392774 agatagggtgttcaaaagagagtgttg 1392800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 31443982 - 31444132
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||||||||||||| | |||||||||||||||||| ||| ||||| | || ||||||||  | ||||||||||||||||| ||| |||||  |||    
T  31443982 caacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgttgactcacaaggatt 31444081  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||  ||| || | |||  ||||||||||| ||||||| |||| ||||||    
T  31444082 taaattaatgaacacgtgaatattagagagaatgttcaagagagagtgttg 31444132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 17144813 - 17144682
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||||| |||||||| ||||||||||| ||||| | ||  |||||||  | || ||||||||||||||||||||||||| |||||||| ||||||  |    
T  17144813 cacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaactaataaagga 17144714  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgt 231  Q
    ||  |||||| |||||||| | ||||||||||    
T  17144713 gtaagtattaaagagagtggttaaaagagtgt 17144682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 8441948 - 8441866
Alignment:
Q  143 tttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    ||||||||  ||||||||||||||||||||||  |||| || ||||||||||||| |||| ||||||||||||||||||||||    
T  8441948 tttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaa 8441866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 8450752 - 8450670
Alignment:
Q  143 tttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    ||||||||  ||||||||||||||||||||||  |||| || ||||||||||||| |||| ||||||||||||||||||||||    
T  8450752 tttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaa 8450670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 229
Target Start/End: Complemental strand, 12780897 - 12780772
Alignment:
Q  104 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt 203  Q
    |||| ||||||| | || ||||||||||||||  |||| ||||||  | |||||||||||||||||||| ||||||| ||||||||||||||   | ||     
T  12780897 tacttttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatga 12780798  T
Q  204 gtattagagagagtgttcaaaagagt 229  Q
     |||||||||| ||||||||||||||    
T  12780797 atattagagagggtgttcaaaagagt 12780772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 12753916 - 12753767
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||||| || || | ||||||| ||||||| ||||  ||| |||||| || | |||||| || ||| |||||||  ||||| || |||||| ||||    
T  12753916 aacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctattttcagggtgtacactcacaatgattt 12753817  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||||||| || | ||||||||||||||||| ||||||| ||||||    
T  12753816 aaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttg 12753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 16187521 - 16187441
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||   |||| |||||||  |||||||| ||||||| ||||||    
T  16187521 ttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--agagtgttgaaaagagagtgttg 16187441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 16187739 - 16187659
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||   |||| |||||||  |||||||| ||||||| ||||||    
T  16187739 ttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--agagtgttgaaaagagagtgttg 16187659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 10060883 - 10061033
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatt 184  Q
    |||||||||| ||||| | |||||||||||   ||||||||||||||||||  | | ||| || || ||| |||||||||||||||  || ||| | ||     
T  10060883 aacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccattttcaaagtgtaggtcctacattgatc 10060982  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | | |||||||||||||| || |||||||||||| ||||||||| ||||||    
T  10060983 tcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttg 10061033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 19090352 - 19090221
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataaaaaagtgt 203  Q
    ||||||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||||  || ||| | | || ||||||||||| ||||     
T  19090352 actcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtga 19090253  T
Q  204 gtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||  ||||||||||| ||||||||| ||||||    
T  19090252 gtgctagagagagtgctcaaaagagagtgttg 19090221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 32599085 - 32598962
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||| |||  ||||||||||  | | |||||| || | | |||| |||||||||||  |||||| ||||||| |||||||| |||| |    
T  32599085 actcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtgag 32598986  T
Q  205 tattagagagagtgttcaaaagag 228  Q
    ||||| ||||| |||| |||||||    
T  32598985 tattaaagagaatgtttaaaagag 32598962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 12785072 - 12784986
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||||| || |||||||||||||| ||||| ||| ||    |||||||||||||||||||| ||| ||| ||||||||||||||    
T  12785072 ttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataa 12784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 899943 - 900028
Alignment:
Q  112 tattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    ||||||||||||||||  ||||| | ||||||||  |||| ||||||||||| | | |||||||||||| | ||||||||||||||    
T  899943 tattggatgaaatcaacatatgttccactattttacgggggttcaattttcataatatagacccacaatgaattaaaccaataaaa 900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 2931609 - 2931660
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaatttt 161  Q
    |||||| ||||||||||||||||||||||| ||||||||| | |||||||||    
T  2931609 tttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 373563 - 373513
Alignment:
Q  81 ttagcaacactctttttaacacttactcttttattggatgaaatcaatgta 131  Q
    ||||||||||||| | ||||||||||| ||||||||||| |||||||||||    
T  373563 ttagcaacactctctctaacacttactattttattggataaaatcaatgta 373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 12327365 - 12327299
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtg 148  Q
    |||||||||||| | || || | |||||||||||||||  |||||||||||||||||| ||||||||    
T  12327365 tagcaacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtg 12327299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 12690276 - 12690386
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt-agacccacaattatt 184  Q
    |||||||| | |||||||| ||||||||||||||||||| |||| |||||  || | |||  | ||| || |||| |||||||| ||||||||  | |||    
T  12690276 aacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccactttaagtggaatctatttccaaagtgtgagacccaccttgatt 12690375  T
Q  185 taaaccaataa 195  Q
    |||||||||||    
T  12690376 taaaccaataa 12690386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 16436108 - 16436197
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||| |||  |||||||||||||||| || || |||||||| || ||| ||||  |||||||||||||| ||  ||||||||||||||    
T  16436108 actctttcattatatgaaatcaatgtatgccc-accattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataa 16436197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 35128860 - 35128794
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    ||||||||||||| | |||||||||||||||| || | ||| || || ||| |||||||||||||||    
T  35128860 actcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 6531440 - 6531399
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctacta 141  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  6531440 cactcactcttttattgggtgaaatcaatgtatgtcccacta 6531399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 12488201 - 12488156
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgt 130  Q
    ||||||| ||| ||| ||| ||||||||||||||||||||||||||    
T  12488201 caacactttttctaatactcactcttttattggatgaaatcaatgt 12488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 8108979 - 8109129
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||||||||||||| |||||||||||||||||| |||| ||||||    |||||||||||||||||||||||||||| |||    
T  8108979 caacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgtagacccacaatgatt 8109078  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  8109079 taaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttg 8109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 50164419 - 50164560
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | || |||| |||| |||||||||| |||||||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  50164419 aacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtagactcacaatgattt 50164518  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  50164519 aaaccaataagaaagtgagcattagagagagtgttcaaaaga 50164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 43771169 - 43771292
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||||||||||||||||||| || | | |||| || |||||||||||||||||||||||||||| |||||||||||||| | |||| |    
T  43771169 actcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgag 43771268  T
Q  205 tattagagagagtgttcaaaagag 228  Q
    ||||| |||| |||||||||||||    
T  43771269 tattaaagagggtgttcaaaagag 43771292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 24834625 - 24834751
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||| ||||||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||||||| | ||||  ||||    
T  24834625 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgactatt 24834724  T
Q  209 agagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| ||| ||||||| ||||||    
T  24834725 agagagagagtttaaaagagagtgttg 24834751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 39471184 - 39471330
Alignment:
Q  89 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 188  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||||| || | ||||||  | |||||| ||||||||||||||||||||| |||||||    
T  39471184 actctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaa 39471283  T
Q  189 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||| | |||| |||||||||||| |||| ||||||| ||||||    
T  39471284 ccaataagagagtgagtattagagagaatgtttaaaagagagtgttg 39471330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 722180 - 722322
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||| ||||||||||||||||||| |||||||| || | ||||||    ||||||||| |||||||||||||||||| |||    
T  722180 caacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatt 722279  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    ||||||||||| | |||| ||||||||||||||||||||||||    
T  722280 taaaccaataagagagtgagtattagagagagtgttcaaaaga 722322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 26361445 - 26361315
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||||| |||||||||| || || |||||||| || |||||| ||||||||||||||||| ||| ||||||||||||||   |||| |    
T  26361445 actcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtgag 26361346  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||| ||||||||||||| ||||||    
T  26361345 tattagagagggtgttcaaaagagagtgttg 26361315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 24938558 - 24938430
Alignment:
Q  99 acacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaa 198  Q
    ||||| |||||||||||||||| ||||||||||||||| || |||||||  |||||||||||| |||||||||||| ||||| |||||||||||||| |     
T  24938558 acactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagag 24938459  T
Q  199 agtgtgtattagagagagtgttcaaaaga 227  Q
    |||  |||||||||| |||||| ||||||    
T  24938458 agtaagtattagagaaagtgttgaaaaga 24938430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 33653626 - 33653511
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||| |||||| |||||||||||||||||||| || ||||||||||| ||||||||||||| | | || ||||||| |||||||||||||| |||||| |    
T  33653626 actcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgatttaaaccaataagaaagtgag 33653527  T
Q  205 tattagagagagtgtt 220  Q
    ||||||||||||||||    
T  33653526 tattagagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 754725 - 754595
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||| ||| |||||||||||||| |||| |||||||| || | ||||||    ||||||||| |||||||||||||||||| ||||||||||||||     
T  754725 taacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataag 754626  T
Q  197 aaagtgtgtattagagagagtgttcaaaaga 227  Q
    | |||| ||||||||||||||||||||||||    
T  754625 agagtgagtattagagagagtgttcaaaaga 754595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 47009212 - 47009355
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||||| || |||| ||||||||||||||| |||| ||||| ||||  ||   |||||| |  ||||||||||||||||||||  |||||| |||    
T  47009212 caacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgatt 47009311  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||    
T  47009312 taaaccaataagaaagtgagtattagagagggtgttcaaaagag 47009355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 20454563 - 20454704
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||||||||||| ||| |||||||||||||||| || | ||||||  | |||||||||||||||||||| ||||||| |||    
T  20454563 caacactctctctagcactcactcttttattagataaaatcaatgtatgtcc-ac-actttgtgttggttcaattttcaaagtgtagatccacaatgatt 20454660  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||| |||||| | |||| || ||||||||||||||||||||||    
T  20454661 taaatcaataacagagtgagtgttagagagagtgttcaaaagag 20454704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 208
Target Start/End: Original strand, 46287479 - 46287587
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||||| |||||||||||||||| ||| |||||| ||||| |||||| | |||||||||||||||||| ||| |||||| |||||||||||||  |||    
T  46287479 cacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaattttcaaagtgttgactcacaatgatttaaaccaatacgaaa 46287578  T
Q  200 gtgtgtatt 208  Q
    ||| |||||    
T  46287579 gtgggtatt 46287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 34129542 - 34129407
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||| |||||||||| |||||||||| ||| || | |||||| |  ||||||||||||||||| ||| ||||||  ||||||||||||||| |    
T  34129542 cactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaaga 34129443  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||| ||||||||||  ||||||| ||||| ||||||    
T  34129442 gtgagtattagagattgtgttcagaagagagtgttg 34129407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 5044690 - 5044568
Alignment:
Q  92 ctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaacca 191  Q
    |||||||||| | ||| |||||||||||||||||||| ||||||  ||||||||||| |  ||||||||| ||| |||||||||||||  ||||||||||    
T  5044690 ctttttaacattcacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaacca 5044591  T
Q  192 ataaaaaagtgtgtattagagag 214  Q
    |||||| | ||  ||||||||||    
T  5044590 ataaaagaatgaatattagagag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 50481702 - 50481592
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    |||||||||||||  |||| ||||||||||||||||||||||| |||||||  || | |||||  || ||| ||||||||||||||||| |||||| |||    
T  50481702 caacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatt 50481603  T
Q  185 taaaccaataa 195  Q
    |||||||||||    
T  50481602 taaaccaataa 50481592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 48339494 - 48339357
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 187  Q
    |||||| ||||||||| ||||| ||||||||  |||||||||||||| | || | |||||| || |||||||||||||| ||||||||| |||  |||||    
T  48339494 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 48339395  T
Q  188 accaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    |||||||||| ||||  | ||||||| |||| ||||||    
T  48339394 accaataaaagagtggatgttagagaaagtgctcaaaa 48339357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 45311078 - 45310962
Alignment:
Q  112 tattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattaga 211  Q
    ||||||||||||||||| ||||||| || | |||||||||||||||||||||||||| ||||  ||||| ||||||| |||||| | |||  ||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattaga 45310979  T
Q  212 gagagtgttcaaaagag 228  Q
    |||   |||||||||||    
T  45310978 gagtcagttcaaaagag 45310962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 22542423 - 22542546
Alignment:
Q  104 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt 203  Q
    ||||||||||||| |||||||||| |||||| | || | |||||| || ||||||||||||||  ||| |||||||| |||||||| ||||| | ||||     
T  22542423 tactcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtga 22542522  T
Q  204 gtattagagagagtgttcaaaaga 227  Q
    |||||| | |||||||||||||||    
T  22542523 gtattaaaaagagtgttcaaaaga 22542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 31251015 - 31250928
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    ||||||||||||||||||||||||||| || ||||| |||   ||||||||||||| |||||||||||||| ||||||| ||||||||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaa 31250928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 49242194 - 49242343
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | ||||| | ||| ||| |||||||||||||||| ||||||| |  | |||||| || |||||||||||| |||||||  |||||| ||||    
T  49242194 aacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgattt 49242293  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||| | | || |||| | |||||||||| ||||||| ||||||    
T  49242294 aaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttg 49242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 45081898 - 45081759
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||| |||||||| |||||| ||||||||| |||| |||  ||| |||| |||| |||||||| || | | |||| ||||||||| || |||||| ||||    
T  45081898 aacattctttttagcacttattcttttatttgatggaatacatgcatgttctaccattttgtgtgggtcctatttccaaagtgtacactcacaataattt 45081799  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    |||||||||||| |||| |||||||| ||| | |||||||    
T  45081798 aaaccaataaaagagtgagtattagaaagaattttcaaaa 45081759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 10169782 - 10169692
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||| |||||||||||||||||| |||||||||| | |||||| |  |||||||||||||   |||| ||||||||||||||||||||||    
T  10169782 actctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatccacaattatttaaaccaataa 10169692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 39016687 - 39016837
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag-acccacaattatt 184  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||||||| || |||||  | || ||| |||| |||||||||| | | ||| | |||    
T  39016687 aacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttccaaagtgtagtatctacattgatt 39016786  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | | | ||||||| |||  ||  ||||||||||||||||||||| ||||||    
T  39016787 ttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttg 39016837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 49077272 - 49077382
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||| ||| |||| |||| | ||||||||| ||| |||| ||| ||||||| || | |||||| || ||||||||| |||||||||||||||||| |||    
T  49077272 caacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatt 49077371  T
Q  185 taaaccaataa 195  Q
    |||||||||||    
T  49077372 taaaccaataa 49077382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 40991667 - 40991606
Alignment:
Q  164 aagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    ||||||||||||||||| |||||||||||||||| |||| |||| |||||||||||||||||    
T  40991667 aagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaa 40991606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 37451156 - 37451027
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||| |||||||||||||||  |||| |||||  || ||| | |||||| |  ||| ||||||||||||||||| | |||| |||||||||||||||    
T  37451156 taacactcactcttttattggatagaatccatgtacatcttaccaatttgtgag--ttctattttcaaagtgtagactcgcaatgatttaaaccaataaa 37451059  T
Q  197 aaagtgtgtattagagagagtgttcaaaagag 228  Q
    | |||| ||||||||||  ||||| |||||||    
T  37451058 agagtgagtattagagaaggtgtttaaaagag 37451027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 38537654 - 38537528
Alignment:
Q  104 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaa---agtgtagacccacaattatttaaaccaataaaaaag 200  Q
    |||| ||||||| ||||||||||||||||||| ||||| |||||  |  ||||||||||||   ||||||||  || ||| ||||||| |||||||| |     
T  38537654 tactattttatttgatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataaaagaa 38537555  T
Q  201 tgtgtattagagagagtgttcaaaaga 227  Q
    ||  |||||||||||||||||||||||    
T  38537554 tgattattagagagagtgttcaaaaga 38537528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 50571887 - 50571982
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaat 180  Q
    ||||||||| | || |||||||||||||||| ||||||||||||||||| || |  | ||| || || ||||||||||||||||||||||| ||||    
T  50571887 caacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaagtgtagacccgcaat 50571982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 49769960 - 49769850
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||| |||||||||||| ||||||||||||||||||||||||  ||| ||| |||||||| || |  ||  ||||||||||| || ||| ||||| ||||    
T  49769960 aacattctttttaacacatactcttttattggatgaaatcaaaatatatcccactattttatgtgagttttattttcaaagtataaacctacaatgattt 49769861  T
Q  186 aaaccaataaa 196  Q
    |||| ||||||    
T  49769860 aaactaataaa 49769850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 20225483 - 20225388
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||| |||||||||||||||| |||| ||| |||||| || | ||| || || ||| |||| |||||||||||| |||||| ||||||||||||||    
T  20225483 cactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtagactcacaatgatttaaaccaataa 20225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 228
Target Start/End: Complemental strand, 25719257 - 25719126
Alignment:
Q  98 aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaa 196  Q
    |||||| ||||| ||||||| |||||||||||||||||| || | ||| || || ||  |||| |||| |||| |||||||||| |||||| ||||| |     
T  25719257 aacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcag 25719158  T
Q  197 aaagtgtgtattagagagagtgttcaaaagag 228  Q
    | |||| |||||||||| | ||||||||||||    
T  25719157 agagtgagtattagagaaattgttcaaaagag 25719126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 46242078 - 46242000
Alignment:
Q  108 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| ||||||||||| ||||||||| || ||||||||  | ||||||||||||| | |||||||||||| |||||    
T  46242078 cttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatatagacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 52671877 - 52671995
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||||||| ||||||||||| || ||||| ||    ||||||||| |||||||| |  | |||| |||||||| ||||| | |||| |||||    
T  52671877 ttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtgagtatt 52671976  T
Q  209 agagagagtgttcaaaaga 227  Q
    | |||||||||| ||||||    
T  52671977 aaagagagtgtttaaaaga 52671995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 4138913 - 4138998
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||||||||||||||||||||||| || || || |  |||||| |||| |||||||||||| | |||| ||||||| ||||||    
T  4138913 tttattggatgaaatcaatgtatgtcccaccatattttatggattctatttccaaagtgtagactcgcaataatttaaatcaataa 4138998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 41153351 - 41153239
Alignment:
Q  89 actctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 188  Q
    ||||| |||| |||||||||||||||||||||||||  ||| |||||| || | ||||||  | ||| ||||  |||||||| |  |||||| ||||| |    
T  41153351 actctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttaga 41153252  T
Q  189 ccaataaaaaagt 201  Q
    |||||||||||||    
T  41153251 ccaataaaaaagt 41153239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 5545673 - 5545752
Alignment:
Q  157 attttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||| |||| |||||||| | |||||| | ||| |||||||  ||||||||||||||||||||||||| ||||||    
T  5545673 attttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaaagagagtgttg 5545752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 19447174 - 19447305
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag-acccacaattatttaaaccaataaaaaagtgt 203  Q
    ||||| ||||||| ||||| |||||||||||| || | ||| || || ||| ||||||||| || || ||| ||||| ||||||  |||| | | ||||     
T  19447174 actctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtga 19447273  T
Q  204 gtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||| |||||||||||||||||| ||||||    
T  19447274 gtattaaagagagtgttcaaaagagagtgttg 19447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 49682924 - 49682834
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||| ||||||||||||||||| ||  || | ||| |  | ||||||||||||||||||||| |||||   ||||||||||||||||||    
T  49682924 ttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcgatttaaaccaataaaaaa 49682834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 16178746 - 16178697
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaatgta 131  Q
    |||||||||||| | |||| || |||||||||||||||||||||||||||    
T  16178746 tagcaacactctctctaactctcactcttttattggatgaaatcaatgta 16178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 19937301 - 19937180
Alignment:
Q  113 attggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagag 212  Q
    |||||||  ||||||||||||||| || ||| | || |  ||| ||||||||||| |||| | ||||| ||| ||||||| |||| |||| | |||| ||    
T  19937301 attggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaattaaag 19937202  T
Q  213 agagtgttcaaaagagtgtgtt 234  Q
    |||||||| ||||||| |||||    
T  19937201 agagtgtttaaaagagagtgtt 19937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 30867074 - 30866945
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga-cccacaattatttaaaccaataaaaa 198  Q
    |||| ||| ||||||||||| |||| ||||||||||| || | ||| || || ||| |||||||||||||||| |||||| |  ||| | | ||||||||    
T  30867074 cactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttcacctaataaaaa 30866975  T
Q  199 agtgtgtattagagagagtgttcaaaagag 228  Q
    | || ||  ||||||||||||| |||||||    
T  30866974 aatgagtgctagagagagtgtttaaaagag 30866945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 37050695 - 37050642
Alignment:
Q  175 cacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||| |||||||||||||||||| || |||||| ||||||| ||||||||||    
T  37050695 cacaatgatttaaaccaataaaaaaatgagtattaaagagagtattcaaaagag 37050642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 44832492 - 44832637
Alignment:
Q  91 tctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaac 189  Q
    ||||| || |||| ||| ||||||||| |||||| ||||||||||| || ||||| || |||||| |||| ||||||| | | || ||| | |||| | |    
T  44832492 tctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattccatttccaaagtgcaggtcctacattgatttcacc 44832591  T
Q  190 caataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||| || ||  | ||||||||| ||||||||| ||||||    
T  44832592 caataaaaaaatgagtgctggagagagtgctcaaaagagagtgttg 44832637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 21777000 - 21776948
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctac 139  Q
    ||||||| | ||||| | ||||||||||||||| |||||||||||||||||||    
T  21777000 acactctctctaacattcactcttttattggataaaatcaatgtatgtcctac 21776948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 29699527 - 29699650
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| ||||||||||||||||||||||||  |||||| || | ||||||  | ||| | ||||||||| ||| || ||||| ||||||| |||||| | |    
T  29699527 cactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttcta-tttcaaagtatagcccgacaatgatttaaaacaataagaga 29699625  T
Q  200 gtgtgtattagagagagtgttcaaa 224  Q
    |||  ||||||| ||||||| ||||    
T  29699626 gtgaatattagatagagtgtacaaa 29699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 2088810 - 2088735
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    ||||||| ||||||| ||||  |||||||||||||||||| || | ||| || |||||| |||| |||||||||||    
T  2088810 taacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgtaga 2088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 6212734 - 6212785
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcc 136  Q
    ||||||| |||||| |||||||| ||||||| |||||||| |||||||||||    
T  6212734 caacactgtttttatcacttactattttattcgatgaaattaatgtatgtcc 6212785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 38636375 - 38636470
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||| ||||||||||| ||| |||||||||||||||  |||| ||| || || |  |||||| |||||||||| ||||||| ||||| | ||||||    
T  38636375 cactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataa 38636470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 52279351 - 52279276
Alignment:
Q  150 ggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    |||||||||||||||||| |||||||||||| ||||| | |||||  | ||||  ||||||| |||||||| ||||    
T  52279351 ggattcaattttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtttaaaa 52279276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 50652470 - 50652376
Alignment:
Q  108 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtg 202  Q
    ||||||||| || |||||||||||| ||  || | ||||||  | ||||||||||||| |||||||  ||||| ||||||| |||||| ||||||    
T  50652470 cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtg 50652376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 11895134 - 11895211
Alignment:
Q  159 tttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattag-agagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||||| |||| ||| ||||| | |||| ||| ||| | | |||||||||||||| ||||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttg 11895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 42862563 - 42862494
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt 169  Q
    |||| ||| ||||||||| |||||||||||||||||| || | ||| || || ||| |||||||||||||    
T  42862563 cactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgt 42862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 19933555 - 19933483
Alignment:
Q  163 aaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||  ||||| |||||||| ||||||  |||  |||||| ||||||||||||||| || ||||||    
T  19933555 aaagtgtagactaacaatgatttaaactaataaatgagttggtattaaagagagtgttcaaaatagagtgttg 19933483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 6442188 - 6442330
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| | || ||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| |||    
T  6442188 caacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatt 6442287  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    ||||||||||||| |||| |||||| ||| |||||||||||||    
T  6442288 taaaccaataaaagagtgagtattaaagatagtgttcaaaaga 6442330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 22189962 - 22190112
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||||||||||||||||||||||||||||| || || | |||||| || ||||||||||||||||||||||| |||| |||    
T  22189962 caacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtagacccgcaatgatt 22190061  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||| ||||||    
T  22190062 taaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttg 22190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 27949297 - 27949446
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | ||||||| |||||| ||||||||||||||||  |||||||||| |||||||| |  ||||| |||||||||||||||||||||| ||||    
T  27949297 aacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgtagacccacaatgattt 27949396  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||||| | |||| ||||||||||||||||||||||||| ||||||    
T  27949397 aaactaataagagagtgagtattagagagagtgttcaaaagagagtgttg 27949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 11824109 - 11824242
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||  | |||||||||||||||||| ||||||||| ||||||| |||||| |||    
T  11824109 cactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaa 11824208  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||| |||||  |||||||||||||||||| ||||||    
T  11824209 gtgagtatt--agagagtgttcaaaagagagtgttg 11824242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 27888308 - 27888455
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 187  Q
    |||||| | ||||||| || || | ||||||| |||||||||||||||| || | |||||| || ||||||||| |||||||||||||||||| ||||||    
T  27888308 cactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaa 27888407  T
Q  188 accaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| | |||| || |||||||||||| ||||||||| ||||||    
T  27888408 accaataagagagtgagtgttagagagagtgctcaaaagagagtgttg 27888455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 46517329 - 46517464
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||| |||||||||| |||||||||||| ||| || ||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||| | |    
T  46517329 cactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaga 46517428  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     || |||||||||||  |||||||||||| ||||||    
T  46517429 atgagtattagagaggctgttcaaaagagagtgttg 46517464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 11692222 - 11692352
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||||||||||||||||||||||||||| | ||||||  | |||||||||||||||||| || |||| | |||||||| ||||  | |||| |    
T  11692222 actcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtgag 11692321  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||| ||||||||||||| ||||||    
T  11692322 tattagagagtgtgttcaaaagagagtgttg 11692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 25686968 - 25686842
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||| ||||||||||||||||||| ||| | ||| |  || |||||||||||||||||||||||||||| |||||||||||||| | | || |||||    
T  25686968 ttttatttgatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtatt 25686869  T
Q  209 agagagagtgttcaaaagagtgtgttg 235  Q
    ||| ||| |||||||||||| ||||||    
T  25686868 agaaagaatgttcaaaagagagtgttg 25686842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 31502609 - 31502511
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||| ||||||||||||||||||||||| |||||||| || |||||||| |  ||||||||||||||||||||| |||||| ||||||||||||||    
T  31502609 taacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgtagactcacaatgatttaaaccaataa 31502511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 32205119 - 32205241
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||| |||  | ||||| |||||||| ||||| | |||| |    
T  32205119 actcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtataggtctacaatgatttaaactaataagagagtgag 32205218  T
Q  205 tattagagagagtgttcaaaaga 227  Q
    ||||||||||  |||||||||||    
T  32205219 tattagagaggatgttcaaaaga 32205241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 33008142 - 33008274
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||||||||||||||||||| ||||||||| || | |||||| || ||| |||| ||| ||||||||||||||| |||||||||||||||| |    
T  33008142 cactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataaaaga 33008241  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | | ||||||   |||||||||||||||| ||||||    
T  33008242 gagagtatta---agagtgttcaaaagagagtgttg 33008274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 7775023 - 7775165
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| |||||||||||||||||||||||||||||||| || | |||||| |  ||||||||||||||||| || ||| ||| |||    
T  7775023 caacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaatgatt 7775121  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||| |||||   ||||  ||||||||||||||||||||||||    
T  7775122 taaacaaataagtgagtgaatattagagagagtgttcaaaagag 7775165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 12263573 - 12263458
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||| ||||| ||||||||||||||| |  | ||||||  |  ||||||||||||||||||||||||||| |||||||||||||| | |||| |    
T  12263573 actcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtagacccacaatgatttaaaccaataagatagtgag 12263474  T
Q  205 tattagagagagtgtt 220  Q
    ||||||||||||||||    
T  12263473 tattagagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 6580120 - 6580009
Alignment:
Q  124 tcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaa 223  Q
    ||||||||||||  |||| ||||||  | ||||||||||||| | | |||||||||| |||||||||||||| | |||| ||||||||||||||||||||    
T  6580120 tcaatgtatgtctcactactttgtgtaggttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaa 6580021  T
Q  224 aagagtgtgttg 235  Q
    ||||| ||||||    
T  6580020 aagagagtgttg 6580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 14795178 - 14795300
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||||||||||||||||||| || | ||| ||  | ||||||||| |||||||| | ||| ||| |||||||| ||||| | |||| ||||     
T  14795178 ttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtata 14795277  T
Q  209 agagagagtgttcaaaagagtgt 231  Q
    |||||||||||||||||||||||    
T  14795278 agagagagtgttcaaaagagtgt 14795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 15242170 - 15242292
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||||||||||||||||||| || | ||| ||  | ||||||||| |||||||| | ||| ||| |||||||| ||||| | |||| ||||     
T  15242170 ttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtata 15242269  T
Q  209 agagagagtgttcaaaagagtgt 231  Q
    |||||||||||||||||||||||    
T  15242270 agagagagtgttcaaaagagtgt 15242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 32213004 - 32212877
Alignment:
Q  107 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 206  Q
    |||||||||||||||||||||||||||||  |||| |||||  |  ||||||||| ||| ||||| |||||||| |||||||||||||| | |||| |||    
T  32213004 tcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagta 32212906  T
Q  207 ttagagagagtgttcaaaagagtgtgttg 235  Q
    ||| | || ||||||||||||| ||||||    
T  32212905 ttatatagggtgttcaaaagagagtgttg 32212877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 25092798 - 25092704
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    ||||||| ||| |||| |||||||||||||||||||| |||||| |  |||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  25092798 actctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtatagacacacaataatttaaaccaataaaaaa 25092704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 44350891 - 44350809
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||| |||| ||||||||||  ||||||||||||| ||||||    
T  44350891 ttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttg 44350809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 27320465 - 27320540
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||| ||||||||||||||||||||||||||  ||||| |||||| ||| |||||||||| ||||||||||    
T  27320465 ttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaagag 27320540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 32605355 - 32605457
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||||||||  | || |||||| |||||||||||| ||||||||| | |||||| |||    
T  32605355 caacactctttttagcactcattcttttat-ggatgaaatcaatgtatgtctcattactttgtgtggattcaatttttaaagtgtaggctcacaatgatt 32605453  T
Q  185 taaa 188  Q
    ||||    
T  32605454 taaa 32605457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 226
Target Start/End: Complemental strand, 19422991 - 19422850
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||||||| |||||||||||||||||||||||| ||    ||||   |   | |||||| ||||||||| ||||||| |||    
T  19422991 caacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaagtgtagatccacaatgatt 19422892  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaag 226  Q
    ||||||||||||| |||| |||| ||||| ||||||||||||    
T  19422891 taaaccaataaaagagtgagtatcagagatagtgttcaaaag 19422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 24539278 - 24539129
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 185  Q
    ||||||| | ||||||| ||||||||||||||| |||||||| ||||||| || | ||| |  |||||| |||| |||| |||| |||||||| | ||||    
T  24539278 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgattt 24539179  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    || ||||| | | |||| || ||||||||||||| |||||||| ||||||    
T  24539178 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttg 24539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 39254121 - 39254249
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||||||||| || |||| |||||||||   || | ||||||  | ||||||||| ||| |||||||||||||| ||||||| |||||| | |    
T  39254121 cactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaatgtagacccacaataatttaaatcaataagaga 39254220  T
Q  200 gtgtgtattagagagagtgttcaaaagag 228  Q
    ||| || ||| ||||||||||||||||||    
T  39254221 gtgagtgttaaagagagtgttcaaaagag 39254249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 36845658 - 36845569
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||||||||| ||||||||||| ||| ||  || | |||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  36845658 actcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaattttcaaagtatagacccacaatgatttaaaccaataa 36845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 48374524 - 48374446
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||||||||| || |||||| ||||||||||| || | |||| ||||||||||||||||||||||||| ||||||    
T  48374524 atttccaaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttg 48374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 17749719 - 17749868
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 185  Q
    ||||||| | ||||||| ||||||||||||||| |||||||| ||||||| || | ||| |  |||||  |||| |||| |||| |||||||| | ||||    
T  17749719 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgattt 17749818  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    || ||||| | | |||| || ||||||||||||| |||||||| ||||||    
T  17749819 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttg 17749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 7459435 - 7459505
Alignment:
Q  154 tcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaa 224  Q
    |||||||||||| | |||| ||||||| |||||||||||||||| |||| |||||| ||||||| ||||||    
T  7459435 tcaattttcaaaatatagatccacaataatttaaaccaataaaagagtgagtattaaagagagtattcaaa 7459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 25428633 - 25428485
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga-cccacaattattta 186  Q
    |||||||||||  ||| ||||||||||||  |||||||||||||||||| || | ||| || || ||  |||| ||||||||||| || ||| | ||||     
T  25428633 cactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtagatcctacattgatttt 25428534  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | ||||||||| |||| ||  || |||||||| ||||||||| ||||||    
T  25428533 atccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttg 25428485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 17354681 - 17354598
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||||| || | ||| || || ||| |||| ||||||||||    
T  17354681 cactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 19494476 - 19494409
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    ||||||||||||| |||||||||||||||||| || | ||| || || ||| ||||||||||||||||    
T  19494476 actcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaga 19494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 19841057 - 19840891
Alignment:
Q  72 tgaggaatattagcaacactct--ttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgt 169  Q
    ||||||||  ||||||||||||  ||||| || | ||||||||||||| ||||||||||||||||| ||| | ||| || || ||| |||| ||||||||    
T  19841057 tgaggaatgctagcaacactctctttttagcattcactcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgt 19840958  T
Q  170 a-gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | | || | | | |||| | ||||||||| |||| ||  ||||||||||| |||||| || ||||||    
T  19840957 aggtcctatattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttg 19840891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 32178945 - 32178823
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||||| |||||||||||||||| ||||||||| | || | | |||    ||||||||||||||||||| || |||||| ||||||| |||||| | |    
T  32178945 cacttactattttattggatgaaattaatgtatgttccaccactctgtttt-attcaattttcaaagtgtatacacacaatgatttaaatcaataagaga 32178847  T
Q  200 gtgtgtattagagagagtgttcaa 223  Q
    |||  ||| ||||||| |||||||    
T  32178846 gtgattatcagagagattgttcaa 32178823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 45909503 - 45909630
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataaaaaagtgtgtat 207  Q
    ||||||||| |||||||||||||||||| || | ||| || || ||| |||| |||| |||||  || ||| | |||| | ||||||||| |||| || |    
T  45909503 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgt 45909602  T
Q  208 tagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||| |||||||||| ||||||    
T  45909603 tagagagagtattcaaaagagagtgttg 45909630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 46994448 - 46994369
Alignment:
Q  157 attttcaaagtgt-agacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| |||||||| |||||||| || |||||| |||||||||||||| || |||||||||| ||| ||||||| ||||||    
T  46994448 atttccaaagtgtgagacccaccatgatttaagccaataaaaaagtgagtgttagagagagcgttaaaaagagagtgttg 46994369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  170 agacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||||||| |||||||||||||| |||||| |||||| ||||||||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 235
Target Start/End: Original strand, 13919828 - 13919954
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||| |||||||||||||||||| || | ||| || || ||| |||||||||||||| | || ||| | |||| | ||||||||  |||| ||  |    
T  13919828 tttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagtgct 13919927  T
Q  209 agagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||| ||||||||| ||||||    
T  13919928 agagagagtgctcaaaagagagtgttg 13919954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 45206084 - 45206042
Alignment:
Q  93 tttttaacacttactcttttattggatgaaatcaatgtatgtc 135  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  45206084 tttttaacacttactctttcatcggatgaaatcaatgtatgtc 45206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 42274705 - 42274656
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtc 135  Q
    |||||||| ||| ||| ||||||||||||| |||||||||||||||||||    
T  42274705 aacactctatttgacagttactcttttatttgatgaaatcaatgtatgtc 42274656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 26703582 - 26703446
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 198  Q
    |||| ||||||||||||| |||||||||||||||||  || | ||| || || ||| ||||  |||||||| | || ||| |||||| | |||||||||     
T  26703582 cactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccatttctaaagtgtaggtcctacatttatttcacccaataaaag 26703483  T
Q  199 agtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||  ||||||||||| ||| ||||| ||||||    
T  26703482 agtgagtgctagagagagtgctcagaagagagtgttg 26703446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 28713049 - 28713089
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtc 135  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  28713049 tttaacacttactcttttattgaatgaaatcaatatatgtc 28713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 12271029 - 12271095
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    ||||||||||  |||||||||||||||||||| || | |||||| || ||| ||||||||||||||||    
T  12271029 actcttttatcagatgaaatcaatgtatgtcccaccactttgtgtgg-ttctattttcaaagtgtaga 12271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 7774944 - 7775009
Alignment:
Q  161 tcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    ||||||||| |||| ||||| |||||||||||||| | |||   |||||||||||||||||||||||    
T  7774944 tcaaagtgtggacc-acaatgatttaaaccaataagagagtaaatattagagagagtgttcaaaaga 7775009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 44511093 - 44511043
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtc 135  Q
    ||||||||| | || |||| ||| |||||||||||||||||||||||||||    
T  44511093 caacactctctctagcactcacttttttattggatgaaatcaatgtatgtc 44511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 2911882 - 2911927
Alignment:
Q  182 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  2911882 atttaagccaataaaaaagtgagtattggagagagtgttgaaaaga 2911927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 10934100 - 10933979
Alignment:
Q  107 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 206  Q
    ||||||||||||| |||| ||| ||||||  || | |||||  || ||| |||| |||||| || ||||||||| |||||||| ||||| | | || |||    
T  10934100 tcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagta 10934001  T
Q  207 ttagagagagtgttcaaaagag 228  Q
    ||| | |||| |||||||||||    
T  10934000 ttaaaaagagcgttcaaaagag 10933979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 20954800 - 20954853
Alignment:
Q  182 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||| |||||||||||||| || || ||||||||||| ||||||| ||||||    
T  20954800 atttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttg 20954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 31874069 - 31874110
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctacta 141  Q
    |||| ||| |||||||||||||||||||||||||||| ||||    
T  31874069 cactcacttttttattggatgaaatcaatgtatgtccaacta 31874110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 31874117 - 31874174
Alignment:
Q  163 aaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||||||| |||||| ||||||||| |||| | |||| ||||| |||||||||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 38065386 - 38065333
Alignment:
Q  182 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||| |||||| ||||| ||||||||||| || |||| ||||||    
T  38065386 atttaaaccaataagaaagtgagtatttgagagagtgttgaagagagagtgttg 38065333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 3855899 - 3855855
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    |||||||||||||||  ||||| ||||| ||||||||||||||||    
T  3855899 ttcaattttcaaagttcagacctacaatgatttaaaccaataaaa 3855855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 4090134 - 4090086
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatg 133  Q
    ||||| ||| ||||||||||| | |||||||||||||||||||| ||||    
T  4090134 caacattctctttaacacttatttttttattggatgaaatcaatctatg 4090086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 8073430 - 8073394
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcc 136  Q
    |||| |||||||||| |||||||||||||||||||||    
T  8073430 cactcactcttttatcggatgaaatcaatgtatgtcc 8073394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 9111490 - 9111406
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 170  Q
    |||||||| |||| || | ||||||||||| |||||||||||| ||| |||||| | ||| |  |||||||||||| ||| ||||    
T  9111490 aacactctatttagcattcactcttttattagatgaaatcaatctatatcctaccactttatttggattcaatttttaaaatgta 9111406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 30742615 - 30742547
Alignment:
Q  167 tgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| ||||| ||||||| |||||| ||| ||  |||||||| |||||||||||| || ||||||    
T  30742615 tgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgttcaaaatagagtgttg 30742547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 36845566 - 36845498
Alignment:
Q  167 tgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||| |||||||||||||| | ||||  ||||  ||||||| ||||||| || ||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttg 36845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 41508425 - 41508385
Alignment:
Q  92 ctttttaacacttactcttttattggatgaaatcaatgtat 132  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  41508425 ctttttagcactcacttttttattggatgaaatcaatgtat 41508385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 41105741 - 41105577
Alignment:
Q  71 atgaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 170  Q
    |||||||||  |||||||||||| | ||| ||||||||||||||||||||||||||| | |||||| |||| |||||| || |||||||||||||||| |    
T  41105741 atgaggaatgctagcaacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgca 41105642  T
Q  171 gacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     ||||||| | |||||||||||||| | || | ||||||||||||||| ||||||||| ||||||    
T  41105641 tacccacagtgatttaaaccaataagagagcgagtattagagagagtgctcaaaagagagtgttg 41105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 5413874 - 5413741
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||||||||||||||||||| || | |||||| || |||||||| ||||||||||||||| ||| ||||||||||||||||||||| |    
T  5413874 actcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtgag 5413775  T
Q  205 tatta---gagagagtgttcaaaagagtgtgttg 235  Q
    |||||    |||||||||||||||||| ||||||    
T  5413774 tattatagtagagagtgttcaaaagagagtgttg 5413741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 28490855 - 28490729
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||||||||||||||| |||||||| || | ||||||    ||||||||| |||||||||||||||||| |||||||||||||| | |||| |||||    
T  28490855 ttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 28490756  T
Q  209 agagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||||||| ||||||    
T  28490755 agagagagtgttcaaaagagagtgttg 28490729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 228
Target Start/End: Complemental strand, 34384838 - 34384705
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 194  Q
    ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||| |  ||||||||||||| | ||||| |||||| ||||| ||| |||    
T  34384838 tttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgata 34384739  T
Q  195 aaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||| |||| |||||| ||||||||||||||||||    
T  34384738 aaagagtgagtattaaagagagtgttcaaaagag 34384705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 28223923 - 28223783
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 194  Q
    ||||||||||| |||||||||| ||||||| | ||||||| |  | |||||||| ||  |||||||||||||| |||||||| ||| |||||||||||||    
T  28223923 tttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttcaaagtatagacccataatgatttaaaccaata 28223824  T
Q  195 aaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||| |||| |||||||||||  |||||||||||| ||||||    
T  28223823 aaagagtgagtattagagaggatgttcaaaagagggtgttg 28223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 30326029 - 30325883
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||  || | ||| || |  ||| || | ||||||||||| || |||| |||||    
T  30326029 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgattta 30325930  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgt 233  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  30325929 aaccaataagaaagtgagtattagagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 36338047 - 36337892
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    |||||||| ||||| |||| | | ||||||| |||||||| ||||||||||| |  ||||||||    |||||||| ||||||||||||||||||| |||    
T  36338047 caacactcattttagcactcattattttatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatt 36337948  T
Q  185 taaaccaataaaaaagt---gtgtattagagagagtgttcaaaagagtgtgttgat 237  Q
    |||||||||||||||     ||||||||||||||||||||||||||  ||||||||    
T  36337947 taaaccaataaaaaaaataagtgtattagagagagtgttcaaaagatagtgttgat 36337892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 10142118 - 10141998
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| ||||||||||||||| |||||||||||||||| || | ||||||  | ||| |||||||||||||||||| ||||||||||||| |||||| | |    
T  10142118 cactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagaccaacaattatttaaatcaataagaga 10142019  T
Q  200 gtgtgtattagagagagtgtt 220  Q
    ||| || ||||||||||||||    
T  10142018 gtgagtgttagagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 25710642 - 25710494
Alignment:
Q  72 tgaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    ||||||||  |||||||||||| |||| |||| ||||||||||||  ||||||||||||||||||||| | || ||  |  ||| |||||||||||||||    
T  25710642 tgaggaatgctagcaacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtag 25710543  T
Q  172 acccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||||| |||||||||||||| | | ||  ||||| ||||||||||    
T  25710542 acccacaataatttaaaccaataagagaatgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 28434985 - 28434846
Alignment:
Q  73 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    |||||||  |||||||||||| | ||||||| | ||||||||||||| |||||||| ||||||| || | | ||| ||  ||||||||||||||| ||||    
T  28434985 gaggaatgctagcaacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccactgtgttgg--ttcaattttcaaagtttaga 28434888  T
Q  173 cccacaattatttaaaccaataaaaaagtgtgtattagagag 214  Q
    |||||||| |||||||||||||| ||| || |||||||||||    
T  28434887 cccacaatgatttaaaccaataagaaaatgagtattagagag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 34368395 - 34368533
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||| ||||||| ||||||| ||| |||||||||| | || | |||||| || |||| ||||||||||||||||||||||| ||||||||||||||     
T  34368395 taacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataag 34368494  T
Q  197 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | |||| ||   |||||||||| ||||||||| ||||||    
T  34368495 agagtgggtgacagagagagtgctcaaaagagagtgttg 34368533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 41330530 - 41330404
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgt- 203  Q
    ||||||||||| |||||||| ||||||||||| |  | ||||||  | ||||||||||||||||||||| |||||| |||||||||||||| ||| |||     
T  41330530 actcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaa-tgta 41330432  T
Q  204 gtattagagagagtgttcaaaagagtgt 231  Q
    |||||| |||| ||||||||||||||||    
T  41330431 gtattaaagagtgtgttcaaaagagtgt 41330404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 37455392 - 37455525
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||| |||||| ||| |||||||||||||| | || ||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||| | |||| |    
T  37455392 actcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaataatt-aaaccaataagagagtgag 37455490  T
Q  205 tattagagagag----tgttcaaaagagtgtgttg 235  Q
    |||||||||| |    |||||||||||| ||||||    
T  37455491 tattagagagggagggtgttcaaaagagagtgttg 37455525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 25919266 - 25919377
Alignment:
Q  117 gatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagag 216  Q
    |||||||||||| ||||||  || |||||||| ||  |||||||||||||||||||| |||||| |||||||||||||||||| ||  ||||| ||| ||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaagaaag 25919365  T
Q  217 tgttcaaaagag 228  Q
    | ||||||||||    
T  25919366 tattcaaaagag 25919377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 10950109 - 10950219
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| |||  |||||||||||| |||| ||||||||||||||||||| || |||||||  |||||| ||||||||||| ||||| || ||| |||    
T  10950109 caacactctctttctcacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatt 10950208  T
Q  185 taaaccaataa 195  Q
    ||||| |||||    
T  10950209 taaactaataa 10950219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 25630830 - 25630947
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| ||||||| ||||| |||||||  || |||| ||||||| ||| ||||||||||   | ||||||||||||||||||||||||| || |||    
T  25630830 caacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttcaaagtgtagacccacgatgatt 25630929  T
Q  185 taaaccaataaaaaagtg 202  Q
    ||||||||| | ||||||    
T  25630930 taaaccaattagaaagtg 25630947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 27592607 - 27592457
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||  || | ||| || |  ||| |||| ||||||||||| |  |||| |||||    
T  27592607 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 27592508  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttgat 237  Q
    ||||||||| | |||| |||   |||||||| |||||||||| ||||||||    
T  27592507 aaccaataagagagtgggtacaggagagagtattcaaaagagagtgttgat 27592457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 31885963 - 31885877
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    |||||||||||||| ||||| |||||| || ||||| ||| | |||||||||||||||||||| | ||||| |||||||||||||||    
T  31885963 tttattggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaaccaataaa 31885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 4714777 - 4714922
Alignment:
Q  90 ctctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaac 189  Q
    |||||||||||| | ||| ||||||||||| |||| | ||| ||||| |  |||||||| || ||| ||||||||| ||||||  |||||| ||||| ||    
T  4714777 ctctttttaacattcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttatac 4714876  T
Q  190 caataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| ||    ||||||||||| |||||||||||| ||||||    
T  4714877 caataaaagagaacatattagagagaatgttcaaaagagagtgttg 4714922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 39246657 - 39246741
Alignment:
Q  111 ttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||||| |||||||||||||||| || | |||||| |  |||| |||||||||||||||||||||||  |||||||||||||    
T  39246657 ttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataa 39246741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 220
Target Start/End: Complemental strand, 17537259 - 17537124
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||||||||||| ||| |||||||||||||||| || | ||| ||  | || ||||||||||||||||| ||| ||| |||    
T  17537259 caacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatt 17537160  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||||||| | ||||  ||| ||||||| ||||    
T  17537159 taaaccaataagagagtgaatataagagagattgtt 17537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 14553573 - 14553665
Alignment:
Q  123 atcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagaga 215  Q
    ||||||||||||||||| |||||  |  | ||||||||| |||||||||||||||||| | ||||||||| || | |||| ||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 17434983 - 17434857
Alignment:
Q  108 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtat 207  Q
    |||||||||||| |||  ||| ||||| ||||||||||||  |  ||| ||||  |||||||||||||||| | |||||||||||||||| ||||   ||    
T  17434983 cttttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgtagacccacattgatttaaaccaataaaagagtgaacat 17434884  T
Q  208 tagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| |||| ||||||| ||||||    
T  17434883 tagagaga-tgtttaaaagagagtgttg 17434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 28611863 - 28611785
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||| ||||||||||| |||||| ||||||| |||||||| |||  || |||||||||||| ||||||||| ||||||    
T  28611863 atttttaaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttg 28611785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 28155842 - 28155769
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagac 173  Q
    ||||||||||||||||| ||||||||||||||||| | || ||||| |  || || ||||||||||||||||||    
T  28155842 cacttactcttttattgaatgaaatcaatgtatgttcaaccattttttatgggtttaattttcaaagtgtagac 28155769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 28090371 - 28090251
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||||| || ||||  |||||||||||  |||||| || | |||||| |  ||||||||||||||| |||| | ||||| |||||||||||||||| |    
T  28090371 cacttactattatattatatgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaaccaataaaaga 28090272  T
Q  200 gtgtgtattagagagagtgtt 220  Q
    |||  ||||| | ||||||||    
T  28090271 gtgaatattacatagagtgtt 28090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 13456302 - 13456236
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    |||||||||| ||||||||||||||||| ||| || ||||| || || ||| |||||||||||||||    
T  13456302 actcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattttcaaagtgtag 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 34480079 - 34480005
Alignment:
Q  114 ttggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 188  Q
    ||||||||||||||| ||| ||  || |||||||| | |||||||||| |||||| ||||||||||| |||||||    
T  34480079 ttggatgaaatcaatatatatctcaccattttgtgtgaattcaatttttaaagtgcagacccacaataatttaaa 34480005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 24990906 - 24990994
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 170  Q
    |||||||| |||||| ||||||  |||||||||||| |||||||||| ||||||| || | ||| ||  | ||| ||||||||||||||    
T  24990906 tagcaacaatcttttgaacactcgctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgta 24990994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 4427336 - 4427379
Alignment:
Q  156 aattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||||||||||||||| |||||| |||||||| |||||||||    
T  4427336 aattttcaaagtgtagactcacaatgatttaaacaaataaaaaa 4427379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 2935449 - 2935495
Alignment:
Q  182 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||||||||||| |||| |||||||||| | ||||||||||||    
T  2935449 atttaaaccaataaaagagtgagtattagagaaattgttcaaaagag 2935495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 4959333 - 4959287
Alignment:
Q  189 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||| |||| ||||||||||||||| ||||||||| ||||||    
T  4959333 ccaataaaagagtgggtattagagagagtgctcaaaagagagtgttg 4959287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 43541874 - 43541924
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtc 135  Q
    ||||||||| ||||| |||| ||||||||||| || |||||||||||||||    
T  43541874 caacactctctttaatacttcctcttttattgaataaaatcaatgtatgtc 43541924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 25002091 - 25002014
Alignment:
Q  157 attttcaaagtgt-agacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgt 233  Q
    |||| |||||||| |||||||| || |||||||||||| | |||||| || || ||||||||||| ||||||| ||||    
T  25002091 atttccaaagtgtgagacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttgaaaagagagtgt 25002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 24915075 - 24915163
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta 170  Q
    |||||||| |||||| | ||||  |||||||||| | |||||||||| ||||||| || | ||| || || ||| ||||||||||||||    
T  24915075 tagcaacaatcttttgagcactcgctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgta 24915163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 42224733 - 42224597
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 198  Q
    |||| ||||||||||| | |||||||||||||||||| || | ||| || || ||| |||| ||||||||| | || ||| | |||| | |||||||||     
T  42224733 cactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaag 42224634  T
Q  199 agtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||  | ||||||||  ||||||||| ||||||    
T  42224633 agtgagtgctggagagagttctcaaaagagagtgttg 42224597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 29673489 - 29673633
Alignment:
Q  76 gaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc 175  Q
    ||||| |||||||||||| | ||||||| | | ||||||||||| |||||||| ||||||| || ||||||||  | |||||||||||||||||||| |     
T  29673489 gaatactagcaacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaact 29673588  T
Q  176 acaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  29673589 acaattatttaaaccaataaaaaagtgagtattagagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 41958121 - 41958241
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| | |||||||||||||| | |    
T  41958121 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataagaga 41958220  T
Q  200 gtgtgtattagagagagtgtt 220  Q
    ||| |||||||| ||||||||    
T  41958221 gtgagtattagaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 33193098 - 33193212
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 209  Q
    ||||||||||||||||||||||||| | || |||||||| || |||||||||||||||||||||||||||| |||||||||||||| | | || ||||||    
T  33193098 tttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtatta 33193197  T
Q  210 gagagagtgttcaaa 224  Q
    |||| ||||||||||    
T  33193198 gagaaagtgttcaaa 33193212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 19101756 - 19101615
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||||||||||||||| |  |||| |||||    
T  19101756 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgattta 19101657  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  19101656 aaccaataagaaagtgagtattagagagagtgttcaaaagag 19101615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 8741356 - 8741230
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||||||||||||||||||  |||| |||||| || ||||||||||||||| || || |||||| |||||||| ||||| | |||| |||||    
T  8741356 ttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtataaacacacaatgatttaaactaataagagagtgagtatt 8741257  T
Q  209 agagagagtgttcaaaagagtgtgttg 235  Q
    ||||| | |||||||||||| ||||||    
T  8741256 agagaaattgttcaaaagagagtgttg 8741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 26980419 - 26980269
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | ||| ||| ||||| |||||||||||||||||||||||||| || |||||||| |  ||||||||||||| | || | ||||||| |||    
T  26980419 caacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatatacatccacaatgatt 26980320  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| |||||| | |||| |||||| |||||||||| ||||||| ||||||    
T  26980319 taaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttg 26980269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 41948302 - 41948160
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||| ||| ||| ||| ||||||||||||||| |||||||||||| | |||| | ||||||  | |||||||||||||||||| | ||||||| ||||    
T  41948302 aacactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgattt 41948203  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||| |||||| | |||| || ||||||||||||||||||||||    
T  41948202 aaatcaataagagagtgagtgttagagagagtgttcaaaagag 41948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 44271942 - 44272076
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| |||| |||||||| |||||||| ||||||||||||||||| | || ||||| ||  | |||||||||||||||||||| | ||||| ||||    
T  44271942 aacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtagaacaacaatgattt 44272041  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||| |||||||||| || |||||||| ||||||||    
T  44272042 aaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 28218185 - 28218053
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||||||||||||||||||  || | |||||| ||||||||||||||||||||||| ||||| | |||||||  ||||| | |||| |    
T  28218185 actcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtagaaccacagtaatttaaattaataagatagtgag 28218086  T
Q  205 tattaga--gagagtgttcaaaagagtgtgttg 235  Q
    |||||||  | ||||||||||||||| ||||||    
T  28218085 tattagagcgggagtgttcaaaagagagtgttg 28218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 32211944 - 32211791
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaatt 181  Q
    |||||||||||| |  | |||| ||||||||||| |||||||||||||||||||| |||| |||||| |  ||||||||| || |||||||||||||||     
T  32211944 tagcaacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatg 32211845  T
Q  182 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||| | ||||   |||| ||| |||||| ||||||| ||||||    
T  32211844 atttaaaccaataagagagtgatcattaaagaaagtgttgaaaagagagtgttg 32211791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 6133758 - 6133632
Alignment:
Q  108 cttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtat 207  Q
    ||||||||||||||||||||| ||||||| || || ||||| || ||||||||||||||| || ||||||||| | |||||||||||| | |||| ||||    
T  6133758 cttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtat 6133660  T
Q  208 tagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||  |||||||||||| ||||||    
T  6133659 tagagaggatgttcaaaagagagtgttg 6133632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 8899049 - 8899180
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    |||||||| || ||| ||| |||||||| || |||||||| ||   |||||| || |||||||||||||||||||  ||||||| ||||||||||||||     
T  8899049 taacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtccacaataatttaaaccaataag 8899148  T
Q  197 aaagtgtgtattagagagagtgttcaaaagag 228  Q
    | |||| |||||||||||||||||||||||||    
T  8899149 agagtgagtattagagagagtgttcaaaagag 8899180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 10659901 - 10659784
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||| |||||||||||||| |||||| || | ||||||  | ||||||||||||||||||||||||| || |||||||||||||| | |||| |||||    
T  10659901 ttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg-gtatt 10659803  T
Q  209 agagagagtgttcaaaaga 227  Q
    ||||| |||||||||||||    
T  10659802 agagaaagtgttcaaaaga 10659784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 11987649 - 11987799
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| |  |||| ||| || ||||||||||||||| ||||||||| | || | || ||| || |||||||||||||||||||||||||||| |||    
T  11987649 caacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgtagacccacaatgatt 11987748  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||| ||| | ||||  ||||||| |||||||| ||||||| ||||||    
T  11987749 taaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttg 11987799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 30679048 - 30678918
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||| | ||||| |||||||||||||||| || | |||||| || ||||||||||||||||||||| |||||| |||||| ||||||| | |||| |    
T  30679048 actctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtgag 30678949  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    | |||||||||||| |||||| || ||||||    
T  30678948 tgttagagagagtgctcaaaaaagagtgttg 30678918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 2225267 - 2225396
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||||||||||||||||||||||| || | |||||| || |||  ||| ||||||||||||| ||| | |||||||||||||| |||||| |    
T  2225267 actcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgag 2225366  T
Q  205 tattagagagagtgttcaaaagagtgtgtt 234  Q
    ||| | | || ||||||||||||| |||||    
T  2225367 tatcacaaagcgtgttcaaaagagagtgtt 2225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 49730887 - 49730995
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | ||||||| ||||||||||| ||| |||  ||| ||||||  |||| |||||| || |||||||||||||||||||||||||||| |||    
T  49730887 caacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgatt 49730986  T
Q  185 taaaccaat 193  Q
    |||||||||    
T  49730987 taaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 228
Target Start/End: Original strand, 15468256 - 15468386
Alignment:
Q  98 aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    |||||| |||||||||||  ||  ||||||||||||||  | || |||||| || ||||||||||| |||||||||||||||| |||||||  |||||||    
T  15468256 aacactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaa 15468355  T
Q  198 aagtgtgtattagagagagtgttcaaaagag 228  Q
     |||  ||||| |||| ||||||||||||||    
T  15468356 gagtaagtatttgagatagtgttcaaaagag 15468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 31866361 - 31866470
Alignment:
Q  107 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 206  Q
    |||||| ||||||||||||||||||||||| |||||||| ||  | ||||||||| |||||||| | ||||||| |||||||| ||||| |||||| |||    
T  31866361 tcttttgttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagta 31866459  T
Q  207 ttagagagagt 217  Q
    ||| |||||||    
T  31866460 ttaaagagagt 31866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 25543364 - 25543511
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtg--gggattcaattttcaaagtgtagacccacaattat 183  Q
    |||||||| | ||||||||||||||||||| |||||||||||| ||||||| || | ||||||  || ||   |||  ||| ||| || | |||||| ||    
T  25543364 aacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgtaggtat---attcccaatgtgcagcctcacaatgat 25543460  T
Q  184 ttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgtt 234  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| |||||    
T  25543461 ttaaaccaataagatagtgagtattagagagagtgttcaaaagagagtgtt 25543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 15523235 - 15523372
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| ||||  |||||||||| || |||| |||||    
T  15523235 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgattta 15523334  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||||    ||  |||||||||||||||||||||||||    
T  15523335 aaccaataa----gttagtattagagagagtgttcaaaagag 15523372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 15531229 - 15531366
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| ||||  |||||||||| || |||| |||||    
T  15531229 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgattta 15531328  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||||    ||  |||||||||||||||||||||||||    
T  15531329 aaccaataa----gttagtattagagagagtgttcaaaagag 15531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 22540393 - 22540530
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||||||| || | ||| || |  ||| |||| ||||||||||| || |||| |||||    
T  22540393 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 22540492  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||||    ||  |||||| ||||||||||||||||||    
T  22540493 aaccaataa----gttagtattaaagagagtgttcaaaagag 22540530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 33114030 - 33114135
Alignment:
Q  121 aaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    |||||| ||||||||| || ||||| ||  | |||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||  || ||||||||||    
T  33114030 aaatcattgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtt 33114129  T
Q  221 caaaag 226  Q
     |||||    
T  33114130 taaaag 33114135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 931417 - 931532
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    |||||||||||| ||| || |||||||||||| |  ||||| || || ||||||||||||| | || ||||||||| |||||||||||||||| ||||      
T  931417 actcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaattttcaaaatatacacccacaatgatttaaaccaataaaagagtgaa 931516  T
Q  205 tattagagagagtgtt 220  Q
    ||||||| | ||||||    
T  931517 tattagaaaaagtgtt 931532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 15928598 - 15928726
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||| |||| |||  |||||||||  || |||||||| |  ||| |||||||| ||||||||  ||| | |||||||||||||||| |||| |    
T  15928598 actcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtgag 15928697  T
Q  205 tattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||  |||||||||||||||||| ||||||    
T  15928698 tatt--agagagtgttcaaaagagagtgttg 15928726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 50539141 - 50539259
Alignment:
Q  81 ttagcaacactcttttt--aacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccaca 178  Q
    |||||||||||| ||||  |||||| ||||||||||||||||||||||| |||||| | || | ||| || || ||||||||||  ||||||||| | ||    
T  50539141 ttagcaacactcatttttcaacactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgca 50539240  T
Q  179 attatttaaaccaataaaa 197  Q
    || |||||||| |||||||    
T  50539241 atgatttaaactaataaaa 50539259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 228
Target Start/End: Original strand, 36566929 - 36567056
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 194  Q
    ||||||||||||| |||||||||||||||||||||||||||  |  | ||| |  || ||| |||||||||||||||| ||| |||||||      ||||    
T  36566929 tttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagatccagaattatt------aata 36567022  T
Q  195 aaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    | | |||| ||||||||||| |||||||||||||    
T  36567023 atagagtgagtattagagagtgtgttcaaaagag 36567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 45179378 - 45179270
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatta 209  Q
    ||||||| || |||||||||||||| | |  | |||||| || |||||||||||||||||| ||||||||| | |||||  ||||| ||| || ||||||    
T  45179378 tttattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtatta 45179279  T
Q  210 gagagagtg 218  Q
    |||||||||    
T  45179278 gagagagtg 45179270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 51732324 - 51732428
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||| |||||||| ||||||| | | |||| ||| || |  || |||||||||||| || ||||||||| |||||||||||||||| |||| |||||    
T  51732324 ttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaacccacaataatttaaaccaataaaagagtgagtatt 51732423  T
Q  209 agaga 213  Q
    |||||    
T  51732424 agaga 51732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 12767413 - 12767342
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||| ||||||||||| || ||| |||||||||||||||| |||| ||||||||||| || ||||||||||    
T  12767413 atttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagagggttttcaaaagag 12767342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 41918033 - 41918104
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    |||| ||||||||||||| |||||||||||||||||| || | ||| || |||||| |||||||||||||||    
T  41918033 cactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagtgtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 27570249 - 27570391
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | | ||||| | ||||||||||| |||||| ||  ||||||| || | |||||| |  || |||||| |||||||| ||||||||| ||||    
T  27570249 aacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgattt 27570348  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
     ||| ||||| ||||||  | | ||||||||||||||||||||    
T  27570349 gaactaataagaaagtgaatttgagagagagtgttcaaaagag 27570391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 29673678 - 29673732
Alignment:
Q  166 gtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    ||||||| | |||||||||||||||||||||||||||  ||||||||||||||||    
T  29673678 gtgtagaactacaattatttaaaccaataaaaaagtgaatattagagagagtgtt 29673732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 32848739 - 32848589
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatt 184  Q
    |||||||| | || |||| ||||||||||||| |||||||| ||||||||| || | ||| || |||||| |||||||||||||||  || ||| | | |    
T  32848739 aacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccattttcaaagtgtaggtcctacattgaat 32848640  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | ||||||||||| |||  ||  |||||| |||| ||||||||| ||||||    
T  32848639 tcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttg 32848589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 13114825 - 13114676
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattt 185  Q
    ||||||| | ||||||| ||||||||||| ||| |||||||| ||||||| || | ||| |  |||||| |||| |||| ||||  ||||||| | ||||    
T  13114825 acactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgattt 13114726  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    || ||||| | | |||| || ||||||||||||| |||||||| ||||||    
T  13114725 aacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttg 13114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 31074751 - 31074863
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||  | ||| ||  ||||| ||||||||| |||||||||||||| | ||| ||||||||     
T  31074751 taacatttactcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttcaaaatgtagacccacaatga-ttagaccaataag 31074849  T
Q  197 aaagtgtgtattag 210  Q
    | |||| |||||||    
T  31074850 agagtgggtattag 31074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 11430467 - 11430614
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattta 186  Q
    |||||||| || |||| ||||||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||| | || ||| | | ||     
T  11430467 cactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaatt- 11430565  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     |||||||||| |||| ||  ||||||||||| ||||||||| ||||||    
T  11430566 caccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttg 11430614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 41095751 - 41095615
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 198  Q
    |||| |||| |||||||| |||||||||||||||||| |  | | |||| || ||| |||||||||||||| | || ||| | |||| | |||||||| |    
T  41095751 cactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaata 41095652  T
Q  199 agtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||  ||||||||||| ||||||||| ||||||    
T  41095651 agtgagtgctagagagagtgctcaaaagagagtgttg 41095615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 37553105 - 37552965
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | || |||||||| | |||||||||||||| ||||| ||||| |  | |||  | || ||  |||||||||||||||| ||||||| ||||    
T  37553105 aacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaatgattt 37553006  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||| |||||| | |||| |||||  | ||||||||||||||||    
T  37553005 aaatcaataagagagtgagtatt--aaagagtgttcaaaagag 37552965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 39039512 - 39039470
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaa 127  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  39039512 caacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 235
Target Start/End: Complemental strand, 13388491 - 13388343
Alignment:
Q  90 ctctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgt--ggggattcaattttcaaagtgtagaccc-acaattattta 186  Q
    ||||||| | |||| ||||||||||||| |||||||||||||||||  || | ||| |  | || ||  |||||||||||||||   | ||| | ||||     
T  13388491 ctcttttgagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttc 13388392  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | |||||||||||||| || ||||||||||| |||||||||| ||||||    
T  13388391 atccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttg 13388343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 228
Target Start/End: Complemental strand, 33060039 - 33059907
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 194  Q
    ||||||| | |||||||||||||||||||| || | |||||| || | | | || || || |||||| |||||||| || ||||||  ||||||||||||    
T  33060039 tttaacagtcactcttttattggatgaaattaaagcatgtcc-accactctctgtgggtttaatttttaaagtgtacactcacaatgttttaaaccaata 33059941  T
Q  195 aaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    | | |||| ||| |||| | ||||||||||||||    
T  33059940 agagagtgggtactagaaaaagtgttcaaaagag 33059907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 3872723 - 3872679
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||    
T  3872723 ttcaatttccaaagtgtagacccacaatgattcaaaccaataaaa 3872679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 11135777 - 11135913
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 198  Q
    |||| ||| ||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||| | || ||| | |||| | |||||||||     
T  11135777 cactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaag 11135876  T
Q  199 agtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||  ||||||||||  ||||||||| ||||||    
T  11135877 agtgagtgctagagagagtcctcaaaagagagtgttg 11135913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 9165340 - 9165379
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctac 139  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  9165340 cactcactcttttattgggtgaaatcaatgtatgtcctac 9165379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 21466681 - 21466634
Alignment:
Q  181 tatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    |||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  21466681 tatttaaatcaataagaaagtgaatattagagagagtgttcaaaagag 21466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 28109906 - 28110040
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagaccc-acaattatttaaaccaataaaaa 198  Q
    |||| ||| ||||||||| ||||||||||| |||| | || ||||| || || ||| |||| ||||||||||| || | ||| |||| | ||||||||||    
T  28109906 cactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccattt-caaagtgtagatcctagaatgatttcatccaataaaaa 28110004  T
Q  199 agtgtgtattagagagagtgttcaaaagagtgtgtt 234  Q
    |||| |||||||||| |||  | ||||||| |||||    
T  28110005 agtgagtattagagaaagtacttaaaagagagtgtt 28110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 39974266 - 39974207
Alignment:
Q  176 acaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||| |||||||||||||| | |||| |||||||| ||| |||||||||||| ||||||    
T  39974266 acaatgatttaaaccaataagagagtgagtattagaaagaatgttcaaaagagagtgttg 39974207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 35336911 - 35337018
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    |||||||||||||||||||||| |  ||    | |||||| || ||||||||||  | ||||||| |||||| |||||||||||||| | |  | |||||    
T  35336911 ttttattggatgaaatcaatgtctcacc----actttgtgtgggttcaattttcttaatgtagacacacaatgatttaaaccaataagagaacgagtatt 35337006  T
Q  209 agagagagtgtt 220  Q
    ||||||||||||    
T  35337007 agagagagtgtt 35337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 37525572 - 37525662
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||| ||||||| ||| | |||||||| | || ||||| || || ||||||||||||||| |||| | ||||| |||||||| |||||    
T  37525572 actctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaataa 37525662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 27464656 - 27464701
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgt 130  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||||||    
T  27464656 caacactatttttaatactcactctttgattggatgaaatcaatgt 27464701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 188
Target Start/End: Original strand, 46335142 - 46335223
Alignment:
Q  107 tcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaa 188  Q
    |||||||||||||||||||||| ||| |||||| | |||||  |  ||  |||||||| || |||||||||||| |||||||    
T  46335142 tcttttattggatgaaatcaatctatatcctaccactttgtcagagttatattttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 46793037 - 46792996
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatca 126  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  46793037 caacactctttttaacacttacttttttattggcttaaatca 46792996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18157093 - 18157049
Alignment:
Q  189 ccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgt 233  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||    
T  18157093 ccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgt 18157049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 39499442 - 39499534
Alignment:
Q  110 tttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtg 202  Q
    |||||| ||| ||||||||||||||| ||  | ||| || |  ||||||||||||| |||||| ||||||| ||||||  |||||| ||||||    
T  39499442 tttattagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataagaaagtg 39499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 26767903 - 26767776
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||||||||||||| |||||||||||||||||||||| || | |||||| || ||||||||||||| ||||||| |||||| |||||||||||||||| |    
T  26767903 cacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgtagactcacaatgatttaaaccaataaaaga 26767804  T
Q  200 gtgtgtattagagagagtgttcaaaaga 227  Q
    ||| |||||||| |||||||||||||||    
T  26767803 gtgagtattagatagagtgttcaaaaga 26767776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 12989214 - 12989364
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| |||  |||| ||||||| |||||||||||||||||||||||| || | |||||  |||||| |||| | ||||||||||||||||| |||    
T  12989214 caacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgtagacccacaatgatt 12989313  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| ||||||    
T  12989314 taaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 12989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 6980277 - 6980127
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| ||||||||||||||||||||||| |||||| |||| | |||||| |  ||||||||||||||| |||||||||||| |||    
T  6980277 caacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagacccacaatgatt 6980178  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | ||| ||||| | |||| |||||||||| |||||||||||||| ||||||    
T  6980177 tcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttg 6980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 9470116 - 9470253
Alignment:
Q  97 taacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaa 196  Q
    ||||||| |||||||||||||||||||||||||||||||| || | |||||  || |||||||||||||||||||||||||||| ||||||||||||||     
T  9470116 taacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataag 9470215  T
Q  197 aaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | ||||  |||||||||| || |||| ||||| ||||||    
T  9470216 agagtgaatattagagagggt-ttcagaagagagtgttg 9470253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 45554590 - 45554732
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | || |||| |||||||||||||||||||||||||||||||| || | ||||        |||||||| ||||||||||||||||| |||    
T  45554590 caacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caattttccaagtgtagacccacaatgatt 45554681  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| ||||||    
T  45554682 taaaccaataagaaagtgagtattagagagaatgttcaaaagagagtgttg 45554732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 38464186 - 38464329
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | | ||| ||||| |||||||| ||||||||||||||||||  |  | |||| | || |||||||||||||||||||||||||||| |||    
T  38464186 caacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatt 38464285  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||||| | |||  |||||||||||||||||||||||||    
T  38464286 taaaccaataagagagtaagtattagagagagtgttcaaaagag 38464329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 30718463 - 30718341
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||||||||||||| || |||||||  | |||||||| |||||  ||||||||||||||||| |||||| |||||||||||||||||||||      
T  30718463 actcttttattggatgaaatcgatatatgtccatc-attttgtgtggattgtattttcaaagtgtagactcacaatgatttaaaccaataaaaaagtgaa 30718365  T
Q  205 tattagagagagtgttcaaaagag 228  Q
    |||||||||||||||  |||||||    
T  30718364 tattagagagagtgtctaaaagag 30718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 15884458 - 15884595
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattta 186  Q
    ||||||| || ||||||||||||||||||||| |||||||||||    || || | |||||| || ||||||||||||| ||||||||||||||||||||    
T  15884458 acactctcttcaacacttactcttttattggacgaaatcaatgt----cccaccactttgtgtgggttcaattttcaaaatgtagacccacaattattta 15884553  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||| | | || ||||||||||  ||| |||||||||    
T  15884554 aaccaataagataatgagtattagagattgtggtcaaaagag 15884595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 44274260 - 44274407
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 187  Q
    |||||| | ||||| | ||||||| ||||||| |||||||||||||||| || | |||||| || ||||| |||||||||||||| ||||||| ||||||    
T  44274260 cactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaa 44274359  T
Q  188 accaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| | |||| || ||||||||| | || ||||||| ||||||    
T  44274360 accaataacagagtgagtgttagagagaatatttaaaagagagtgttg 44274407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 18511351 - 18511256
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||| || || |||||||||||||||| ||||| |||||  |||||||||||||    
T  18511351 cactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaagacctacaatgttttaaaccaataa 18511256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 231
Target Start/End: Original strand, 10981542 - 10981687
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||| | ||||||| ||| || ||||| ||||||  ||||||||||| || | |||||| || ||| |||| ||| ||||||||||||||| ||||    
T  10981542 aacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgattt 10981641  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgt 231  Q
    |||||||||| | |||| ||||||||| |||||||| | |||||||    
T  10981642 aaaccaataagagagtgagtattagagggagtgttctagagagtgt 10981687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 36471995 - 36471863
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||||| | | ||||| | ||| ||||||||||||||||| |||||||  || | ||| |  |||||||||||||||| |||| || |||||| |||    
T  36471995 caacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaaactcacaatgatt 36471896  T
Q  185 taaaccaataaaaaagtgtgtattagagagagt 217  Q
    ||||||||||||| |||| ||||||||||||||    
T  36471895 taaaccaataaaagagtgagtattagagagagt 36471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 85 - 224
Target Start/End: Complemental strand, 37652402 - 37652263
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||| |||||| |||||||| ||||||| |||||||||||||||||| | ||   ||||||    |||||||| ||| |||||||  |||||| |||    
T  37652402 caacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatt 37652303  T
Q  185 taaaccaataaaaaagtgtgtattagagagagtgttcaaa 224  Q
    ||||||||||||||||||  ||| ||||||| ||||||||    
T  37652302 taaaccaataaaaaagtgaatataagagagaatgttcaaa 37652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 11539447 - 11539592
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaat--gtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaatt-a 182  Q
    |||||||||| || |||| ||||||||||||||||||||||||  |||||| | |  | |||||| |  ||| |||||||||||||||| ||| |||| |    
T  11539447 aacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattga 11539546  T
Q  183 tttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||||||||| | |||| ||||||||||||||||  |||||||    
T  11539547 tttaaaccaataagagagtgagtattagagagagtgtgtaaaagag 11539592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 35316538 - 35316409
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtg 204  Q
    ||||||||||| ||| |||| ||||||||||| || ||||| ||  ||||||||||| ||| |||||||||||||| ||||||| |||||| | |||| |    
T  35316538 actcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagagtgag 35316439  T
Q  205 tattagagagagtgttcaaaagagtgtgtt 234  Q
    ||| | | |||||| ||||||||| |||||    
T  35316438 tatcataaagagtgctcaaaagagagtgtt 35316409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 16719587 - 16719463
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatt 184  Q
    ||||||| | |||| ||| |||||||||||| |||||||||||||||| ||| || ||||  ||  | ||||||||||||| ||||||||| |||| |||    
T  16719587 caacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaatgtagacccgcaatgatt 16719488  T
Q  185 taaaccaataaaaaagtgtgtatta 209  Q
    |||||||||| |||| || ||||||    
T  16719487 taaaccaatacaaaaatgagtatta 16719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 25238362 - 25238284
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||  |||||| |||||| ||||||| ||||||    
T  25238362 attttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgctagagaaagtgtttaaaagagagtgttg 25238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 3804607 - 3804743
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgtatgt-cctactattttgtggggattcaattttcaaagtgtagacccacaattat 183  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||| || |  | ||| ||  | || ||||||||||||||| ||||||||| ||    
T  3804607 caacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaattttcaaagtgtacacccacaataat 3804706  T
Q  184 ttaaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    |||||  ||||||| |||  |||||| | ||||||||    
T  3804707 ttaaattaataaaatagtaagtattataaagagtgtt 3804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 15508938 - 15509024
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    |||||||||| ||||||| ||||||||||||  |||||||||||||||||| || ||||| || || ||| |||| |||||||||||    
T  15508938 aacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccatttccaaagtgtaga 15509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 33678271 - 33678138
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||||| ||||||||| ||||| |||| |||||||||||||||| || || |  | | | || ||| ||||  || |||||||| |||||| ||||    
T  33678271 aacactctttataacacttattctttaattgaatgaaatcaatgtatgcccaaccacat-gcgtgggttctatttcaaatgtgtagactcacaataattt 33678173  T
Q  186 aaaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    |||||||||||||||||  |||||||||| |||||    
T  33678172 aaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 34142272 - 34142186
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||||||||||||  |||||||||  |||| |||||| || ||||||||||||||||||||  ||||||  |||||||||||||    
T  34142272 ttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgtagagtcacaatggtttaaaccaataa 34142186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 45270694 - 45270600
Alignment:
Q  104 tactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaa 198  Q
    |||| ||||||||||| |||| |||||||||   ||||||||||| | |||| ||||| |||||||| || |||||| |||||||||||||||||    
T  45270694 tacttttttattggataaaattaatgtatgtatcactattttgtgtgaattcgattttgaaagtgtaaactcacaatgatttaaaccaataaaaa 45270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 7919382 - 7919317
Alignment:
Q  130 tatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    ||||||| || | |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataa 7919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 17188103 - 17188200
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaa 197  Q
    |||| ||| |||||||||||||||||||||| | ||  || | |||||| | | |||||||||||||||||| |||| ||| ||||||||||||||||    
T  17188103 cactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgtaggcccagaatgatttaaaccaataaaa 17188200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 32856277 - 32856142
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaa 199  Q
    |||| |||||||||| ||||||||| ||| |||||   || | |||||| || || ||||||||||||||||| ||| | | |||||||||||||| | |    
T  32856277 cactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggttgaattttcaaagtgtagatccatagtgatttaaaccaataagaga 32856178  T
Q  200 gtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
     || |||||||| || |||||||||| || ||||||    
T  32856177 ttgagtattagaaagggtgttcaaaatagagtgttg 32856142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 2476572 - 2476645
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagac 173  Q
    |||||||||||||||| ||| |||||||||||||||| |||| ||||||    ||||||||||||| |||||||    
T  2476572 cacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaattttcaaaatgtagac 2476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 14489626 - 14489553
Alignment:
Q  155 caattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagag 228  Q
    ||||||| |||||||||| ||||||| |||||||||||||||| | || |||||||||| | | ||||||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaattttcaaaagag 14489553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 43414394 - 43414485
Alignment:
Q  101 acttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaa 192  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||| |    | | ||||||| ||| |||| ||||||| |||||||||||    
T  43414394 acttacttttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaa 43414485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 4552925 - 4552847
Alignment:
Q  157 attttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| ||||||||||||||| |||||||||||||| | |||| |||| ||| | | |||||||||| | ||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttg 4552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 14489676 - 14489722
Alignment:
Q  160 ttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgta 206  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||    
T  14489676 ttcaaagtgtagactcacaataatttaaatcaataaaaaagtgtgta 14489722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 24497218 - 24497344
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 187  Q
    |||||| ||||||| |  || |||||||||||||||  ||||||||| | |  |||||||| |||||  |||||||||||||||||| | | | ||||||    
T  24497218 cactctctttaacagtcgcttttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgtagaccaagagtgatttaa 24497317  T
Q  188 accaataaaaaagtgtgtattagagag 214  Q
    || ||||  | |||| |||||||||||    
T  24497318 actaataggagagtgagtattagagag 24497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 472323 - 472178
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaatt 181  Q
    |||||||| ||||| ||| ||||| | ||| ||||||| ||||||   ||||||  | || |||||| |  ||||||||||||| | || | |||||||     
T  472323 tagcaacattctttctaatacttattttttaattggatcaaatcagcatatgtctcattactttgtgtgagttcaattttcaaaatatatatccacaatg 472224  T
Q  182 atttaaaccaataaaaaagtgtgtattagagagagtgttcaaaaga 227  Q
    |||||||||||||| | || | |||||| |||||||| ||||||||    
T  472223 atttaaaccaataagagagcgagtattaaagagagtgctcaaaaga 472178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 4964815 - 4964686
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaa 198  Q
    |||| ||| ||||||||| |||||||||||||||||| || | ||| || |||||  |||||||||||||| | || ||| | || | | |||||||||     
T  4964815 cactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcattttcaaagtgtaggtcctacattgatcttatccaataaaag 4964716  T
Q  199 agtgtgtattagagagagtgttcaaaagag 228  Q
    |||| ||  |||||||||| ||||||||||    
T  4964715 agtgagtgctagagagagtattcaaaagag 4964686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 41805923 - 41805882
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcc 136  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  41805923 tttaacactcactcttttattggataaaatcaatgtatgtcc 41805882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 24895404 - 24895280
Alignment:
Q  105 actcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgt 203  Q
    ||||||||| ||||| |||||||||||| | | || ||||| || |  ||| |||| ||||||||| |||||||| | |||||| ||||| ||| ||||     
T  24895404 actcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaagagtga 24895305  T
Q  204 gtattagagagagtgttcaaaagag 228  Q
    || ||||||||||| | ||||||||    
T  24895304 gtgttagagagagtatccaaaagag 24895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 25730595 - 25730479
Alignment:
Q  86 aacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattattt 185  Q
    |||||||||| ||||||| ||| |||||||||||| |||  |||||||||  || || || || || ||| ||||| || ||||| || |||| | ||||    
T  25730595 aacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcacagtgattt 25730496  T
Q  186 aaaccaataaaaaagtg 202  Q
    |||||||||||| ||||    
T  25730495 aaaccaataaaagagtg 25730479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 28898179 - 28898043
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga-cccacaattatttaaaccaataaaaa 198  Q
    |||| ||||||||||||| |||||||||||||||||| || | ||| || || ||  |||| ||||||||||| || ||| | |||| | |||||||||     
T  28898179 cactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatccaataaaag 28898080  T
Q  199 agtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| ||  || |||||||  ||||||||| ||||||    
T  28898079 agtgagtgctaaagagagtactcaaaagagagtgttg 28898043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 37719860 - 37719903
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgta 131  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  37719860 cactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 42182927 - 42182998
Alignment:
Q  100 cacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtag 171  Q
    |||| ||||||||||||| |||||||||||||||||| || | ||| || || ||| |||| ||||||||||    
T  42182927 cactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 42182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 19639184 - 19639226
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  19639184 ttcaattttcaaagtgcagacctacaatgatttaaaccaataa 19639226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 19837777 - 19837819
Alignment:
Q  153 ttcaattttcaaagtgtagacccacaattatttaaaccaataa 195  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  19837777 ttcaattttcaaagtgcagacctacaatgatttaaaccaataa 19837819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 28898061 - 28898103
Alignment:
Q  89 actctttttaacacttactcttttattggatgaaatcaatgta 131  Q
    ||||| |||| |||| |||||||||||||||||||||||||||    
T  28898061 actctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 42579817 - 42579771
Alignment:
Q  82 tagcaacactctttttaacacttactcttttattggatgaaatcaat 128  Q
    |||||||||||| |  |||||| ||||||||||||||||||||||||    
T  42579817 tagcaacactctctcaaacactcactcttttattggatgaaatcaat 42579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 80444 - 80403
Alignment:
Q  176 acaattatttaaaccaataaaaaagtgtgtattagagagagt 217  Q
    ||||| |||||||||||||||||| || ||||||||||||||    
T  80444 acaataatttaaaccaataaaaaaatgagtattagagagagt 80403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 11729760 - 11729715
Alignment:
Q  85 caacactctttttaacacttactcttttattggatgaaatcaatgt 130  Q
    ||||||||||| ||||| ||| |||||||||| |||||||||||||    
T  11729760 caacactctttctaacatttattcttttattgaatgaaatcaatgt 11729715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 220
Target Start/End: Complemental strand, 31395599 - 31395466
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgta-gacccacaattattta 186  Q
    |||||| |||| |||| |||| |||||||| ||||||||||||||||||  | | ||| || |||||| |||| || |||||| | || ||| ||||||     
T  31395599 cactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattccatttccatagtgtaggtcctacatttatttc 31395500  T
Q  187 aaccaataaaaaagtgtgtattagagagagtgtt 220  Q
    | ||||||||| | || ||  |||||||||||||    
T  31395499 acccaataaaagattgagtgctagagagagtgtt 31395466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 30849284 - 30849384
Alignment:
Q  109 ttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtatt 208  Q
    ||||||| ||||||||||||||| |||| || | |||||  || ||| ||||| ||||  || | ||||||| ||||||| |||||| |||||| |||||    
T  30849284 ttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatt 30849383  T
Q  209 a 209  Q
    |    
T  30849384 a 30849384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 27845 - 27985
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaaaccaata 194  Q
    |||| |||| || ||||||||||||| ||||||||||||||| || | |||||| || ||| |||| ||||||||||||||||||| |||||||||||||    
T  27845 tttagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaata 27944  T
Q  195 aaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    | | |||| |||||| |||||||||||||||||| ||||||    
T  27945 agagagtgagtattaaagagagtgttcaaaagagggtgttg 27985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 9675 - 9797
Alignment:
Q  73 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    |||||||  |||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||| || |||||||| || ||||||||| ||||||||||    
T  9675 gaggaatgctagcaacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtaga 9774  T
Q  173 cccacaattatttaaaccaataa 195  Q
    | |||||| |||||||| |||||    
T  9775 ctcacaataatttaaacgaataa 9797  T

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Target: scaffold0492 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 11221 - 11343
Alignment:
Q  73 gaggaatattagcaacactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtaga 172  Q
    |||||||  |||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||| || |||||||| || ||||||||| ||||||||||    
T  11221 gaggaatgctagcaacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtaga 11320  T
Q  173 cccacaattatttaaaccaataa 195  Q
    | |||||| |||||||| |||||    
T  11321 ctcacaataatttaaacgaataa 11343  T

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Target: scaffold0204 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 27016 - 26879
Alignment:
Q  88 cactctttttaacacttactcttttattggatgaaatcaatgtatgtcctactattttgtggggattcaattttcaaagtgtagacccacaattatttaa 187  Q
    |||||| ||||||||| ||||| ||||||||  |||||||||||||| | || | |||||| || |||||||||||||| ||||||||| |||  |||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 26917  T
Q  188 accaataaaaaagtgtgtattagagagagtgttcaaaa 225  Q
    |||||||||| ||||  | ||||||| |||| ||||||    
T  26916 accaataaaagagtggatgttagagaaagtgctcaaaa 26879  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 204796 - 204715
Alignment:
Q  154 tcaattttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||||||| ||| |||||||  |||||||| ||||||||||||| |||| ||| |||||||| ||||||||| || ||||||    
T  204796 tcaatttttaaattgtagacttacaattatataaaccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttg 204715  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 8494 - 8418
Alignment:
Q  159 tttcaaagtgtagacccacaattatttaaaccaataaaaaagtgtgtattagagagagtgttcaaaagagtgtgttg 235  Q
    |||| |||||||||| || ||| |||||||||||||||| | |  |||||| ||||||| |||||||||| ||||||    
T  8494 tttcgaagtgtagactcataatgatttaaaccaataaaagaattagtattaaagagagtattcaaaagagagtgttg 8418  T

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Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 8562 - 8522
Alignment:
Q  95 tttaacacttactcttttattggatgaaatcaatgtatgtc 135  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  8562 tttaacatttactcttttatgggatgaaatcaatatatgtc 8522  T

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Target: scaffold0886 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 3340 - 3397
Alignment:
Q  157 attttcaaagtgta-gacccacaattatttaaaccaataaaaaagtgtgtattagagag 214  Q
    |||||||||||||| |||||||||| ||||||| ||||||| |||||||| ||||||||    
T  3340 attttcaaagtgtaagacccacaatgatttaaa-caataaacaagtgtgtgttagagag 3397  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 15021 - 14972
Alignment:
Q  87 acactctttttaacacttactcttttattggatgaaatcaatgtatgtcc 136  Q
    ||||||| ||||| ||||||||||||||||  |||||| |||||||||||    
T  15021 acactctctttaatacttactcttttattgagtgaaattaatgtatgtcc 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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