View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2947-Insertion-3 (Length: 383)
Name: NF2947-Insertion-3
Description: NF2947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2947-Insertion-3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 8 - 383
Target Start/End: Complemental strand, 45070621 - 45070238
Alignment:
| Q |
8 |
gaacacttttcactttacaaactcattttgtaggattgaattaaaattgcaatttgagcttatcctaaattgttcatgccgcttgctatattttatgtat |
107 |
Q |
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| T |
45070621 |
gaacacttttcactttacaaactcattttgtaggattgaattaaaattgcaatttgagcttatcctaaattgttcatgccgcttgctatattttatgtat |
45070522 |
T |
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| Q |
108 |
caagtcgattttgtaaagtcgtgtcagacttaaaatccaagaatacacattgctaggtacgtgcaacctaggtggtacgaactttggctgtcgggggact |
207 |
Q |
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| T |
45070521 |
caagtcgattttgtaaagtcgtgtcagacttaaaatccaagaatacacattgctaggtacgtgcaacctaggtggtacgaactttggctgtcgggggact |
45070422 |
T |
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| Q |
208 |
cgacacgaactatattgagagacaatattaaaaataaaaacatcttagggcaagaattcagacaaattcgc--------nnnnnnnncacaagtaaccaa |
299 |
Q |
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| T |
45070421 |
cgacacgaactatattgagagccaatattaaaaataaaaacatcttagggcaagaattcagacaaattcgcaaaaaaaaaaaaaaaacacaagtaaccaa |
45070322 |
T |
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| Q |
300 |
ataagtttgaaggctttgttggtggatacatgggtgtccctgtcaggctggcttgcttcatgttattcgaatattctacttatt |
383 |
Q |
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|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
45070321 |
ataagtttgaaggctttgttggtggatacatgggtggcactgtcaggctggcttgcttcatgttattcgaacattctacttatt |
45070238 |
T |
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