View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2947_high_7 (Length: 250)
Name: NF2947_high_7
Description: NF2947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF2947_high_7 |
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[»] scaffold0204 (1 HSPs) |
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[»] scaffold0047 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 27270162 - 27269952
Alignment:
Q |
13 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaa |
112 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||||||| |
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|
T |
27270162 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgaccaattgttcacgtggttgataaaattaagtcaatcactttcatgtggttgaa |
27270063 |
T |
|
Q |
113 |
ggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttctttagttac |
212 |
Q |
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|
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||| |||||||||||| |
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|
T |
27270062 |
ggcgaaatttccttcacttcccttcaattatcatggttggtggcttagtccattcacaattttggacatatgctaatagttatttgttttctttagttaa |
27269963 |
T |
|
Q |
213 |
tgctttttgtt |
223 |
Q |
|
|
||||||||||| |
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|
T |
27269962 |
tgctttttgtt |
27269952 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 21205050 - 21204831
Alignment:
Q |
16 |
tctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaaggc |
115 |
Q |
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|||||||| ||| |||||||| |||||||||| |||||||||| |||| |||| ||||||||||||||||| || ||| ||||||||||||||| || |
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|
T |
21205050 |
tctggaaataaataaataacaggctctttaaaagcactcaatgactaatt-ttcagatggttgataaaattaagtcaatcactttcatgtggttgaatgc |
21204952 |
T |
|
Q |
116 |
gaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttctttagttactgc |
215 |
Q |
|
|
||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| ||| |
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|
T |
21204951 |
gaaattttcttcacttcccttcaattatcatggttggtggcttagttcattcacaattttggacataggctaatagttatttgttttctttagttaatgc |
21204852 |
T |
|
Q |
216 |
tttttgtttttactgtaaata |
236 |
Q |
|
|
|||||||| |||||||||||| |
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|
T |
21204851 |
tttttgttgttactgtaaata |
21204831 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 30972548 - 30972343
Alignment:
Q |
9 |
tggaaaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggt |
108 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||| |||| | || |||||| | || |||||||||||||||||| | || | |||||||||| |
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|
T |
30972548 |
tggaaaatttggaaagaaagaaataacatgctctttaatggcaaagagtgctcaattatgcaggtggttgataaaattaagtcgctgactttcatgtggc |
30972449 |
T |
|
Q |
109 |
tgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttctttag |
208 |
Q |
|
|
||||||||||||||||||| ||||| ||||| |||||||| |||||| |||||| ||||| ||||| |||||| |||||||||||||||||||||||| |
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|
T |
30972448 |
tgaaggcgaaatttccttctcttcccttcaactatcatggctggtggcttagtcatttcactatttttggcataggctaatagttatttgctttctttag |
30972349 |
T |
|
Q |
209 |
ttactg |
214 |
Q |
|
|
| |||| |
|
|
T |
30972348 |
tcactg |
30972343 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 48336967 - 48337081
Alignment:
Q |
77 |
tgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttg |
176 |
Q |
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|
||||||||||||| | || | |||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||| ||||||| || || |
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T |
48336967 |
tgataaaattaagtcgctaactttcatgtggttgaaggcgaaatttccttctcttcccttcaatcatcatagttggtggtttagttcattcactatatta |
48337066 |
T |
|
Q |
177 |
agcatagactaatag |
191 |
Q |
|
|
|||||| ||||||| |
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|
T |
48337067 |
ggcataggctaatag |
48337081 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 29521759 - 29521661
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||||||||||||||||||||| | |||| ||||| ||||||||||||| ||||||||||| ||| |||||||| ||| |||| ||||| ||||||||| |
|
|
T |
29521759 |
ttcatgtggttgaaggcgaaatgtgcttctcttcctttcaattatcatgattggtggtttaatccgttcacaatgttgggcattgactagtagttattt |
29521661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 37772851 - 37773048
Alignment:
Q |
9 |
tggaaaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggt |
108 |
Q |
|
|
|||||||| || ||| ||| |||||||| |||| ||||||| ||||| || ||||||| |||||||||| |||||| | |||| |||| | |||| |
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|
T |
37772851 |
tggaaaatttgaaaataaacaaataacagaatcttcaaaggcaaataatgtacagttgttcagatggttgataacattaagtcgctcactttcttatggt |
37772950 |
T |
|
Q |
109 |
tgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttcttt |
206 |
Q |
|
|
|||| |||||||||||| ||||| |||||||| |||||||||||| ||||||| ||||| |||||| |||| | |||| ||||||||| |||||| |
|
|
T |
37772951 |
tgaaaaagaaatttccttctcttcccttcaattaccatggttggtggcttagtcctttcaccattttgggcattggttaattgttatttgcattcttt |
37773048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 8831036 - 8830898
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
|||||||| ||||||||| | |||| ||| |||| |||||||| |||||||| || ||||| |||||||| |||| |||||| ||| ||| ||||| | |
|
|
T |
8831036 |
gtggttgacaaaattaagtcgctcacttttatgtagttgaaggagaaatttctttatcttcccttcaattaccatgactggtggcttattcctttcacca |
8830937 |
T |
|
Q |
172 |
ttttgagcatagactaatagttatttgctttctttagtt |
210 |
Q |
|
|
||||||||| | |||| |||||||| ||||||||||| |
|
|
T |
8830936 |
atttgagcatcggttaatcgttatttgttttctttagtt |
8830898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 53650500 - 53650413
Alignment:
Q |
102 |
atgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaat |
189 |
Q |
|
|
||||||||||||||||| ||| || | ||||| |||||||| |||| ||| ||| |||||||||||||||| ||| ||| ||||||| |
|
|
T |
53650500 |
atgtggttgaaggcgaagtttactacccttcctttcaattaccatgcttgatggcttagtccattcacaatgttggacattgactaat |
53650413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 22653289 - 22653379
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtc |
162 |
Q |
|
|
||||||||||| ||||| | |||| || ||||||||||||||||||||| ||| || | ||||||||||||||||||||| |||||| |
|
|
T |
22653289 |
gtggttgataagattaaatcgctcacatttatgtggttgaaggcgaaatttgcttacattaccttcaattatcatggttggtggcttagtc |
22653379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 25130597 - 25130447
Alignment:
Q |
13 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaa |
112 |
Q |
|
|
|||| ||||||||||| || |||| | | ||||| || || |||| |||||||| || ||||| ||||| || ||| | ||| ||||||||||||||| |
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|
T |
25130597 |
aaatatggaaagaaaggaacaacaagttgtttaagggaacaaaatgctcaattgtgcaagtggtcgataagatcaagtccctcgctttcatgtggttgaa |
25130498 |
T |
|
Q |
113 |
ggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtcc |
163 |
Q |
|
|
|| ||||||| || | ||| | |||| ||||||||||||||| ||||||| |
|
|
T |
25130497 |
ggagaaatttgctactctttccctcaactatcatggttggtggcttagtcc |
25130447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 9831418 - 9831483
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcac |
169 |
Q |
|
|
|||||||||||||||||| | ||||||| |||||||||||||| |||||| ||||||| ||||| |
|
|
T |
9831418 |
gtggttgaaggcgaaattcgttacacttcccttcaattatcatggctggtggcttagtccgttcac |
9831483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 5727131 - 5727215
Alignment:
Q |
78 |
gataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtc |
162 |
Q |
|
|
|||||||||||||| || | |||||||||||||||| |||||| |||| || || |||||||||||||||| ||| |||||| |
|
|
T |
5727131 |
gataaaattaagccgcttacattcatgtggttgaagggaaaatttgcttctctccctctcaattatcatggttgatggcttagtc |
5727215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 29969876 - 29969971
Alignment:
Q |
102 |
atgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||||||||||||||||||||| || | ||||| ||| | | | ||||||||||| ||||||| ||||| || | ||||||||||||||||||| |
|
|
T |
29969876 |
atgtggttgaaggcgaaatttactactcttcccttctacttttatggttggtggcttagtccgttcaccatgatagacatagactaatagttattt |
29969971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 42527407 - 42527341
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcaca |
170 |
Q |
|
|
||||||||||| ||||||| || | ||||| | ||||||||||||||||||| ||| ||| |||||| |
|
|
T |
42527407 |
gtggttgaaggtgaaattttctactcttccttccaattatcatggttggtggcttaatccgttcaca |
42527341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 5760994 - 5761067
Alignment:
Q |
78 |
gataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttg |
151 |
Q |
|
|
|||||||||||||| || | |||||||||||||||| |||||| |||| || || |||||||||||||||| |
|
|
T |
5760994 |
gataaaattaagccgcttacattcatgtggttgaagggaaaatttgcttctctccctctcaattatcatggttg |
5761067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 9831323 - 9831360
Alignment:
Q |
9 |
tggaaaatctggaaagaaagaaataacatgctctttaa |
46 |
Q |
|
|
|||||||| ||||||||||||||||||||||| ||||| |
|
|
T |
9831323 |
tggaaaatttggaaagaaagaaataacatgctgtttaa |
9831360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 20510395 - 20510492
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcac |
169 |
Q |
|
|
||||||||||| |||||| | || ||| ||||||||||||| ||||||| | ||||| ||||||| ||||||||||||| ||||||| ||||| |
|
|
T |
20510395 |
gtggttgataagattaagtccatctcttttatgtggttgaaggtgaaatttaacacgcttcccttcaattttcatggttggtggcttagtccgttcac |
20510492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 25845591 - 25845759
Alignment:
Q |
13 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaa |
112 |
Q |
|
|
|||| |||||||||||||| ||||| | |||||||||| | |||||||||||||| |||||||||||||||||| | ||| ||||||||||||||| |
|
|
T |
25845591 |
aaatttggaaagaaagaaacaacatattatttaaaggcaaagattgttcaattgttcaggtggttgataaaattaagtcgctctctttcatgtggttgaa |
25845690 |
T |
|
Q |
113 |
ggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcat |
181 |
Q |
|
|
|||||| |||||||| || || || || || |||||||||||| ||||||||| ||| |||||| |||| |
|
|
T |
25845691 |
ggcgaagtttccttctctgcccttgaactaccatggttggtggcttagtccatacaccattttgggcat |
25845759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 25408797 - 25408891
Alignment:
Q |
103 |
tgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||||||||||||||||||| ||||| || | ||||||||||||||||||||| |||||||||| || || ||| | |||| ||||| ||||||| |
|
|
T |
25408797 |
tgtggttgaaggcgaaattcacttcaatttccttcaattatcatggttggtggcttagtccatttaccatgttgggtataggctaattgttattt |
25408891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 36803190 - 36803275
Alignment:
Q |
102 |
atgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagacta |
187 |
Q |
|
|
||||||||||||||||| ||| | | |||| ||||||| ||||| ||||||| ||||||| |||||||| |||||||| ||||| |
|
|
T |
36803190 |
atgtggttgaaggcgaagtttaccactattcctttcaattttcatgcttggtggcttagtccgttcacaatgttgagcattgacta |
36803275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 47161022 - 47161078
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttag |
160 |
Q |
|
|
||||||||||| ||| |||||||| ||||| |||||||| |||||||||||| |||| |
|
|
T |
47161022 |
gtggttgaaggtgaagtttccttctcttccattcaattaccatggttggtggcttag |
47161078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 18650901 - 18650974
Alignment:
Q |
78 |
gataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttg |
151 |
Q |
|
|
|||||||||||||| || | |||||||||||||||| |||||| |||| || || |||||||||||||||| |
|
|
T |
18650901 |
gataaaattaagccgcttacattcatgtggttgaagggaaaatttgcttctctccctctcaattatcatggttg |
18650974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 18690326 - 18690399
Alignment:
Q |
78 |
gataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttg |
151 |
Q |
|
|
|||||||||||||| || | |||||||||||||||| |||||| |||| || || |||||||||||||||| |
|
|
T |
18690326 |
gataaaattaagccgcttacattcatgtggttgaagggaaaatttgcttctctccctctcaattatcatggttg |
18690399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 44675097 - 44675222
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||| || | | |
|
|
T |
44675097 |
gtggttgataagattaagccacttgcattcatgtggttgaaggcgaaatttgcttcccttcccttcaattatcatggttggtggcttagtccgtttatca |
44675196 |
T |
|
Q |
172 |
ttttgagcatagactaatagttattt |
197 |
Q |
|
|
| ||| |||||||||||||||||||| |
|
|
T |
44675197 |
tgttgggcatagactaatagttattt |
44675222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 9484878 - 9484972
Alignment:
Q |
103 |
tgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||| ||| |||| ||||| | ||||||| |
|
|
T |
9484878 |
tgtggttgaaggcgaaatttgtttctcttcccttcaattatcatggttggtggtttagtcagttcacaatgttgggcatcgactagttgttattt |
9484972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 31069674 - 31069780
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttg |
198 |
Q |
|
|
|||||||||||||||||||||||| | || ||||| || ||||||||||| |||| ||||| ||| || || || |||||||| ||||| ||||||||| |
|
|
T |
31069674 |
ttcatgtggttgaaggcgaaatttgcctctcttccattaaattatcatggatggtagtttaatccgtttactatgttgagcattgactagtagttattt- |
31069772 |
T |
|
Q |
199 |
ctttcttt |
206 |
Q |
|
|
|||||||| |
|
|
T |
31069773 |
ctttcttt |
31069780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 4889452 - 4889577
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
|||||||||||||||||| | || ||||||||||| |||||||| || ||||| ||||| || || |||||||| ||||| ||||||||||||| | |
|
|
T |
4889452 |
gtggttgataaaattaagtcgcttgcattcatgtggttcaaggcgaagttcccttctcttccctttaactatcatgggtggtgacttagtccattcacta |
4889551 |
T |
|
Q |
172 |
ttttgagcatagactaatagttattt |
197 |
Q |
|
|
||||| ||||| |||| |||||||| |
|
|
T |
4889552 |
ttttggacataggctaaaagttattt |
4889577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 26260785 - 26260847
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
||||||||||||||| ||| |||| ||||| |||||||||||||| |||||| |||||||||| |
|
|
T |
26260785 |
gtggttgaaggcgaagtttgcttctcttcccttcaattatcatgggtggtggcttagtccatt |
26260847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 52626535 - 52626633
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||||||||||| |||| ||||| ||| ||||| ||||||||||||||||||||| |||||||||| || || ||| | |||| ||||| ||||||| |
|
|
T |
52626535 |
ttcatgtggttggaggcaaaattcgtttctcttcccttcaattatcatggttggtggcttagtccatttaccatattgcgtataggctaattgttattt |
52626633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 34703584 - 34703454
Alignment:
Q |
67 |
ttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
|||| ||||||||||| |||||| | |||| ||| ||||||||||||||||||| | | | ||||| || || | ||||||||||||| | ||| | || |
|
|
T |
34703584 |
ttcaggtggttgataagattaagtccctcacttttatgtggttgaaggcgaaatatgcaactcttccctttaactttcatggttggtggctaagttcgtt |
34703485 |
T |
|
Q |
167 |
cacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||| || ||| ||||| ||||||||||||| |
|
|
T |
34703484 |
caccatgttggacataggctaatagttattt |
34703454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 36098662 - 36098593
Alignment:
Q |
127 |
cacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatt |
196 |
Q |
|
|
||||||| |||||||||||||| |||||| ||||||| ||||| || ||| |||||| |||| ||||||| |
|
|
T |
36098662 |
cacttcccttcaattatcatggctggtggcttagtccgttcaccatgttgggcataggctaagagttatt |
36098593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 10686211 - 10686161
Alignment:
Q |
143 |
tcatggttggtggtttagtccattcacaattttgagcatagactaatagtt |
193 |
Q |
|
|
|||||||||||||||| |||| |||||||| ||| |||||| ||||||||| |
|
|
T |
10686211 |
tcatggttggtggttttgtccgttcacaatgttgggcataggctaatagtt |
10686161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 8462661 - 8462475
Alignment:
Q |
20 |
gaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaa |
119 |
Q |
|
|
||||||||||||||||| | | || ||||||| ||||||| |||| || ||||||||||| |||||| |||||| ||||||||||||||||||||| |
|
|
T |
8462661 |
gaaagaaagaaataaca-gatattcaaaggcaaagaatgttcggttgtgcaggtggttgataagattaagtcactcacattcatgtggttgaaggcgaaa |
8462563 |
T |
|
Q |
120 |
tttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttcttta |
207 |
Q |
|
|
||| |||| ||||| ||||||||||||||||||||| |||||| || || || ||| ||||| ||||| ||||||| |||||||| |
|
|
T |
8462562 |
tttgcttctcttcccttcaattatcatggttggtggcttagtctgtttaccatgatgaacataggctaattgttatttcttttcttta |
8462475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 39435550 - 39435461
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtc |
162 |
Q |
|
|
||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||| |||| |
|
|
T |
39435550 |
gtggttgataagattaagtcactcgagttcatgtggttgaaggcgaaatttgcttctcttcctttc-attatcatggttggtggttgagtc |
39435461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 16840328 - 16840416
Alignment:
Q |
97 |
ttttcatgtggttgaaggcgaaatttccttcacttccgttcaat--tatcatggttggtggtttagtccattcacaattttgagcatag |
183 |
Q |
|
|
|||||||||||||||||| ||||| |||| ||||| |||||| ||||||| ||||||| |||| |||||||| |||||| |||||| |
|
|
T |
16840328 |
ttttcatgtggttgaaggagaaatactcttctcttcccttcaattatatcatgcttggtggcttagcccattcaccattttgggcatag |
16840416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 37929141 - 37929206
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcac |
169 |
Q |
|
|
||||||||||| |||||||||| | ||||| || || ||||||||||||||| ||||||| ||||| |
|
|
T |
37929141 |
gtggttgaaggtgaaatttcctactcttccctttaactatcatggttggtggcttagtccgttcac |
37929206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 21523889 - 21523944
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtg |
154 |
Q |
|
|
|||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||| |
|
|
T |
21523889 |
ttcatgtggttgaaagcgaagtttccatctcttcccttcaactatcatggttggtg |
21523944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 5048491 - 5048585
Alignment:
Q |
75 |
gttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcac |
169 |
Q |
|
|
|||||||| |||||||| ||| ||| ||||||||||||| |||||| | | ||||| ||||| | ||||||||||||| ||||||| ||||| |
|
|
T |
5048491 |
gttgataagattaagcccctctcttttatgtggttgaaggtgaaattaaatacgcttcccttcaactttcatggttggtggcttagtccgttcac |
5048585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 33191268 - 33191203
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcac |
169 |
Q |
|
|
|||||||||| ||||||| | | ||||| ||||||||||||||||||||| ||||||| ||||| |
|
|
T |
33191268 |
gtggttgaagttgaaatttgatactcttcccttcaattatcatggttggtggcttagtccgttcac |
33191203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 33282823 - 33282908
Alignment:
Q |
78 |
gataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtcc |
163 |
Q |
|
|
|||||||||||| | || | ||| | ||||||||||| |||||| |||| || || |||||||||||||||||||| ||||||| |
|
|
T |
33282823 |
gataaaattaagtcgcttacttttaggtggttgaaggaaaaatttgcttctctccctctcaattatcatggttggtggcttagtcc |
33282908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0204 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0204
Description:
Target: scaffold0204; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 24489 - 24603
Alignment:
Q |
77 |
tgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttg |
176 |
Q |
|
|
||||||||||||| | || | |||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||| ||||||| || || |
|
|
T |
24489 |
tgataaaattaagtcgctaactttcatgtggttgaaggcgaaatttccttctcttcccttcaatcatcatagttggtggtttagttcattcactatatta |
24588 |
T |
|
Q |
177 |
agcatagactaatag |
191 |
Q |
|
|
|||||| ||||||| |
|
|
T |
24589 |
ggcataggctaatag |
24603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 22469424 - 22469549
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||| |||||||||||| | ||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||||||| | |
|
|
T |
22469424 |
gtggtagataaaattaagtcgctcgctttcatgtggttgaaggataaatacccttctcttcccttcaattatcatgcttggtggcttagtccattcacca |
22469523 |
T |
|
Q |
172 |
ttttgagcatagactaatagttattt |
197 |
Q |
|
|
|||||||||||| |||| ||||||| |
|
|
T |
22469524 |
ttttgagcataggttaattgttattt |
22469549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 9907160 - 9907285
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||| |||||||||||| | ||| ||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||||| ||| ||||||||| | |
|
|
T |
9907160 |
gtggtagataaaattaagtcgctcgctttcatgtggttgaaggagaaatacccttctattcccttcaattatcatgcgtggtggcttaatccattcacca |
9907259 |
T |
|
Q |
172 |
ttttgagcatagactaatagttattt |
197 |
Q |
|
|
|||| |||||| ||||| ||||||| |
|
|
T |
9907260 |
ttttaggcataggctaattgttattt |
9907285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 222
Target Start/End: Complemental strand, 14216181 - 14215967
Alignment:
Q |
8 |
atggaaaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtgg |
107 |
Q |
|
|
|||| |||| ||||||||||| ||||| | | | ||||| |||| |||| |||||||| || ||| |||||||| ||||| | || | ||||||||| |
|
|
T |
14216181 |
atgggaaatatggaaagaaaggaataatagggtatttaatggcaaagaatgctcaattgtgcaggtgattgataaagttaagtcgctgacgttcatgtgg |
14216082 |
T |
|
Q |
108 |
ttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttcttta |
207 |
Q |
|
|
|||||| |||||||||||| |||| ||| | |||||| |||||||| ||| || || || || ||| | |||| |||||||||||| |||||||||| |
|
|
T |
14216081 |
ttgaagaagaaatttccttctcttctcttcgactatcatagttggtggcttaacccttttaccatgttgggaataggctaatagttattggctttcttta |
14215982 |
T |
|
Q |
208 |
gttactgctttttgt |
222 |
Q |
|
|
| |||| ||||||| |
|
|
T |
14215981 |
ctcactgttttttgt |
14215967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 34714914 - 34715042
Alignment:
Q |
69 |
cacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattca |
168 |
Q |
|
|
|||||||||||||| |||||| | |||| ||| | ||||||||| || |||||| |||| ||||| ||||||| |||||||||||| |||||| || | |
|
|
T |
34714914 |
cacgtggttgataagattaagtctctcacttttaggtggttgaaagcaaaatttacttctcttcccatcaattaccatggttggtggcttagtctgttta |
34715013 |
T |
|
Q |
169 |
caattttgagcatagactaatagttattt |
197 |
Q |
|
|
| || || ||||||||||||||||||| |
|
|
T |
34715014 |
ccatactggacatagactaatagttattt |
34715042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 11324501 - 11324560
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtcc |
163 |
Q |
|
|
||||||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||||| |
|
|
T |
11324501 |
gtggttgaaggcgaaatttgcttctcttcccttcaattatcatgggtggtggcttagtcc |
11324560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 17292836 - 17292772
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtcc |
163 |
Q |
|
|
|||||||||||||| || |||||| |||| ||||| ||||||||||||||||| ||| ||||||| |
|
|
T |
17292836 |
ttcatgtggttgaacgccaaatttgcttctcttcccttcaattatcatggttgatggcttagtcc |
17292772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 2682796 - 2682889
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||||||||||| |||||||||| | ||| ||||||| ||||||||||||| ||||||| ||||| || ||||||||| ||| |||||||| |
|
|
T |
2682796 |
gtggttgaaggtgaaatttcctactattctcttcaattgtcatggttggtggcttagtcctttcaccatgctgagcataggttaaaagttattt |
2682889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 7155453 - 7155546
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||||||||||| |||||| |||| || || |||||||||||| | |||||||||||||| ||||| | ||||||||| |||| |||||||| |
|
|
T |
7155453 |
gtggttgaaggaaaaattttcttctctacccttcaattatcatagatggtggtttagtccgttcaccgtactgagcataggctaagagttattt |
7155546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 12688220 - 12688314
Alignment:
Q |
103 |
tgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||||||||||| ||||||| || | ||||| || |||| ||||| |||||| ||||||| ||| |||| ||| |||||| ||||| ||||||| |
|
|
T |
12688220 |
tgtggttgaaggagaaatttactactcttccctttaatttacatggctggtggcttagtccgttcgcaatgttgggcataggctaattgttattt |
12688314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 35590166 - 35590357
Alignment:
Q |
13 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaa |
112 |
Q |
|
|
|||||||||||||||||||||||| | | || || |||| |||| |||||| |||| |||||||||||||||||| || | ||||| |||| |||| |
|
|
T |
35590166 |
aaatctggaaagaaagaaataacaggtttttcaatggcaaagaatgctcaattattcaggtggttgataaaattaagttgctgactttcaggtggctgaa |
35590265 |
T |
|
Q |
113 |
ggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttgctttct |
204 |
Q |
|
|
|||||| | ||| | ||||| ||||| ||||||||||||||| |||| || ||| | |||||| |||||| |||||||||| | ||||||| |
|
|
T |
35590266 |
ggcgaagtatccgtgtcttcccttcaactatcatggttggtggcttagccccttctctattttgggcataggctaatagttaatggctttct |
35590357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 30505752 - 30505842
Alignment:
Q |
107 |
gttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| || || || ||| |||||| ||||||||||||| |
|
|
T |
30505752 |
gttgaaggagaaattttcttcacttcccttcaattatcatggttggtggtttagtctgtttaccatgttgggcataggctaatagttattt |
30505842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 27009197 - 27009325
Alignment:
Q |
69 |
cacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattca |
168 |
Q |
|
|
|||||||||||||| |||||| | ||| ||| | ||| ||||||||||||||| |||| ||||| |||||||| |||||||||||| ||||||| || | |
|
|
T |
27009197 |
cacgtggttgataagattaagtctctcgcttttaggtgattgaaggcgaaatttacttctcttcccttcaattaccatggttggtggcttagtccgttta |
27009296 |
T |
|
Q |
169 |
caattttgagcatagactaatagttattt |
197 |
Q |
|
|
| || || ||||| ||||||||||||| |
|
|
T |
27009297 |
ccatactggacataggctaatagttattt |
27009325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 36176738 - 36176614
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||||||||| |||||| | |||| || |||||||| | || ||||||| |||| |||| |||||||||||||||||||| ||||||||||| || | |
|
|
T |
36176738 |
gtggttgataagattaagtcgctcacatttatgtggtt-atggtgaaatttgcttctcttctcttcaattatcatggttggtgttttagtccatttacca |
36176640 |
T |
|
Q |
172 |
ttttgagcatagactaatagttattt |
197 |
Q |
|
|
| ||| | |||| ||||||||||||| |
|
|
T |
36176639 |
tgttgggtataggctaatagttattt |
36176614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 45131197 - 45131129
Alignment:
Q |
98 |
tttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
||||||||||||||||| ||||| | |||| ||||| |||||||||||||| |||||| |||||||||| |
|
|
T |
45131197 |
tttcatgtggttgaaggggaaatatgcttctcttcccttcaattatcatgggtggtggcttagtccatt |
45131129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 37738188 - 37738057
Alignment:
Q |
67 |
ttcacgtggttgataaaattaagccactcattttcatgtggt-tgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccat |
165 |
Q |
|
|
|||| |||| |||||| |||||| | |||| |||||||||| ||||||||||||| || | ||||| || || | |||||| |||||| ||||||| | |
|
|
T |
37738188 |
ttcaggtggctgataagattaagtcgctcactttcatgtggcctgaaggcgaaattcactactcttccctttaactttcatggctggtggcttagtccgt |
37738089 |
T |
|
Q |
166 |
tcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||| |||||| |||||| ||||||||||||| |
|
|
T |
37738088 |
tcaccattttgggcataggctaatagttattt |
37738057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 9840763 - 9840893
Alignment:
Q |
67 |
ttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
|||| ||||||||||| ||||| | ||| ||| ||||| |||||||| |||||| || | ||||| ||||||||||||||||||||| ||| ||| || |
|
|
T |
9840763 |
ttcaagtggttgataagattaaatcgctcgcttttatgtgattgaaggcaaaatttgctactcttccattcaattatcatggttggtggcttaatccgtt |
9840862 |
T |
|
Q |
167 |
cacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||| || || ||||| ||||||||||||| |
|
|
T |
9840863 |
caccatgatgggcatatgctaatagttattt |
9840893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 33645901 - 33645808
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||||||||||| |||||| || | ||||| |||||||| |||||||||||| |||||| ||||| ||||||| ||||| || |||||||||| |
|
|
T |
33645901 |
gtggttgaaggaaaaatttgctactcttcctttcaattaccatggttggtgggttagtctgttcaccattttgaacataggctgatagttattt |
33645808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 31640236 - 31640372
Alignment:
Q |
67 |
ttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
|||| ||||| ||||| |||||| |||| ||| | ||||||||||||||||||| |||| ||||| ||||||| ||||| |||||| ||||||| || |
|
|
T |
31640236 |
ttcaagtggtagataagattaagtcacttgcttttacgtggttgaaggcgaaatttgcttctcttcccctcaattaccatggatggtggcttagtccgtt |
31640335 |
T |
|
Q |
167 |
cacaattttgagcatagactaatagttatttgctttc |
203 |
Q |
|
|
|||||| | |||||| ||| | ||||||| ||||| |
|
|
T |
31640336 |
tacaattataggcataggctagtggttatttcctttc |
31640372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 38409018 - 38409080
Alignment:
Q |
101 |
catgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtcc |
163 |
Q |
|
|
||||| |||||||| |||||| || ||||||| ||||||||||||||||||||||| ||||| |
|
|
T |
38409018 |
catgtagttgaaggtgaaattcgctacacttcccttcaattatcatggttggtggttcagtcc |
38409080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 37121046 - 37120943
Alignment:
Q |
12 |
aaaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttga |
111 |
Q |
|
|
|||||||| |||||||||||||||||| | || |||| || |||| || ||| ||||||||||||||||||| ||| | ||| || |||||||||| |
|
|
T |
37121046 |
aaaatctgaaaagaaagaaataacatgatattcaaagtcaaggaatgctccattattcacgtggttgataaaataaagtcgctctcatttatgtggttga |
37120947 |
T |
|
Q |
112 |
aggc |
115 |
Q |
|
|
|||| |
|
|
T |
37120946 |
aggc |
37120943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 27708288 - 27708158
Alignment:
Q |
67 |
ttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
|||| ||||||||||| |||||| | ||| ||| | |||||| |||||||||||| || | ||||| |||||| ||||||||||||| ||| || || |
|
|
T |
27708288 |
ttcaggtggttgataagattaagtcgctcgcttttacgtggttaaaggcgaaatttgctactcttcccttcaatcttcatggttggtggcttaatctgtt |
27708189 |
T |
|
Q |
167 |
cacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||| | || |||||| ||||||||||||| |
|
|
T |
27708188 |
caccgtactgggcataggctaatagttattt |
27708158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 44736078 - 44735982
Alignment:
Q |
66 |
gttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtc |
162 |
Q |
|
|
||||| ||||| || || |||||| | |||| ||| ||||||||||||||||| ||| | | ||||| ||||||| |||||||| |||| |||||| |
|
|
T |
44736078 |
gttcaggtggtcgacaagattaagtccctcacttttatgtggttgaaggcgaagtttaatactcttcccttcaattttcatggttagtggcttagtc |
44735982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 64443 - 64273
Alignment:
Q |
13 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaa |
112 |
Q |
|
|
|||| ||||||||||||||||||| | | ||||| |||| | |||||||| ||| ||||| |||||||||||| | ||| |||| |||||||||| |
|
|
T |
64443 |
aaatttggaaagaaagaaataacaggttatttaatggcaaggatagttcaattcctcaggtggtagataaaattaagtccctcgctttcttgtggttgaa |
64344 |
T |
|
Q |
113 |
ggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatag |
183 |
Q |
|
|
|| ||||| ||||| ||| | ||||||||||||| ||||||| ||||||| ||||| |||||| |||||| |
|
|
T |
64343 |
ggagaaatacccttctctttccttcaattatcatgcttggtggcttagtcctttcaccattttgggcatag |
64273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 40347982 - 40348118
Alignment:
Q |
73 |
tggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaat |
172 |
Q |
|
|
|||| |||||||||||| | || | |||||||||||||||||||| ||||| | ||||| ||||| ||||||||||| ||| ||| || ||||| || |
|
|
T |
40347982 |
tggtagataaaattaagtcgctgacgttcatgtggttgaaggcgaagtttccatttcttcctttcaactatcatggttgatggcttaaccctttcactat |
40348081 |
T |
|
Q |
173 |
tttgagcatagactaatagttatttgctttctttagt |
209 |
Q |
|
|
||| |||||||||||||||||| |||||||||||| |
|
|
T |
40348082 |
gttggacatagactaatagttattggctttctttagt |
40348118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 34237097 - 34237281
Alignment:
Q |
13 |
aaatctggaaagaaagaaataacatgctctttaaaggcactcaatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaa |
112 |
Q |
|
|
|||| |||||||||| |||||||||| | || | || || |||||||| | |||| |||||||| ||||||||| | ||| |||| ||||||||| |
|
|
T |
34237097 |
aaatttggaaagaaaaaaataacatgtttttcagagacaaagaatgttcagtaattcaggtggttgacaaaattaagtctctcgttttttggtggttgaa |
34237196 |
T |
|
Q |
113 |
ggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
||||||||||| | |||| ||||||||||||||||||||| ||||||| ||||| || ||| |||||| |||| | |||||| |
|
|
T |
34237197 |
ggcgaaatttcatattattcccttcaattatcatggttggtggcttagtcctttcaccatgttgggcataggctaaaaattattt |
34237281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 17116500 - 17116410
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtc |
162 |
Q |
|
|
||||||||||| |||||| ||||| || ||||||||||||||||||| | |||| ||||| |||| |||||||||||||||| |||||| |
|
|
T |
17116500 |
gtggttgataagattaagtcactcgcatttatgtggttgaaggcgaaatatgcttctcttcccttcagttatcatggttggtggcttagtc |
17116410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 27076557 - 27076707
Alignment:
Q |
55 |
aatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtg |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||| || || | ||||| ||||| ||||||||| ||||| || |||| ||||| |||||||||||||| |
|
|
T |
27076557 |
aatgttcaattattcaagtggttgataaaattgagtagctgactttcaggtggtagaaggcgaagtttccatctattcccttcaactatcatggttggtg |
27076656 |
T |
|
Q |
155 |
gtttagtc-cattcacaattttgagcatagactaatagttatttgctttct |
204 |
Q |
|
|
| |||| | ||||||| || | | ||||| |||||||||||| ||||||| |
|
|
T |
27076657 |
gcttagcctcattcactatatcggacataggctaatagttattggctttct |
27076707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 204
Target Start/End: Complemental strand, 27201744 - 27201594
Alignment:
Q |
55 |
aatgttcaattgttcacgtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtg |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||| || || | ||||| ||||| ||||||||| ||||| || |||| ||||| |||||||||||||| |
|
|
T |
27201744 |
aatgttcaattattcaagtggttgataaaattgagtagctgactttcaggtggtagaaggcgaagtttccatctattcccttcaactatcatggttggtg |
27201645 |
T |
|
Q |
155 |
gtttagtc-cattcacaattttgagcatagactaatagttatttgctttct |
204 |
Q |
|
|
| |||| | ||||||| || | | ||||| |||||||||||| ||||||| |
|
|
T |
27201644 |
gcttagcctcattcactatatcggacataggctaatagttattggctttct |
27201594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 26569739 - 26569792
Alignment:
Q |
102 |
atgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtgg |
155 |
Q |
|
|
|||||||||||||||||| || |||| ||||| |||||||||||||| |||||| |
|
|
T |
26569739 |
atgtggttgaaggcgaaacttgcttctcttcccttcaattatcatggatggtgg |
26569792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 49035466 - 49035377
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagtt |
193 |
Q |
|
|
|||||||||||||||| || |||| ||||| ||||||||||||||| |||| | | ||| ||||| ||| || |||||| ||||||||| |
|
|
T |
49035466 |
gtggttgaaggcgaaagttgcttctcttcccttcaattatcatggtaggtgttagaatccgttcaccattctgggcataggctaatagtt |
49035377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 12092705 - 12092772
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
|||||||||||||||||||||||| | || ||||| || || |||||||| | |||| |||||||||| |
|
|
T |
12092705 |
ttcatgtggttgaaggcgaaattttcctctcttcccttaaactatcatggatagtggcttagtccatt |
12092772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 4998103 - 4998075
Alignment:
Q |
8 |
atggaaaatctggaaagaaagaaataaca |
36 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
4998103 |
atggaaaatctggaaagaaagaaataaca |
4998075 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 42017819 - 42017907
Alignment:
Q |
102 |
atgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaata |
190 |
Q |
|
|
|||||||||||||||||| ||||| || | ||||| |||||||| |||||| ||||||| ||||| || ||| |||||| |||||| |
|
|
T |
42017819 |
atgtggttgaaggcgaaacttcctaagctctctttcaactatcatggatggtggcttagtccgttcactatgttgggcataggctaata |
42017907 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 39839933 - 39840059
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttatttg |
198 |
Q |
|
|
||||||||||||||| |||| ||||| || ||||| || || ||||||||||||||| ||||||| ||||| || ||| | |||| |||| |||| | | |
|
|
T |
39839933 |
ttcatgtggttgaagacgaagtttccatctcttccctttaactatcatggttggtggcttagtcccttcaccatgttgtgtataggttaattgttagtgg |
39840032 |
T |
|
Q |
199 |
ctttctttagttactgctttttgtttt |
225 |
Q |
|
|
|||||| |||||||| |||||||||| |
|
|
T |
39840033 |
ttttcttaagttactgttttttgtttt |
39840059 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 19315100 - 19314975
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||||||||| |||||| |||||| || ||||||||||||||||||||| ||| | |||| | |||||||||||||||||| |||| || || || | |
|
|
T |
19315100 |
gtggttgataagattaagtcactcacatttatgtggttgaaggcgaaatttgctttatttccctggaattatcatggttggtggcttagcccgtttacca |
19315001 |
T |
|
Q |
172 |
ttttgagcatagactaatagttattt |
197 |
Q |
|
|
| | |||||| ||||||||||||| |
|
|
T |
19315000 |
tgctaggcataggctaatagttattt |
19314975 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 26778789 - 26778725
Alignment:
Q |
99 |
ttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtcc |
163 |
Q |
|
|
|||||||||||||||| ||||||| ||| ||| | ||||||||||||||||||||||||||||| |
|
|
T |
26778789 |
ttcatgtggttgaaggtgaaatttttttctctttccttcaattatcatggttggtggtttagtcc |
26778725 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 12831610 - 12831489
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||||||||| |||||| | || ||| ||||||||||||| ||||||| | ||||| ||||||| ||||||||||||| ||||||| ||||| | |
|
|
T |
12831610 |
gtggttgataagattaagtcgatctcttttatgtggttgaaggtgaaatttaacacgcttcccttcaattttcatggttggtggcttagtccgttcacta |
12831511 |
T |
|
Q |
172 |
ttttgagcatagactaatagtt |
193 |
Q |
|
|
| ||| |||||| |||||||| |
|
|
T |
12831510 |
tgttgggcataggttaatagtt |
12831489 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 12863585 - 12863464
Alignment:
Q |
72 |
gtggttgataaaattaagccactcattttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaa |
171 |
Q |
|
|
||||||||||| |||||| | || ||| ||||||||||||| ||||||| | ||||| ||||||| ||||||||||||| ||||||| ||||| | |
|
|
T |
12863585 |
gtggttgataagattaagtccatctcttttatgtggttgaaggtgaaatttaacacgcttcccttcaattttcatggttggtggcttagtccgttcacta |
12863486 |
T |
|
Q |
172 |
ttttgagcatagactaatagtt |
193 |
Q |
|
|
| ||| |||||| |||||||| |
|
|
T |
12863485 |
tgttgggcataggttaatagtt |
12863464 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 18967885 - 18967949
Alignment:
Q |
102 |
atgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccatt |
166 |
Q |
|
|
||||||||||||||||||||| |||| ||||| || ||| ||||||| || ||| |||||||||| |
|
|
T |
18967885 |
atgtggttgaaggcgaaatttgcttctcttccatttaatgatcatggatgatggcttagtccatt |
18967949 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 29994652 - 29994703
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtgg |
155 |
Q |
|
|
||||||||||| ||| ||||||| ||||| ||||||||||||||||||||| |
|
|
T |
29994652 |
gtggttgaaggtgaagtttccttttcttcccttcaattatcatggttggtgg |
29994703 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 27482713 - 27482647
Alignment:
Q |
127 |
cacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagtt |
193 |
Q |
|
|
||||||| |||||||||||||| |||||| ||||||| ||||| || ||| |||||| |||| |||| |
|
|
T |
27482713 |
cacttcccttcaattatcatggctggtggcttagtccgttcaccatgttgggcataggctaagagtt |
27482647 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 16610602 - 16610691
Alignment:
Q |
104 |
gtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagtt |
193 |
Q |
|
|
|||||||||| |||| ||| ||| ||||| |||||||||||||| |||||| ||||||| || || ||||| |||| | ||||||||| |
|
|
T |
16610602 |
gtggttgaagacgaagtttgtttctcttcccttcaattatcatgggtggtggcttagtccgtttaccattttaggcattggctaatagtt |
16610691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 11305849 - 11305955
Alignment:
Q |
98 |
tttcatgtggttgaaggcgaaatttccttcacttccgttcaattatcatggttggtggtttagtccattcacaattttgagcatagactaatagttattt |
197 |
Q |
|
|
|||| ||||||||||||||||| ||||| || || ||||| || |||| ||||||| |||||||||||| || ||| |||||| ||||| ||||||| |
|
|
T |
11305849 |
tttcttgtggttgaaggcgaaaattcctaatctccccttcaactaccatgtttggtggcttagtccattcaatatgttgggcataggctaat-gttattt |
11305947 |
T |
|
Q |
198 |
gctttcttt |
206 |
Q |
|
|
|||||||| |
|
|
T |
11305948 |
-ctttcttt |
11305955 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 25942655 - 25942615
Alignment:
Q |
129 |
cttccgttcaattatcatggttggtggtttagtccattcac |
169 |
Q |
|
|
||||||||||||||| ||||||||||| ||||||| ||||| |
|
|
T |
25942655 |
cttccgttcaattattatggttggtggcttagtccgttcac |
25942615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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