View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2947_low_5 (Length: 313)
Name: NF2947_low_5
Description: NF2947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2947_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 47364729 - 47364421
Alignment:
| Q |
1 |
tctgtaaatggaagaacaatttgctgaacttgacatagaaataatagctacttataggcaaaagtagtcattgcaaagaccaaaaacatgcacgttatga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
47364729 |
tctgtaaatggaagaacaatttgctgaacttgacatagaaataatagctacttataggcaaaagtagtcgttgcaaagaccaaaaacatgcacgttatga |
47364630 |
T |
|
| Q |
101 |
gaactttactcttaacagtaattttaatagtgcacacagttcaaagaattaaaataatgatgcatgtgatgtagattgagtgagatccaacatccaaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
47364629 |
gaactttactcttaacagtaattttaatagtgcacacagttcaaagaattaaaataatgatgcatgtgatgtagattgagtgagaaccaacatccaaaat |
47364530 |
T |
|
| Q |
201 |
tgattacctatcctatccatcatatgaaatttccattaactctttaaaaaaggagaagattcatagttatgagacctaggtgctttgaaaaaagcatagt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47364529 |
tgattacctatcctatccatcatatgaaatttccataaactctttaaaaaaggagaagattcatagttatgagacctaggtgctttgaaaaaagcatagt |
47364430 |
T |
|
| Q |
301 |
gatgatgtc |
309 |
Q |
| |
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||||||||| |
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| T |
47364429 |
gatgatgtc |
47364421 |
T |
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