View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2994-Insertion-11 (Length: 224)
Name: NF2994-Insertion-11
Description: NF2994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2994-Insertion-11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 7734161 - 7734378
Alignment:
| Q |
8 |
attaatcctatttttctaatataccgtctaatttatactatatacatcactcaatatttgcatttatgataacagtgcatacactaataccctataaggn |
107 |
Q |
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| T |
7734161 |
attaatcctatttttctaatataccgtctaatttatactatatacatcactcaatatttgcatttatgataacggtgcatacactaataccctataaggt |
7734260 |
T |
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| Q |
108 |
nnnnnnn-ggtacaattataccctataaggttattatgctatttcttttgtttatagtttctccttataatttgtgtgaagtaaccaaatgttgacactc |
206 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
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| T |
7734261 |
ttttttttggtacaataataccctataaggttattatgctatttcttttgtttatagtttctccttataatttgtgtgaagtgaccaaatgttgatactc |
7734360 |
T |
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| Q |
207 |
aaaatgggacagagggag |
224 |
Q |
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|||||||||||||||||| |
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| T |
7734361 |
aaaatgggacagagggag |
7734378 |
T |
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