View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2994-Insertion-13 (Length: 261)
Name: NF2994-Insertion-13
Description: NF2994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2994-Insertion-13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 7 - 261
Target Start/End: Original strand, 515276 - 515533
Alignment:
| Q |
7 |
acaatggagtaaaaaa-taaagattttaaaataatgnnnnnnnnn--tggggatattaaattactataaatagtttccccctaccaaatccatcacaaac |
103 |
Q |
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|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
515276 |
acaatggagtaaaaaaataaagattttaaaataatgaagaaaaaaaatggggatattaaattactataaatagtttccccctaccaaatccatcacaaac |
515375 |
T |
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| Q |
104 |
ttgaaggtcaaggttccctgtgacttattctttgctaatatttcgattctaactctcctcattcccttaacttccataaccttactccaaaactcttctc |
203 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
515376 |
ttgaaggtcaaggttccttgtgacttattctttgctaatatttcgattctaactctcctcattcccttaacttccataaccttactccaaaactcttctc |
515475 |
T |
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| Q |
204 |
actcctcaccattttactatttttattatttaaatctctcttgattttctctcaacat |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
515476 |
actcctcaccattttactatttttattatttaaatctctcttgattttctctcaacat |
515533 |
T |
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