View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2994-Insertion-2 (Length: 629)
Name: NF2994-Insertion-2
Description: NF2994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2994-Insertion-2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 586; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 28 - 629
Target Start/End: Complemental strand, 33513248 - 33512647
Alignment:
| Q |
28 |
accctggtgaacctcgaggataatcctaaaagtaagtacctaaagaaagtgataatggactatacatcaacaaatgattgttgtttattctgagattgtt |
127 |
Q |
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|||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33513248 |
accctggtgagcctcgaggataagcctaaaagtaagtacctaaagaaagtgaaaatggactatacatcaacaaatgattgttgtttattctgagattgtt |
33513149 |
T |
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| Q |
128 |
gagatcttttttctctattcacaaaccattcagctgttcttcttgcaattggaaaccaaagcttcctccttctttcctctttaagattattttcggcaaa |
227 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
33513148 |
gagatcttttttctctattcacaaaccattcagctgttcttcttgcaattggaaaccaaagcttcctccttctttcctctttaagattattttcgacaaa |
33513049 |
T |
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| Q |
228 |
agaagaatcttcaaacacccttttcttcatgtcaaaatctttaaatctagaaacaccagtgatttcggacaccgatcttttctcaccatcataatcttga |
327 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33513048 |
agaagaatcttcaaacacccttttcttcatgtcaaaatctttaaatctagaaacaccagtgatttcggacaccgatcttttctcaccatcataatcttga |
33512949 |
T |
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| Q |
328 |
aattttgattccatgttattgaacctgttacttgatgaagcattaatcatttctgaattcaaaaacataagatcagaagaactaacattgctccatctat |
427 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33512948 |
aattttgattccatgttattgaacctgttacttgatgaagcattaatcatttctgaattcaaaaacataagatcagaagaactaacattgctccatctat |
33512849 |
T |
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| Q |
428 |
gcttaaacacaacatcagatatagtaatcttgtgattatgcttatgataagctttattgttagaatcacttttttctataagcaattcttcttcctttga |
527 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33512848 |
gcttaaacacaacatcagatatagtaatcttgtgattatgcttatgataagctttattgttagaatcacttttttctataagcaattcttcttcctttga |
33512749 |
T |
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| Q |
528 |
aataatacctttttcttcttccttaaatatagtagtagcttttccaattttcctaaagctgcttccaatactaaaccttgatgaaccatgttgattatta |
627 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33512748 |
aataatacctttttcttcttccttaaatatagtagtagcttttccaattttcctaaagctgcttccaatactaaaccttgatgaaccatgttgattatta |
33512649 |
T |
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| Q |
628 |
tc |
629 |
Q |
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|| |
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| T |
33512648 |
tc |
33512647 |
T |
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