View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2994-Insertion-4 (Length: 528)
Name: NF2994-Insertion-4
Description: NF2994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2994-Insertion-4 |
 | |
|
| [»] chr7 (18 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 517; Significance: 0; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 517; E-Value: 0
Query Start/End: Original strand, 8 - 528
Target Start/End: Original strand, 4863320 - 4863840
Alignment:
| Q |
8 |
tccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgta |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4863320 |
tccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgta |
4863419 |
T |
|
| Q |
108 |
aaatagcggcacaaatgggatggtaaagacgatgaaacttcgccttctttcttttttgtccatgagctttcatccatttcttcaacatgagattcaaatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4863420 |
aaatagcggcacaaatgggatggtaaagacgatgaaacttcgccttctttcttttttgtccatgagctttcatccatttcttcaacatgagattcaaatc |
4863519 |
T |
|
| Q |
208 |
ttcttcttcttctaacaaaaactatcactccaataacagatgctagcataagacatgaaactacaacaacaacgacgataactatggttgatttcttcga |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4863520 |
ttcttcttcttctaacaaaaactatcactccaataacagatgctagcataagacatgaaactacaacaacaacgacgataactatggttgatttcttcga |
4863619 |
T |
|
| Q |
308 |
ctgctcagttggtaaaccttgttctgtgggagataggataaagggttttggattcagtccaaagaaattattatttttatcgcttattttaaaaatctcg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4863620 |
ctgctcagttggtaaaccttgttctgtgggagatagaataaagggttttggattcagtccaaagaaattattatttttatcgcttattttaaaaatctcg |
4863719 |
T |
|
| Q |
408 |
attccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaaggttaactctttcaatttgagagcttcctt |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4863720 |
attccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaaggttaactctttcaatttgagagcttcctt |
4863819 |
T |
|
| Q |
508 |
cttcagagtttatagacacag |
528 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4863820 |
cttcagagtttatagacacag |
4863840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 18 - 528
Target Start/End: Complemental strand, 4697865 - 4697367
Alignment:
| Q |
18 |
taacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgtaaaatagcggc |
117 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||| | ||||||||||||||||| |
|
|
| T |
4697865 |
taacctttgaacacgttaccaaaccctccaactccaatgataaaaatatcttcgaagttgtttgtagcggctcttatctccgctattgtaaaatagcggc |
4697766 |
T |
|
| Q |
118 |
acaaatgggatggtaaagacgatgaaacttcgccttctttcttttttgtccatgagctttcatccatttcttcaacatgagattcaaatcttcttcttct |
217 |
Q |
| |
|
|||||||||||||||||| || ||| |||||||| || | ||||||| ||||| ||||| ||||| ||||||||||| ||||||||| || |
|
|
| T |
4697765 |
acaaatgggatggtaaagttgacgaa------ccttcttttcttgtcctccatgaactttcttccat---ttcaatatgagattcaagtcttcttctcct |
4697675 |
T |
|
| Q |
218 |
tctaacaaaaactatcactc---caataacagatgctagcataagacatgaaactacaacaacaacgacgataactatggttgatttcttcgactgctca |
314 |
Q |
| |
|
|||| || ||||||| | || ||| |||| ||||||||| ||||||||||||||||||||| | ||||||| | |||||||||||| || | | |
|
|
| T |
4697674 |
tctagcataaactatgattcccacaacaacaaatgctagcaagagacatgaaactacaacaaca---aggataactgttgttgatttcttctgttgttta |
4697578 |
T |
|
| Q |
315 |
gttggtaaaccttgttctgtgggagataggataaagggttttggattcagtccaaagaaattattatttttatcgcttattttaaaaatctcgattccat |
414 |
Q |
| |
|
||||||||| | | ||| ||| ||||| ||| |||||||||| |||||||| ||||| ||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
4697577 |
gttggtaaaacattttccttggaagatatattaa---gttttggatttgatccaaagagattatcatttttatcatttattttcaaaatctcgatgccat |
4697481 |
T |
|
| Q |
415 |
tcaacgtaacatcacggtattttgtaaacat-ggtctttggtaattgttgtaacttgagcgaaaggttaactctttcaatttgagagcttccttcttcag |
513 |
Q |
| |
|
|||| || ||||||| |||| |||| || || ||| |||| | |||||| ||||| ||||| |||| |||||||||||||||||||||||||| || |
|
|
| T |
4697480 |
tcaatgtgacatcaccgtatcttgtgaagatacgtc-ctggtgctcgttgtagcttgattgaaagattaagtctttcaatttgagagcttccttcttgag |
4697382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 8 - 505
Target Start/End: Complemental strand, 4784520 - 4784035
Alignment:
| Q |
8 |
tccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgta |
107 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||||||||||| ||| |||| || | ||||||| |
|
|
| T |
4784520 |
tccatcaatataacctttgtacacattgccgaaccctccaaccccgatgataaaaatatcttcgaagttgtttgtagctgcttttatttccgctattgta |
4784421 |
T |
|
| Q |
108 |
aaatagcggcacaaatgggatggtaaagacgatgaaacttcgccttctttcttttttgtccatgagctttcatccatttcttcaacatgagattcaaatc |
207 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| |||| ||||||| | ||||||| ||||| ||||| |||| |||||| | |||| |
|
|
| T |
4784420 |
aaatagcggcacaaatgggatggtaaacttgaggaa------ccttgtttctttgtcttccatgaactttcttccat---ttcagtatgagaattaaata |
4784330 |
T |
|
| Q |
208 |
ttcttcttcttctaacaaaaactatcactccaataacagatgctagcataagacatgaaactacaacaacaacgacgataactatggttgatttcttcga |
307 |
Q |
| |
|
|| | | | |||| |||||||| | | ||||| |||||||||||| || ||||||||||| |||| ||| | | ||| | | |||||||||||| | |
|
|
| T |
4784329 |
ttatattccgtctagcaaaaactgttattccaacaacagatgctagaatgagacatgaaacagcaaccacagcaaggatttttgttgttgatttcttcca |
4784230 |
T |
|
| Q |
308 |
ctgctcagttggtaaaccttgttctgtgggagataggataaagggttttggattcagtccaaagaaattattatttttatcgcttattttaaaaatctcg |
407 |
Q |
| |
|
|| | |||||||||| | ||||| ||||||| | | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
4784229 |
ttgttgagttggtaaaacctgttccttgggagaaaaagacatgggttttggattcactccaaaga---gattatttttatcacttattttcaaaatctca |
4784133 |
T |
|
| Q |
408 |
attccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaaggttaactctttcaatttgagagcttcc |
505 |
Q |
| |
|
|||||||||||||| |||||||| ||| ||| ||| | ||||||||| |||||| ||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
4784132 |
attccattcaacgtgacatcacgatataccgtaggcataggttttggtaatcgttgtagcttgatcgaaagattaactttttcaatttgagagcttcc |
4784035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 8 - 505
Target Start/End: Complemental strand, 4816949 - 4816464
Alignment:
| Q |
8 |
tccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgta |
107 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||||||||||| ||| |||| || | ||||||| |
|
|
| T |
4816949 |
tccatcaatataacctttgtacacattgccgaaccctccaaccccgatgataaaaatatcttcgaagttgtttgtagctgcttttatttccgctattgta |
4816850 |
T |
|
| Q |
108 |
aaatagcggcacaaatgggatggtaaagacgatgaaacttcgccttctttcttttttgtccatgagctttcatccatttcttcaacatgagattcaaatc |
207 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| |||| ||||||| | ||||||| |||| || || |||| |||||| | |||| |
|
|
| T |
4816849 |
aaatagcggcacaaatgggatggtaaacttgaggaa------ccttgtttctttgtcttccatgaaatttcttcaat---ttcagtatgagaattaaata |
4816759 |
T |
|
| Q |
208 |
ttcttcttcttctaacaaaaactatcactccaataacagatgctagcataagacatgaaactacaacaacaacgacgataactatggttgatttcttcga |
307 |
Q |
| |
|
|| | | | |||| |||||||| | | ||||| |||||||||||| || ||||||||||| |||| ||| | | ||| | | |||||||||||| | |
|
|
| T |
4816758 |
ttatattccgtctagcaaaaactgttattccaacaacagatgctagaatgagacatgaaacagcaaccacagcaaggatttttgttgttgatttcttcca |
4816659 |
T |
|
| Q |
308 |
ctgctcagttggtaaaccttgttctgtgggagataggataaagggttttggattcagtccaaagaaattattatttttatcgcttattttaaaaatctcg |
407 |
Q |
| |
|
|| | |||||||||| | ||||| ||||||| | | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
4816658 |
ttgttgagttggtaaaacctgttccttgggagaaaaagacatgggttttggattcactccaaaga---gattatttttatcacttattttcaaaatctca |
4816562 |
T |
|
| Q |
408 |
attccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaaggttaactctttcaatttgagagcttcc |
505 |
Q |
| |
|
|||||||||||||| |||||||| ||| | | ||| | ||||||||| | |||| ||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
4816561 |
attccattcaacgtgacatcacgatataccgaaggcataggttttggtaatcgatgtagcttgatcgaaagattaactttttcaatttgagagcttcc |
4816464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 4846696 - 4846579
Alignment:
| Q |
18 |
taacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgtaaaatagcggc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |||||||| || |||||||||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
4846696 |
taacctttgtacacgttgccgaaccctccagctccaatgataaaaatatcttcgaagttgtttgtagcttctcttatctccgctattgtaaaatagcggc |
4846597 |
T |
|
| Q |
118 |
acaaatgggatggtaaag |
135 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
4846596 |
acaaatgggacggtaaag |
4846579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 4661234 - 4661353
Alignment:
| Q |
7 |
atccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgt |
106 |
Q |
| |
|
||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||| || ||||| ||||||| ||||| |
|
|
| T |
4661234 |
atccatcaacacaacctttgtacacgttgccaaaccctccaactccaatgatgaaatcatcatcaaagttttttgtggctgctctgatctctgcaattgt |
4661333 |
T |
|
| Q |
107 |
aaaatagcggcacaaatggg |
126 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
4661334 |
aaagtagcggcacaaatggg |
4661353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 4712751 - 4712625
Alignment:
| Q |
8 |
tccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgta |
107 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||| || ||||| |||||||| || |||||||||||||| |||||||| || ||| ||| |
|
|
| T |
4712751 |
tccatcaatgtaacctttgtacacgttgccgaatcctccaaccccgatgataaaaatatcttcgaagttgtttgtagcggctcttatttccactatagta |
4712652 |
T |
|
| Q |
108 |
aaatagcggcacaaatgggatggtaaa |
134 |
Q |
| |
|
||| | || |||||||||||||||||| |
|
|
| T |
4712651 |
aaacatcgacacaaatgggatggtaaa |
4712625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 4666377 - 4666484
Alignment:
| Q |
19 |
aacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgtaaaatagcggca |
118 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||| || ||||| ||||||| |||||||| | ||||| |
|
|
| T |
4666377 |
aacctttgtacacgttgccaaaccctccaactccgatgatgaaatcatcgtcaaagttgtttgtggctgctctgatctctgcaattgtaaaggaccggca |
4666476 |
T |
|
| Q |
119 |
caaatggg |
126 |
Q |
| |
|
|||||||| |
|
|
| T |
4666477 |
caaatggg |
4666484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 4643134 - 4643253
Alignment:
| Q |
7 |
atccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgt |
106 |
Q |
| |
|
||||||||| | ||||||||||||||||||| |||||||||||||| ||||| ||| ||| || |||||||||||||| ||| | ||||||| ||||| |
|
|
| T |
4643134 |
atccatcaacacaacctttgtacacgttgccaaaccctccaactccgatgataaaagcatcatcgaagttgtttgtagctgctttgatctctgcgattgt |
4643233 |
T |
|
| Q |
107 |
aaaatagcggcacaaatggg |
126 |
Q |
| |
|
||| ||||||||| ||||| |
|
|
| T |
4643234 |
aaaggagcggcacagatggg |
4643253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 516
Target Start/End: Original strand, 4672440 - 4672582
Alignment:
| Q |
374 |
attattatttttatcgcttattttaaaaatctcgattccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagc |
473 |
Q |
| |
|
||||||||||||||| |||| ||| ||||||||||||||||| || || ||||||| || |||||| | | | |||| || | |||| | ||| | |
|
|
| T |
4672440 |
attattatttttatcacttactttgaaaatctcgattccatttaatgtgacatcactgtcttttgtgtagttcatatttgttagtggttgaagcttaata |
4672539 |
T |
|
| Q |
474 |
gaaaggttaactctttcaatttgagagcttccttcttcagagt |
516 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4672540 |
gaaagattaactctttcaatttgagagcttccttcttgagagt |
4672582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 4630351 - 4630456
Alignment:
| Q |
19 |
aacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgtaaaatagcggca |
118 |
Q |
| |
|
|||||||||||||||| || |||||||||| ||| ||||||||| || ||||||||||||||| || ||| | ||||| | |||||||| ||||| || |
|
|
| T |
4630351 |
aacctttgtacacgttcccaaaccctccaaatccgatgatgaaatcattgtcaaagttgtttgtggctgctttgatctccgcgattgtaaagtagcgaca |
4630450 |
T |
|
| Q |
119 |
caaatg |
124 |
Q |
| |
|
|||||| |
|
|
| T |
4630451 |
caaatg |
4630456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 4630791 - 4630833
Alignment:
| Q |
474 |
gaaaggttaactctttcaatttgagagcttccttcttcagagt |
516 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4630791 |
gaaagattaactctttcaatttgagagcttccttcttgagagt |
4630833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 4652962 - 4653067
Alignment:
| Q |
19 |
aacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgtaaaatagcggca |
118 |
Q |
| |
|
||||||||||||||||||| || |||||||| || |||||||||| ||| || ||||| ||||| || ||| | ||||||| ||||| || |||| || |
|
|
| T |
4652962 |
aacctttgtacacgttgccaaatcctccaacaccgatgatgaaaacatcatcgaagttatttgtggctgctttgatctctgcgattgtgaaggagcgaca |
4653061 |
T |
|
| Q |
119 |
caaatg |
124 |
Q |
| |
|
|||||| |
|
|
| T |
4653062 |
caaatg |
4653067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 4636287 - 4636415
Alignment:
| Q |
7 |
atccatcaatataacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgt |
106 |
Q |
| |
|
|||||||||| ||||||||||||| || || ||||| ||||| || || ||| ||| || ||||| ||||| || ||||| ||||||| ||||| |
|
|
| T |
4636287 |
atccatcaatgaaacctttgtacacattcccaaaccccccaacaccgataatgttttcatcatcgaagttttttgtggctgctctgatctctgcgattgt |
4636386 |
T |
|
| Q |
107 |
aaaatagcggcacaaatgggatggtaaag |
135 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |
|
|
| T |
4636387 |
aaagtagcggcacaaataggatggtaaag |
4636415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 516
Target Start/End: Original strand, 4653390 - 4653426
Alignment:
| Q |
480 |
ttaactctttcaatttgagagcttccttcttcagagt |
516 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4653390 |
ttaactctttcaatttgagtgcttccttcttcagagt |
4653426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 505
Target Start/End: Complemental strand, 4712403 - 4712275
Alignment:
| Q |
377 |
attatttttatcgcttattttaaaaatctcgattccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaa |
476 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||||||| | ||||||||||| ||||| | || | | |||| | |||| | ||| | ||| |
|
|
| T |
4712403 |
attatttttatcacttattttgaaaatctcaattccattcattatgacatcacggtaatttgtgtagatactttctggttctcgttgaagcttaattgaa |
4712304 |
T |
|
| Q |
477 |
aggttaactctttcaatttgagagcttcc |
505 |
Q |
| |
|
||||||||||||||||||| ||||||||| |
|
|
| T |
4712303 |
aggttaactctttcaatttcagagcttcc |
4712275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 500
Target Start/End: Original strand, 4636631 - 4636753
Alignment:
| Q |
378 |
ttatttttatcgcttattttaaaaatctcgattccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaa |
477 |
Q |
| |
|
|||| |||||| || ||||| ||||||||||||||||| | |||||||||| ||| |||| ||||| | ||||||| |||| | ||||| |||| |
|
|
| T |
4636631 |
ttatatttatcactaattttgaaaatctcgattccattaagaataacatcacgatatactgtaggcatgggttgtggtaatcgttgaagcttgattgaaa |
4636730 |
T |
|
| Q |
478 |
ggttaactctttcaatttgagag |
500 |
Q |
| |
|
| | ||||||||||||||||||| |
|
|
| T |
4636731 |
gataaactctttcaatttgagag |
4636753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 4643454 - 4643494
Alignment:
| Q |
378 |
ttatttttatcgcttattttaaaaatctcgattccattcaa |
418 |
Q |
| |
|
|||||||| || |||||||| |||||||||||||||||||| |
|
|
| T |
4643454 |
ttatttttgtcacttatttttaaaatctcgattccattcaa |
4643494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 18926413 - 18926296
Alignment:
| Q |
19 |
aacctttgtacacgttgccgaaccctccaactccaatgatgaaaatatcgtcaaagttgtttgtagcagctcttatctctgttattgtaaaatagcggca |
118 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| ||||| ||| ||| |||||||| ||||| || ||| ||||||||| |||||||| |||||||| |
|
|
| T |
18926413 |
aacctttatacacgttgccaaaccctccaactccgatgattaaatcatcatcaaagttatttgtggctgcttttatctctgcaattgtaaagtagcggca |
18926314 |
T |
|
| Q |
119 |
caaatgggatggtaaaga |
136 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
18926313 |
caaatggggcggtaaaga |
18926296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 18926069 - 18926009
Alignment:
| Q |
378 |
ttatttttatcgcttattttaaaaatctcgattccattcaacgtaacatcacggtattttg |
438 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| |||||||| || |||| ||||||||||| |
|
|
| T |
18926069 |
ttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacggtattttg |
18926009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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