View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2994-Insertion-7 (Length: 311)
Name: NF2994-Insertion-7
Description: NF2994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2994-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 311
Target Start/End: Complemental strand, 4814157 - 4813872
Alignment:
| Q |
26 |
catttcaattctttcttcaccatatgtatcatcatctactactatttagctcgaccatcactatgaaccacattcagccaaaagtgatttatctccataa |
125 |
Q |
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| T |
4814157 |
catttcaattctttcttcaccatatttatcatcatctactactatttagctcgaccatcactatgaaccacattcagccaaaagtgatttatctccataa |
4814058 |
T |
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| Q |
126 |
taaagtccctaagataaattttaatttaatgtcattcataatgtttagtctttgaagccaaaggaacccaatgcacaagttgccttctactgatctcgct |
225 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4814057 |
taaactccctaagataaattttaatttaatgtcattcataatgtttagtctttgaagccaaaggaacccaatgcacaagttgccttctactgatctcgct |
4813958 |
T |
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| Q |
226 |
gaattttttaaattccctccatacaaaacttaaggattgtaattgtcattataggataatgagagatgtttacccttcgaccacaa |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
4813957 |
gaattttttaaattccctccatacaaaacttaaggattgtaattgtcattataggataatgagagatgtttacccttccaccacaa |
4813872 |
T |
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