View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2994_high_1 (Length: 1223)
Name: NF2994_high_1
Description: NF2994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF2994_high_1 |
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[»] scaffold0989 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 746; Significance: 0; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 746; E-Value: 0
Query Start/End: Original strand, 20 - 907
Target Start/End: Complemental strand, 38413048 - 38412159
Alignment:
Q |
20 |
gtctctgcctttgaggctgttgttcttgttctcaccctctgcttcttttacctttgttgtggttgcagcttctgattttcacctttctctctctcatata |
119 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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T |
38413048 |
gtctctgcctttgaggctgttgttcttgttctcaccctctgcttcttttacctttgttgtggttgcagcttctgattttcacctttctctctctctctca |
38412949 |
T |
|
Q |
120 |
ta-ataatgtaagggtaatgtactatttttctaacttcctactcaatgcaatcaatgctttttagcttttgtaatttcaattatatgttcattcaaaact |
218 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38412948 |
tatataatgtaagggtaatgtactatttttctaacttcctactcaatgcaatcaatgctttttagcttttgtaatttcaattatatgttcattcaaaact |
38412849 |
T |
|
Q |
219 |
gctttagtatttctagtttcttatcctaagtttggattaatcacatatatttaagggtgcaaaactaaagaaaattagttgatcatcaaattttttgaat |
318 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38412848 |
gctttagtatttctagtttcttatcctaagtttgtattaatcacatatatttaagggtgcaaaactaaagaaaattagttgatcatcaaattttttgaat |
38412749 |
T |
|
Q |
319 |
caa-gaggatgagttttggatgaattat-----taccttctctcactcccaacataattcaaagtaattttattttattagataagtgccctacctaatg |
412 |
Q |
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||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38412748 |
caaagaggatgagttttggatgaattatattattaccttctctcactcccaacataattcaaagtaattttattttattagataagtgccctacctaatg |
38412649 |
T |
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Q |
413 |
gccatatggtggaaacacgatataaaatgtcttcatacaaaactactagactgtaacaacgaggacaattcttgatatataacaaacttgaaaatgatat |
512 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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T |
38412648 |
gccatatggtggaaacacgatataaaatgtcttcatacaaaactactagactgtaacaacgaggacaattcttgatatatgacaaacttgaaaatgatat |
38412549 |
T |
|
Q |
513 |
tttccattgaaagagtttaacatttgttatgtgaagcaacaaaatatccattatgtgatataaaacacatgacaattatcatattaaccaaccaatatcc |
612 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38412548 |
tttccattgaaagagtttaacatttgttatgtgaagcaacaaaatatccattatgtgatataaaacacatgacaattatcatattaaccaaccaatatct |
38412449 |
T |
|
Q |
613 |
acaatcataccaaccattgacattagtagatcttactcaatacaacattgtcccaagtgagtgttcattgcaaacatttttgtttgaaatgattaattct |
712 |
Q |
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|||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || |
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T |
38412448 |
acaatcattccaaccattgacattagtagatcttactcaagacaacattgt-ccaagtgagtgttcattgcaaacatttttgtttgaaa-gattaatgct |
38412351 |
T |
|
Q |
713 |
tcaagattnnnnnnnnnnnnnnnnttattgaaagatattttttaatggcgatatccaccgaaagattaatgctgatttgtgaatcacatttagtttgctc |
812 |
Q |
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|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38412350 |
tcaagatt---aaaaaaaataaaattattgaaagatcttttttaatggcgatatccaccgaaagattaatgctgatttgtgaatcacatttagtttgctc |
38412254 |
T |
|
Q |
813 |
tactatatcgttgatactagtcttagaggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaagtataggtagccgacgttaccg |
907 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38412253 |
tactatatcgttgatactagtcttagaggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaagtataggtagccgacgttaccg |
38412159 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 914 - 1213
Target Start/End: Complemental strand, 38412043 - 38411744
Alignment:
Q |
914 |
tatcttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatct |
1013 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
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T |
38412043 |
tatcttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacataatgttatttccttatctagtttagaactccaaatct |
38411944 |
T |
|
Q |
1014 |
atctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataatacaatata |
1113 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
38411943 |
atctctaggttaagttatttacattcctatcattgtttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataatacaatatc |
38411844 |
T |
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Q |
1114 |
tgtaacggccgaaatggtgaaatcatatacacgacctggaccttgaccgcgaccgttgtttaaaacctttcggctgctaaaaatgtttttgtgatgatgt |
1213 |
Q |
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|||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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T |
38411843 |
tgtaacagccgaaatggtgaaatcatatacatgacctggaccttgaacgcgaccgttgtttaaaacctttcggctgctaaaaatatttttgtgatgatgt |
38411744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 918 - 1100
Target Start/End: Complemental strand, 55606416 - 55606235
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
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||||||||| | |||||||||||| ||||||||| |||||| ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||| |
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T |
55606416 |
ttttcaattgatatagatgaaaattatatttttagtacatatttgatcataaattacataa-gttatttccttatatagtttagaactccaaatctttct |
55606318 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatct |
1100 |
Q |
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|||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |
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T |
55606317 |
ctagtttaagttatttaagttactatcattatttaagagttgtgcaatgttgtgattaattcacaatgcgacaaccgtaatct |
55606235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 185 - 595
Target Start/End: Complemental strand, 38422804 - 38422420
Alignment:
Q |
185 |
ttttgtaatttcaattatatg---ttcattcaaaactgctttagtattt----ctagtttcttatcctaagtttggattaatcacatatatttaagggtg |
277 |
Q |
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|||||||||||||||||| | |||||||||||| | |||||||||| |||||||||||||||||||||| || ||||||||||||| |
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T |
38422804 |
ttttgtaatttcaattatgttcatttcattcaaaaccgatttagtatttatttctagtttcttatcctaagtttgtat---------atatttaagggtg |
38422714 |
T |
|
Q |
278 |
caaaactaaagaaaattagttgatcatcaaattttttgaatcaa-gaggatgagttttggatgaattattaccttctctcactcccaacataattcaaag |
376 |
Q |
|
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||||||||||||||||| ||||||||| ||| | ||||||||| |||||| ||||||||||||||||| |||| | | |||||||||||||||| |
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T |
38422713 |
caaaactaaagaaaattggttgatcatgaaaagtcttgaatcaaagaggataggttttggatgaattattcccttgccctag--ccaacataattcaaag |
38422616 |
T |
|
Q |
377 |
taattttattttattagataagtgccctacctaatggccatatggtggaaacacgatataaaatgtcttcatacaaaactactagactgtaacaacgagg |
476 |
Q |
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|||||| | |||||||||||||| |||| ||||||| | ||||||| |||||||||||| ||||||| |||| ||| |
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T |
38422615 |
taattt-acattattagataagtggccta----atggccacacggtggaagcacgatataaaacgtcttca---------------------caacaagg |
38422542 |
T |
|
Q |
477 |
acaattcttgatatata--acaaacttgaaaatgatattttccattgaaagagttt-aacatttgttatgtgaagcaacaaaatatccattatgtgatat |
573 |
Q |
|
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||||||||||||||||| |||||||||||||||||| ||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||| | || |
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T |
38422541 |
acaattcttgatatatataacaaacttgaaaatgatactttaccttgaaagagttttaacatttgtcatgtgaagcaacaaaatatccattatgtcaaat |
38422442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 918 - 1096
Target Start/End: Original strand, 28146982 - 28147159
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
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||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||| |||||||||| ||||||| | ||||||| || |
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T |
28146982 |
ttttcaattgagatagatgaaaatcatatttttagtacatatttgatcataaattacata-agttatctccttatctaatttagaattccaaatctttcc |
28147080 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgca |
1096 |
Q |
|
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|||| |||||||||||| || || ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |
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|
T |
28147081 |
ctagtttaagttatttaagttgataatattatttaagagttgtgcaatgttgtgattaattcacaccgcgacaaccgca |
28147159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 918 - 1099
Target Start/End: Original strand, 25967999 - 25968179
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| | |||||||| |||||||||||| |||||| ||||| |||||||||||| ||||| | ||||||||||||||||| ||| |||| ||| |
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|
T |
25967999 |
ttttcaattgatatagatgataatcatatttttggtacatatttgataataaattacataa-gttatcttcttatctagtttagaacgtcagatctttct |
25968097 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
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|||| ||||||||| || | |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
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T |
25968098 |
ctagtttaagttatgtaagtgactatcattatttaagagttgtgcaatgttgtgattaattcacaccgcgacaaccgcaatc |
25968179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 38422935 - 38422858
Alignment:
Q |
20 |
gtctctgcctttgaggctgttgttcttgttctcaccctctgcttcttttacctttgttgtggttgcagcttctgattt |
97 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
38422935 |
gtctctgcctttgaggctgttgttcttgttctcaccctctgcttcttttacctttgttgtggttgcagcttctgattt |
38422858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 918 - 1091
Target Start/End: Complemental strand, 13198250 - 13198078
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
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||||||||| ||||| |||||||||||||| ||| | |||| ||||| |||||||||||| ||||| |||||||||| ||||||||| ||||||| | | |
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|
T |
13198250 |
ttttcaattgagatacatgaaaatcatattcttagtgcatatttgatcataaattacataa-gttatctccttatctaatttagaactccaaatctttgt |
13198152 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaa |
1091 |
Q |
|
|
|||| ||||||||| | || | |||||| ||||| |||||||||||||||||||||||||||| |||||||| |
|
|
T |
13198151 |
ctagtttaagttatcaaagttacgatcattgtttaagagttgtgcaatgttgtgattaattcacaccgcgacaa |
13198078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 918 - 1000
Target Start/End: Original strand, 11440588 - 11440670
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagttta |
1000 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||| | ||||| ||||||| |
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|
T |
11440588 |
ttttcaattaagatagatgaaaatcatatttttagtacatatttgatcataaattacataatgttatcttcttatatagttta |
11440670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1023 - 1149
Target Start/End: Original strand, 11440668 - 11440797
Alignment:
Q |
1023 |
ttaagttatttacattcctatcattatt---taaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataatacaatatatgtaac |
1119 |
Q |
|
|
|||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||| ||||| |||| ||| || ||||| |
|
|
T |
11440668 |
ttaagttatttacattactatcattattatttaagagttgaacaatgttgtgattaattcacaccgcgacaacaacaatccataacgcaacattcgtaac |
11440767 |
T |
|
Q |
1120 |
ggccgaaatggtgaaatcatatacacgacc |
1149 |
Q |
|
|
|||||||| |||||||||||| ||||||| |
|
|
T |
11440768 |
agccgaaatcgtgaaatcatatccacgacc |
11440797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 739 - 811
Target Start/End: Complemental strand, 38407613 - 38407541
Alignment:
Q |
739 |
attgaaagatattttttaatggcgatatccaccgaaagattaatgctgatttgtgaatcacatttagtttgct |
811 |
Q |
|
|
|||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||| |
|
|
T |
38407613 |
attgaaagattttttttaatggcaatatccacagaaagattaatgctaatttgtgaatcacattgggtttgct |
38407541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 839 - 909
Target Start/End: Original strand, 25967801 - 25967872
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||| ||||||| |||||||||| ||||| |||||||||| ||||||||||| |||||||||||| |
|
|
T |
25967801 |
aggttttaaaatatggtccgttaccgagaataaggctgcgacaaaaaggtataggtagcggacgttaccgtt |
25967872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 38407791 - 38407731
Alignment:
Q |
168 |
aatcaatgctttttagcttttgtaatttcaattatatgttcattcaaaactgctttagtattt |
230 |
Q |
|
|
|||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
T |
38407791 |
aatcaaagctttttagcttttgtaatttcaat--tatgttcattcaaaaccactttagtattt |
38407731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 609 - 701
Target Start/End: Complemental strand, 38422357 - 38422270
Alignment:
Q |
609 |
atccacaatcataccaaccattgacattagtagatcttactcaatacaacattgtcccaagtgagtgttcattgcaaacatttttgtttgaaa |
701 |
Q |
|
|
|||||||||||||||||||||| ||||| |||||||||| || ||||||||||| ||||||| |||| ||| |||||||| ||||||||| |
|
|
T |
38422357 |
atccacaatcataccaaccatt---attagcagatcttactgaagacaacattgtctcaagtga--gttccttgtaaacatttctgtttgaaa |
38422270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 662 - 720
Target Start/End: Complemental strand, 38407688 - 38407632
Alignment:
Q |
662 |
gtcccaagtgagtgttcattgcaaacatttttgtttgaaatgattaattcttcaagatt |
720 |
Q |
|
|
||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||| |
|
|
T |
38407688 |
gtcccaagtgagt--tcattgtaaacatttttgtttgaaaagattaatgcttcaagatt |
38407632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 839 - 909
Target Start/End: Original strand, 28146787 - 28146858
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||||| |||| |||| ||||||||||| || ||||||| ||||||||||| ||| |||||||| |
|
|
T |
28146787 |
aggttttaaaaaacggtctgttacggagaaaaaggccgcaacaaaaaggtataggtagcggacattaccgtt |
28146858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1057 - 1100
Target Start/End: Original strand, 29866160 - 29866203
Alignment:
Q |
1057 |
ttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatct |
1100 |
Q |
|
|
|||||||||||||||||||||||||| | |||||||| |||||| |
|
|
T |
29866160 |
ttgtgcaatgttgtgattaattcacaccacgacaaccacaatct |
29866203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 953 - 1053
Target Start/End: Complemental strand, 46308487 - 46308387
Alignment:
Q |
953 |
tacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatctct-aggttaagttatttacattcctatcattattt |
1051 |
Q |
|
|
|||||| ||||| |||||||||||| ||||| |||||| |||||||||||| |||||| ||||| | |||||||||||| || |||||||||||| |
|
|
T |
46308487 |
tacatatttgatcataaattacataa-gttatctccttagttagtttagaactctaaatctctctctcaatttaagttatttaagttactatcattattt |
46308389 |
T |
|
Q |
1052 |
aa |
1053 |
Q |
|
|
|| |
|
|
T |
46308388 |
aa |
46308387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 107; Significance: 5e-53; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 913 - 1099
Target Start/End: Complemental strand, 25636079 - 25635893
Alignment:
Q |
913 |
gtatcttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatc |
1012 |
Q |
|
|
|||| ||||||||| | ||||||||||||||||| |||| |||||| || || |||||||||||| |||||| ||||| |||||||||||||| |||||| |
|
|
T |
25636079 |
gtattttttcaattgaaatagatgaaaatcatatctttagtacatatttaatcataaattacataatgttatctccttgtctagtttagaactccaaatc |
25635980 |
T |
|
Q |
1013 |
tatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
||||| ||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||| |
|
|
T |
25635979 |
tatctttagtttaagttatttacattattatcattatttaagaggtgtgcaatgttgtgattaattcacaccgcaacaaccgcaatc |
25635893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 919 - 1104
Target Start/End: Complemental strand, 39653626 - 39653441
Alignment:
Q |
919 |
tttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatctc |
1018 |
Q |
|
|
|||||||| | ||||||||| |||||||||||| |||||| ||||| |||||||||||| |||||| || ||||||||||||||||| ||| | ||| || |
|
|
T |
39653626 |
tttcaattgaaatagatgaacatcatatttttagtacatatttgatcataaattacataatgttatctctttatctagtttagaactccaactttatatc |
39653527 |
T |
|
Q |
1019 |
taggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataa |
1104 |
Q |
|
|
||| ||||||||||||| || |||||||||||||| ||||||| ||| |||||||||||||||| ||| |||||| ||||| |||| |
|
|
T |
39653526 |
tagtttaagttatttacgttgctatcattatttaagagttgtggaatattgtgattaattcacaccgcaacaaccacaatccataa |
39653441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 918 - 1103
Target Start/End: Complemental strand, 47363874 - 47363689
Alignment:
Q |
918 |
ttttcaattaagat-agatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatc |
1016 |
Q |
|
|
||||||||| |||| ||||||||| |||||||||| |||||| ||||| ||| |||||||| ||||| |||||||||||||||||||||||||||| || |
|
|
T |
47363874 |
ttttcaattgagattagatgaaaagcatatttttagtacatatttgatcatagattacataa-gttatctccttatctagtttagaacttcaaatctttc |
47363776 |
T |
|
Q |
1017 |
tctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctata |
1103 |
Q |
|
|
||||| |||||||||||| || ||||||||||||| | |||||||||||| ||||||||||||| | |||||||||||| |||| |
|
|
T |
47363775 |
tctagtttaagttatttaagttattatcattatttaagacttgtgcaatgttttgattaattcacaccaagacaaccgcaatttata |
47363689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 918 - 1026
Target Start/End: Complemental strand, 10493579 - 10493472
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| |||| ||||||| ||||||||||| | |||| ||||| |||||||||||| |||||| ||||||| ||||||||| || |||||| |||| |
|
|
T |
10493579 |
ttttcaattgagatggatgaaa-tcatatttttaatgcatatttgatcataaattacataatgttatctccttatatagtttagacctccaaatccatct |
10493481 |
T |
|
Q |
1018 |
ctaggttaa |
1026 |
Q |
|
|
|||| |||| |
|
|
T |
10493480 |
ctagtttaa |
10493472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1023 - 1082
Target Start/End: Complemental strand, 10493435 - 10493376
Alignment:
Q |
1023 |
ttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcaca |
1082 |
Q |
|
|
||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
10493435 |
ttaagttatttacgttactatcattatttaagagttgtgcaatgttgtgattaattcaca |
10493376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1104
Target Start/End: Original strand, 33049115 - 33049311
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttcctt----------atctagtttagaacttc |
1007 |
Q |
|
|
||||||||| |||| ||||||||||| ||||||| |||||| |||| |||||||||| | ||||| ||||| |||||||||| |||||| |
|
|
T |
33049115 |
ttttcaattgagatggatgaaaatcacatttttagtacatatttgaacataaattacagaaggttatctcctttatgctctttatctagttta-aacttc |
33049213 |
T |
|
Q |
1008 |
aaatctatctctaggttaagttatttacattcctat-cattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataa |
1104 |
Q |
|
|
||||||||||||| | |||||||||| || ||| |||||||||| |||||||||||||| ||||||||||||| | |||| ||| ||||| |||| |
|
|
T |
33049214 |
aaatctatctctatttcaagttatttaagttattatacattatttaagagttgtgcaatgttttgattaattcacacctcgacgaccacaatccataa |
33049311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1014 - 1099
Target Start/End: Complemental strand, 7493138 - 7493053
Alignment:
Q |
1014 |
atctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|||||||| |||| |||||||| || |||||||||||||| ||||||| |||||||||||||||||||| || || |||| ||||| |
|
|
T |
7493138 |
atctctagtttaaattatttacgttactatcattatttaagagttgtgtaatgttgtgattaattcacaccgtgataaccacaatc |
7493053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 842 - 909
Target Start/End: Complemental strand, 47364030 - 47363963
Alignment:
Q |
842 |
ttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaagtataggtagccgacgttaccgtt |
909 |
Q |
|
|
|||||||||| ||||| |||||||||||||||| | |||||||||||||||||| |||||||||||| |
|
|
T |
47364030 |
ttttaaaaaacggtccgttaccgagaaaaaggccaccacaaaaagtataggtagcggacgttaccgtt |
47363963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 946 - 1011
Target Start/End: Original strand, 45435419 - 45435484
Alignment:
Q |
946 |
tttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaat |
1011 |
Q |
|
|
|||||| |||||| ||||| |||||||||||| |||||| || ||||||||||||||||||||||| |
|
|
T |
45435419 |
tttttagtacatatttgatcataaattacataatgttatctctttatctagtttagaacttcaaat |
45435484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 989 - 1082
Target Start/End: Original strand, 31742958 - 31743052
Alignment:
Q |
989 |
ttatctagtttagaacttcaaatctatctctaggttaagttatttacattcctat-cattatttaaaagttgtgcaatgttgtgattaattcaca |
1082 |
Q |
|
|
||||||| || | ||||||||||||||||||| |||||||||||| || ||| |||||||||| | ||||||||||||||||||||||||| |
|
|
T |
31742958 |
ttatctacttcaaaacttcaaatctatctctaatttaagttatttaagttattatacattatttaagaactgtgcaatgttgtgattaattcaca |
31743052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1000 - 1098
Target Start/End: Original strand, 45435503 - 45435603
Alignment:
Q |
1000 |
agaacttcaaatctatctctaggttaagttat--ttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaa |
1097 |
Q |
|
|
|||||||||||| |||||| | ||||||||| || |||| |||| ||||||||| ||||||||||| |||| ||||||||||| ||||| ||| |||| |
|
|
T |
45435503 |
agaacttcaaatttatctccaatttaagttatatttccattactattattatttaagagttgtgcaatattgttattaattcacaccgcgataactgcaa |
45435602 |
T |
|
Q |
1098 |
t |
1098 |
Q |
|
|
| |
|
|
T |
45435603 |
t |
45435603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 99; Significance: 3e-48; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 918 - 1100
Target Start/End: Complemental strand, 37794821 - 37794640
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| ||||||| |||||||||||||||| |||||| ||||| |||||||||||| ||||| |||||||||||||||||||| ||||||| ||| |
|
|
T |
37794821 |
ttttcaattgagatagaagaaaatcatatttttagtacatatttgatcataaattacataa-gttatctccttatctagtttagaactccaaatctttct |
37794723 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatct |
1100 |
Q |
|
|
|| | |||||||| || || |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
T |
37794722 |
ctggtctaagttatctaagttactatcattatttaagagttgtgcaatgttgtgattaattcacaccacgacaaccgcaatct |
37794640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 918 - 1099
Target Start/End: Complemental strand, 17989157 - 17988977
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| |||| ||||||||||||||||||| |||||| ||||| |||||||| ||| | |||| |||||||||||||||||||| ||||||| | | |
|
|
T |
17989157 |
ttttcaattgagatcgatgaaaatcatatttttagtacatatttgatcataaattatataat-ttatctccttatctagtttagaactccaaatcttttt |
17989059 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|||| |||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||| | |||||||||||||| |
|
|
T |
17989058 |
ctagtttaagttatttaagttactatcattatttaagagttgtgcaatattgtgattaattcacacctcgacaaccgcaatc |
17988977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 981 - 1178
Target Start/End: Original strand, 5430210 - 5430407
Alignment:
Q |
981 |
ttatttccttatctagtttagaacttcaaatctatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattca |
1080 |
Q |
|
|
|||| |||||||||| ||||||| | ||| ||||||||||| |||||||||||| || |||||||||||||| ||||||||||| |||||||||||||| |
|
|
T |
5430210 |
ttatctccttatctactttagaaatccaactctatctctagtttaagttatttatgttactatcattatttaagagttgtgcaatattgtgattaattca |
5430309 |
T |
|
Q |
1081 |
cagcgcgacaaccgcaatctataatacaatatatgtaacggccgaaatggtgaaatcatatacacgacctggaccttgaccgcgaccgttgtttaaaa |
1178 |
Q |
|
|
|| |||||||||| |||||| |||| ||| || ||||| ||||||| || ||||||||||| ||||| ||| ||| ||||||| || ||||||| |
|
|
T |
5430310 |
caccgcgacaaccacaatctgtaatgcaacatccgtaacaaccgaaatcgtaaaatcatatacgcgaccgcgacattgttcgcgaccattatttaaaa |
5430407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1008 - 1098
Target Start/End: Original strand, 19263821 - 19263911
Alignment:
Q |
1008 |
aaatctatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaat |
1098 |
Q |
|
|
|||||||||||||| ||||||||||| || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
19263821 |
aaatctatctctagtataagttatttatgttactatcattatttaagaattgtgcaatgttgtgattaattcacagcgcaacaaccgcaat |
19263911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1024 - 1096
Target Start/End: Complemental strand, 35016388 - 35016316
Alignment:
Q |
1024 |
taagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgca |
1096 |
Q |
|
|
||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |
|
|
T |
35016388 |
taagttatttaagttactatcattatttaagagttgtgtaatgttgtgattaattcacaccgcgacaaccgca |
35016316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 928 - 1013
Target Start/End: Complemental strand, 35016541 - 35016457
Alignment:
Q |
928 |
agatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatct |
1013 |
Q |
|
|
||||||||||||||||||||||| |||||| ||||| |||||||| ||| ||||| |||||||||||||||||| | ||||||| |
|
|
T |
35016541 |
agatagatgaaaatcatatttttgatacatatttgatcataaattatata-agttatctccttatctagtttagaattccaaatct |
35016457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 919 - 977
Target Start/End: Original strand, 5428641 - 5428699
Alignment:
Q |
919 |
tttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacata |
977 |
Q |
|
|
|||||||| |||||||||||||||||||| ||| |||||| ||||| |||||||||||| |
|
|
T |
5428641 |
tttcaattgagatagatgaaaatcatattattagtacataattgatcataaattacata |
5428699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 919 - 971
Target Start/End: Original strand, 19263772 - 19263824
Alignment:
Q |
919 |
tttcaattaagatagatgaaaatcatatttttactacatacttgattataaat |
971 |
Q |
|
|
|||||||| |||||||||||||||||||||||| |||||| ||||| |||||| |
|
|
T |
19263772 |
tttcaattgagatagatgaaaatcatatttttaatacatatttgatcataaat |
19263824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1058 - 1100
Target Start/End: Original strand, 20929880 - 20929922
Alignment:
Q |
1058 |
tgtgcaatgttgtgattaattcacagcgcgacaaccgcaatct |
1100 |
Q |
|
|
|||||| |||||||||||||||||| |||||||||||| |||| |
|
|
T |
20929880 |
tgtgcattgttgtgattaattcacaccgcgacaaccgcgatct |
20929922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 94; Significance: 3e-45; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 918 - 1099
Target Start/End: Complemental strand, 11783577 - 11783396
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||| | |||| | ||||| |||||||||||||| ||||||||||| |
|
|
T |
11783577 |
ttttcaattgagatagatgaaaatcatatttttagtacatatttgatcataaattacacaatgttgtctccttgtctagtttagaactccaaatctatct |
11783478 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|| | ||||||| |||| || |||||||||||||| |||||||||||||||| |||| |||||| ||||||||| ||||| |
|
|
T |
11783477 |
cttgtttaagttctttatgttactatcattatttaagagttgtgcaatgttgtaattacttcacaaagcgacaaccacaatc |
11783396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 918 - 1079
Target Start/End: Original strand, 7299106 - 7299267
Alignment:
Q |
918 |
ttttcaattaagata-gatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatc |
1016 |
Q |
|
|
||||||||| ||||| |||||||| |||||||| | |||||| || || |||||||||||| |||||| |||||||||| ||||||| |||||||||||| |
|
|
T |
7299106 |
ttttcaattgagatacgatgaaaaccatattttaagtacatatttaatcataaattacataatgttatctccttatctactttagaa-ttcaaatctatc |
7299204 |
T |
|
Q |
1017 |
tctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattc |
1079 |
Q |
|
|
||||| ||||||||||||| || ||||| |||||||| |||||| |||||||||| ||||||| |
|
|
T |
7299205 |
tctagtttaagttatttacgttactatcgttatttaagagttgtacaatgttgtggttaattc |
7299267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 838 - 907
Target Start/End: Original strand, 7298925 - 7298994
Alignment:
Q |
838 |
gaggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaagtataggtagccgacgttaccg |
907 |
Q |
|
|
|||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
T |
7298925 |
gaggttttaaaaaacggtccgttaccgagaaaaaggccgcgacaaaaagtatcggtagccgacgttaccg |
7298994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1045 - 1082
Target Start/End: Original strand, 53527191 - 53527228
Alignment:
Q |
1045 |
attatttaaaagttgtgcaatgttgtgattaattcaca |
1082 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |
|
|
T |
53527191 |
attatttaaaagttgtgcaatgttgtgattaattcaca |
53527228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 2e-43; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 945 - 1099
Target Start/End: Original strand, 12990541 - 12990694
Alignment:
Q |
945 |
atttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatctctaggttaagttatttacattcctatc |
1044 |
Q |
|
|
||||||| |||||| ||||| |||||||||||| | |||| |||||||||||||||||||||||||||| ||||||| |||||||||||| || ||||| |
|
|
T |
12990541 |
atttttaatacatatttgatcataaattacataat-ttatctccttatctagtttagaacttcaaatctttctctagtttaagttatttaagttactatc |
12990639 |
T |
|
Q |
1045 |
attatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| |
|
|
T |
12990640 |
attatttaagagttgtgcaatgttgtgactaattcacaccgcgacaactgcaatc |
12990694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 919 - 1105
Target Start/End: Original strand, 34664779 - 34664964
Alignment:
Q |
919 |
tttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatctc |
1018 |
Q |
|
|
|||||||| |||||||||||||||||||||| | ||| || ||||| |||||||||||| ||||| | |||||||||||||||||| || |||| ||| |
|
|
T |
34664779 |
tttcaattgagatagatgaaaatcatatttt-agtacgtatttgatcataaattacataacgttatcttcttatctagtttagaactccatatctgtcta |
34664877 |
T |
|
Q |
1019 |
taggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataat |
1105 |
Q |
|
|
||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| | || ||||||| ||||| ||||| |
|
|
T |
34664878 |
tagtttaagttatttacgttactatcattatttaaaagttgtgcaatgttgtaattaattcataccgtgacaaccacaatccataat |
34664964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 913 - 1099
Target Start/End: Complemental strand, 32617744 - 32617560
Alignment:
Q |
913 |
gtatcttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatc |
1012 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||| ||||||||||||||| |||| ||| |
|
|
T |
32617744 |
gtattttttcaattgagatagatgaaaatcatatttttagtacatatttgatcataaattacataa-gttatctccttatctagttta-aactctaaaga |
32617647 |
T |
|
Q |
1013 |
tatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
| ||||||| |||||||||| | || ||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
T |
32617646 |
tttctctagtttaagttattcaagttactatcgttatttaagagttgtgcaatgttgtgattaatttacaccgcgacaaccgcaatc |
32617560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 918 - 1099
Target Start/End: Original strand, 9457617 - 9457794
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| |||||||| |||||||||||||| |||||| |||| ||||||||| | ||||| |||||| || |||||||||| |||||| | |
|
|
T |
9457617 |
ttttcaattgagatagataaaaatcatatttttgatacatatctgatcataaattactcaa-gttatctccttaccttgtttagaactcaaaatct---t |
9457712 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
T |
9457713 |
ctagtttaagttatttaagttactatcattatttaagagttgtgcaatgttgtgattaattcacaccgcaacaaccgcaatc |
9457794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 918 - 1099
Target Start/End: Original strand, 9461714 - 9461891
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| |||||||| |||||||||||||| |||||| |||| ||||||||| | ||||| |||||| || |||||||||| |||||| | |
|
|
T |
9461714 |
ttttcaattgagatagataaaaatcatatttttgatacatatctgatcataaattactcaa-gttatctccttaccttgtttagaactcaaaatct---t |
9461809 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
T |
9461810 |
ctagtttaagttatttaagttactatcattatttaagagttgtgcaatgttgtgattaattcacaccgcaacaaccgcaatc |
9461891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 918 - 1093
Target Start/End: Complemental strand, 14081872 - 14081707
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacat-actgttatttccttatctagtttagaacttcaaatctatc |
1016 |
Q |
|
|
||||||||| |||||||||||||||| ||||||| || ||| ||||| |||||||| | |||||| || ||||||| ||||||| |||||||| |
|
|
T |
14081872 |
ttttcaattgagatagatgaaaatcaaatttttagtatatatttgat----aattacattaatgttatctcattatctaatttagaa-----aatctatc |
14081782 |
T |
|
Q |
1017 |
tctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaacc |
1093 |
Q |
|
|
||||| |||||||||||| || || ||||||||||||||| |||||||||||||||||| |||| ||||||||| |
|
|
T |
14081781 |
tctagtttaagttatttaagttgct--cattatttaaaagttatgcaatgttgtgattaatgcacactgcgacaacc |
14081707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 838 - 909
Target Start/End: Complemental strand, 32617931 - 32617859
Alignment:
Q |
838 |
gaggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
|||||||||||||| |||| |||||||||||||||| || ||||||| ||||||||||| |||||||||||| |
|
|
T |
32617931 |
gaggttttaaaaaacggtcggttaccgagaaaaaggccgccacaaaaaggtataggtagcggacgttaccgtt |
32617859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 839 - 909
Target Start/End: Original strand, 9457446 - 9457517
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||||||||| | |||||||| ||||||| |||||||||| ||||||| ||| |||||| ||||| |
|
|
T |
9457446 |
aggttttaaaaaatggttcgttaccgagtaaaaggccgcgacaaaaaggtataggcagcggacgttgccgtt |
9457517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 839 - 909
Target Start/End: Original strand, 9461543 - 9461614
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||||||||| | |||||||| ||||||| |||||||||| ||||||| ||| |||||| ||||| |
|
|
T |
9461543 |
aggttttaaaaaatggttcgttaccgagtaaaaggccgcgacaaaaaggtataggcagcggacgttgccgtt |
9461614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 840 - 909
Target Start/End: Original strand, 12990144 - 12990214
Alignment:
Q |
840 |
ggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
|||||||||||| ||| | |||||||||||||||| |||| ||||| |||||||||| |||||||||||| |
|
|
T |
12990144 |
ggttttaaaaaacggttcgttaccgagaaaaaggctgcgataaaaaggtataggtagtggacgttaccgtt |
12990214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 918 - 997
Target Start/End: Complemental strand, 24699966 - 24699887
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagt |
997 |
Q |
|
|
||||||||| |||||||||||||| |||||||| || ||| ||||| ||| |||||||| |||||| | ||||||||| |
|
|
T |
24699966 |
ttttcaattgagatagatgaaaattatatttttcgtatatatttgataatatattacataatgttatctttttatctagt |
24699887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1064 - 1101
Target Start/End: Original strand, 963102 - 963139
Alignment:
Q |
1064 |
atgttgtgattaattcacagcgcgacaaccgcaatcta |
1101 |
Q |
|
|
||||||||||||||||||| | |||||||||||||||| |
|
|
T |
963102 |
atgttgtgattaattcacaccacgacaaccgcaatcta |
963139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 4e-41; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 918 - 1096
Target Start/End: Complemental strand, 23490139 - 23489962
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||| |||||||||||||||||||| ||||||| ||| |
|
|
T |
23490139 |
ttttcaattgagatagatgaaaatcatatttttcgtacatatttgatcataaattacataa-gttatctccttatctagtttagaactccaaatctttct |
23490041 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgca |
1096 |
Q |
|
|
|||| ||| ||| | || || |||||| ||||||| |||||| ||||||||||||||||||||| ||| ||||||||| |
|
|
T |
23490040 |
ctagtttatgttgtctaagttactatcagtatttaagagttgtacaatgttgtgattaattcacaccgcaacaaccgca |
23489962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 1010 - 1099
Target Start/End: Original strand, 13402173 - 13402262
Alignment:
Q |
1010 |
atctatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|||||| | ||| ||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
T |
13402173 |
atctatttttagtttaagttatttaccttactatcattatttaagagttgtgtaatgttgtgattaattcacaccgcgacaaccgcaatc |
13402262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1023 - 1104
Target Start/End: Original strand, 13396888 - 13396969
Alignment:
Q |
1023 |
ttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataa |
1104 |
Q |
|
|
||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||| |||| |
|
|
T |
13396888 |
ttaagttatttaccttactatcattatttaagagttgtgtaatgttgtgattaattcacaccgcgacagccgcaatccataa |
13396969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 918 - 1096
Target Start/End: Complemental strand, 7154439 - 7154249
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
|||| ||| ||||||||||||||||||||||||| |||||| ||||| ||| |||||||| | ||| ||||||||| || |||||| |||||||||| |
|
|
T |
7154439 |
ttttaaatgaagatagatgaaaatcatatttttaatacatatttgatcatatattacataattatatctccttatctgattcagaactcaaaatctatct |
7154340 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaa----------aag--ttgtgcaatgttgtgattaattcacagcgcgacaaccgca |
1096 |
Q |
|
|
| | ||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
7154339 |
atggtttaagttatttacggtattatcattatttaagactttatttaagacttgtgcaatgttgtgattaattcacatcacgacaaccgca |
7154249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1041 - 1092
Target Start/End: Original strand, 14370805 - 14370856
Alignment:
Q |
1041 |
tatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaac |
1092 |
Q |
|
|
|||||||| ||| |||||||||||||||||||||||||||| | ||||||| |
|
|
T |
14370805 |
tatcattaagtaagagttgtgcaatgttgtgattaattcacaccacgacaac |
14370856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 918 - 976
Target Start/End: Complemental strand, 14867423 - 14867365
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacat |
976 |
Q |
|
|
||||||||| |||| ||||||||||| ||||||| |||||| |||| ||||||||||| |
|
|
T |
14867423 |
ttttcaattgagatggatgaaaatcacatttttagtacatatttgaacataaattacat |
14867365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 839 - 896
Target Start/End: Complemental strand, 14867618 - 14867560
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaag-tataggtagc |
896 |
Q |
|
|
||||||||||||| ||||| |||| ||||||||||| |||||| |||| |||||||||| |
|
|
T |
14867618 |
aggttttaaaaaacggtccgttactgagaaaaaggccgcgacagaaagatataggtagc |
14867560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 23490309 - 23490243
Alignment:
Q |
841 |
gttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttacc |
906 |
Q |
|
|
|||||||| || |||| |||| ||||||||||| |||||||||| |||||||||||||| |||||| |
|
|
T |
23490309 |
gttttaaagaaccgtccgttactgagaaaaaggccgcgacaaaaaggtataggtagccgaagttacc |
23490243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 82; Significance: 4e-38; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 920 - 1093
Target Start/End: Original strand, 41283493 - 41283664
Alignment:
Q |
920 |
ttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatctct |
1019 |
Q |
|
|
||||||| ||||||||||||||| ||||||| |||| | |||| |||||||| ||| ||||| |||||||||||||||||||||||||||| ||||| |
|
|
T |
41283493 |
ttcaattgagatagatgaaaatcccatttttagtacaaatctgatcataaatta-ataa-gttatctccttatctagtttagaacttcaaatctttctct |
41283590 |
T |
|
Q |
1020 |
aggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaacc |
1093 |
Q |
|
|
|| |||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||| | |||||||| |
|
|
T |
41283591 |
agtttaagttatttatgttactatctttattcaaaagttgtgcaatgttgtgattaattcacaccacgacaacc |
41283664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 918 - 1092
Target Start/End: Complemental strand, 39426260 - 39426087
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatat-ttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatc |
1016 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||| ||| || ||||||| |||||||||| | ||||| |||| |
|
|
T |
39426260 |
ttttcaattaagatagatgaaaatcatatattttagtacatatttgatcataaattacataatgtcatctccttatatagtttagaa-tccaaatatatc |
39426162 |
T |
|
Q |
1017 |
tctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaac |
1092 |
Q |
|
|
| || |||||||||||||||| |||||| ||| || |||||||||||||||| ||||||||||| ||||||||| |
|
|
T |
39426161 |
tatat-ttaagttatttacattactatcaatatgtatgagttgtgcaatgttgtaattaattcacaccgcgacaac |
39426087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 918 - 1092
Target Start/End: Complemental strand, 22927236 - 22927061
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatac--ttgattataaattacatactgttatttccttatctagtttagaacttcaaatctat |
1015 |
Q |
|
|
||||||||| ||||||||||||||||||||||| |||| || ||||| |||||| ||||| |||||| || || ||||||||||||| || ||||||| |
|
|
T |
22927236 |
ttttcaattgagatagatgaaaatcatattttttgtacacacatttgatcataaatcacata-tgttatctcattgtctagtttagaacctcgaatctat |
22927138 |
T |
|
Q |
1016 |
ctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaac |
1092 |
Q |
|
|
|||||| |||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| ||||||||| |
|
|
T |
22927137 |
ctctagtttaagttatttatgttactttcattatttaagagttgggcaatgttgtgattaattcacgtcgcgacaac |
22927061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 918 - 1099
Target Start/End: Original strand, 36491494 - 36491666
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaatctatct |
1017 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||| || || |||| |||| ||||| ||||||||||||||| |||||||||| |
|
|
T |
36491494 |
ttttcaattaagatagatgaaaatcatatttttagtacatatttaatcataa---------tgttggttcctcatctagtttagaactcaaaatctatct |
36491584 |
T |
|
Q |
1018 |
ctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatc |
1099 |
Q |
|
|
|||| ||| ||||||||| || ||||||| |||||| | || ||||||||| ||||||||||||| || |||||||| |||| |
|
|
T |
36491585 |
ctagtttatgttatttactttactatcatcatttaagaattttgcaatgttatgattaattcacaccgtgacaaccgtaatc |
36491666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 918 - 1092
Target Start/End: Complemental strand, 13424806 - 13424636
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttcctta-tctagtttagaacttcaaatctatc |
1016 |
Q |
|
|
||||||||| | ||| |||||||| ||||||||| |||||| ||||| |||||| || || ||||| |||||| |||| ||||||| | |||||| || |
|
|
T |
13424806 |
ttttcaattgaaataaatgaaaataatatttttagtacatatttgatcataaatcacgtaa-gttatctccttaatctattttagaattctaaatctttc |
13424708 |
T |
|
Q |
1017 |
tctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcgacaac |
1092 |
Q |
|
|
|||| |||||||||||| || ||||||||||| |||||||||||||||||||||||||||| | ||||||| |
|
|
T |
13424707 |
tctattttaagttatttaagtt----tcattatttaagagttgtgcaatgttgtgattaattcacaccacgacaac |
13424636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 839 - 905
Target Start/End: Complemental strand, 13424954 - 13424887
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttac |
905 |
Q |
|
|
||||||||||| |||||||||||||||||||||| | |||| ||||| |||||||||||||| ||||| |
|
|
T |
13424954 |
aggttttaaaatatggtccattaccgagaaaaagaccgcgaaaaaaaggtataggtagccgatgttac |
13424887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 839 - 909
Target Start/End: Original strand, 19967312 - 19967383
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaa-gtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||||| ||||||||||||||||||||| || |||||| ||| |||||||||| ||||||||| |
|
|
T |
19967312 |
aggttttaaaaaacagtccattaccgagaaaaaggccacggcaaaaaggtacaggtagccgaagttaccgtt |
19967383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 918 - 977
Target Start/End: Complemental strand, 16341584 - 16341523
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgat--tataaattacata |
977 |
Q |
|
|
||||||||| ||||||||||||| |||||||||| |||||| ||||| ||||||||||||| |
|
|
T |
16341584 |
ttttcaattgagatagatgaaaaacatatttttagtacatatttgatcatataaattacata |
16341523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1060 - 1182
Target Start/End: Original strand, 19967627 - 19967749
Alignment:
Q |
1060 |
tgcaatgttgtgattaattcacagcgcgacaaccgcaatctataatacaatatatgtaacggccgaaatggtgaaatcatatacacgacctggaccttga |
1159 |
Q |
|
|
|||||||||||||||||||| || ||||||||||||||| | | ||| | ||||||||||||| | |||||| ||| | | |||| |||||||| |
|
|
T |
19967627 |
tgcaatgttgtgattaattctcactgcgacaaccgcaatcagtgttgcaacacccataacggccgaaatcgcgaaatcctatccgcaacctcgaccttga |
19967726 |
T |
|
Q |
1160 |
ccgcgaccgttgtttaaaacctt |
1182 |
Q |
|
|
| ||||||||| ||||||||||| |
|
|
T |
19967727 |
ctgcgaccgttatttaaaacctt |
19967749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1057 - 1100
Target Start/End: Original strand, 37247652 - 37247695
Alignment:
Q |
1057 |
ttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatct |
1100 |
Q |
|
|
||||||| |||||||||||||||||| |||||||||| |||||| |
|
|
T |
37247652 |
ttgtgcattgttgtgattaattcacaccgcgacaaccacaatct |
37247695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 839 - 909
Target Start/End: Original strand, 41283294 - 41283365
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaa-agtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||||| ||||| |||| ||||||||| | ||||||| |||||||||||| |||||||||||| |
|
|
T |
41283294 |
aggttttaaaaaacggtccgttactaagaaaaaggtcgtgacaaaaaagtataggtagcggacgttaccgtt |
41283365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 6e-34; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 918 - 1087
Target Start/End: Original strand, 9177588 - 9177760
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgatt------ataaattacatactgttatttccttatctagtttagaacttcaaat |
1011 |
Q |
|
|
||||||||| |||| ||||||||||||||||||| |||||| |||| | |||||||||||| |||||| || | ||||||||||||| ||||| |
|
|
T |
9177588 |
ttttcaattgagattgatgaaaatcatatttttagtacatatttgaatttgatcataaattacataatgttatctc---acctagtttagaactccaaat |
9177684 |
T |
|
Q |
1012 |
ctatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaattcacagcgcg |
1087 |
Q |
|
|
|||||| ||| ||||||||||||| || ||||||||||| || |||||||||||||||||||||||||||| |||| |
|
|
T |
9177685 |
ctatctttagtttaagttatttacgttactatcattattcaagagttgtgcaatgttgtgattaattcacaccgcg |
9177760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 979 - 1098
Target Start/End: Complemental strand, 26660726 - 26660607
Alignment:
Q |
979 |
tgttatttccttatctagtttagaacttcaaatctatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaatt |
1078 |
Q |
|
|
|||||| ||||| | |||||||||||| ||||||| ||| ||| |||| ||||||| || |||| | |||||| |||||||||||||||||||||||| |
|
|
T |
26660726 |
tgttatctccttgtatagtttagaactccaaatctttctttagtttaaattatttaagttactattgtgatttaagagttgtgcaatgttgtgattaatt |
26660627 |
T |
|
Q |
1079 |
cacagcgcgacaaccgcaat |
1098 |
Q |
|
|
|||| || |||||||||||| |
|
|
T |
26660626 |
cacaccgtgacaaccgcaat |
26660607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 979 - 1098
Target Start/End: Complemental strand, 26766697 - 26766578
Alignment:
Q |
979 |
tgttatttccttatctagtttagaacttcaaatctatctctaggttaagttatttacattcctatcattatttaaaagttgtgcaatgttgtgattaatt |
1078 |
Q |
|
|
|||||| ||||| | |||||||||||| ||||||| ||| ||| |||| ||||||| || |||| | |||||| |||||||||||||||||||||||| |
|
|
T |
26766697 |
tgttatctccttgtatagtttagaactccaaatctttctttagtttaaattatttaagttactattgtgatttaagagttgtgcaatgttgtgattaatt |
26766598 |
T |
|
Q |
1079 |
cacagcgcgacaaccgcaat |
1098 |
Q |
|
|
|||| || |||||||||||| |
|
|
T |
26766597 |
cacaccgtgacaaccgcaat |
26766578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1000
Target Start/End: Original strand, 32296363 - 32296445
Alignment:
Q |
918 |
ttttcaattaagatagatgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagttta |
1000 |
Q |
|
|
||||||||| |||||||||||||||||||||||| |||||| ||||| |||| ||||||| || ||| ||||||| ||||||| |
|
|
T |
32296363 |
ttttcaattgagatagatgaaaatcatatttttagtacatatttgatcataagttacataatggtatctccttatatagttta |
32296445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 935 - 1011
Target Start/End: Original strand, 10117185 - 10117259
Alignment:
Q |
935 |
tgaaaatcatatttttactacatacttgattataaattacatactgttatttccttatctagtttagaacttcaaat |
1011 |
Q |
|
|
||||||||||||||||| |||||| ||||| |||||||||||| | || |||||||||||||||||||| ||||| |
|
|
T |
10117185 |
tgaaaatcatatttttagtacatatttgatcataaattacata--ataatctccttatctagtttagaactccaaat |
10117259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 839 - 909
Target Start/End: Complemental strand, 8169310 - 8169240
Alignment:
Q |
839 |
aggttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaagtataggtagccgacgttaccgtt |
909 |
Q |
|
|
||||||||||||| | || ||||||||||||||| |||||||| |||||||||| ||||||||||||| |
|
|
T |
8169310 |
aggttttaaaaaactgcccgttaccgagaaaaaggtcacgacaaaaggtataggtagtcgacgttaccgtt |
8169240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1057 - 1104
Target Start/End: Original strand, 9771928 - 9771975
Alignment:
Q |
1057 |
ttgtgcaatgttgtgattaattcacagcgcgacaaccgcaatctataa |
1104 |
Q |
|
|
|||||||||||||||||||||||||| |||||| ||| ||||| |||| |
|
|
T |
9771928 |
ttgtgcaatgttgtgattaattcacaacgcgacgaccacaatccataa |
9771975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0989 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0989
Description:
Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 841 - 887
Target Start/End: Complemental strand, 2165 - 2119
Alignment:
Q |
841 |
gttttaaaaaatggtccattaccgagaaaaaggcggcgacaaaaagt |
887 |
Q |
|
|
||||||||||| |||| |||||||||||||||| |||||||||||| |
|
|
T |
2165 |
gttttaaaaaacggtctgttaccgagaaaaaggccgcgacaaaaagt |
2119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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