View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3210-1-Insertion-2 (Length: 461)
Name: NF3210-1-Insertion-2
Description: NF3210-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3210-1-Insertion-2 |
 | |
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| [»] chr7 (34 HSPs) |
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| [»] chr2 (11 HSPs) |
| |
|
| [»] chr1 (4 HSPs) |
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| [»] chr4 (4 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 34)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 8 - 461
Target Start/End: Complemental strand, 8629222 - 8628769
Alignment:
| Q |
8 |
atttgcaaacattaatttatattaatgcttatatctatgttagcagaacaaatgaatgacgagagtgttaacacttaacaagttgagttattttttcaga |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
8629222 |
atttgcaaacattaatttatattaatgcttatatctatgttagcagaacaaatgaatgacgagagtgttaacacttaacaatttgagttatattttcaga |
8629123 |
T |
|
| Q |
108 |
tgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaagcct |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8629122 |
tgccaagaggttaattggtaggaagtttagtgatcctgttgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaagcct |
8629023 |
T |
|
| Q |
208 |
atgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatt |
307 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8629022 |
atgattgctgttaagtacaagggtcaagagaagaacctatgtgctgaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatt |
8628923 |
T |
|
| Q |
308 |
tgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaa |
407 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8628922 |
tgaaatcacctgtaaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgctggccttaa |
8628823 |
T |
|
| Q |
408 |
tgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8628822 |
tgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttga |
8628769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 98 - 461
Target Start/End: Original strand, 8585274 - 8585637
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
8585274 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccgttgttcaaaatgatataatgttgtggccattcaaggttatctctggtgttaa |
8585373 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||| |
|
|
| T |
8585374 |
tgacaaacctatgattactgttaagtacaagggtcaagaaaagaacctatgtgctgaggaaatatcatctatcatcctcacaaacatgaagaagattgca |
8585473 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||| | |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8585474 |
gagacatatttgaaatcacctgttcaaaatgcagttgtgactgtgcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattg |
8585573 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8585574 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
8585637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 98 - 461
Target Start/End: Original strand, 13333024 - 13333387
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||| ||||||| | || |
|
|
| T |
13333024 |
ttttttcagatgctaagaggttaattggtaggaagtttagtgatccggttgttcaaaatgatataatgttgtggccattcaaggttacttctggtgtcaa |
13333123 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
||||||||||||||| | | ||||| ||||||| |||||||| || | ||||| ||||||||||||||||| ||||| |||| ||| || ||||| |
|
|
| T |
13333124 |
cgacaagcctatgattaccgctaagtgcaagggtcaagagaagcacttttgtgccgaggaaatatcatctatggtccttacaaagatgcgagaggttgca |
13333223 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||||| ||| || ||||| || || ||||| ||||| || ||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||| |||| |
|
|
| T |
13333224 |
gaggcatatatggggtcaccagtcaagaatgccgttgttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattg |
13333323 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||| | || | |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13333324 |
ctggccttaatatcattcgaataatcaatgaacctactgctgcagctattgcatatggccttga |
13333387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 96 - 461
Target Start/End: Complemental strand, 8668021 - 8667656
Alignment:
| Q |
96 |
tattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtctt |
195 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||| |||| |||||||||||||||||||||||| || |
|
|
| T |
8668021 |
tatttttgcagatgctaagaggttaattggtaggaagtttagtgaccccgttgttcaaagagatatattgttgtggccattcaaggttatttctggtgtt |
8667922 |
T |
|
| Q |
196 |
aatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattg |
295 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| |||||||| || | ||||| ||||||||||| ||||| | ||| |||| ||| || ||| |
|
|
| T |
8667921 |
aatgacaaacctatgattactgttaagtacaagggtcaagagaagcacttttgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttg |
8667822 |
T |
|
| Q |
296 |
cagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccat |
395 |
Q |
| |
|
| ||||| ||| || || || || || ||||| ||||| || ||||| ||||| ||||||||||||||| |||| |||||||| ||||||||| | || |
|
|
| T |
8667821 |
cggaggcatatctggggtcgccggtcaagaatgccgttgttactgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactat |
8667722 |
T |
|
| Q |
396 |
tgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||| |||||||| || |||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
8667721 |
tgctggacttaatgtcattcggataatcaatgaacctactgcggcagctattgcatatggccttga |
8667656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 98 - 461
Target Start/End: Original strand, 10493942 - 10494305
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
|||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||| ||| ||| | || |
|
|
| T |
10493942 |
tttttttagatgctaagaggttaattggcaggaagtttagtgatccggttgttcaaaacgatataatgttgtggccattcaaggttacttcaggtgtcaa |
10494041 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| ||||||||| | | ||||||||||||| |||||||| || | ||||| ||||||||||||||||| ||||| ||| ||| || ||||| |
|
|
| T |
10494042 |
tgacaaacctatgattaccgctaagtacaagggtcaagagaagcacttttgtgccgaggaaatatcatctatggtccttataaagatgcgagaggttgca |
10494141 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||||| |||||| ||||| || || ||||| ||||| || ||||| ||||| ||||| |||||||| |||| || || || ||||||||||| |||| |
|
|
| T |
10494142 |
gaggcatatttggggtcaccagtcaagaatgctgttgttactgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattg |
10494241 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10494242 |
ctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttga |
10494305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 98 - 461
Target Start/End: Complemental strand, 8655050 - 8654687
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||| |||| |
|
|
| T |
8655050 |
tttttttagatgctaagaggttaattggtaggaagtatagtgatcctattgttcaaaaggatatcatgttgtggccattcatggttacttctggtgttaa |
8654951 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| || |||||| ||||||||||||| ||| |||||||| | | ||||| ||||||||||||||| | ||| |||| ||| |||||||| |
|
|
| T |
8654950 |
tgacaaacccatgattactgttaagtacaaaggtcaagagaagcaattttgtgctgaggaaatatcatctgcggttcttacaaagatgcgagagattgca |
8654851 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||||| || | |||||| || ||||||| ||||| || ||||| || || |||||||| |||||| ||||||| ||||| |||||||||||||||| |
|
|
| T |
8654850 |
gaggcataccttggatcacccgtcaaaaatgtcgttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattg |
8654751 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||| ||||| || || ||||| |||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
8654750 |
ctggacttaacgtcattcggatactcaatgaacctactgccgcagctattgcatatggccttga |
8654687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 117 - 461
Target Start/End: Original strand, 8671217 - 8671561
Alignment:
| Q |
117 |
gttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaagcctatgattgct |
216 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||| || |
|
|
| T |
8671217 |
gttaattggtaggaagtttagtgatccggttgttcaaagagatatattgttgtggccattcaaggttatttctggtgttaatgacaaacctatgattact |
8671316 |
T |
|
| Q |
217 |
gttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatttgaaatcac |
316 |
Q |
| |
|
|| |||||| | ||| ||||||| | | ||||| ||||||||||| ||||| | ||| |||| ||| || |||| ||||| ||| || | |||| |
|
|
| T |
8671317 |
gtcaagtacgaaggtctagagaagcaattttgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggagtcac |
8671416 |
T |
|
| Q |
317 |
ctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgag |
416 |
Q |
| |
|
| || || ||||| ||||| |||||||| ||||| ||||||||||||||| ||| |||||||| ||||||||| | |||||||| |||||||| || | |
|
|
| T |
8671417 |
cggtcaagaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcg |
8671516 |
T |
|
| Q |
417 |
gataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8671517 |
gataatcaatgaacctactgctgcagctattgcatatggccttga |
8671561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 100 - 455
Target Start/End: Complemental strand, 8659961 - 8659606
Alignment:
| Q |
100 |
ttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatg |
199 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||| | |||||||||| || || ||||| ||||||||||||||||| ||||| | || | |
|
|
| T |
8659961 |
ttttcagatgcaaagagattaattggtaggaagtttagtgattcagttgttcaaaaagacatgatgttgtggccattcaaggttatcgctggtgtgaacg |
8659862 |
T |
|
| Q |
200 |
acaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgcag |
298 |
Q |
| |
|
|||| | |||||| |||| ||||||||||| | |||||| || | ||||||||||||||||||||||| | ||| |||| ||| ||||| |||||| |
|
|
| T |
8659861 |
acaaactcatgattaatgttcagtacaagggtcaggagaagcacttttgtgcggaggaaatatcatctatggtacttacaaaaatgcgagaag-ttgcag |
8659763 |
T |
|
| Q |
299 |
aggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgc |
398 |
Q |
| |
|
|| | ||| | | |||||||| || ||||| ||||| || |||||||| || ||||||||||||||| ||||||||||||| ||| | ||||||||||| |
|
|
| T |
8659762 |
agacatatctaatgtcacctgtgaagaatgctgttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgc |
8659663 |
T |
|
| Q |
399 |
tggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||||||||||| || |||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
8659662 |
tggccttaatgtcattcagataattaatgaacctactgctgcagctattgcatatgg |
8659606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 94 - 461
Target Start/End: Complemental strand, 6790116 - 6789749
Alignment:
| Q |
94 |
gttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtc |
193 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| ||||| |||||||||||||| ||| |||| |
|
|
| T |
6790116 |
gttattttttcagatgctaagaggttaattggtaggaagtttagtgattctgttgttcaaaatgatatgatgttttggccattcaaggtcattgctggcg |
6790017 |
T |
|
| Q |
194 |
ttaatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagat |
293 |
Q |
| |
|
| ||||||||||| ||||||| |||| |||| |||||| | |||||| | ||||||| |||||| | || ||||| ||||| | || ||| | |||| |
|
|
| T |
6790016 |
tcaatgacaagcccatgattgttgttgagtataagggtgaggagaagcaactatgtgttgaggaagtttcgtctatgatcctcaccaagatgcgggagat |
6789917 |
T |
|
| Q |
294 |
tgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcc |
393 |
Q |
| |
|
||| ||| |||||| | ||| | |||||||||||| | || |||||||||||||||||||||||||| | |||||||| | |||||||||||| |
|
|
| T |
6789916 |
tgctgagaaatatttgcagtcagagataaaaaatgcagttattactgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgcc |
6789817 |
T |
|
| Q |
394 |
attgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||| || ||||| ||| |||||||||||||||| |
|
|
| T |
6789816 |
attgctggtcttaatgttatacgaataatcaatgaaccaacagctgctgctcttgcatatggccttga |
6789749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 95 - 455
Target Start/End: Complemental strand, 3147875 - 3147515
Alignment:
| Q |
95 |
ttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtct |
194 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||||||||| ||||| | |||||||||| ||||| ||||| |||||||||||||| |||| || | |
|
|
| T |
3147875 |
ttattttgttagatgcaaagaggttaattggtaggaagtttggtgattctgttgttcaaaatgatatgatgttgtggccattcaaggtcatttgcggagt |
3147776 |
T |
|
| Q |
195 |
taatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagatt |
294 |
Q |
| |
|
|||||||| || |||||| | ||||||| |||||| | |||||| |||||||||| || ||||| |||||||| | || |||| ||| |||| | |
|
|
| T |
3147775 |
gaatgacaaacccatgatttcggttaagtgcaagggacaggagaagcacctatgtgctgaagaaatctcatctatggttctaacaaagatgcgcaagact |
3147676 |
T |
|
| Q |
295 |
gcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcca |
394 |
Q |
| |
|
||||||| | ||| ||| ||||| || ||||||||||| ||||| |||||||||||||||||| ||||| | ||||| || || |||||||||| | |
|
|
| T |
3147675 |
gcagaggagtttttagaattgcctgtcaagaatgcagttgttaccgtacctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgtta |
3147576 |
T |
|
| Q |
395 |
ttgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
3147575 |
ttgctggccttaatattatgcggataatcaatgaacctactgctgcagctattgcgtatgg |
3147515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 98 - 455
Target Start/End: Complemental strand, 1302064 - 1301703
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||| || || ||||| |||||||||||||| || | ||| | || |
|
|
| T |
1302064 |
ttttttcagatgctaagagattaattggtaggaagtttagtgattcagttgttcaaaaagacatgatgttgtggccattcaaggtcatcgccggtgtgaa |
1301965 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatg-aagaagattgc |
296 |
Q |
| |
|
|||||| || |||||| |||||||||||||||| | |||||| || | || | |||||||||||||||||| ||||| | || ||| |||| ||||| |
|
|
| T |
1301964 |
tgacaaacccgtgattgttgttaagtacaagggtcaggagaagcacttttgcgtggaggaaatatcatctatggtccttacgaagatgcgagaa-attgc |
1301866 |
T |
|
| Q |
297 |
agaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
|||| | ||| | | ||||| || | |||||| ||||| || |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||| |
|
|
| T |
1301865 |
agagacatatctaatgtcaccagtgacaaatgctgttgttactgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaatt |
1301766 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaac----ccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||||||||||||| || |||||| ||||||| | ||||||||||||||||| ||||| |
|
|
| T |
1301765 |
gctggccttaatgtcattcagataattaatgaacctagctactgctgcagctattgcgtatgg |
1301703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 105 - 461
Target Start/End: Original strand, 27830450 - 27830806
Alignment:
| Q |
105 |
agatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaag |
204 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||| |||||||||| ||||| | || |||| |||||| || ||| ||| | | || |||| |
|
|
| T |
27830450 |
agatgctaagaggttaattggtaggaagttcagcgatgatgttgttcaaaaagatataaacttgtggctattcaaagtcattactgatgtaaacaacaaa |
27830549 |
T |
|
| Q |
205 |
cctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggctt |
304 |
Q |
| |
|
|| ||| ||| ||||||||||||| || | ||||| || |||||||||||||||| ||||| || ||||| |||| ||| |||| || ||||| | |
|
|
| T |
27830550 |
cccatgtttgttgttaagtacaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagatcgcggaggcat |
27830649 |
T |
|
| Q |
305 |
atttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggcct |
404 |
Q |
| |
|
||||| ||||||| ||||| |||||||| | |||||||| |||||||||||||| ||||| |||||||||| | ||| | ||||||||||||||||| |
|
|
| T |
27830650 |
atttgcaatcaccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggcct |
27830749 |
T |
|
| Q |
405 |
taatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||||| ||||||| | || || ||||||||||||||||||||||||||||| |
|
|
| T |
27830750 |
taatgttatgcggataataagcgagcctactgctgcagctattgcatatggccttga |
27830806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 460
Target Start/End: Complemental strand, 17268533 - 17268177
Alignment:
| Q |
104 |
cagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaa |
203 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||| | || ||||| ||||| |||| |||||||||||||| ||| | | | | |||||||| |
|
|
| T |
17268533 |
cagatgctaagagactaattggtaggaagtttagtgatcctgtggtccaaaaagatataatgtcgtggccattcaaggtcattgcggatatgaatgacaa |
17268434 |
T |
|
| Q |
204 |
gcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggct |
303 |
Q |
| |
|
|| |||||| | | ||||||||||| ||||| || | ||||| |||||||| || ||||| | || |||| ||| | ||||||| |||| |
|
|
| T |
17268433 |
accaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatttcgtctatggtactcacaaagatgcgggagattgctgaggaa |
17268334 |
T |
|
| Q |
304 |
tatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggcc |
403 |
Q |
| |
|
||| | ||||| | |||| ||||| || | || || || ||||| ||||| ||||||||| ||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
17268333 |
tatctagaatcatcggttatgaatgctgtcattactgtcccggcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggcc |
17268234 |
T |
|
| Q |
404 |
ttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttg |
460 |
Q |
| |
|
||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
17268233 |
ttaatgtattgaaggtaatcaatgaaccaactgctgcagctattgcatatggccttg |
17268177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 104 - 459
Target Start/End: Original strand, 7877307 - 7877662
Alignment:
| Q |
104 |
cagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaa |
203 |
Q |
| |
|
||||||| |||||||| ||||| ||||| | ||| ||| | || |||| || ||||| |||| |||||||| |||||| || ||||| | ||||||| |
|
|
| T |
7877307 |
cagatgcaaagaggttgattggaaggaaatatagcgattctgttattcagaatgatattctgttgtggccatttaaggttgttgctggttctgatgacaa |
7877406 |
T |
|
| Q |
204 |
gcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggct |
303 |
Q |
| |
|
|||| || ||||||||| ||||| | || ||| || | ||||| |||||||||||||| || |||||| |||| ||| ||||||||||| |
|
|
| T |
7877407 |
gcctgatatcattgttaagtataagggcgaggaaaagcacttttgtgccgaggaaatatcatccatgatccttacaaagatgcgcgagattgcagagaag |
7877506 |
T |
|
| Q |
304 |
tatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggcc |
403 |
Q |
| |
|
| |||| | |||||||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| | ||||||||||| |||| |||| |
|
|
| T |
7877507 |
tttttggagtcacctgtcaagaatgcagttgttactgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcc |
7877606 |
T |
|
| Q |
404 |
ttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
| ||||||||| ||||||| |||||||| |||||||| || |||||||||||||| |
|
|
| T |
7877607 |
tcaatgttatgcggataattaatgaaccaactgctgctgcccttgcatatggcctt |
7877662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 461
Target Start/End: Complemental strand, 8647474 - 8647114
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||| ||||||| ||||||||||| |||||||||||| |||| | ||||||| || |||| | ||| |||||||||||||| ||| || | || |
|
|
| T |
8647474 |
tttttccagatgctaagaggttaatcggtaggaagttttttgattctgttgttcagaatgataagaagttgtggccattcaaggtcatt---ggggtgaa |
8647378 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| || |||||| |||||| ||||||||| |||||||| ||||| |||||||||||||| || ||||| |||| ||| || ||||| |
|
|
| T |
8647377 |
tgacaaacccatgattattgttaaatacaagggtgaagagaagcgttattgtgctgaggaaatatcatcgatgatcctcacaaagatgcgagaggttgca |
8647278 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||| ||||| | || ||||| || ||||||||||| || |||||||| || |||||||||| |||| |||||||||| || ||||| || ||||||| |
|
|
| T |
8647277 |
gagaaatatttaatgtcccctgtaaagaatgcagttgttactgtgcctgcatacttcaatgattatcagcgaaaagccactatagatgccggggccattg |
8647178 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||| | || |||||||||||||||| || ||||| ||| | |||||||||||||| |
|
|
| T |
8647177 |
ctggccttaatatcatccggataatcaatgaaccaacagctgctgctctcgcatatggccttga |
8647114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 95 - 460
Target Start/End: Complemental strand, 17260844 - 17260479
Alignment:
| Q |
95 |
ttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtct |
194 |
Q |
| |
|
||||||| ||||||| ||||| || |||||||||||||||||||||| | || ||||| ||||| |||| |||||||||||||| ||| | | | | |
|
|
| T |
17260844 |
ttattttgacagatgctaagagactagttggtaggaagtttagtgatcctgtggtccaaaaagatataatgtcgtggccattcaaggtcattgcggatat |
17260745 |
T |
|
| Q |
195 |
taatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagatt |
294 |
Q |
| |
|
|||||||| || |||||| | | ||||||||||| ||||| || | ||||| |||||||| || ||||| | |||| || ||| | ||||| |
|
|
| T |
17260744 |
gaatgacaaaccaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatctcgtctatggtacttgtgaagatgcgggagatt |
17260645 |
T |
|
| Q |
295 |
gcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcca |
394 |
Q |
| |
|
|| |||| ||| | ||||| | |||| |||| ||| | || || |||||||||||||||||||||||| ||||||||||||| |||||||||| | |
|
|
| T |
17260644 |
gctgaggtatatcttgaatcatcggttattaatgttgttattactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgtta |
17260545 |
T |
|
| Q |
395 |
ttgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttg |
460 |
Q |
| |
|
||||||||||| ||||| ||| | |||| |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
17260544 |
ttgctggcctttatgttttgaagttaattaatgaacctattgctgcagctattgcatatggccttg |
17260479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 97 - 459
Target Start/End: Complemental strand, 8582301 - 8581939
Alignment:
| Q |
97 |
attttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtctta |
196 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| | ||||||| ||||||||||||||||||||| ||| ||||| |||||||| | | ||| || |
|
|
| T |
8582301 |
attttttcagatgcaaagaggttaattggaaggaaatatagtgattccattgttcaaaaggatatcaagttgtggcccttcaaggtcaccgcaggtgcta |
8582202 |
T |
|
| Q |
197 |
atgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgc |
296 |
Q |
| |
|
||||||| || | || | ||| || ||||||||| | || || || | ||| || |||||||||||| |||| || || | ||| ||||||| |
|
|
| T |
8582201 |
atgacaaaccgacaatcgttgtgaactacaagggtaaggaaaaacactttcttgctgaagaaatatcatctgttattctgacacagatgcgagagattgc |
8582102 |
T |
|
| Q |
297 |
agaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
|||||| | |||| | ||||||||||| |||||||| | || || ||||||||||| |||||||| || ||| |||||| | ||||| |||| ||| |
|
|
| T |
8582101 |
agaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccactaaagatgcaggtgaaatt |
8582002 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
|| || || ||||| ||| |||||||||||||||| ||||| |||||| |||||||||||||| |
|
|
| T |
8582001 |
gcaggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatatggcctt |
8581939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 313 - 459
Target Start/End: Complemental strand, 8602359 - 8602213
Alignment:
| Q |
313 |
tcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgtta |
412 |
Q |
| |
|
|||||||| || ||||||||||| || ||||| |||||||| |||||||||||| |||||||||| | |||||||||||||||||||| || ||||| | |
|
|
| T |
8602359 |
tcacctgtcaagaatgcagttgttactgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaa |
8602260 |
T |
|
| Q |
413 |
tgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
|| ||||||||||||| || ||||| || ||| |||||||||||||| |
|
|
| T |
8602259 |
tgcggataatcaatgagccaactgcagctgctcttgcatatggcctt |
8602213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 169 - 455
Target Start/End: Original strand, 8635982 - 8636268
Alignment:
| Q |
169 |
tggccattcaaggttatttctggtcttaatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatcta |
268 |
Q |
| |
|
||||| || ||||| ||| |||||| | ||||||| || ||||||| ||| || ||||||||| || | ||| | || | | | ||||||||||| |||| |
|
|
| T |
8635982 |
tggccctttaaggtaattgctggtcgtgatgacaaacccatgattgttgtgaaatacaagggtgaacaaaagcaactttttcctgaggaaatatcgtcta |
8636081 |
T |
|
| Q |
269 |
ttatccttgcaaatatgaagaagattgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagag |
368 |
Q |
| |
|
| |||| |||| ||| ||||||| ||||| ||| || ||||| |||| || |||||||| | || ||||| ||||||||||||||||||||| | |
|
|
| T |
8636082 |
tggtcctgacaaagatgcgagagattgctgaggcatatctggaatcatctgtcaagaatgcagtcattactgtgcccgcttatttcaatgattctcagcg |
8636181 |
T |
|
| Q |
369 |
aaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
||| |||||| ||||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||||| |||| ||||| |
|
|
| T |
8636182 |
taaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgctgcagcttttgcgtatgg |
8636268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 95 - 455
Target Start/End: Original strand, 29577234 - 29577594
Alignment:
| Q |
95 |
ttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtct |
194 |
Q |
| |
|
|||||| | ||||||| |||||||||||||| ||||| || |||||| ||||| ||| || ||||| | ||| ||||| || ||||| ||| |||| |
|
|
| T |
29577234 |
ttatttatgcagatgcgaagaggttaattggaaggaaattcagtgattccattattcggaaagatataaagttgtggccctttaaggtcattcctggagc |
29577333 |
T |
|
| Q |
195 |
taatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagatt |
294 |
Q |
| |
|
| ||||||| || | ||| ||||||||||||||| |||||||| | | ||| ||||||||||| ||||| ||||| |||| ||| || ||||| |
|
|
| T |
29577334 |
tgatgacaatcccaagatccttgttaagtacaagggcaaagagaagtgctttgttgctgaggaaatatcgtctatgatcctctcaaagatgcaggagatt |
29577433 |
T |
|
| Q |
295 |
gcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcca |
394 |
Q |
| |
|
|||||| | |||| | | ||| || || |||||||| |||| ||||| ||||||||||||||||||||| |||||||||||| ||||| || | |
|
|
| T |
29577434 |
gcagagaaatttttggagttacccgtaaagaatgcagtgatcacagtgccagcttatttcaatgattctcagcgaaaagccaccaaagatgccggcatta |
29577533 |
T |
|
| Q |
395 |
ttgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||||||||| ||||| ||| |||||||||||||||| |||||||| || |||||||||| |
|
|
| T |
29577534 |
ttgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatgg |
29577594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 455
Target Start/End: Original strand, 29581527 - 29581766
Alignment:
| Q |
216 |
tgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatttgaaatca |
315 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||| ||||||||||||||||| ||||| |||| ||| | | ||||||||| | |||| ||| |
|
|
| T |
29581527 |
tgttaagtacaagggtgaagagaagaggtttgttgctgaggaaatatcatctatgatcctctcaaagatgcatgatattgcagagaaatttttggaattg |
29581626 |
T |
|
| Q |
316 |
cctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatga |
415 |
Q |
| |
|
||||| || |||||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||||| || |||||||| ||||| |||| |
|
|
| T |
29581627 |
cctgtaaagaatgcagtgattaccgtgcctgcttatttcaatgattctcagcgaaaagccaccaaagatgctggcattatagctggcctcaatgtaatga |
29581726 |
T |
|
| Q |
416 |
ggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
29581727 |
ggataatcaacgaaccaactgctgctgcacttgcatatgg |
29581766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 313 - 459
Target Start/End: Complemental strand, 8538421 - 8538275
Alignment:
| Q |
313 |
tcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgtta |
412 |
Q |
| |
|
|||||||| ||||||||||| | || || |||||||||||||||||||| ||| ||| |||||||| |||||||||| |||||||||||| ||||| | |
|
|
| T |
8538421 |
tcacctgtcaaaaatgcagtgattacagtacctgcttatttcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcctcaatgtaa |
8538322 |
T |
|
| Q |
413 |
tgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
|| |||||||||||||||| || ||||| ||| ||||||| |||||| |
|
|
| T |
8538321 |
tgcggataatcaatgaacctacagctgctgctcttgcatacggcctt |
8538275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 8382671 - 8382805
Alignment:
| Q |
325 |
aatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatca |
424 |
Q |
| |
|
|||| |||||| ||||||||||| ||||||||||||||||| | |||||||| | ||||||||||| ||||||||||| ||||| ||| ||||||||| |
|
|
| T |
8382671 |
aatgtagttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgcggataatca |
8382770 |
T |
|
| Q |
425 |
atgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
|||| || ||||| || ||| |||||||||||||| |
|
|
| T |
8382771 |
atgagccaactgccgctgctcttgcatatggcctt |
8382805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 455
Target Start/End: Complemental strand, 8610366 - 8610160
Alignment:
| Q |
249 |
tgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgct |
348 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||| ||||| |||| || ||| | |||| | ||| |||||| ||||||| |||| ||||||||| |
|
|
| T |
8610366 |
tgcggaggaaatttcatctatgatccttgcaaaaatgaaagagatagccgagaaatttttggagtcaaaggttaaagatgcagtgatcactgtgcctgct |
8610267 |
T |
|
| Q |
349 |
tatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattg |
448 |
Q |
| |
|
||||| |||||||||||| | |||||||| | |||||||||| |||| ||||||||||||| || |||| ||||||||||| || ||||| ||| ||| |
|
|
| T |
8610266 |
tattttaatgattctcagcggaaagccacaaaagatgctggtgtcatttctggccttaatgtaatccggattatcaatgaaccaacggctgcggctcttg |
8610167 |
T |
|
| Q |
449 |
catatgg |
455 |
Q |
| |
|
||||||| |
|
|
| T |
8610166 |
catatgg |
8610160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 459
Target Start/End: Complemental strand, 8591023 - 8590877
Alignment:
| Q |
313 |
tcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgtta |
412 |
Q |
| |
|
|||||||| || ||||||||||| || ||||| |||||||| |||||||||||||| ||||| |||| |||||||||| |||||||||| | ||||| | |
|
|
| T |
8591023 |
tcacctgtcaagaatgcagttgttactgtgccagcttattttaatgattctcagaggaaagctaccaaagatgctggtgtcattgctggcttgaatgtaa |
8590924 |
T |
|
| Q |
413 |
tgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
|| ||||||| |||||||| ||||| || | |||||||||||||| |
|
|
| T |
8590923 |
tgcggataattaatgaaccaactgccgctggccttgcatatggcctt |
8590877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 455
Target Start/End: Complemental strand, 8559694 - 8559576
Alignment:
| Q |
337 |
accgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactg |
436 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||| |||||||| ||||| |||| |||||||| |||||||| ||| ||||||||||||||| |||| |
|
|
| T |
8559694 |
accgtacctgcttattttaatgattctcaaagaagagccaccaaagatgcaggtgaaattgctggtcttaatgtaatgcagataatcaatgaaccaactg |
8559595 |
T |
|
| Q |
437 |
ctgcagctattgcatatgg |
455 |
Q |
| |
|
| || ||| |||||||||| |
|
|
| T |
8559594 |
cagctgctcttgcatatgg |
8559576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 459
Target Start/End: Complemental strand, 8546232 - 8545871
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||| ||||||| |||||||||||||| ||||| | ||||||| || ||||||| || ||| | |||| ||||| || ||||| ||||| ||| |||| |
|
|
| T |
8546232 |
tttttgcagatgcaaagaggttaattggaaggaaatatagtgattcctttgttcagaatgatctactgttgtggccctttaaggtcatttccggtgttaa |
8546133 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| || | ||| ||| || ||||||||| | || ||| || | ||| || |||||||||||| | ||||| || | ||| |||||||| |
|
|
| T |
8546132 |
tgacaaaccgacaattcttgtgaactacaagggtgaggaaaagcactttgttgctgaagaaatatcatctgtgatcctctcacagatgcgagagattgca |
8546033 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||||| | |||| | ||||||||||| |||||||| | || || ||||||||||| |||||||| || || | |||| | ||||| |||| |||| |
|
|
| T |
8546032 |
gaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacaaagatccacaaaagatgcaggtgaaattg |
8545933 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
| || || ||||| ||| |||||||||||||||| ||||| || ||| |||||||||||||| |
|
|
| T |
8545932 |
ccggtctaaatgtcatgcggataatcaatgaaccgactgcggcggctcttgcatatggcctt |
8545871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 459
Target Start/End: Complemental strand, 8570719 - 8570550
Alignment:
| Q |
290 |
agattgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctgg |
389 |
Q |
| |
|
|||||||||| || | |||| | || |||||||| |||||||| | || || ||||||||||| |||||||| || ||| |||||| | ||||| || |
|
|
| T |
8570719 |
agattgcagaagcatttttggagtctcctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccactaaagatgcagg |
8570620 |
T |
|
| Q |
390 |
tgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
|| |||||||| || ||||| ||| |||||||||||||||| ||||| |||||| |||||||||||||| |
|
|
| T |
8570619 |
tgaaattgctggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatatggcctt |
8570550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 459
Target Start/End: Complemental strand, 8576734 - 8576565
Alignment:
| Q |
290 |
agattgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctgg |
389 |
Q |
| |
|
||||||||||||||| | || | |||||||||| |||||||| | | |||||||||||||| |||||||| || ||| |||||| | ||||| || |
|
|
| T |
8576734 |
agattgcagaggcttttctgcagacacctgttaagaatgcagtgatttctgtgcctgcttattttaatgattcccaacgaagagccactaaagatgcagg |
8576635 |
T |
|
| Q |
390 |
tgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
||| |||||||| || ||||| ||| ||||||||||||||| ||||| |||||| |||| ||||||||| |
|
|
| T |
8576634 |
tgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgcggcagctcttgcgtatggcctt |
8576565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 408
Target Start/End: Original strand, 8640342 - 8640425
Alignment:
| Q |
325 |
aatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaat |
408 |
Q |
| |
|
||||||||||| || |||||||||| |||||||||| |||| |||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
8640342 |
aatgcagttgttactatgcctgcttacttcaatgattatcagcaaaaagccaccatagatgccggggccattgctggccttaat |
8640425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 8588109 - 8588034
Alignment:
| Q |
99 |
tttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggcca |
174 |
Q |
| |
|
|||||||||||| |||||||| | || ||||||||||| || ||||||||||||| ||||| ||||| |||||| |
|
|
| T |
8588109 |
tttttcagatgcaaagaggttggtctgtgggaagtttagttattccattgttcaaaatgatatgatgttgtggcca |
8588034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 8576927 - 8576865
Alignment:
| Q |
97 |
attttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggat |
159 |
Q |
| |
|
|||||| ||||| | |||||||||||||| ||||| | ||||||| |||||||||| |||||| |
|
|
| T |
8576927 |
atttttacagatacaaagaggttaattggaaggaaatatagtgattccattgttcagaaggat |
8576865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 461
Target Start/End: Complemental strand, 39986024 - 39985883
Alignment:
| Q |
320 |
ttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggat |
419 |
Q |
| |
|
|||| ||||| ||||| || || |||||||| || ||||| || ||| | |||| |||| ||||||||| | ||||| || |||||||| ||| | || |
|
|
| T |
39986024 |
ttaagaatgctgttgttactgtccctgcttactttaatgactcccagcgtcaagctaccaaggatgctggagttattgccggtcttaatgtcatgcgaat |
39985925 |
T |
|
| Q |
420 |
aatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||| ||||||||||| || ||||| ||||| ||||| |
|
|
| T |
39985924 |
tatcaatgagcccactgctgctgccattgcttatggtcttga |
39985883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 449
Target Start/End: Original strand, 8017208 - 8017332
Alignment:
| Q |
325 |
aatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatca |
424 |
Q |
| |
|
||||| ||||| || || || ||||| ||||||||||| ||| | ||||||| | |||||| |||| |||||| || || |||||| |||| || |||| |
|
|
| T |
8017208 |
aatgccgttgttacagttccagcttacttcaatgattcgcagcgtcaagccacaaaggatgccggtgtcattgcaggactcaatgttttgagaattatca |
8017307 |
T |
|
| Q |
425 |
atgaacccactgctgcagctattgc |
449 |
Q |
| |
|
| || || || |||||||||||||| |
|
|
| T |
8017308 |
acgagccaacagctgcagctattgc |
8017332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 208; Significance: 1e-113; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 102 - 461
Target Start/End: Original strand, 16661564 - 16661923
Alignment:
| Q |
102 |
ttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgac |
201 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| ||| |||||||||| ||||| |||| ||||| |||||||||||| ||||| |||||||| |
|
|
| T |
16661564 |
ttcagatgctaagaggttaattggtaggaaatttagtgaccccgttgttcaaaaagatatactgttgtggccgttcaaggttattgctggtgttaatgac |
16661663 |
T |
|
| Q |
202 |
aagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagagg |
301 |
Q |
| |
|
|| |||| |||| |||||||||||||||| | |||||| ||| ||||| |||||||| ||||||||| |||| |||| |||||| || ||||||||| |
|
|
| T |
16661664 |
aaacctacgattagtgttaagtacaagggtcaggagaagctcctttgtgccgaggaaatctcatctattgtcctcacaaacatgaaggaggttgcagagg |
16661763 |
T |
|
| Q |
302 |
cttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctgg |
401 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||| || ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
16661764 |
cttatttggaatcaccggttaaaaatgcagttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgctgg |
16661863 |
T |
|
| Q |
402 |
ccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16661864 |
ccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttga |
16661923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 98 - 461
Target Start/End: Original strand, 16657085 - 16657448
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| || |||||||| |||||||||||||||||||| |||||||||| |||||||| || |||||||||||||| ||| | || | || |
|
|
| T |
16657085 |
ttttttcagatgctaaaaggttaatcggtaggaagtttagtgatcctgttgttcaaaatgatatcatcttgtggccattcaaggtcattgccggagtgaa |
16657184 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgc |
296 |
Q |
| |
|
|||||| || |||||| || || |||| |||||| |||||| | | ||||| ||||||||||||||||| |||||| |||| ||| ||||| |||| |
|
|
| T |
16657185 |
tgacaaaccaatgattactcttcagtataagggtcaagagagccaattttgtgctgaggaaatatcatctatgatccttacaaagatgcgagaag-ttgc |
16657283 |
T |
|
| Q |
297 |
agaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
||||| | | || | || ||||| || ||||| ||||| || ||||| ||||| ||||||||||| ||| ||||||||||||| |||||||||||||| |
|
|
| T |
16657284 |
tgaggcatttatggagtcgcctgtcaagaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatc |
16657383 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||||||||| || | || ||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
16657384 |
gctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttga |
16657448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 94 - 461
Target Start/End: Complemental strand, 12235293 - 12234926
Alignment:
| Q |
94 |
gttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtc |
193 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| | ||| | ||||| |||||||||||||| | ||||| |
|
|
| T |
12235293 |
gttaatttttcagatgctaagaggttaattggtaggaagtttagtgatcaagttgttcaagatgatgtgatgttgtggccattcaaggtcgctgctggtg |
12235194 |
T |
|
| Q |
194 |
ttaatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaaga |
292 |
Q |
| |
|
| |||||||| || |||||| ||| |||||||||||| ||||||| | |||||| | || ||| |||||||||| | || |||| ||| |||| | |
|
|
| T |
12235193 |
tcaatgacaaacccatgattattgtcaagtacaagggtcgagagaagcagctatgtcccgaagaagtatcatctatggtactcacaaagatgcgagaa-a |
12235095 |
T |
|
| Q |
293 |
ttgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgc |
392 |
Q |
| |
|
| || ||||| ||||| ||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| || || |||||||||| |
|
|
| T |
12235094 |
tcgctgaggcatatttacaatttccagttaagaatgcagttgttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgt |
12234995 |
T |
|
| Q |
393 |
cattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||||||| |||||||||||| |||| || ||||||| || || ||| |||||||||| ||||| |
|
|
| T |
12234994 |
cattgctggcctcaatgttatgagggtaatgaacgaacccatggcagccgctgttgcatatggtcttga |
12234926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 99 - 461
Target Start/End: Complemental strand, 14704007 - 14703645
Alignment:
| Q |
99 |
tttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaat |
198 |
Q |
| |
|
|||||||||||| |||||||| | || ||||||||||| ||||| ||||||||| | ||||| | || |||||||| ||||| | | |||| | || |
|
|
| T |
14704007 |
tttttcagatgctaagaggttgttgggaaggaagtttagcgatcctattgttcaagatgatatacttttatggccatttaaggtcactgctggagtcgat |
14703908 |
T |
|
| Q |
199 |
gacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgca |
297 |
Q |
| |
|
||||| || |||||| | ||||||||||||| | | |||||||| || | ||| || ||| |||||||||| | || | || ||| |||| ||||| |
|
|
| T |
14703907 |
gacaaacccatgattacggttaagtacaaggatcaggagaagaagctctatgccgaagaagtatcatctatggtactggtgaagatgcgagaa-attgct |
14703809 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||| | ||||| | ||| ||||||| ||||||||||| || |||||||||||||| | ||||||||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
14703808 |
gagacatatttagagtcaactgttaagaatgcagttgttacggtgcctgcttattttagtgattctcaaagaaaagccactatggatgctggtgttattg |
14703709 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
| ||||| |||||||||||| |||| |||||||| || |||||||||||||||||||||||||| |
|
|
| T |
14703708 |
ccggcctcaatgttatgagggtaatgaatgaacctacagctgcagctattgcatatggccttga |
14703645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 98 - 461
Target Start/End: Original strand, 12244974 - 12245337
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| | ||| | || ||||| |||||||| | | ||||| | || |
|
|
| T |
12244974 |
ttttttcagatgctaagagattaattggtaggaagtttagtgatcctattgttctggatgatgcattattatggccgttcaaggtcactgctggtgtcaa |
12245073 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgc |
296 |
Q |
| |
|
|||||| || || ||| ||||||| ||||| || | |||||| | |||||||| || ||| |||||||||| | || |||| ||| |||| ||||| |
|
|
| T |
12245074 |
tgacaaaccaataattactgttaactacaaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacaaagatgcgagaa-attgc |
12245172 |
T |
|
| Q |
297 |
agaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
||||| ||||| ||||||| || || ||||| ||||| || || ||||||||||| | |||||||||| ||||||| || || |||||||| | ||| |
|
|
| T |
12245173 |
tgaggcatatttagaatcaccggtaaagaatgctgttgttactgtacctgcttattttagtgattctcagcgaaaagcaacgatagatgctggctcaatt |
12245272 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||| || |||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12245273 |
gctggtctcaatgttatgagggtaatgaatgaacccactgctgcagctgttgcatatggccttga |
12245337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 98 - 461
Target Start/End: Complemental strand, 11999994 - 11999631
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| | ||| |||| |||||||||||||| | | ||| | | || |
|
|
| T |
11999994 |
ttttttcagatgctaagaggttaattggttggaagtttagtgatcttgttgttcaagatgatggattgttatggccattcaaggtcactgctgatgtcaa |
11999895 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgc |
296 |
Q |
| |
|
|||||| || || ||| ||||||||||||| || | |||||| | |||||||| || ||| |||||||||| | || | || ||| |||| ||||| |
|
|
| T |
11999894 |
tgacaaaccaataattactgttaagtacaaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaa-attgc |
11999796 |
T |
|
| Q |
297 |
agaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
||||| ||||| ||||||| || || |||| ||||| || || || |||||||| | ||||||||| |||||||||| || ||||| ||||| ||| |
|
|
| T |
11999795 |
tgaggcatatttagaatcaccggtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaatt |
11999696 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||| | |||||||| ||| |||| |||||||||||||||||| || |||||||||||||||| |
|
|
| T |
11999695 |
gctggcatcaatgttataagggtaatgaatgaacccactgctgcaactgttgcatatggccttga |
11999631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 105 - 461
Target Start/End: Complemental strand, 7542819 - 7542463
Alignment:
| Q |
105 |
agatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaag |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||| | ||||| |||| |||||||||||||| | | | ||| ||||||| |
|
|
| T |
7542819 |
agatgctaagaggttaattggtaggaagtttagtgatcctgttgttcaagatgatatactgttatggccattcaaggtgactgcgggtgacaatgacaga |
7542720 |
T |
|
| Q |
205 |
cctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgcagaggct |
303 |
Q |
| |
|
|| |||||| | ||||||||||||| | | ||||| | || ||| || || |||||||||| | || |||| ||| |||| ||||| ||| | |
|
|
| T |
7542719 |
cccatgattaccgttaagtacaaggatcaggagaaacaactccatgctgaagaggtatcatctatggtactcacaaagatgcgagaa-attgctgagtcg |
7542621 |
T |
|
| Q |
304 |
tatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggcc |
403 |
Q |
| |
|
||||| || || |||| | ||||||||||| || || ||||||||||| ||||||||||| |||||||||| || ||||| |||||||||||||||| |
|
|
| T |
7542620 |
tatttagaaacaactgtgacgaatgcagttgttactgtacctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcc |
7542521 |
T |
|
| Q |
404 |
ttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
| |||||||||||| ||| |||||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
7542520 |
tcaatgttatgagggcaatgaatgaacctactgccgcagctgttgcatatggccttga |
7542463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 461
Target Start/End: Original strand, 12258155 - 12258512
Alignment:
| Q |
104 |
cagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaa |
203 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| | |||||| | ||||| ||||| |||||||| || || | | ||||| | |||| ||| |
|
|
| T |
12258155 |
cagatgctaagaggttaattggtaggaagtttagtgatcaagtagttcaagatgatataatgttgtggccatttaaagtcactgctggtgtcaatggcaa |
12258254 |
T |
|
| Q |
204 |
gcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgcagaggc |
302 |
Q |
| |
|
|| |||||| | || ||||||||| | |||||||| | || ||||| |||||| |||||||| | | | |||| ||| |||| ||||| ||||| |
|
|
| T |
12258255 |
acccatgattacggtaaagtacaagaatcaagagaagcagctttgtgccgaggaagtatcatctgtggtattgacaaagatgcgagaa-attgctgaggc |
12258353 |
T |
|
| Q |
303 |
ttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggc |
402 |
Q |
| |
|
||||| ||||||| ||||| ||||||||||| || |||||||| ||||| | |||||| || || |||||||| || |||| ||| |||| |||| |
|
|
| T |
12258354 |
atatttagaatcacccgttaagaatgcagttgttactgtgcctgcatattttagtgattcacaaaggaaagccactatagatgtgggtaatattgttggc |
12258453 |
T |
|
| Q |
403 |
cttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|| |||||||||| |||| | |||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
12258454 |
ctgaatgttatgaagatattaaatgaacctactgctgcagcttttgcatatggccttga |
12258512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 98 - 459
Target Start/End: Complemental strand, 43626010 - 43625651
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||| ||||||| ||||||||||| |||||||||||||||||| | |||||||||| ||||||||||| |||||||||| ||| ||| || | | |
|
|
| T |
43626010 |
tttttccagatgctaagaggttaatcggtaggaagtttagtgattctgttgttcaaaatgatatcatgttgtggccattcagggtcatt---ggggtgga |
43625914 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| || |||||| ||| || ||||||||| |||||||| | ||| | ||||||||||| ||||| ||||| |||| ||| || ||||| |
|
|
| T |
43625913 |
tgacaaaccaatgattattgtaaaatacaagggtcaagagaagcgtttttgtcctgaggaaatatcgtctatgatcctcacaaagatgcgagaggttgca |
43625814 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaa-aatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
||| | ||| | || || |||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||| |||| |
|
|
| T |
43625813 |
gagaaatttttaatgtccccccgtaaagaatgcagttgttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcatt |
43625714 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcctt |
459 |
Q |
| |
|
| |||||||||||| | | ||||||||||||| || ||||| ||| | ||||| |||||| |
|
|
| T |
43625713 |
gtcggccttaatgttttacgagtaatcaatgaaccaacagctgctgctctagcatacggcctt |
43625651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 455
Target Start/End: Original strand, 17716483 - 17716618
Alignment:
| Q |
320 |
ttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggat |
419 |
Q |
| |
|
|||| ||||| ||||| || || |||||||| || ||| |||||||||| |||| || | | |||||||||| |||||||| |||||| | ||||| || |
|
|
| T |
17716483 |
ttaagaatgccgttgttactgtccctgcttactttaatttttctcagagacaagctactaagcatgctggtgctattgctggtcttaatttcatgagaat |
17716582 |
T |
|
| Q |
420 |
aatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|| ||||| |||||||||||||| ||||| ||||| |
|
|
| T |
17716583 |
tattaatgagcccactgctgcagccattgcttatgg |
17716618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 39373460 - 39373417
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgat |
141 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
39373460 |
ttttttcagatgctaagaggttaattggtaggaagtttaatgat |
39373417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 99 - 461
Target Start/End: Original strand, 34466362 - 34466724
Alignment:
| Q |
99 |
tttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaat |
198 |
Q |
| |
|
|||||||||||| |||||||||||||| || || ||||||||||| |||||||| ||||| ||||| ||||||||||| |||||| ||||| ||||| |
|
|
| T |
34466362 |
tttttcagatgctaagaggttaattggcagaaaatttagtgatcctgatgttcaaacagatatgatgttatggccattcaaagttattgctggtgttaat |
34466461 |
T |
|
| Q |
199 |
gacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcag |
298 |
Q |
| |
|
|||||||| |||||| | ||||||| |||||| | |||||| |||||||||| |||||||| |||||||| |||||| |||| ||| | | | ||||| |
|
|
| T |
34466462 |
gacaagccaatgatttcccttaagtataagggtcaggagaagcacctatgtgctgaggaaatctcatctatgatcctttcaaagatgcgggatactgcag |
34466561 |
T |
|
| Q |
299 |
aggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgc |
398 |
Q |
| |
|
||| |||||| ||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| | ||||| |
|
|
| T |
34466562 |
aggaatatttggaatcaccaattaagaatgcagttatcaccgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgc |
34466661 |
T |
|
| Q |
399 |
tggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34466662 |
tggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttga |
34466724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 94 - 461
Target Start/End: Complemental strand, 15595641 - 15595271
Alignment:
| Q |
94 |
gttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccatt-gttcaaaaggatatcatgttctggccattcaaggttatttctggt |
192 |
Q |
| |
|
||||||||||||||||| ||||| ||||| ||||||||||||||||| | || |||||||| ||||| | ||| |||||||||||||| ||| ||| |
|
|
| T |
15595641 |
gttattttttcagatgctaagagattaatcagtaggaagtttagtgattctgtttgttcaaaatgatataaagttgtggccattcaaggtcatt---ggt |
15595545 |
T |
|
| Q |
193 |
cttaatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaaga |
292 |
Q |
| |
|
| |||||||| || |||||| |||||| ||||||||| |||| ||| | | ||||| ||||||||||| ||||| || || ||| ||| || |
|
|
| T |
15595544 |
gtgaatgacaaacccatgattattgttaaatacaagggtcaagaaaagcgcttttgtgctgaggaaatatcgtctatgattctcaaaaagatgcgagagg |
15595445 |
T |
|
| Q |
293 |
ttgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgc |
392 |
Q |
| |
|
|||||||| | ||| | || || || || ||||||||||| ||||||||||||||| ||||||||||||| |||||||||| || ||||| ||||| |
|
|
| T |
15595444 |
ttgcagagaaattttt--agtctcccgtaaacaatgcagttgttaccgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgc |
15595347 |
T |
|
| Q |
393 |
cattgctggccttaatgttatgaggataatcaatgaacc-------cactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
15595346 |
cattgctggccttaatgttatacgggtaatcaatgaaccgacagctgacagctgcagctattgcatatggccttga |
15595271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 98 - 455
Target Start/End: Original strand, 4678126 - 4678483
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||| || ||||||| | |||||||||| || |||||||| |||||||| | ||| || ||||| || |
|
|
| T |
4678126 |
tttttgcagatgctaagaggttaattggtaggaggtatagtgattctgttgttcaaaaagacatcatgttgtggccatttagggtcatcactggtgagaa |
4678225 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagattgc |
296 |
Q |
| |
|
||| || || |||||| |||||||||||||||| |||||||| | | ||| |||||||||||||| || |||||| |||| |||| ||||| |||| |
|
|
| T |
4678226 |
tgataaaccgatgattagtgttaagtacaagggtcaagagaagcaagttagtgttgaggaaatatcatcgatgatccttacaaagatgagagaag-ttgc |
4678324 |
T |
|
| Q |
297 |
agaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccatt |
396 |
Q |
| |
|
|| | ||| | | || |||| || |||| ||||| || |||||||| || |||||||||||||| ||||||| ||||| ||||||||||||||| |
|
|
| T |
4678325 |
cgaaacatatctaacttcgtctgtgaagaatgtcgttgttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccatt |
4678424 |
T |
|
| Q |
397 |
gctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
||||| |||||||| || |||||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
4678425 |
gctggacttaatgtcattcaaataatcaacgaacctactgttgcagctattgcatatgg |
4678483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 52549102 - 52549172
Alignment:
| Q |
112 |
aagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggt |
182 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||| | ||||| |||| ||| |||||||||| |
|
|
| T |
52549102 |
aagaggttaattggtaagaagtttagtgatcctgttgttcaagatgatatattgttatggtcattcaaggt |
52549172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 156; Significance: 1e-82; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 94 - 461
Target Start/End: Original strand, 9335455 - 9335822
Alignment:
| Q |
94 |
gttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtc |
193 |
Q |
| |
|
||||||||| ||||||| ||||| |||| |||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |
|
|
| T |
9335455 |
gttatttttgcagatgctaagagattaactggtaggaagtttagtgatctggttgttcaaagagatatattgttgtggccattcaaggttatttctggtg |
9335554 |
T |
|
| Q |
194 |
ttaatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagat |
293 |
Q |
| |
|
|||||||||| ||||||||| ||||||| ||||||||| |||||||| || | ||||| ||||||||||| ||||| | ||| |||| |||| || | |
|
|
| T |
9335555 |
ttaatgacaaacctatgattactgttaactacaagggtcaagagaagcacttttgtgctgaggaaatatcttctatgttgcttacaaagatgagagaggt |
9335654 |
T |
|
| Q |
294 |
tgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcc |
393 |
Q |
| |
|
||| ||||| |||||| || || || || ||||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||| | |
|
|
| T |
9335655 |
tgcggaggcatatttggggtcgccggtcaagaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtact |
9335754 |
T |
|
| Q |
394 |
attgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9335755 |
attgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttga |
9335822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 98 - 461
Target Start/End: Complemental strand, 30775852 - 30775489
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| ||||| || || |||||||||| ||||| |||| ||||||||||||||| |||||||| |||| |
|
|
| T |
30775852 |
ttttttcagatgctaaaaggttaattggtaggaaatttagcgaccctgttgttcaaaaagatattttgttgtggccattcaaggttgtttctggtgttaa |
30775753 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| || |||||| | |||||| |||||| | ||||| ||| ||||| |||||||| ||||| || |||| ||||||||| |||||||| |
|
|
| T |
30775752 |
tgacaaacccatgatttcccttaagttcaagggccaggagaaactcctctgtgccgaggaaatttcatcaatagtcctcacaaatatgagagagattgca |
30775653 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||| |||||| |||| || ||||||||||||||| |||| ||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||| |
|
|
| T |
30775652 |
gagatgtatttggaatccccagttaaaaatgcagttatcactgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattg |
30775553 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
30775552 |
ctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
30775489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 95 - 461
Target Start/End: Complemental strand, 35133049 - 35132685
Alignment:
| Q |
95 |
ttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtct |
194 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| | ||||| || | |||||||||||||| | | | ||| | |
|
|
| T |
35133049 |
ttattttttcagatgctaaaaggttaattggtaggaagtttagtgatcctattgttcaagatgatatactgctatggccattcaaggtcactgccggtgt |
35132950 |
T |
|
| Q |
195 |
taatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatga-agaagat |
293 |
Q |
| |
|
|||||||| || |||||| | ||||||||||||| | | || ||| | || | |||||| ||| ||||||| || | || |||| ||| |||| || |
|
|
| T |
35132949 |
aaatgacaaacccatgattacggttaagtacaaggatgaggaaaagcaactctatgcggaagaagtatcatccatggtactcacaaagatgcgagaa-at |
35132851 |
T |
|
| Q |
294 |
tgcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcc |
393 |
Q |
| |
|
||||| || ||||| ||||| ||||||| ||||||||||| || |||||||||||||| | ||||||||| |||||||||| || ||||||||||| |
|
|
| T |
35132850 |
tgcag--gcatatttagaatcaactgttaagaatgcagttgttactgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgct |
35132753 |
T |
|
| Q |
394 |
attgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|||||||| | ||||||||||| |||| |||||||| ||||| ||||| |||||||||||||||| |
|
|
| T |
35132752 |
attgctggtcccaatgttatgagagtaatgaatgaacctactgccgcagcggttgcatatggccttga |
35132685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 461
Target Start/End: Original strand, 23596375 - 23596516
Alignment:
| Q |
320 |
ttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggat |
419 |
Q |
| |
|
|||| ||||| ||||| ||||||||||| || ||||| ||||| || | |||| || | ||||||||||| |||| |||| || ||||| ||||| || |
|
|
| T |
23596375 |
ttaagaatgccgttgtaaccgtgcctgcatacttcaacgattcacaacgtcaagctactaaggatgctggtgtcatttctggactcaatgtgatgagaat |
23596474 |
T |
|
| Q |
420 |
aatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
|| || || ||||||||||| |||||||| ||||| ||||| |
|
|
| T |
23596475 |
tattaacgagcccactgctgccgctattgcttatggtcttga |
23596516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 98 - 455
Target Start/End: Complemental strand, 43745447 - 43745092
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||| |||| | ||||||||| ||||| | ||| ||||| |||||||| ||||| || | || |
|
|
| T |
43745447 |
ttttgtcagatgctaagaggttaattggtaggaagtttaatgattctgatgttcaaaatgatatgaagttgtggccgttcaaggtcatttccggattgaa |
43745348 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
|||||| || ||||| |||||||||||||||| | |||||| |||||||||| || ||||| |||||||| || || |||| ||| |||||||| |
|
|
| T |
43745347 |
tgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatctcatctatgattctaacaaagatgcgtgagattgca |
43745248 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||| | | |||| ||| ||||| || ||||||||||| || ||||| |||||||||||||||| |||| | |||||||| | |||||||||||||||| |
|
|
| T |
43745247 |
gagacatttttgcaattgcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccacta--gatgctggtgccattg |
43745150 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43745149 |
ctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
43745092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 456
Target Start/End: Complemental strand, 12528889 - 12528746
Alignment:
| Q |
313 |
tcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattgctggccttaatgtta |
412 |
Q |
| |
|
||||||||||| |||||||| | || ||||| || |||||||||||||| ||| || |||||||| ||||||||||| |||||||||||| ||||| | |
|
|
| T |
12528889 |
tcacctgttaagaatgcagtgattacggtgccagcgtatttcaatgattcgcagcgacgagccaccaaggatgctggtgtcattgctggcctcaatgtaa |
12528790 |
T |
|
| Q |
413 |
tgaggataatcaatgaacccactgctgcagctattgcatatggc |
456 |
Q |
| |
|
| |||||||||| ||||| ||||| || ||| ||||||||||| |
|
|
| T |
12528789 |
tacggataatcaacgaaccaactgcagctgctcttgcatatggc |
12528746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 98 - 455
Target Start/End: Complemental strand, 28220551 - 28220194
Alignment:
| Q |
98 |
ttttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaa |
197 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| | |||||||| | ||||| | ||| |||||||||||||| ||||| || || |
|
|
| T |
28220551 |
ttttttcagatgctaagaggttaattggtaggaagtttagtgactctgttgttcaagatgatataaagttgtggccattcaaggtcatttccggaacgaa |
28220452 |
T |
|
| Q |
198 |
tgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgca |
297 |
Q |
| |
|
||||| || |||||| |||||||||||||||| | |||||| |||||||||| || ||||| |||||||| | || |||| ||| |||||||| |
|
|
| T |
28220451 |
cgacaaacccatgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatctcatctatggttctaacaaagatgcgtgagattgca |
28220352 |
T |
|
| Q |
298 |
gaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgccattg |
397 |
Q |
| |
|
||||| | |||| ||| ||||| || ||||||||| | || |||||||||||||||||||||| |||| | ||||||||||| ||||| ||| |||||| |
|
|
| T |
28220351 |
gaggcctttttggaatttcctgtcaagaatgcagttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattg |
28220252 |
T |
|
| Q |
398 |
ctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
455 |
Q |
| |
|
|||| || |||||| | |||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
28220251 |
ctggtctaaatgttctaaggatagtcaatgaacccactgctgctgctattgcatatgg |
28220194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 440
Target Start/End: Original strand, 42555760 - 42555830
Alignment:
| Q |
370 |
aaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgc |
440 |
Q |
| |
|
|||||||| || ||||| ||| | |||||||| || |||||||||| |||||||||||||||||||||||| |
|
|
| T |
42555760 |
aaagccacaatagatgcaggtactattgctggtctgaatgttatgaagataatcaatgaacccactgctgc |
42555830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 344
Target Start/End: Original strand, 42555530 - 42555758
Alignment:
| Q |
116 |
ggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaagcctatgattgc |
215 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||| || || | ||| |||||||||||||| ||||| || | |||| |||||| |||||| |
|
|
| T |
42555530 |
ggttaattggtaggaagtttaatgattatgttgttcaaaatgacatgaagttgtggccattcaaggtcatttccggaataaatggcaagcccatgattta |
42555629 |
T |
|
| Q |
216 |
tgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagattgcagaggcttatttgaaatca |
315 |
Q |
| |
|
||| | |||| |||| | ||||| ||||||| || || ||||| |||||||| || || |||| ||| |||||||||||||| | |||| || |
|
|
| T |
42555630 |
tgtaacgtacgagggacaggagaaacacctatgcgccgaagaaatctcatctatgattctaacaaagatgcgcaagattgcagaggcatttttggaaatg |
42555729 |
T |
|
| Q |
316 |
cctgttaaaaatgcagttgtcaccgtgcc |
344 |
Q |
| |
|
||||| || ||||||||||| || ||||| |
|
|
| T |
42555730 |
cctgtcaagaatgcagttgttactgtgcc |
42555758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 458
Target Start/End: Complemental strand, 28911185 - 28910822
Alignment:
| Q |
95 |
ttattttttcagatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtct |
194 |
Q |
| |
|
||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||||||| ||| ||||| | ||| |||||||| ||| | ||| | |
|
|
| T |
28911185 |
ttattttgacagatgctaagaggataattgataggaagtttagtgatcccgttgttcaaaacgattcaatgttgtcgccgttcaaggtcattgccggtgt |
28911086 |
T |
|
| Q |
195 |
taatgacaagcctatgattgctgttaagtacaagggttaagagaagaacctatgtgcggaggaaatatcatctattatccttgcaaatatgaagaagatt |
294 |
Q |
| |
|
|||||||| || ||||| |||| |||||||||| | | |||||||| ||||||| |||||||| |||||| | | || |||| || ||||| |
|
|
| T |
28911085 |
caatgacaaccccatgatatctgtcaagtacaaggatcaggagaagaaattatgtgctgaggaaatctcatctgtggttctctcaaagattcgcgagatt |
28910986 |
T |
|
| Q |
295 |
gcagaggcttatttgaaatcacctgttaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagagaaaagccaccatggatgctggtgcca |
394 |
Q |
| |
|
|||| | | | |||| ||| || || || |||||| |||| || || ||| |||||||||||||||| |||| ||||||||||| ||||||||||||| |
|
|
| T |
28910985 |
gcagtgacatttttggaattgcccgtcaagaatgcaattgttactttgactggttatttcaatgattcttagaggaaagccaccatagatgctggtgcca |
28910886 |
T |
|
| Q |
395 |
ttgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggcct |
458 |
Q |
| |
|
||| | |||||||||||| ||||||||||||| | |||||||| ||||||| |||||||||| |
|
|
| T |
28910885 |
ttgtcaggcttaatgttatgcggataatcaatgagctcactgctgtagctatttcatatggcct |
28910822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 461
Target Start/End: Complemental strand, 11170886 - 11170807
Alignment:
| Q |
382 |
gatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttga |
461 |
Q |
| |
|
||||| ||||| ||||||||||| |||||| || | ||| ||||||| || ||||| || || ||||||||||||||||| |
|
|
| T |
11170886 |
gatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
11170807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 11171163 - 11171047
Alignment:
| Q |
105 |
agatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaag |
204 |
Q |
| |
|
|||||| |||||| |||||||| |||| |||||||||||||| || |||| ||| | | ||| ||||||||||| || ||| || || |||||||| |
|
|
| T |
11171163 |
agatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaatgacaaa |
11171064 |
T |
|
| Q |
205 |
cctatgattgctgttaa |
221 |
Q |
| |
|
|| ||||||| |||||| |
|
|
| T |
11171063 |
cccatgattgttgttaa |
11171047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 11276547 - 11276431
Alignment:
| Q |
105 |
agatgccaagaggttaattggtaggaagtttagtgatcccattgttcaaaaggatatcatgttctggccattcaaggttatttctggtcttaatgacaag |
204 |
Q |
| |
|
|||||| |||||| |||||||| |||| |||||||||||||| || |||| ||| | | ||| ||||||||||| || ||| || || |||||||| |
|
|
| T |
11276547 |
agatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaatgacaaa |
11276448 |
T |
|
| Q |
205 |
cctatgattgctgttaa |
221 |
Q |
| |
|
|| ||||||| |||||| |
|
|
| T |
11276447 |
cccatgattgttgttaa |
11276431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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