View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4350_high_4 (Length: 316)
Name: NF4350_high_4
Description: NF4350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4350_high_4 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 16 - 316
Target Start/End: Original strand, 42068792 - 42069089
Alignment:
| Q |
16 |
ctattctctatataaaaacaaaaggaatagaaaattcaaaattgtcaaacctacacttgaaatttattgatatatttgtcaaacctacacttgaagttta |
115 |
Q |
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| T |
42068792 |
ctattctctatataaaaacaaaaggaatagaaaattcaaaattgtcaaacctacacttgaaatttattgatatatttgtcaaacctacacttgaagttta |
42068891 |
T |
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| Q |
116 |
ttgaaatattgtgatgaatataataaatagatggaaaacctaaattaacttaatgaagatatgaataaattaaaatgaatacgttcttggtggtgatttt |
215 |
Q |
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| T |
42068892 |
ttgaaatattgtgatgaatataa---atagatggaaaacctaaattaacttaatgaagatatgaataaattaaaatgaatacgttcttggtggtgatgtt |
42068988 |
T |
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| Q |
216 |
attaaaaacatatcatactaattagtcgaaccggtccaatcgagaaccgatgtcataaacgatcctaattttggacatgattataaatcattgttgatgt |
315 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
42068989 |
attaaaaacatatcatactaattagttgaaccggtccaatcgagaaccgatgtcataaacgatcctaattttggacatgattataaatcagtgttgatgt |
42069088 |
T |
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