View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4356_high_2 (Length: 306)
Name: NF4356_high_2
Description: NF4356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4356_high_2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 37503904 - 37503600
Alignment:
| Q |
1 |
taatgtaggagagtttgatattactattagagtagataatgatgatggtgattctggtgtatcatctagtgaaagaccaaataaaaataatattgcttaa |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37503904 |
taatgtaggagagtttgatattattattagagtagataatgatgatggtgattctggtgtatcatctagtgaaagaccaaataaaaataatattgcttaa |
37503805 |
T |
|
| Q |
101 |
tttgttagcaaaataaatggaagaagaaatacaacctgtgaagaggaaattttccatggaatcatcttctacttcaataatatacatttcatgatctgtc |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37503804 |
tttgttagcaaaataaatggaagaggaaatacaacctgtgaagaggaaattttccatggaatcatcttctacttcaataatatacatttcatgatctgtc |
37503705 |
T |
|
| Q |
201 |
aagtttaaagatcaatcaatggtgctgattaaaggattattaaggaatgggtattgctctacnnnnnnngcatgtcttctatttacaaattactagtcca |
300 |
Q |
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|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |
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| T |
37503704 |
aagtttaaagatcaatgaatggtgctgattcaaggattattaaggaatgggtattgttctactttttttgcatgtcttctatttacaaa-tactagtcca |
37503606 |
T |
|
| Q |
301 |
tctttc |
306 |
Q |
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|||||| |
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| T |
37503605 |
tctttc |
37503600 |
T |
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