View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4356_high_3 (Length: 277)
Name: NF4356_high_3
Description: NF4356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4356_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 10595703 - 10595443
Alignment:
| Q |
16 |
tgtggtggtatagggtggttataattgctagcataaggccaaggttgttcataagggaagggtgatttggtcatttgaggaggaacaagttcaatgccag |
115 |
Q |
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| T |
10595703 |
tgtggtggtatagggtggttataattgctagcataaggccaaggttgttcataagggaagggtgatttggtcatttgaggaggaacaggttccatgcttg |
10595604 |
T |
|
| Q |
116 |
gatgatggtaatgagggaatggtatttggtttctttgaaatgggtatgagtccatgtttctgtatccaggaatcatgtttgtttggaaaggttaccaaga |
215 |
Q |
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|||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10595603 |
gatggtgataataagggaatggtatttggtttctttgaaatgggtatgagtccatgtttctgtatccaggaatcatgtttgtttggaaaggttaccaaga |
10595504 |
T |
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| Q |
216 |
acagacagaactagattttcactggctgatcttggaaagttattatagcacaaactctgca |
276 |
Q |
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| T |
10595503 |
acagacagaactagattttcactggctgatcttggaaagttattatagcacaaactctgca |
10595443 |
T |
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