View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4410-Insertion-4 (Length: 519)
Name: NF4410-Insertion-4
Description: NF4410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4410-Insertion-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 483; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 8 - 519
Target Start/End: Complemental strand, 33716304 - 33715793
Alignment:
| Q |
8 |
tggcaaacatgttttggaagagacaagtactgcaggtcaagcttcctcaatttaactgccccctgtcagaagaataaggtggacttagcaatatttcaat |
107 |
Q |
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| T |
33716304 |
tggcaaacatgttttggaagagacaagtactgcaggtcaagcttcctcaatttaactgccccctgtcagaagaatgaggtggacttagcaatatttcaat |
33716205 |
T |
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| Q |
108 |
tagatgataaatcacaattacatcatgaacttggctgtaagagcatattatagcaaattctctttgattaccttctcgaaaggcaatggcagtccaactg |
207 |
Q |
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| T |
33716204 |
tagatgataaatcacaattacatcatgaacttggctgtaagagcatattatagcaaattctcttcgattaccttctcgaaaggcaatggcagtccaactg |
33716105 |
T |
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| Q |
208 |
aacaaagttgaaaatttcgattttccctcacaattagcgctaagtatttatcactaaaatcaacatcttcaataactaaatctgggtcatcaacaattac |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33716104 |
aacaaagttgaaaatttcgattttccctcacaattagcgctaagtatttatcactaaaatcaacatcttcaataactaaatctgggtcatcaacaattac |
33716005 |
T |
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| Q |
308 |
ctcctgcagtttatgaggcgtaatataacatgtaaggtcaagttgactgtcctaggcaagtgaaccnnnnnnncacgaaaacaagtaattgtaatatcaa |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
33716004 |
ctcctgcagtttatgaggcgtaatataacatgtaaggtcaagttgactgtcctaggcaagtgaaccaaaaaaacacgaaaacaagtaattgtaatatcaa |
33715905 |
T |
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| Q |
408 |
catatctctcactttctcaagtaaatgcctgctttgcattcatgcaaaagagtaataataaaactaaaacaagacaactgtagaaaaatgtaatattcca |
507 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33715904 |
catatctctcactttctcaagtaaatgcctgctttgcattcatgcaaaagagtaataataaaactaaaacaagacaactgtagaaaaatgtaatattcca |
33715805 |
T |
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| Q |
508 |
aactacctccca |
519 |
Q |
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|||||||||||| |
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| T |
33715804 |
aactacctccca |
33715793 |
T |
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