View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4410_high_5 (Length: 440)

Name: NF4410_high_5
Description: NF4410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4410_high_5
NF4410_high_5
[»] chr3 (9 HSPs)
chr3 (1-100)||(53699801-53699900)
chr3 (106-214)||(33281712-33281821)
chr3 (132-218)||(39114956-39115041)
chr3 (128-220)||(32708723-32708816)
chr3 (123-214)||(35989100-35989191)
chr3 (163-214)||(49183719-49183770)
chr3 (182-214)||(23420798-23420830)
chr3 (162-218)||(34306631-34306687)
chr3 (162-214)||(52620831-52620883)
[»] chr4 (3 HSPs)
chr4 (162-220)||(48417600-48417658)
chr4 (125-220)||(42777290-42777384)
chr4 (129-188)||(36151402-36151462)
[»] chr5 (5 HSPs)
chr5 (163-214)||(3676511-3676562)
chr5 (166-218)||(9096346-9096398)
chr5 (128-214)||(19389824-19389910)
chr5 (163-221)||(32125262-32125320)
chr5 (162-218)||(37909024-37909080)
[»] scaffold0036 (1 HSPs)
scaffold0036 (114-218)||(82770-82875)
[»] chr2 (1 HSPs)
chr2 (163-214)||(15803212-15803263)
[»] chr6 (2 HSPs)
chr6 (109-214)||(26713832-26713938)
chr6 (103-143)||(6695269-6695309)
[»] chr7 (4 HSPs)
chr7 (109-218)||(30183817-30183925)
chr7 (128-187)||(23419496-23419556)
chr7 (162-214)||(38137964-38138016)
chr7 (164-214)||(38505340-38505390)
[»] chr8 (5 HSPs)
chr8 (163-214)||(16424171-16424223)
chr8 (119-214)||(31305781-31305876)
chr8 (163-214)||(39778838-39778889)
chr8 (163-214)||(41866123-41866174)
chr8 (163-220)||(6943456-6943513)
[»] scaffold0263 (1 HSPs)
scaffold0263 (163-214)||(12255-12306)
[»] scaffold0002 (1 HSPs)
scaffold0002 (163-214)||(90881-90932)
[»] chr1 (4 HSPs)
chr1 (164-214)||(50587069-50587119)
chr1 (162-219)||(35604257-35604314)
chr1 (162-214)||(28848795-28848847)
chr1 (162-218)||(51246566-51246621)


Alignment Details
Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 53699801 - 53699900
Alignment:
Q  1 ttagctaagtttggagtgaacaaaatatgactctaggctttctttgcgagtatggaaggtgaagggaggactttgaagaaaaggatagagaacttcgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53699801 ttagctaagtttggagtgaacaaaatatgactctaggctttctttgcgaatatggaaggtgaagggaggactttgaagaaaagaatagagaacttcgaga 53699900  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 33281821 - 33281712
Alignment:
Q  106 gattttgaggggtttattatttttcataatataaaatcc-ccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaat 204  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| | || | ||||  ||||||||||||| || |||||||||||  ||| || ||||||    
T  33281821 gattttgagggatttattttttttcataatataaaatcctcctcatttataggaactcaaaaattgtattggaagaggattttgaggggtttaaatgaat 33281722  T
Q  205 tcttcaaatt 214  Q
    ||||||||||    
T  33281721 tcttcaaatt 33281712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 39115041 - 39114956
Alignment:
Q  132 taatataaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaat 218  Q
    ||||||||||||| | |||||||||| | ||  |||||||||| |||||||| |||  | ||| |||||||||||||||||||||||    
T  39115041 taatataaaatcctcctaattttgggga-actcaaattgtattggaggaggactttagagggtttatatgaattcttcaaattcaat 39114956  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 32708723 - 32708816
Alignment:
Q  128 ttcataatataaaatccccttaattttg-ggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaattt 220  Q
    ||||||||| ||||||| | |||||||| ||||| ||||| ||| ||  || |||||||||| ||||| |||||||||||||  ||||||||||    
T  32708723 ttcataatacaaaatcctcataattttgaggaattcaaaatttggatcagatgaggattttggaaggtttatatgaattcttttaattcaattt 32708816  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 35989100 - 35989191
Alignment:
Q  123 tatttttcataatataaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||| |||||||||| ||| || | |||||| |||||   |||||||||||| ||||||  ||||||| | | |||||||||||||||||||    
T  35989100 tattcttcataatattaaaccctcctaatttggggaactaaaaaattgtattagaggagagttttgaaggatttatatgaattcttcaaatt 35989191  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 49183719 - 49183770
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| ||||||| ||||| | ||| |||||||||||||||||||    
T  49183719 aaaaattgtattagaggagggttttggagggtttatatgaattcttcaaatt 49183770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 23420830 - 23420798
Alignment:
Q  182 gattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||||||||||| |||||||||||||||||||    
T  23420830 gattttgaaaggtttatatgaattcttcaaatt 23420798  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 34306631 - 34306687
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaat 218  Q
    ||||||||||||| | ||||| ||||| | ||| |||||||||| ||||||||||||    
T  34306631 caaaaattgtattgggggagggttttggagggtttatatgaatttttcaaattcaat 34306687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 52620883 - 52620831
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||||||||||| ||||||| ||||||  |||  ||||||||||||||||||    
T  52620883 caaaaattgtattggaggagggttttgaggggttaatatgaattcttcaaatt 52620831  T

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Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 48417658 - 48417600
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaattt 220  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  48417658 caaaaattgtattggaggaggattttggagggtctatatgaattcttcaaattcaattt 48417600  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 42777384 - 42777290
Alignment:
Q  125 tttttcataatataaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaattt 220  Q
    |||||||||||| ||||||  | | ||||| | ||  ||||||||||||| ||||| | ||||||||||| || |||||||||||||||| |||||    
T  42777384 tttttcataatacaaaatcttcatcattttagaaactcaaaaattgtattggaggaag-ttttgaaaggtttacatgaattcttcaaatttaattt 42777290  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 36151462 - 36151402
Alignment:
Q  129 tcataatataaaatccccttaattt-tgggaatacaaaaattgtatttgaggaggattttg 188  Q
    |||||||| ||||||||||||||||  |||||  ||||||||||||| | |||||||||||    
T  36151462 tcataataaaaaatccccttaatttgggggaactcaaaaattgtattgggggaggattttg 36151402  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 3676562 - 3676511
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  3676562 aaaaattgtattggaggaggattttgaagggtttatatgaattcttcaaatt 3676511  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 9096346 - 9096398
Alignment:
Q  166 aattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaat 218  Q
    ||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  9096346 aattgtattggaggaggattttggagggtttatatgaattcttcaaattcaat 9096398  T

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Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 19389910 - 19389824
Alignment:
Q  128 ttcataatataaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||||||| ||||||| | | |||| |||||   |||||||||||| ||||||||||||| | ||| || ||||||||||||||||    
T  19389910 ttcataatacaaaatcctcctcatttggggaactaaaaaattgtattggaggaggattttggagggtttacatgaattcttcaaatt 19389824  T

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Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 32125320 - 32125262
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaatttg 221  Q
    |||||||||||| ||||||||||||  | ||| | ||||||||||||||||||||||||    
T  32125320 aaaaattgtattggaggaggattttagagggtttgtatgaattcttcaaattcaatttg 32125262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 37909024 - 37909080
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaat 218  Q
    ||||| ||||||| ||||||| ||||| | ||| |||||||||||||||||||||||    
T  37909024 caaaagttgtattggaggagggttttggagggtttatatgaattcttcaaattcaat 37909080  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 82770 - 82875
Alignment:
Q  114 ggggtttattatttttcataatataaaatccccttaatttt-gggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaa 212  Q
    |||||||||| || ||||||||| ||||||| | ||||||  |||||  | ||||||||||| ||||| ||||||| | ||| |||||||| ||||||||    
T  82770 ggggtttatttttcttcataatacaaaatcctcctaatttgagggaactccaaaattgtattggaggatgattttggagggtttatatgaactcttcaaa 82869  T
Q  213 ttcaat 218  Q
    ||||||    
T  82870 ttcaat 82875  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 15803212 - 15803263
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| ||||||||||||| | ||| |||||||||||||||||||    
T  15803212 aaaaattgtattggaggaggattttggagggtttatatgaattcttcaaatt 15803263  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 26713832 - 26713938
Alignment:
Q  109 tttgaggggtttattatttttcataatat-aaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattct 207  Q
    ||||||||||| ||| || ||||| |||  ||||||| | | |||| |||||  ||||||||||||| ||||||| ||||| | ||| ||||||||||||    
T  26713832 tttgaggggttaatttttcttcatgataagaaaatcctcctcatttggggaactcaaaaattgtattggaggagggttttggagggtttatatgaattct 26713931  T
Q  208 tcaaatt 214  Q
    |||||||    
T  26713932 tcaaatt 26713938  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 6695269 - 6695309
Alignment:
Q  103 gaggattttgaggggtttattatttttcataatataaaatc 143  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  6695269 gaggattttggggggtttattatttttcataatacaaaatc 6695309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 30183817 - 30183925
Alignment:
Q  109 tttgaggggtttattatttttcataatataaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattctt 208  Q
    ||||||||||| ||| || |||| |||| ||||||| | || ||||||| | || |||||||| || ||||||||||||| | | | | |||||||||||    
T  30183817 tttgaggggttcatttttcttcaaaatacaaaatcctcctagttttgggga-actaaaattgttttggaggaggattttggaggctttgtatgaattctt 30183915  T
Q  209 caaattcaat 218  Q
    ||||||||||    
T  30183916 caaattcaat 30183925  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 23419556 - 23419496
Alignment:
Q  128 ttcataatataaaatccccttaattttgggaa-tacaaaaattgtatttgaggaggatttt 187  Q
    ||||||||| | ||||||| |||||| ||||| || |||||||||||||||||||||||||    
T  23419556 ttcataatacacaatccccctaatttggggaactaaaaaaattgtatttgaggaggatttt 23419496  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 38137964 - 38138016
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||| ||||||| ||||||| | ||| |||||||||||||||||||||||||    
T  38137964 caaaatttgtattggaggagggtattggaaggtctatatgaattcttcaaatt 38138016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 38505390 - 38505340
Alignment:
Q  164 aaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||||||||||    
T  38505390 aaaattgtattggaggagggttttggagggtttatatgaattcttcaaatt 38505340  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 16424171 - 16424223
Alignment:
Q  163 aaaaattgtatttgaggaggattttga-aaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| |||||||||||||| | ||| |||||||||||||||||||    
T  16424171 aaaaattgtattagaggaggattttgagagggtttatatgaattcttcaaatt 16424223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 31305876 - 31305781
Alignment:
Q  119 ttattatttttcataatataaaatccccttaattttgggaatacaaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||| || |||| ||| ||||| || |||||||| |||||   || ||||||||| ||| ||||||||| | ||| |||||||||||||||||||    
T  31305876 ttatttttcttcaaaatgtaaaaccctcttaatttggggaacgaaacaattgtattggagaaggattttggagggtttatatgaattcttcaaatt 31305781  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 39778838 - 39778889
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| |||||| |||||| | ||| |||||||||||||||||||    
T  39778838 aaaaattgtattggaggagaattttggatggtttatatgaattcttcaaatt 39778889  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 41866174 - 41866123
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| ||||||| ||||||| ||| ||||| |||||||||||||    
T  41866174 aaaaattgtattggaggagggttttgaagggtttatataaattcttcaaatt 41866123  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 6943513 - 6943456
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaattt 220  Q
    |||||||||||| ||||||| ||||| | |||  |||||||||||||||||| |||||    
T  6943513 aaaaattgtattggaggagggttttggagggttaatatgaattcttcaaatttaattt 6943456  T

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Target: scaffold0263 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 12306 - 12255
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| ||||||| ||||| | ||| |||||||||||||||||||    
T  12306 aaaaattgtattggaggaggtttttggatggtttatatgaattcttcaaatt 12255  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 90932 - 90881
Alignment:
Q  163 aaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    |||||||||||| ||||||| ||||| | ||| |||||||||||||||||||    
T  90932 aaaaattgtattggaggagggttttggatggtttatatgaattcttcaaatt 90881  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 50587069 - 50587119
Alignment:
Q  164 aaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||||| ||| ||||||| ||||||| ||| |||||||||||||||||||    
T  50587069 aaaattgcattggaggagggttttgaagggtttatatgaattcttcaaatt 50587119  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 35604314 - 35604257
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaatt 219  Q
    |||||||||||||  |||| ||||||||| ||| |||||||||| |||||||| ||||    
T  35604314 caaaaattgtattaaaggacgattttgaagggtttatatgaatttttcaaattaaatt 35604257  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 28848847 - 28848795
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaatt 214  Q
    ||||||||||||| ||||||| ||||| | ||| || ||||||||||||||||    
T  28848847 caaaaattgtattggaggagggttttggatggtttacatgaattcttcaaatt 28848795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 51246621 - 51246566
Alignment:
Q  162 caaaaattgtatttgaggaggattttgaaaggtctatatgaattcttcaaattcaat 218  Q
    ||||||||||||| ||||||| ||||| | ||| |||||||||| ||||||||||||    
T  51246621 caaaaattgtattggaggagggttttg-agggtttatatgaatttttcaaattcaat 51246566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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