View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4410_low_35 (Length: 238)
Name: NF4410_low_35
Description: NF4410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4410_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2302909 - 2303129
Alignment:
| Q |
1 |
taaattgtggagtttcttcaatgccactactctaccactaggtagatttgctttataaacactaccatagccaccaactcctatgcaatatttgatgtca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
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| T |
2302909 |
taaattgtggagtttcttcaatgccactactctaccactaggtagatttgctttataaacactaccataaccaccaacgcctatgcaatatttgatgtca |
2303008 |
T |
|
| Q |
101 |
aaattctctgttgcttcaattatatcttcataagcaattttaccatcatagttccatattgnnnnnnngtcaccattcttcgtagtttgtgttcttgaaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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|
| T |
2303009 |
aaattctctgttgcttcaattatatcttcataagcaattttaccatcatagttccatattgaaaaaaagtcaccattcttcgtagtttgtgttcttgaaa |
2303108 |
T |
|
| Q |
201 |
tgaaactacaagccttacacc |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
2303109 |
tgaaactacaagccttacacc |
2303129 |
T |
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