View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4416-Insertion-4 (Length: 235)
Name: NF4416-Insertion-4
Description: NF4416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4416-Insertion-4 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 22476424 - 22476213
Alignment:
| Q |
8 |
aattcactaacaggtattgaatctttcattattcagtttcatcaatcgacaattttttctgcaatttgtatattattcctcaaaatatttgtaaatttgt |
107 |
Q |
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|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22476424 |
aattcactaacaggtattgaatttgtcattattcagtttcatcaatcgacaattttttctgcaatttgtatattattcctcaaaatatttgtaaatttgt |
22476325 |
T |
|
| Q |
108 |
caactttaatgctttctacaattataatttttcttcctgatctacatctcaaatactactacttccttatttttgttctccaaagtcatcttttttcatc |
207 |
Q |
| |
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|| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22476324 |
catctttaatgctttctacaattataatatgtcttcctgatctacatctcaaatactactacttccttatttttgttctccaaagtcatcttttttcatc |
22476225 |
T |
|
| Q |
208 |
tctatttttatt |
219 |
Q |
| |
|
|||||||||||| |
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|
| T |
22476224 |
tctatttttatt |
22476213 |
T |
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