View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4416-Insertion-9 (Length: 108)

Name: NF4416-Insertion-9
Description: NF4416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4416-Insertion-9
NF4416-Insertion-9
[»] chr4 (38 HSPs)
chr4 (20-108)||(19282523-19282611)
chr4 (20-64)||(29840070-29840114)
chr4 (20-64)||(56556366-56556410)
chr4 (20-103)||(24259567-24259650)
chr4 (20-57)||(31987306-31987343)
chr4 (20-64)||(6462004-6462048)
chr4 (20-64)||(15501258-15501302)
chr4 (20-64)||(21045151-21045195)
chr4 (20-64)||(32141075-32141119)
chr4 (20-64)||(50072276-50072320)
chr4 (20-64)||(52732594-52732638)
chr4 (22-64)||(31817289-31817331)
chr4 (20-61)||(11835105-11835146)
chr4 (20-61)||(28116243-28116284)
chr4 (20-61)||(45903518-45903559)
chr4 (20-103)||(51434370-51434451)
chr4 (20-64)||(1868211-1868255)
chr4 (20-64)||(6231652-6231696)
chr4 (20-64)||(30022063-30022107)
chr4 (20-64)||(31941553-31941597)
chr4 (20-64)||(34096010-34096054)
chr4 (20-64)||(37445655-37445699)
chr4 (20-64)||(39671194-39671238)
chr4 (20-64)||(43421228-43421272)
chr4 (20-64)||(44855237-44855281)
chr4 (20-64)||(47321139-47321183)
chr4 (20-64)||(51930595-51930639)
chr4 (20-63)||(17317956-17317999)
chr4 (20-57)||(45520570-45520607)
chr4 (20-64)||(6232147-6232191)
chr4 (20-64)||(6510113-6510157)
chr4 (20-64)||(17499830-17499874)
chr4 (20-64)||(19849079-19849123)
chr4 (20-64)||(22212336-22212380)
chr4 (20-64)||(35928486-35928530)
chr4 (20-64)||(54091953-54091997)
chr4 (76-108)||(56556196-56556228)
chr4 (20-55)||(30492732-30492767)
[»] chr8 (30 HSPs)
chr8 (20-108)||(14541856-14541943)
chr8 (20-64)||(22601134-22601178)
chr8 (20-60)||(41790228-41790268)
chr8 (20-62)||(34461695-34461737)
chr8 (20-64)||(11257540-11257584)
chr8 (20-64)||(27109931-27109975)
chr8 (21-61)||(27416502-27416542)
chr8 (20-64)||(36915365-36915409)
chr8 (20-61)||(16208951-16208992)
chr8 (20-64)||(156239-156283)
chr8 (20-64)||(8471279-8471323)
chr8 (20-64)||(9022393-9022437)
chr8 (21-61)||(18666632-18666672)
chr8 (20-64)||(42946120-42946164)
chr8 (20-59)||(34168316-34168355)
chr8 (25-64)||(39970323-39970362)
chr8 (20-61)||(7129302-7129343)
chr8 (20-57)||(8382588-8382625)
chr8 (35-64)||(11335840-11335869)
chr8 (20-64)||(1774170-1774214)
chr8 (20-64)||(2803348-2803392)
chr8 (20-64)||(5588584-5588628)
chr8 (20-64)||(7612496-7612540)
chr8 (20-64)||(29931342-29931386)
chr8 (20-64)||(35052469-35052513)
chr8 (20-64)||(38329140-38329184)
chr8 (20-64)||(45187395-45187439)
chr8 (21-64)||(3203325-3203368)
chr8 (81-108)||(7129493-7129520)
chr8 (20-59)||(32326836-32326875)
[»] chr1 (36 HSPs)
chr1 (20-63)||(1430623-1430666)
chr1 (20-64)||(38132278-38132322)
chr1 (20-64)||(48259964-48260008)
chr1 (23-64)||(26252116-26252157)
chr1 (20-64)||(84604-84648)
chr1 (23-63)||(1428865-1428905)
chr1 (20-64)||(11650056-11650100)
chr1 (20-64)||(12851739-12851783)
chr1 (20-64)||(22664937-22664981)
chr1 (20-64)||(24041111-24041155)
chr1 (21-61)||(45377261-45377301)
chr1 (20-61)||(17919930-17919971)
chr1 (20-61)||(40061007-40061048)
chr1 (20-61)||(44582890-44582931)
chr1 (20-61)||(50158417-50158458)
chr1 (20-64)||(255024-255068)
chr1 (20-64)||(5317687-5317731)
chr1 (20-64)||(6332164-6332208)
chr1 (20-64)||(9552440-9552484)
chr1 (20-64)||(12002244-12002288)
chr1 (20-64)||(15698861-15698905)
chr1 (20-64)||(44583770-44583814)
chr1 (20-63)||(11134571-11134614)
chr1 (20-64)||(50349966-50350012)
chr1 (26-64)||(15647177-15647215)
chr1 (78-108)||(28200136-28200166)
chr1 (20-62)||(42650360-42650402)
chr1 (20-57)||(40719020-40719057)
chr1 (20-61)||(43755054-43755095)
chr1 (20-61)||(49894807-49894848)
chr1 (20-64)||(2459006-2459050)
chr1 (20-64)||(9333105-9333149)
chr1 (20-64)||(9356878-9356922)
chr1 (20-64)||(17806485-17806529)
chr1 (20-64)||(26582923-26582967)
chr1 (76-108)||(45749413-45749445)
[»] chr7 (28 HSPs)
chr7 (20-61)||(19288458-19288499)
chr7 (20-64)||(32275203-32275247)
chr7 (20-64)||(1103483-1103527)
chr7 (20-64)||(18733452-18733496)
chr7 (20-64)||(22597229-22597273)
chr7 (20-64)||(30514972-30515016)
chr7 (20-64)||(40298846-40298890)
chr7 (20-64)||(41906044-41906088)
chr7 (20-64)||(42121549-42121593)
chr7 (22-64)||(19906413-19906455)
chr7 (20-58)||(22627457-22627495)
chr7 (20-57)||(19920382-19920419)
chr7 (20-64)||(3681033-3681077)
chr7 (20-60)||(5723006-5723046)
chr7 (20-64)||(17869236-17869280)
chr7 (20-64)||(28044242-28044286)
chr7 (20-64)||(36836058-36836102)
chr7 (20-64)||(43813455-43813499)
chr7 (76-107)||(16564716-16564747)
chr7 (76-107)||(16600915-16600946)
chr7 (78-108)||(30833259-30833289)
chr7 (20-61)||(42044090-42044131)
chr7 (20-64)||(18886668-18886712)
chr7 (20-64)||(31416862-31416906)
chr7 (20-64)||(32345946-32345990)
chr7 (20-64)||(32873274-32873318)
chr7 (20-64)||(36447181-36447225)
chr7 (20-60)||(40207488-40207528)
[»] chr2 (22 HSPs)
chr2 (20-61)||(1298890-1298931)
chr2 (20-64)||(4536572-4536616)
chr2 (20-64)||(29795300-29795344)
chr2 (20-64)||(1360175-1360219)
chr2 (20-64)||(4840837-4840881)
chr2 (20-64)||(33093366-33093410)
chr2 (20-64)||(34225771-34225815)
chr2 (20-62)||(7743401-7743443)
chr2 (20-63)||(4766298-4766341)
chr2 (20-57)||(14378334-14378371)
chr2 (20-61)||(16316710-16316751)
chr2 (23-64)||(45372645-45372686)
chr2 (20-64)||(775995-776039)
chr2 (20-64)||(2459771-2459815)
chr2 (20-64)||(6591963-6592007)
chr2 (20-64)||(10580968-10581012)
chr2 (20-64)||(14698010-14698054)
chr2 (20-64)||(18374874-18374918)
chr2 (20-64)||(43344331-43344375)
chr2 (20-64)||(43388767-43388811)
chr2 (20-64)||(45148062-45148106)
chr2 (20-63)||(14511459-14511502)
[»] chr6 (23 HSPs)
chr6 (20-64)||(4123965-4124009)
chr6 (20-64)||(29915539-29915583)
chr6 (20-64)||(29927205-29927249)
chr6 (20-64)||(31275752-31275796)
chr6 (20-64)||(4132085-4132129)
chr6 (20-64)||(8052343-8052387)
chr6 (20-64)||(12828791-12828835)
chr6 (20-64)||(17345246-17345290)
chr6 (20-64)||(32258720-32258764)
chr6 (21-64)||(19689945-19689988)
chr6 (22-64)||(34439525-34439567)
chr6 (20-64)||(11785212-11785255)
chr6 (20-59)||(3015919-3015958)
chr6 (33-64)||(19416857-19416888)
chr6 (20-59)||(26669208-26669247)
chr6 (78-108)||(29713320-29713350)
chr6 (20-64)||(1924774-1924818)
chr6 (20-64)||(6140598-6140642)
chr6 (20-64)||(6143082-6143126)
chr6 (20-64)||(10494872-10494916)
chr6 (76-108)||(26669260-26669292)
chr6 (20-64)||(30627089-30627133)
chr6 (20-64)||(34576542-34576586)
[»] chr5 (31 HSPs)
chr5 (20-64)||(166759-166803)
chr5 (20-64)||(793716-793760)
chr5 (20-64)||(4742377-4742421)
chr5 (20-64)||(4751641-4751685)
chr5 (20-64)||(12992063-12992107)
chr5 (20-64)||(14980149-14980193)
chr5 (20-64)||(42329656-42329700)
chr5 (20-61)||(32690841-32690882)
chr5 (20-64)||(4371362-4371406)
chr5 (20-64)||(13066712-13066756)
chr5 (20-64)||(27658682-27658726)
chr5 (20-64)||(27810345-27810389)
chr5 (20-64)||(31889741-31889785)
chr5 (20-64)||(34919752-34919796)
chr5 (20-64)||(36660426-36660470)
chr5 (20-57)||(15400177-15400214)
chr5 (20-57)||(29051622-29051659)
chr5 (20-64)||(29653624-29653668)
chr5 (20-64)||(31557445-31557489)
chr5 (20-60)||(33822613-33822653)
chr5 (20-64)||(34171163-34171207)
chr5 (20-64)||(38982255-38982299)
chr5 (21-64)||(32963118-32963161)
chr5 (35-64)||(24436585-24436614)
chr5 (20-61)||(41845392-41845433)
chr5 (20-57)||(43257961-43257998)
chr5 (20-64)||(4011746-4011790)
chr5 (20-64)||(17674207-17674251)
chr5 (20-64)||(33585085-33585129)
chr5 (20-64)||(39059805-39059849)
chr5 (21-64)||(12167693-12167736)
[»] chr3 (44 HSPs)
chr3 (20-64)||(37225705-37225749)
chr3 (20-108)||(27483294-27483379)
chr3 (20-59)||(35239390-35239429)
chr3 (20-64)||(790095-790139)
chr3 (20-64)||(13485915-13485959)
chr3 (20-64)||(26965609-26965653)
chr3 (20-64)||(43169333-43169377)
chr3 (20-64)||(46363121-46363165)
chr3 (20-64)||(54933315-54933359)
chr3 (21-64)||(44648512-44648555)
chr3 (26-64)||(2988725-2988763)
chr3 (20-61)||(22414757-22414798)
chr3 (20-61)||(25722571-25722612)
chr3 (20-57)||(31291074-31291111)
chr3 (20-64)||(83295-83339)
chr3 (20-64)||(19552539-19552583)
chr3 (20-64)||(25061703-25061747)
chr3 (20-64)||(36771677-36771721)
chr3 (20-64)||(43580474-43580518)
chr3 (20-64)||(43687996-43688040)
chr3 (20-64)||(51381720-51381764)
chr3 (21-64)||(36310361-36310404)
chr3 (20-63)||(53716029-53716072)
chr3 (78-108)||(36461014-36461044)
chr3 (20-57)||(1341030-1341067)
chr3 (20-57)||(41287082-41287119)
chr3 (20-57)||(45095559-45095596)
chr3 (20-64)||(2568113-2568157)
chr3 (20-64)||(3000751-3000795)
chr3 (20-64)||(5244585-5244629)
chr3 (20-56)||(15514836-15514872)
chr3 (20-64)||(20512607-20512651)
chr3 (20-64)||(22730924-22730968)
chr3 (20-64)||(27027732-27027776)
chr3 (20-56)||(32304015-32304051)
chr3 (20-64)||(34059875-34059919)
chr3 (76-108)||(42939925-42939957)
chr3 (20-64)||(43599931-43599975)
chr3 (20-64)||(44854314-44854358)
chr3 (20-64)||(49470788-49470832)
chr3 (20-64)||(50420258-50420302)
chr3 (76-108)||(50646272-50646304)
chr3 (20-51)||(38165752-38165783)
chr3 (20-63)||(38457460-38457503)
[»] scaffold0194 (1 HSPs)
scaffold0194 (20-64)||(8156-8200)
[»] scaffold0047 (2 HSPs)
scaffold0047 (20-64)||(70565-70609)
scaffold0047 (76-108)||(70367-70399)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-64)||(321724-321768)
[»] scaffold0119 (2 HSPs)
scaffold0119 (20-59)||(1546-1585)
scaffold0119 (76-108)||(1501-1533)
[»] scaffold0519 (1 HSPs)
scaffold0519 (22-64)||(7811-7852)
[»] scaffold0886 (1 HSPs)
scaffold0886 (20-64)||(4219-4263)
[»] scaffold0580 (2 HSPs)
scaffold0580 (20-61)||(1642-1685)
scaffold0580 (20-61)||(9381-9424)
[»] scaffold0189 (1 HSPs)
scaffold0189 (20-64)||(13169-13213)


Alignment Details
Target: chr4 (Bit Score: 52; Significance: 2e-21; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 19282523 - 19282611
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaannnnnnnnnnngttaaagcgacactcattttaaaacggaaggag 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  19282523 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaatttttttttttgttaaagcgacactcattttaaaacggaaggag 19282611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29840114 - 29840070
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  29840114 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29840070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 56556366 - 56556410
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  56556366 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 24259650 - 24259567
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaannnnnnnnnnngttaaagcgacactcattttaaaacgga 103  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||           | ||||||||||||||||||||||||||    
T  24259650 ttaaagttgcattggaaatgtaaagtgacattcattttgaaacaattttttttttggataaagcgacactcattttaaaacgga 24259567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 31987343 - 31987306
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31987343 ttaaagttgtattagaaatgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6462048 - 6462004
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  6462048 ttaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15501258 - 15501302
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  15501258 ttaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 21045195 - 21045151
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  21045195 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 21045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32141075 - 32141119
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  32141075 ttaaagttgtattggaaatgtaaagtggcattcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 50072320 - 50072276
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  50072320 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 50072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 52732638 - 52732594
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  52732638 ttaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 52732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 31817289 - 31817331
Alignment:
Q  22 aaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  31817289 aaagttgcattggaaatgtaaagtgacattcattttgaaacaa 31817331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 11835146 - 11835105
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  11835146 ttaaagttatattaaaaatgtaaagtgacattcattttgaaa 11835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 28116284 - 28116243
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  28116284 ttaaagttgtattggaaatgtaaagtgacatttattttgaaa 28116243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 45903518 - 45903559
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  45903518 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaa 45903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 51434370 - 51434451
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaannnnnnnnnnngttaaagcgacactcattttaaaacgga 103  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||           ||||||||||||||||||||||||||||    
T  51434370 ttaaagttgcattagaaatgtaaagcgacattcattttaaaacaa--tttttttttgttaaagcgacactcattttaaaacgga 51434451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 1868211 - 1868255
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||    
T  1868211 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6231696 - 6231652
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||| || |||| |||||||||||||||||||||||||    
T  6231696 ttaaagttgtactataaatataaagtgacattcattttgaaacaa 6231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 30022107 - 30022063
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||    
T  30022107 ttaaagttgtattggaaatgtcaagtaacattcattttgaaacaa 30022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 31941597 - 31941553
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  31941597 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34096054 - 34096010
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||    
T  34096054 ttaaaattgtattagaaatgtaaattgacattcgttttgaaacaa 34096010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 37445699 - 37445655
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||    
T  37445699 ttaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 39671194 - 39671238
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||    
T  39671194 ttaaagttgtattggaaatgtaaaacgacattcattttgaaacaa 39671238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43421228 - 43421272
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||    
T  43421228 ttaaagttgtatgggaaatgtaaagtgaccttcattttgaaacaa 43421272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 44855281 - 44855237
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||    
T  44855281 ttaaagttgtattggaaatgtaaagtgacatttatttcgaaacaa 44855237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 47321183 - 47321139
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  47321183 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 47321139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 51930639 - 51930595
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||    
T  51930639 ttaaaattgtattggaaatgtaaagcgacattcattttgaaacaa 51930595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 17317956 - 17317999
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  17317956 ttaaagttgtattggaaatgtaatgtgacattcagtttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 45520570 - 45520607
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||  |||||||||||||||||||||||    
T  45520570 ttaaagttgtattgaaaatgtaaagtgacattcatttt 45520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 6232147 - 6232191
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||| ||||||||||||    
T  6232147 ttaaagttgtattgaaaatgtaaattgacatttattttgaaacaa 6232191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6510157 - 6510113
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||    
T  6510157 ttaaagttgtattgaaaatataaagtgacatttattttgaaacaa 6510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 17499830 - 17499874
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  17499830 ttaaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19849123 - 19849079
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  19849123 ttaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22212380 - 22212336
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||| ||||||||| |||||||||||||| ||||||    
T  22212380 ttaaagttatattggaaatgtaaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 35928530 - 35928486
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||| ||| ||||||||||||    
T  35928530 ttaaagttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 54091997 - 54091953
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| |||| |||| ||||||||||||| ||||||    
T  54091997 ttaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 56556228 - 56556196
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||| ||||    
T  56556228 gttaaagcgacactcattttaaaacggagggag 56556196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 30492767 - 30492732
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatt 55  Q
    |||||||||||||  |||||||||||||||||||||    
T  30492767 ttaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-18; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 14541856 - 14541943
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaannnnnnnnnnngttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||||||||||||||||||||||    
T  14541856 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa-ttttttttttgctaaagcgacactcattttaaaacggaaggag 14541943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22601178 - 22601134
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  22601178 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 22601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 41790228 - 41790268
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41790228 ttaaagttgtattagaaatgtaaagtgacattcattttgaa 41790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 34461695 - 34461737
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaac 62  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  34461695 ttaaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11257584 - 11257540
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  11257584 ttaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 27109931 - 27109975
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  27109931 ttaaagttgtattggaaatggaaagtgacattcattttgaaacaa 27109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 27416542 - 27416502
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  27416542 taaagttgtattggaaatgtaaagtgacattcattttgaaa 27416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 36915409 - 36915365
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  36915409 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16208992 - 16208951
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  16208992 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaa 16208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 156283 - 156239
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||| | |||||||||||||||||||||||||||||    
T  156283 ttaaagttatattgggaatgtaaagtgacattcattttgaaacaa 156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 8471323 - 8471279
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||    
T  8471323 ttaaagttgcattggaaatgtaaagcgacattcattttgaaacaa 8471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9022437 - 9022393
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||    
T  9022437 ttaaagttgtattggaaacgtaaagtgacattcattttaaaacaa 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 18666632 - 18666672
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  18666632 taaagttgcattggaaatgtaaagtgacattcattttgaaa 18666672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 42946164 - 42946120
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||    
T  42946164 ttaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 34168316 - 34168355
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttga 59  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  34168316 ttaaagttgtattgaaaatgtaaagtgacattcattttga 34168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 39970362 - 39970323
Alignment:
Q  25 gttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  39970362 gttgtattggaaatgtaaagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 7129343 - 7129302
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||| |||  |||||||||||||||||||||||||||    
T  7129343 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaa 7129302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 8382588 - 8382625
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||  |||||||||||||||||||||||    
T  8382588 ttaaagttgtattgaaaatgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 11335869 - 11335840
Alignment:
Q  35 aaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||||||||||||||    
T  11335869 aaatgtaaagtgacattcattttgaaacaa 11335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 1774170 - 1774214
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||||||||| ||||||    
T  1774170 ttaaagttgtattgaaaatgtaaattgacattcattttaaaacaa 1774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 2803348 - 2803392
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||    
T  2803348 ttaaaattgtattgaaaatgtaaagtgacatttattttgaaacaa 2803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5588584 - 5588628
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  5588584 ttaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 7612540 - 7612496
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||| ||||||||  ||||||||||||||||||||||| ||||||    
T  7612540 ttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 29931342 - 29931386
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  29931342 ttaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 35052513 - 35052469
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||    
T  35052513 ttaaagttgtattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 38329140 - 38329184
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||| |||||||||||||||||| ||||||    
T  38329140 ttaaagttgtattgaaaatataaagtgacattcattttaaaacaa 38329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 45187395 - 45187439
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||    
T  45187395 ttaaagttgtattgaaaatataaagtgacatttattttgaaacaa 45187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 3203368 - 3203325
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||  ||||||||||||||||| ||||||||||||    
T  3203368 taaagttgcattgaaaatgtaaagtgacatttattttgaaacaa 3203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 108
Target Start/End: Original strand, 7129493 - 7129520
Alignment:
Q  81 agcgacactcattttaaaacggaaggag 108  Q
    ||||||||||||||||||||||||||||    
T  7129493 agcgacactcattttaaaacggaaggag 7129520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 32326836 - 32326875
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttga 59  Q
    |||||||||||||  ||||||||||||||||| |||||||    
T  32326836 ttaaagttgtattgaaaatgtaaagtgacatttattttga 32326875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 1e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 1430623 - 1430666
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1430623 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 1430666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 38132278 - 38132322
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  38132278 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 48259964 - 48260008
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  48259964 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 26252157 - 26252116
Alignment:
Q  23 aagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  26252157 aagttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 84604 - 84648
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  84604 ttaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 84648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 1428905 - 1428865
Alignment:
Q  23 aagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  1428905 aagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11650100 - 11650056
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  11650100 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 12851783 - 12851739
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  12851783 ttaaagttctattggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22664981 - 22664937
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  22664981 ttaacgttgtattggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24041111 - 24041155
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  24041111 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 45377261 - 45377301
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  45377261 taaagttgtattggaaatgtaaagtgacattcattttgaaa 45377301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 17919930 - 17919971
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||| |||||||||||||| |||||||||||||    
T  17919930 ttaaagttgtattggaaatgtaaagtgatattcattttgaaa 17919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 40061007 - 40061048
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  40061007 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaa 40061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 44582890 - 44582931
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  44582890 ttaaagttgtattggaaatgtaaagtgacatttattttgaaa 44582931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 50158417 - 50158458
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  50158417 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaa 50158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 255024 - 255068
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||    
T  255024 ttaaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5317687 - 5317731
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  || |||||||||||||||||||||||||||    
T  5317687 ttaaagttgtattgaaattgtaaagtgacattcattttgaaacaa 5317731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6332208 - 6332164
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||    
T  6332208 ttaaagttgtgttaaaaatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9552440 - 9552484
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||    
T  9552440 ttaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 12002288 - 12002244
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||    
T  12002288 ttaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15698861 - 15698905
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  15698861 ttaaagttgtattggaaatataaagtgacattcattttaaaacaa 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 44583814 - 44583770
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||    
T  44583814 ttaaagttgtattaaaaatgtaaggtgacattcattttaaaacaa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 11134571 - 11134614
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    ||||||||| |||  |||||||||||||||||||||||||||||    
T  11134571 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 50349966 - 50350012
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgac--attcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||    
T  50349966 ttaaagttgtattggaaatgtaaagtgacatattcattttgaaacaa 50350012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 15647177 - 15647215
Alignment:
Q  26 ttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  15647177 ttgtattgaaaatgtaaagtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 28200166 - 28200136
Alignment:
Q  78 taaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||||||    
T  28200166 taaagcgacactcattttaaaacggaaggag 28200136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 42650360 - 42650402
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaac 62  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||    
T  42650360 ttaaagttgtattagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 40719057 - 40719020
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  40719057 ttaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 43755095 - 43755054
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  |||||||||||||| ||||||||||||    
T  43755095 ttaaagttgtattgaaaatgtaaagtgacgttcattttgaaa 43755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 49894848 - 49894807
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||| |||||||||| | |||||||||||||||    
T  49894848 ttaaagttgtattggaaatgtaaaataacattcattttgaaa 49894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2459050 - 2459006
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  |||||||||| |||||||||||||||||||    
T  2459050 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 2459006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9333149 - 9333105
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||||||||||||||| ||||| ||||| ||||||    
T  9333149 ttaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9356922 - 9356878
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||||||||||||||| ||||| ||||| ||||||    
T  9356922 ttaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 17806485 - 17806529
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||| |||| ||||||| ||||||    
T  17806485 ttaaagttgtattggaaatgtaaagcgacactcattttaaaacaa 17806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 26582967 - 26582923
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||| ||||| ||||| ||||||    
T  26582967 ttaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 45749445 - 45749413
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||| ||||    
T  45749445 gttaaagcgacactcattttaaaacggatggag 45749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 19288458 - 19288499
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19288458 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 19288499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 32275247 - 32275203
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  32275247 ttaaagttgtattagaaatgtaaagtggcattcattttgaaacaa 32275203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1103527 - 1103483
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  1103527 ttaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 1103483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18733496 - 18733452
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  18733496 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22597273 - 22597229
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  22597273 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 22597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 30515016 - 30514972
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  30515016 ttaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 40298890 - 40298846
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  40298890 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 40298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 41906044 - 41906088
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  41906044 ttaaagttgtattagaaatgtaaagtgacatttattttaaaacaa 41906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 42121593 - 42121549
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  42121593 ttaaagttgtattggaaatataaagtgacattcattttgaaacaa 42121549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 19906455 - 19906413
Alignment:
Q  22 aaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  19906455 aaagttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 22627457 - 22627495
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttg 58  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  22627457 ttaaagttgtattggaaatgtaaagtgacattcattttg 22627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 19920382 - 19920419
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19920382 ttaaagttgtattggaaatgtaaagtgacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 3681033 - 3681077
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  3681033 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5723046 - 5723006
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaa 60  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  5723046 ttaaagttgtattgaaaatgtaaagtgacattcattttgaa 5723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 17869280 - 17869236
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  17869280 ttaaagttgcattggaaatgtaaaatgacattcattttgaaacaa 17869236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 28044242 - 28044286
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  28044242 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 28044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 36836102 - 36836058
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||||||||| |||||||||||||||||||    
T  36836102 ttaaagttgtattgaaaatgtaaagcgacattcattttgaaacaa 36836058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43813455 - 43813499
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  43813455 ttaaagttgtattggaaatataaagtgacattcattttaaaacaa 43813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 107
Target Start/End: Complemental strand, 16564747 - 16564716
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaagga 107  Q
    ||||||||||||||||||||||||||||||||    
T  16564747 gttaaagcgacactcattttaaaacggaagga 16564716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 107
Target Start/End: Original strand, 16600915 - 16600946
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaagga 107  Q
    ||||||||||||||||||||||||||||||||    
T  16600915 gttaaagcgacactcattttaaaacggaagga 16600946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 30833259 - 30833289
Alignment:
Q  78 taaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||||||    
T  30833259 taaagcgacactcattttaaaacggaaggag 30833289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 42044090 - 42044131
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  42044090 ttaaagttgtattgaaaatgtaaagtgacattaattttgaaa 42044131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18886712 - 18886668
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||    
T  18886712 ttaaagttgtattgaaaatgtaaagtgagattcattttaaaacaa 18886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 31416862 - 31416906
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||    
T  31416862 ttaaagttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32345946 - 32345990
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  |||||||||| |||||||||||||||||||    
T  32345946 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 32345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32873274 - 32873318
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  32873274 ttaaaattgtattggaaatataaagtgacattcattttaaaacaa 32873318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 36447181 - 36447225
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||  ||||||||| ||||||||||||||||||||    
T  36447181 ttaaaattgtattgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 40207488 - 40207528
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaa 60  Q
    |||||||||||||| |||| |||| ||||||||||||||||    
T  40207488 ttaaagttgtattaaaaatataaaatgacattcattttgaa 40207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1298890 - 1298931
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1298890 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 4536616 - 4536572
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  4536616 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 4536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 29795300 - 29795344
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  29795300 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1360219 - 1360175
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  1360219 ttaaagttgtattggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4840837 - 4840881
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||    
T  4840837 ttaaagttgtattggaaatgtaaagtgacattcattttggaacaa 4840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 33093410 - 33093366
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  33093410 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 33093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34225815 - 34225771
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  34225815 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 7743443 - 7743401
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaac 62  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  7743443 ttaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 4766298 - 4766341
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    |||||||||||||  ||||||||| |||||||||||||||||||    
T  4766298 ttaaagttgtattgaaaatgtaaattgacattcattttgaaaca 4766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14378334 - 14378371
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||  |||||||||||||||||||||||    
T  14378334 ttaaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16316751 - 16316710
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||| ||||| |||||||||||||| |||||||    
T  16316751 ttaaagttgtattggaaatataaagtgacattcaatttgaaa 16316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 45372645 - 45372686
Alignment:
Q  23 aagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||  ||||||||||||||||||||||| ||||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 775995 - 776039
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  |||||||||| |||||||||||||||||||    
T  775995 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2459815 - 2459771
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  2459815 ttaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6592007 - 6591963
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  6592007 ttaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10580968 - 10581012
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||| |||||||| ||||||||||||||||    
T  10580968 ttaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14698054 - 14698010
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  |||||||||| |||||||||||||||||||    
T  14698054 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18374874 - 18374918
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| || |||| |||||||||||||||||||||||| ||||||    
T  18374874 ttaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43344331 - 43344375
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||| ||| |||||||||||||||||||||    
T  43344331 ttaaagttgtattgaaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43388767 - 43388811
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  |||||||||| |||||||||||||||||||    
T  43388767 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 43388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 45148062 - 45148106
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| ||||  ||||||||||||||||||||||| ||||||    
T  45148062 ttaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 14511502 - 14511459
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    |||| ||||||||  |||||||||| ||||||||||||||||||    
T  14511502 ttaatgttgtattcaaaatgtaaagagacattcattttgaaaca 14511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4123965 - 4124009
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  4123965 ttaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29915583 - 29915539
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  29915583 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29927249 - 29927205
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  29927249 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 31275752 - 31275796
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  31275752 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4132085 - 4132129
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  4132085 ttaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 8052387 - 8052343
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  8052387 ttaaagttgtattagaaatataaagtgacattcattttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 12828791 - 12828835
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  12828791 ttaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 17345246 - 17345290
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  17345246 ttaaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 32258764 - 32258720
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  32258764 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 32258720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 19689945 - 19689988
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||    
T  19689945 taaagttgtattagaaatgtaaagtaacattcattttaaaacaa 19689988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 34439525 - 34439567
Alignment:
Q  22 aaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  34439525 aaagttgtattggaaatgtaaaatgacattcattttgaaacaa 34439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 11785212 - 11785255
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  11785212 ttaaagttgtattggaaatgtaaagtgaca-tcattttgaaacaa 11785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 3015958 - 3015919
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttga 59  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  3015958 ttaaagttgtattgaaaatgtaaagtgacattcattttga 3015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 19416888 - 19416857
Alignment:
Q  33 agaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||||||||||||||||    
T  19416888 agaaatgtaaagtgacattcattttgaaacaa 19416857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 26669208 - 26669247
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttga 59  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  26669208 ttaaagttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 29713350 - 29713320
Alignment:
Q  78 taaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||||||    
T  29713350 taaagcgacactcattttaaaacggaaggag 29713320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 1924774 - 1924818
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||||||||| ||||||    
T  1924774 ttaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 1924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6140642 - 6140598
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  6140642 ttaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6143126 - 6143082
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  6143126 ttaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10494872 - 10494916
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  10494872 ttaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 26669260 - 26669292
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||| ||||    
T  26669260 gttaaagcgacactcattttaaaacggatggag 26669292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 30627133 - 30627089
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||    
T  30627133 ttaaagttgtattgaaaatataaagtgacatttattttgaaacaa 30627089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34576586 - 34576542
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  34576586 ttaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 166759 - 166803
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  166759 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 793716 - 793760
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  793716 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4742377 - 4742421
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  4742377 ttaaagttgtattagaaatataaagtgacattcattttgaaacaa 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4751641 - 4751685
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  4751641 ttaaagttgtattagaaatataaagtgacattcattttgaaacaa 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 12992107 - 12992063
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  12992107 ttaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 14980149 - 14980193
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  14980149 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 14980193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 42329656 - 42329700
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  42329656 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 32690841 - 32690882
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  32690841 ttaaagttgtatttgaaatgtaaagtgacattcattttgaaa 32690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 4371406 - 4371362
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  4371406 ttaaagttgtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 13066756 - 13066712
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  13066756 ttaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 27810389 - 27810345
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  27810389 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 31889785 - 31889741
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  31889785 ttaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34919796 - 34919752
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| |||||| |||||||||||||||||||||||||||||    
T  34919796 ttaaagttatattaggaatgtaaagtgacattcattttgaaacaa 34919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 36660470 - 36660426
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  36660470 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 15400214 - 15400177
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15400214 ttaaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 29051622 - 29051659
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29051622 ttaaagttgtattagaaaggtaaagtgacattcatttt 29051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 29653624 - 29653668
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||    
T  29653624 ttaaagttgtattggaaatgtaaaatgacattcattttgcaacaa 29653668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 31557445 - 31557489
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||    
T  31557445 ttaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 33822613 - 33822653
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaa 60  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  33822613 ttaaagttgtattgaaaatgtaaagtgacattcattttgaa 33822653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34171207 - 34171163
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  34171207 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 38982255 - 38982299
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||    
T  38982255 ttaaagttgtattggaaatataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 32963118 - 32963161
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||| |||||||||||||  ||||||||||||||||    
T  32963118 taaagttgtattggaaatgtaaagtggtattcattttgaaacaa 32963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 24436585 - 24436614
Alignment:
Q  35 aaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||||||||||||||||||||    
T  24436585 aaatgtaaagtgacattcattttgaaacaa 24436614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 41845392 - 41845433
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    ||||| |||||||  |||||||||||||||||||||||||||    
T  41845392 ttaaaattgtattgaaaatgtaaagtgacattcattttgaaa 41845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 43257961 - 43257998
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  43257961 ttaaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4011746 - 4011790
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||||    
T  4011746 ttaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 17674251 - 17674207
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| ||||  ||| ||||||||||||||||||||||||||    
T  17674251 ttaaagttttattgaaaacgtaaagtgacattcattttgaaacaa 17674207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 33585085 - 33585129
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||||||||||||| |||||||| ||||||    
T  33585085 ttaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaa 33585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 39059849 - 39059805
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||    
T  39059849 ttaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||  ||||||| ||||||||||||||| ||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.000000000000009; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 37225705 - 37225749
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  37225705 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 27483294 - 27483379
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaannnnnnnnnnngttaaagcgacactcattttaaaacggaaggag 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||            |||||||||||||||||||| ||||||||||||    
T  27483294 ttaaagttgtattggaaatgtaaagtgacattcattttgaaaca---tttttttttgttaaagcgacactcattttgaaacggaaggag 27483379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 35239429 - 35239390
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttga 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35239429 ttaaagttgtattagaaatgtaaagtgacattcattttga 35239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 790139 - 790095
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  790139 ttaaagttgtattggaaatgtaaagtgacattaattttgaaacaa 790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 13485915 - 13485959
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  13485915 ttaaagttgtattggaaatgtaaattgacattcattttgaaacaa 13485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 26965609 - 26965653
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  26965609 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 26965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 43169377 - 43169333
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  43169377 ttaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 43169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 46363121 - 46363165
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  46363121 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 54933315 - 54933359
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||    
T  54933315 ttaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 44648512 - 44648555
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  44648512 taaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 2988725 - 2988763
Alignment:
Q  26 ttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  2988725 ttgtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 22414798 - 22414757
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  22414798 ttaaagttatattaaaaatgtaaagtgacattcattttgaaa 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 25722571 - 25722612
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  25722571 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaa 25722612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 31291074 - 31291111
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||||||||||||||||| |||||||||    
T  31291074 ttaaagttgtattagaaatgtaaagtgatattcatttt 31291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 83339 - 83295
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||    
T  83339 ttaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 19552583 - 19552539
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  19552583 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 19552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 25061747 - 25061703
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  25061747 ttaaagttgtattggaaatgtaaagtggcattcattttaaaacaa 25061703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 36771677 - 36771721
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  36771677 ttaaagttgtattgtaaatgtaaagtgacattcattttaaaacaa 36771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 43580518 - 43580474
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||    
T  43580518 ttaaagttgtattgaaaatgtaaagtgacatttattttgaaacaa 43580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43687996 - 43688040
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||    
T  43687996 ttaaagttgtattggaaatgtaaagtgacatttattttggaacaa 43688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 51381764 - 51381720
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||    
T  51381764 ttaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 36310361 - 36310404
Alignment:
Q  21 taaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  36310361 taaagttgtattggaaatgtaaaatgacatttattttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 53716072 - 53716029
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||    
T  53716072 ttaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 36461014 - 36461044
Alignment:
Q  78 taaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||||||    
T  36461014 taaagcgacactcattttaaaacggaaggag 36461044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 1341030 - 1341067
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||  |||||||||||||||||||||||    
T  1341030 ttaaagttgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 41287119 - 41287082
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  41287119 ttaaagttgtattggaaatgtaaagtgacatccatttt 41287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 45095596 - 45095559
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcatttt 57  Q
    |||||||||||||  |||||||||||||||||||||||    
T  45095596 ttaaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 2568113 - 2568157
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  2568113 ttaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 3000795 - 3000751
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  3000795 ttaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 5244629 - 5244585
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||| ||||| |||||||| |||||||||||||| ||||||    
T  5244629 ttaaagttatattaaaaatgtaaggtgacattcattttaaaacaa 5244585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 15514836 - 15514872
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattt 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  15514836 ttaaagttgtattggaaatgtaaagtgacatttattt 15514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 20512607 - 20512651
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  |||||||||| |||||||||||||||||||    
T  20512607 ttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22730968 - 22730924
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  22730968 ttaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 27027776 - 27027732
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| ||||||| |||||||||| ||||||| ||||||||||||    
T  27027776 ttaaatttgtattggaaatgtaaattgacattaattttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 32304015 - 32304051
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattt 56  Q
    |||||||||||||  ||||||||||||||||||||||    
T  32304015 ttaaagttgtattgaaaatgtaaagtgacattcattt 32304051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34059919 - 34059875
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||||||||| ||||||    
T  34059919 ttaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 34059875  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 42939957 - 42939925
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||| ||||    
T  42939957 gttaaagcgacactcattttaaaacggatggag 42939925  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43599931 - 43599975
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||| | |||||||||  |||||||||||||||||||    
T  43599931 ttaaagttgtatgaaaaatgtaaaacgacattcattttgaaacaa 43599975  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 44854358 - 44854314
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||    
T  44854358 ttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 49470832 - 49470788
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  |||||||||  |||||||||||||||||||    
T  49470832 ttaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 50420302 - 50420258
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||| ||||||||| ||||||| ||||| ||||||    
T  50420302 ttaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 50646272 - 50646304
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||| ||||||||||||||||||||||||||    
T  50646272 gttaaaacgacactcattttaaaacggaaggag 50646304  T

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Target: chr3; HSP #43
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 38165752 - 38165783
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacatt 51  Q
    ||||||||||||| ||||||||||||||||||    
T  38165752 ttaaagttgtattggaaatgtaaagtgacatt 38165783  T

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Target: chr3; HSP #44
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 38457503 - 38457460
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaaca 63  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||    
T  38457503 ttaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 8200 - 8156
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||    
T  8200 ttaaagttgtattgaaaatgtaaattgacattcattttgaaacaa 8156  T

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Target: scaffold0047 (Bit Score: 33; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 70565 - 70609
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||    
T  70565 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 70609  T

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Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 70399 - 70367
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||| ||||||||||||||||||||||||||||    
T  70399 gttatagcgacactcattttaaaacggaaggag 70367  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 321768 - 321724
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||    
T  321768 ttaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.000000002; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 1585 - 1546
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttga 59  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  1585 ttaaagttgtattggaaatataaagtgacattcattttga 1546  T

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Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 1533 - 1501
Alignment:
Q  76 gttaaagcgacactcattttaaaacggaaggag 108  Q
    |||||||||||||||||||||||||||| ||||    
T  1533 gttaaagcgacactcattttaaaacggatggag 1501  T

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Target: scaffold0519 (Bit Score: 31; Significance: 0.000000008; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 7811 - 7852
Alignment:
Q  22 aaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  7811 aaagttgtatta-aaatgtaaagtgacattcattttaaaacaa 7852  T

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Target: scaffold0886 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 4219 - 4263
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| |||||||||||||||||||| ||||| ||||| ||||||    
T  4219 ttaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 4263  T

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Target: scaffold0580 (Bit Score: 29; Significance: 0.0000001; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 1685 - 1642
Alignment:
Q  20 ttaaagttgtatta--gaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  1685 ttaaagttgtattttggaaatgtaaagtgacattcattttgaaa 1642  T

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Target: scaffold0580; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 9424 - 9381
Alignment:
Q  20 ttaaagttgtatta--gaaatgtaaagtgacattcattttgaaa 61  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  9424 ttaaagttgtattttggaaatgtaaagtgacattcattttgaaa 9381  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 13169 - 13213
Alignment:
Q  20 ttaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 64  Q
    ||||| ||||||| ||||||||||||||| |||||||| ||||||    
T  13169 ttaaaattgtattggaaatgtaaagtgacgttcattttaaaacaa 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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