View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4416_low_17 (Length: 319)

Name: NF4416_low_17
Description: NF4416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4416_low_17
NF4416_low_17
[»] chr8 (50 HSPs)
chr8 (7-303)||(14541552-14541848)
chr8 (105-303)||(34461488-34461686)
chr8 (126-271)||(8471339-8471484)
chr8 (115-303)||(18673015-18673202)
chr8 (126-266)||(34168139-34168279)
chr8 (111-301)||(27416551-27416743)
chr8 (142-303)||(13109037-13109198)
chr8 (122-303)||(9022445-9022625)
chr8 (121-287)||(32271574-32271739)
chr8 (111-202)||(4760471-4760562)
chr8 (198-303)||(7612548-7612651)
chr8 (109-263)||(38328965-38329118)
chr8 (192-303)||(11257590-11257699)
chr8 (126-200)||(4989630-4989704)
chr8 (110-264)||(32326636-32326790)
chr8 (122-259)||(36915457-36915594)
chr8 (110-266)||(6839292-6839448)
chr8 (126-202)||(9880428-9880504)
chr8 (126-202)||(39463407-39463483)
chr8 (105-202)||(31899154-31899251)
chr8 (166-286)||(35052538-35052657)
chr8 (213-303)||(22601185-22601273)
chr8 (213-303)||(27109835-27109923)
chr8 (189-303)||(30788985-30789097)
chr8 (228-300)||(3095533-3095603)
chr8 (213-266)||(11336047-11336100)
chr8 (125-206)||(31693545-31693626)
chr8 (118-202)||(43084546-43084630)
chr8 (111-202)||(43448866-43448957)
chr8 (129-264)||(45187226-45187361)
chr8 (213-266)||(7129362-7129415)
chr8 (117-202)||(40228724-40228809)
chr8 (212-303)||(5044240-5044329)
chr8 (190-266)||(18666536-18666612)
chr8 (122-202)||(39698589-39698669)
chr8 (126-217)||(11168818-11168909)
chr8 (211-266)||(16209026-16209081)
chr8 (222-299)||(8382501-8382576)
chr8 (216-266)||(41790158-41790208)
chr8 (213-258)||(1774085-1774130)
chr8 (228-300)||(32661358-32661428)
chr8 (122-202)||(9304557-9304637)
chr8 (138-202)||(17921107-17921171)
chr8 (199-266)||(26439051-26439116)
chr8 (222-266)||(39970410-39970454)
chr8 (118-169)||(8106807-8106858)
chr8 (111-209)||(4530009-4530107)
chr8 (121-206)||(2812921-2813006)
chr8 (211-263)||(2067788-2067840)
chr8 (126-202)||(29025676-29025752)
[»] chr5 (57 HSPs)
chr5 (117-303)||(42329462-42329648)
chr5 (110-299)||(27652230-27652419)
chr5 (107-303)||(29653420-29653616)
chr5 (126-303)||(793531-793708)
chr5 (126-299)||(33822428-33822601)
chr5 (122-303)||(33584898-33585077)
chr5 (122-284)||(36296055-36296217)
chr5 (118-303)||(4833555-4833735)
chr5 (111-303)||(29044770-29044956)
chr5 (121-298)||(32962930-32963106)
chr5 (122-302)||(34171215-34171386)
chr5 (105-303)||(36660478-36660672)
chr5 (111-303)||(36783406-36783596)
chr5 (122-202)||(34972573-34972653)
chr5 (122-264)||(43257784-43257925)
chr5 (118-202)||(8336326-8336410)
chr5 (126-202)||(42103990-42104066)
chr5 (111-202)||(2729698-2729789)
chr5 (126-303)||(166576-166751)
chr5 (122-303)||(4751453-4751632)
chr5 (126-240)||(34919847-34919961)
chr5 (122-202)||(26660904-26660984)
chr5 (122-202)||(26932497-26932577)
chr5 (118-202)||(39566333-39566417)
chr5 (122-202)||(39730096-39730176)
chr5 (126-202)||(42661867-42661943)
chr5 (111-201)||(14620405-14620496)
chr5 (111-202)||(39504875-39504966)
chr5 (122-303)||(4742189-4742368)
chr5 (213-266)||(31557355-31557408)
chr5 (121-202)||(42977995-42978076)
chr5 (126-202)||(21375577-21375653)
chr5 (108-303)||(39059856-39060044)
chr5 (211-266)||(31889805-31889860)
chr5 (126-266)||(12167537-12167678)
chr5 (121-202)||(14006042-14006123)
chr5 (190-303)||(15400222-15400334)
chr5 (118-217)||(15567048-15567147)
chr5 (190-259)||(14980042-14980111)
chr5 (118-191)||(27600555-27600628)
chr5 (122-202)||(39335126-39335206)
chr5 (197-264)||(4011658-4011725)
chr5 (122-201)||(6519128-6519207)
chr5 (221-299)||(32690753-32690829)
chr5 (222-300)||(38982168-38982244)
chr5 (228-300)||(28640136-28640206)
chr5 (123-192)||(34445952-34446021)
chr5 (126-202)||(3305936-3306012)
chr5 (197-253)||(4967489-4967545)
chr5 (197-264)||(7388190-7388257)
chr5 (212-266)||(8961047-8961101)
chr5 (238-302)||(12992114-12992176)
chr5 (211-271)||(1513060-1513120)
chr5 (170-202)||(4425124-4425156)
chr5 (122-190)||(13761880-13761948)
chr5 (258-298)||(17674264-17674304)
chr5 (126-202)||(29807241-29807317)
[»] chr4 (71 HSPs)
chr4 (111-303)||(24259658-24259850)
chr4 (110-303)||(34124342-34124535)
chr4 (122-303)||(17499641-17499822)
chr4 (111-303)||(28116292-28116484)
chr4 (107-303)||(45889610-45889806)
chr4 (111-303)||(51434170-51434362)
chr4 (126-303)||(31941605-31941779)
chr4 (122-303)||(47321192-47321373)
chr4 (117-303)||(19282329-19282514)
chr4 (126-267)||(54233899-54234040)
chr4 (126-303)||(4408105-4408282)
chr4 (111-271)||(55126576-55126736)
chr4 (111-262)||(6462102-6462253)
chr4 (140-271)||(34534035-34534166)
chr4 (116-266)||(34360087-34360237)
chr4 (166-281)||(55548188-55548305)
chr4 (110-202)||(27653824-27653916)
chr4 (126-202)||(52957721-52957797)
chr4 (111-202)||(2728314-2728405)
chr4 (122-303)||(30022115-30022293)
chr4 (116-299)||(34096067-34096248)
chr4 (190-303)||(19849131-19849242)
chr4 (105-202)||(1819712-1819809)
chr4 (122-202)||(52847981-52848061)
chr4 (111-202)||(18430139-18430230)
chr4 (111-202)||(38991679-38991770)
chr4 (126-202)||(24941030-24941106)
chr4 (106-202)||(29519436-29519532)
chr4 (122-202)||(40345274-40345354)
chr4 (189-300)||(42672439-42672548)
chr4 (126-201)||(39984968-39985043)
chr4 (189-303)||(45520451-45520563)
chr4 (189-303)||(37445707-37445819)
chr4 (189-266)||(15501147-15501224)
chr4 (189-266)||(39671099-39671176)
chr4 (110-202)||(2493252-2493344)
chr4 (126-202)||(37654560-37654636)
chr4 (190-266)||(52732673-52732749)
chr4 (211-266)||(21045215-21045270)
chr4 (126-201)||(28734749-28734824)
chr4 (111-202)||(53814413-53814504)
chr4 (111-202)||(56373491-56373582)
chr4 (122-264)||(36805377-36805518)
chr4 (122-266)||(56556205-56556346)
chr4 (197-266)||(44855326-44855395)
chr4 (121-206)||(49089609-49089694)
chr4 (197-266)||(51930658-51930727)
chr4 (122-202)||(42605722-42605802)
chr4 (111-201)||(54042098-54042189)
chr4 (136-202)||(20448189-20448255)
chr4 (116-202)||(40010793-40010879)
chr4 (212-266)||(43421140-43421194)
chr4 (126-202)||(19878798-19878874)
chr4 (228-303)||(29289923-29289995)
chr4 (122-202)||(44571792-44571872)
chr4 (122-201)||(50623235-50623314)
chr4 (140-202)||(29370753-29370815)
chr4 (197-266)||(31817200-31817270)
chr4 (222-303)||(31987351-31987430)
chr4 (212-266)||(54512105-54512159)
chr4 (217-266)||(11835187-11835235)
chr4 (189-266)||(32140979-32141056)
chr4 (189-299)||(38761819-38761925)
chr4 (126-190)||(34316382-34316446)
chr4 (126-202)||(45043519-45043595)
chr4 (126-202)||(49080408-49080484)
chr4 (109-303)||(22212388-22212580)
chr4 (215-303)||(35928538-35928622)
chr4 (222-300)||(30492778-30492855)
chr4 (222-266)||(38692472-38692516)
chr4 (228-264)||(50072341-50072377)
[»] chr3 (77 HSPs)
chr3 (111-303)||(54933115-54933307)
chr3 (126-297)||(25722386-25722557)
chr3 (126-303)||(2988535-2988712)
chr3 (126-303)||(43687808-43687985)
chr3 (126-303)||(54261466-54261643)
chr3 (122-303)||(20512417-20512598)
chr3 (118-298)||(42006979-42007159)
chr3 (122-303)||(53560715-53560896)
chr3 (126-303)||(51381773-51381952)
chr3 (122-303)||(36541542-36541723)
chr3 (126-303)||(32303830-32304007)
chr3 (118-303)||(43169385-43169570)
chr3 (140-303)||(44645389-44645553)
chr3 (118-253)||(52201843-52201978)
chr3 (121-266)||(27483115-27483260)
chr3 (116-266)||(2567929-2568079)
chr3 (118-277)||(2662413-2662570)
chr3 (122-202)||(38363941-38364021)
chr3 (107-202)||(47138115-47138210)
chr3 (108-202)||(47895250-47895344)
chr3 (122-243)||(10351936-10352057)
chr3 (121-202)||(45213641-45213722)
chr3 (192-303)||(83346-83455)
chr3 (126-202)||(33193955-33194031)
chr3 (190-303)||(647583-647694)
chr3 (189-266)||(35239447-35239524)
chr3 (125-250)||(38165587-38165712)
chr3 (191-303)||(46363002-46363112)
chr3 (111-266)||(25061781-25061934)
chr3 (126-202)||(36729696-36729772)
chr3 (126-202)||(51398160-51398236)
chr3 (135-266)||(1340865-1340996)
chr3 (111-202)||(23525225-23525316)
chr3 (118-201)||(31853478-31853561)
chr3 (197-303)||(37225593-37225697)
chr3 (111-202)||(41850531-41850622)
chr3 (120-202)||(45391876-45391958)
chr3 (197-266)||(26965506-26965575)
chr3 (189-301)||(38457513-38457623)
chr3 (122-202)||(3152727-3152807)
chr3 (228-303)||(27027784-27027857)
chr3 (219-303)||(43580527-43580610)
chr3 (190-299)||(27039382-27039490)
chr3 (126-264)||(44648337-44648476)
chr3 (192-303)||(44854365-44854475)
chr3 (212-266)||(36771589-36771643)
chr3 (114-202)||(45566949-45567034)
chr3 (221-286)||(49470857-49470922)
chr3 (126-202)||(2458158-2458234)
chr3 (126-202)||(39359070-39359146)
chr3 (222-300)||(4391958-4392034)
chr3 (107-266)||(31290882-31291040)
chr3 (197-266)||(34059953-34060020)
chr3 (122-200)||(49470926-49471004)
chr3 (197-266)||(790158-790227)
chr3 (197-266)||(19552617-19552686)
chr3 (145-202)||(30426266-30426323)
chr3 (108-253)||(40048973-40049118)
chr3 (218-301)||(5244638-5244719)
chr3 (122-202)||(30431270-30431349)
chr3 (126-202)||(53200605-53200681)
chr3 (222-300)||(3000807-3000883)
chr3 (222-300)||(35099389-35099465)
chr3 (159-202)||(36381329-36381372)
chr3 (222-266)||(16240662-16240706)
chr3 (126-202)||(41287420-41287496)
chr3 (126-202)||(44676371-44676447)
chr3 (189-264)||(41287166-41287241)
chr3 (212-266)||(53716091-53716143)
chr3 (140-202)||(35557691-35557753)
chr3 (121-175)||(42940155-42940209)
chr3 (228-266)||(43599859-43599897)
chr3 (190-252)||(43736861-43736922)
chr3 (217-266)||(22414840-22414888)
chr3 (108-153)||(38277951-38277996)
chr3 (126-202)||(38016524-38016600)
chr3 (122-186)||(51482102-51482166)
[»] chr7 (62 HSPs)
chr7 (104-303)||(32345739-32345938)
chr7 (122-303)||(39117411-39117591)
chr7 (122-303)||(36446992-36447173)
chr7 (122-303)||(31416673-31416854)
chr7 (111-303)||(26963530-26963722)
chr7 (126-303)||(19906465-19906640)
chr7 (122-299)||(6521872-6522049)
chr7 (171-303)||(10684801-10684933)
chr7 (122-202)||(44453283-44453363)
chr7 (111-202)||(23155372-23155463)
chr7 (181-303)||(36836110-36836231)
chr7 (140-303)||(42043926-42044082)
chr7 (111-266)||(42121628-42121783)
chr7 (158-264)||(29001523-29001629)
chr7 (171-303)||(30515024-30515156)
chr7 (189-286)||(34733379-34733472)
chr7 (122-202)||(35777969-35778049)
chr7 (140-303)||(17869288-17869449)
chr7 (107-202)||(42879840-42879935)
chr7 (126-303)||(42259476-42259651)
chr7 (122-199)||(16564724-16564801)
chr7 (122-199)||(16600861-16600938)
chr7 (122-215)||(48684860-48684953)
chr7 (192-303)||(1103535-1103644)
chr7 (126-202)||(1742141-1742217)
chr7 (118-222)||(19276535-19276638)
chr7 (122-202)||(37815874-37815954)
chr7 (111-202)||(27935917-27936008)
chr7 (213-303)||(34002147-34002235)
chr7 (122-202)||(23935571-23935651)
chr7 (110-206)||(27947410-27947506)
chr7 (122-202)||(29530856-29530936)
chr7 (209-264)||(19277055-19277110)
chr7 (197-303)||(41905933-41906036)
chr7 (110-202)||(7795152-7795244)
chr7 (116-200)||(8334209-8334293)
chr7 (122-201)||(45933510-45933589)
chr7 (213-266)||(22627368-22627421)
chr7 (197-266)||(28044139-28044208)
chr7 (122-202)||(10599513-10599593)
chr7 (122-202)||(13405048-13405128)
chr7 (222-300)||(40298901-40298977)
chr7 (128-202)||(24680278-24680352)
chr7 (155-303)||(3680879-3681025)
chr7 (197-262)||(18886735-18886800)
chr7 (126-202)||(22298146-22298227)
chr7 (122-199)||(31418434-31418511)
chr7 (144-201)||(36808085-36808142)
chr7 (190-259)||(40207381-40207450)
chr7 (197-266)||(42010573-42010642)
chr7 (189-286)||(47272219-47272314)
chr7 (228-303)||(18733506-18733579)
chr7 (115-266)||(33056200-33056352)
chr7 (126-202)||(41137878-41137954)
chr7 (228-298)||(5723058-5723126)
chr7 (116-202)||(45948545-45948631)
chr7 (213-262)||(32275285-32275334)
chr7 (222-300)||(33845433-33845509)
chr7 (122-217)||(36915504-36915599)
chr7 (228-266)||(48838714-48838752)
chr7 (213-266)||(36447625-36447678)
chr7 (107-163)||(40339647-40339703)
[»] scaffold0047 (1 HSPs)
scaffold0047 (122-303)||(70376-70557)
[»] chr2 (53 HSPs)
chr2 (122-303)||(25332620-25332801)
chr2 (122-303)||(775807-775988)
chr2 (104-271)||(14698070-14698237)
chr2 (126-303)||(43388584-43388759)
chr2 (122-299)||(4566044-4566221)
chr2 (122-303)||(33093418-33093598)
chr2 (125-303)||(39866596-39866775)
chr2 (104-303)||(10580761-10580960)
chr2 (170-303)||(2459823-2459956)
chr2 (168-303)||(41984468-41984603)
chr2 (115-266)||(34225835-34225986)
chr2 (118-217)||(38809833-38809932)
chr2 (111-303)||(7743451-7743641)
chr2 (122-201)||(16807440-16807519)
chr2 (122-201)||(16846721-16846800)
chr2 (111-264)||(36360287-36360440)
chr2 (189-302)||(11171792-11171905)
chr2 (118-202)||(42743178-42743260)
chr2 (126-202)||(4133172-4133248)
chr2 (111-202)||(25383397-25383488)
chr2 (192-303)||(37106912-37107023)
chr2 (104-300)||(24775242-24775436)
chr2 (126-202)||(441158-441234)
chr2 (122-202)||(36106326-36106406)
chr2 (126-202)||(38926756-38926832)
chr2 (197-298)||(1298778-1298877)
chr2 (122-264)||(40987205-40987347)
chr2 (113-202)||(32227925-32228014)
chr2 (110-202)||(8774202-8774294)
chr2 (122-202)||(12342243-12342323)
chr2 (122-266)||(14378171-14378315)
chr2 (126-202)||(29396607-29396683)
chr2 (126-202)||(29808963-29809039)
chr2 (197-303)||(4840725-4840829)
chr2 (107-206)||(13562140-13562238)
chr2 (189-303)||(43344213-43344325)
chr2 (197-303)||(43460823-43460927)
chr2 (213-266)||(4766226-4766279)
chr2 (109-202)||(12393829-12393922)
chr2 (110-202)||(8789341-8789433)
chr2 (196-264)||(16316796-16316864)
chr2 (126-202)||(42753897-42753973)
chr2 (211-266)||(40410528-40410583)
chr2 (126-202)||(30855255-30855331)
chr2 (222-300)||(1360230-1360306)
chr2 (189-264)||(1381826-1381901)
chr2 (140-262)||(29795140-29795262)
chr2 (126-202)||(18717226-18717302)
chr2 (170-201)||(19636659-19636690)
chr2 (170-201)||(19835252-19835283)
chr2 (166-201)||(34546115-34546150)
chr2 (222-264)||(4536658-4536700)
chr2 (111-164)||(18374362-18374415)
[»] chr6 (28 HSPs)
chr6 (118-303)||(17345057-17345238)
chr6 (118-303)||(34576594-34576775)
chr6 (116-303)||(25932679-25932866)
chr6 (129-303)||(26189558-26189733)
chr6 (137-303)||(6140649-6140815)
chr6 (123-246)||(6992508-6992631)
chr6 (189-303)||(12828671-12828783)
chr6 (137-303)||(6143134-6143300)
chr6 (189-303)||(29927258-29927370)
chr6 (213-303)||(29915592-29915680)
chr6 (197-301)||(26669096-26669198)
chr6 (138-202)||(1135075-1135139)
chr6 (122-202)||(19675128-19675208)
chr6 (122-202)||(23259248-23259328)
chr6 (126-202)||(24555854-24555930)
chr6 (217-303)||(31275659-31275743)
chr6 (125-202)||(10520316-10520393)
chr6 (198-266)||(10494760-10494829)
chr6 (189-299)||(4123846-4123953)
chr6 (111-201)||(24163625-24163716)
chr6 (212-266)||(1924687-1924741)
chr6 (122-188)||(29713329-29713395)
chr6 (213-303)||(23936598-23936684)
chr6 (111-192)||(34513570-34513651)
chr6 (166-206)||(10540443-10540483)
chr6 (126-181)||(234196-234251)
chr6 (217-303)||(34439427-34439516)
chr6 (118-163)||(9940836-9940881)
[»] chr1 (69 HSPs)
chr1 (122-303)||(28200145-28200326)
chr1 (122-303)||(44582701-44582882)
chr1 (111-266)||(49894867-49895022)
chr1 (126-303)||(254838-255015)
chr1 (126-303)||(26252168-26252345)
chr1 (126-302)||(5854151-5854327)
chr1 (122-271)||(50591241-50591390)
chr1 (122-303)||(22664989-22665166)
chr1 (126-283)||(42650176-42650332)
chr1 (126-303)||(672209-672383)
chr1 (126-303)||(2459058-2459231)
chr1 (118-302)||(11134379-11134563)
chr1 (166-303)||(44024595-44024732)
chr1 (111-271)||(9552269-9552427)
chr1 (126-238)||(9333193-9333305)
chr1 (126-238)||(9356966-9357078)
chr1 (172-304)||(17806348-17806478)
chr1 (126-266)||(84445-84585)
chr1 (122-266)||(24040947-24041091)
chr1 (126-303)||(28751335-28751510)
chr1 (107-253)||(45749407-45749553)
chr1 (198-271)||(38132189-38132262)
chr1 (197-303)||(11650108-11650212)
chr1 (127-271)||(37437331-37437476)
chr1 (118-206)||(38530756-38530844)
chr1 (118-202)||(49468628-49468712)
chr1 (211-303)||(5317590-5317679)
chr1 (122-202)||(15823184-15823264)
chr1 (122-266)||(43755113-43755256)
chr1 (111-202)||(5463725-5463816)
chr1 (111-202)||(35847846-35847937)
chr1 (126-264)||(17919748-17919885)
chr1 (111-209)||(40717272-40717370)
chr1 (108-262)||(48259772-48259926)
chr1 (104-202)||(52125039-52125137)
chr1 (109-202)||(15573763-15573856)
chr1 (122-202)||(31491691-31491771)
chr1 (126-202)||(32806863-32806939)
chr1 (216-299)||(2245840-2245923)
chr1 (111-202)||(25151960-25152051)
chr1 (111-202)||(49426329-49426420)
chr1 (126-266)||(50349784-50349930)
chr1 (105-202)||(10842930-10843027)
chr1 (189-266)||(43105592-43105669)
chr1 (126-266)||(30006215-30006355)
chr1 (111-202)||(44108751-44108842)
chr1 (126-266)||(48319932-48320067)
chr1 (126-299)||(6332221-6332392)
chr1 (190-264)||(10690946-10691020)
chr1 (126-264)||(12002333-12002471)
chr1 (213-266)||(1430551-1430604)
chr1 (126-202)||(1740565-1740641)
chr1 (166-206)||(24611484-24611524)
chr1 (213-303)||(43929735-43929822)
chr1 (211-302)||(52403527-52403616)
chr1 (213-299)||(1428920-1429004)
chr1 (111-163)||(4471319-4471371)
chr1 (126-202)||(9915594-9915670)
chr1 (189-253)||(44583870-44583933)
chr1 (116-187)||(34110692-34110763)
chr1 (197-299)||(43738252-43738352)
chr1 (123-202)||(50094380-50094459)
chr1 (214-303)||(15698766-15698853)
chr1 (122-175)||(30686811-30686864)
chr1 (189-266)||(40060896-40060973)
chr1 (228-300)||(45377179-45377249)
chr1 (122-202)||(43358135-43358215)
chr1 (126-202)||(46286743-46286819)
chr1 (122-186)||(48025175-48025239)
[»] scaffold0003 (1 HSPs)
scaffold0003 (110-303)||(321776-321969)
[»] scaffold0072 (1 HSPs)
scaffold0072 (108-266)||(11991-12148)
[»] scaffold0048 (1 HSPs)
scaffold0048 (126-202)||(62783-62859)
[»] scaffold0110 (1 HSPs)
scaffold0110 (111-202)||(24652-24743)
[»] scaffold0119 (1 HSPs)
scaffold0119 (197-301)||(1595-1697)
[»] scaffold0078 (1 HSPs)
scaffold0078 (122-199)||(1371-1448)
[»] scaffold0519 (1 HSPs)
scaffold0519 (231-303)||(7732-7802)
[»] scaffold0886 (1 HSPs)
scaffold0886 (189-303)||(4098-4211)
[»] scaffold0758 (1 HSPs)
scaffold0758 (126-198)||(6254-6326)
[»] scaffold0238 (1 HSPs)
scaffold0238 (190-266)||(16031-16106)
[»] scaffold0015 (1 HSPs)
scaffold0015 (122-202)||(21004-21084)
[»] scaffold0007 (2 HSPs)
scaffold0007 (222-299)||(158154-158229)
scaffold0007 (107-176)||(158265-158333)
[»] scaffold0580 (2 HSPs)
scaffold0580 (190-235)||(1690-1735)
scaffold0580 (190-235)||(9429-9474)


Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 7 - 303
Target Start/End: Original strand, 14541552 - 14541848
Alignment:
Q  7 tcgaagaatatggaagcaaatcttttctgacacaatatgtgata--atatacgtataacaccaaatttgttgagcaggtgcattttgtagcattcacagt 104  Q
    |||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14541552 tcgaagaagatggaagcaaatattttctgacacaatatgtgatataatatacgtataacaccaaatttgttgagcaggtgcattttgtagcattcacaat 14541651  T
Q  105 atatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttacta 204  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14541652 atatattacttcatccattttaaaatgagtatcattttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttacta 14541751  T
Q  205 aaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||||    
T  14541752 aaataaccttactttataagaacaagacaaacttaaagttgcattgaaaat--tgtgagagagaaaagttgaagtatttattaaggataaagttggaag 14541848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 105 - 303
Target Start/End: Original strand, 34461488 - 34461686
Alignment:
Q  105 atatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttacta 204  Q
    |||||||||| | | | ||| ||||||||| |||||||||||||||| | |||||||||  |||| |||||| |||||||||||||||||||||||||||    
T  34461488 atatattactccttacgtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataaaatagtcaaatgtcataacaattttacta 34461587  T
Q  205 aaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||| |||||| ||| ||||||||||||    
T  34461588 aaataatcttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaag 34461686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 126 - 271
Target Start/End: Complemental strand, 8471484 - 8471339
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||| | |||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8471484 aaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataaagtagtcaaatgtcataccaattttactaaaataaccttactttataaga 8471385  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    | |||||||||||||||||||||||||| |||||||||||||||||    
T  8471384 aaaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaa 8471339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 115 - 303
Target Start/End: Original strand, 18673015 - 18673202
Alignment:
Q  115 tcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctt 214  Q
    |||||||||||||||||||| ||||| ||||||||| || ||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18673015 tcatccattttaaaatgagtgtcgctctagccaattacacacaaattaagaaatgaaataaagtagtcaaatgtcataacaattttactaaaataacctt 18673114  T
Q  215 actttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    || |||| |||| || ||||||||||| ||| ||||||| ||||||||||||||||| ||| |||||||||||| | ||||||||||||    
T  18673115 ac-ttatcagaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaagttggaag 18673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 34168139 - 34168279
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||||||||| || || ||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34168139 aaaatgagtgtcgctttagccaattacacacggattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataaga 34168238  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  34168239 acaagacaaacttaaagttgcattgaaaattgtgtgagaga 34168279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 111 - 301
Target Start/End: Complemental strand, 27416743 - 27416551
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||||||| |||| |||||||| |||||| || ||||||||  ||||||||  |||  |||||||||||||||||||||| |||||||||||||||||    
T  27416743 tacttcatccgtttttaaatgagtgtcgcttcagtcaattgcacgcagattaaggaatataataaagtagtcaaatgtcatagcaattttactaaaataa 27416644  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaa--ttgaagtatttattaaggataaagttgga 301  Q
    |||||||||||||||| |||||||||||| | ||||||||||| ||||||| ||||||||||  ||| |||||||||| ||| ||||||||||    
T  27416643 ccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaaagttgga 27416551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 303
Target Start/End: Complemental strand, 13109198 - 13109037
Alignment:
Q  142 tagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaa 241  Q
    |||||||||||| ||| |||||  |||| |||||| || ||||||||||||  ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  13109198 tagccaattgcacacaaattaaggaatgaaataaaatattcaaatgtcatagtaattttactaaaataaccttattttataagaaaaagacaaatttaaa 13109099  T
Q  242 gttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
     ||||||| ||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  13109098 tttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagagttggaag 13109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 9022625 - 9022445
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| |||||||||||||| |||||||||| |||||||| || || |||   | ||||||| |||||||||| |   |||  |||||    
T  9022625 ttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgttttat 9022526  T
Q  222 aagaacaagacaaactt-aaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | ||| ||||||||||| ||||||||||||||| ||||||  |||| |||| ||| |||||||||| ||| ||||||||||||    
T  9022525 atgaaaaagacaaacttaaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 9022445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 121 - 287
Target Start/End: Complemental strand, 32271739 - 32271574
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 220  Q
    |||||||||||||| ||| |||||  ||||||| ||||||  |  |||| |||||||| | ||||| | ||| ||||||||||||||||| ||||||| |    
T  32271739 attttaaaatgagtgtcgttttagttaattgcacacagat--aggaatgaaataaagttgacaaatcttatagcaattttactaaaataatcttacttga 32271642  T
Q  221 taagaac-aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttatta 287  Q
    ||||||  || | ||||||||| ||||||||||| || ||||||||| |||| |||||||||||||||    
T  32271641 taagaaagaaaaaaaacttaaaattgcattgaaaattatgtgagagataaaagttgaagtatttatta 32271574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 4760471 - 4760562
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||||||||||||| |||||||||||||||||| | |||||||  |||| |||||||||||||||||||||| |||||||||    
T  4760471 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 4760562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 303
Target Start/End: Complemental strand, 7612651 - 7612548
Alignment:
Q  198 tttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagt 297  Q
    ||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| ||||||||  ||||||| ||| |||||||||| ||| ||||||    
T  7612651 tttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttatttagggtaaagt 7612554  T
Q  298 tggaag 303  Q
    ||||||    
T  7612553 tggaag 7612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 38328965 - 38329118
Alignment:
Q  109 attacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaat 208  Q
    |||||| | ||| ||| ||||||||| ||||||||| |||||||| |||||||||  |||||||| || || |||   | ||||||| |||||||||| |    
T  38328965 attactccctccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaact 38329064  T
Q  209 aaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgag 263  Q
      |||||||||||||  | |||||||||||||||||||||||||| |||||||||    
T  38329065 g-ccttactttataatcaaaagacaaacttaaagttgcattgaaaattgtgtgag 38329118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 11257699 - 11257590
Alignment:
Q  192 aacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaagga 291  Q
    |||| |||||||||| || | ||| ||||||||||  ||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||| ||      
T  11257699 aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagttgaagtatttattgagat 11257602  T
Q  292 taaagttggaag 303  Q
    ||||||||||||    
T  11257601 taaagttggaag 11257590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 4989704 - 4989630
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttt 200  Q
    ||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||    
T  4989704 aaaatgagtttcgctttaaccaattgcatacatattaaagaatggaataaagtagtcaaatatcatagcaatttt 4989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 264
Target Start/End: Original strand, 32326636 - 32326790
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    ||||| ||||| ||||||||||||| ||||||||| |||||||| |||||||||  |||| ||| || || |||   | | ||||| |||||||||| |     
T  32326636 ttactacatccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactg 32326735  T
Q  210 accttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
     ||||  |||||| ||| |||||||| ||||||||||||||||| ||||||||||    
T  32326736 cccttgttttatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 32326790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 36915594 - 36915457
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| |||| |||||||||||||||||||  |||||||| || || |||   | ||||| | |||||||||| |  ||||  |||||    
T  36915594 ttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgttttat 36915495  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtg 259  Q
    | ||| |||||||||||||||||||||||||| |||||    
T  36915494 atgaaaaagacaaacttaaagttgcattgaaaattgtg 36915457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 266
Target Start/End: Complemental strand, 6839448 - 6839292
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    ||||||| ||| ||| ||||||||| ||| |||| || |||| | |||||||||| |||||||| || || |||   | ||||||| |||||||||| |     
T  6839448 ttacttcctccgtttaaaaatgagtgtcgttttaacccattgtacacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattg 6839349  T
Q  210 accttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
     | |||||||||||||| ||||||||| |||| ||||||||||| || |||||||||    
T  6839348 cctttactttataagaaaaagacaaacataaaattgcattgaaaattatgtgagaga 6839292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 9880428 - 9880504
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||| ||||||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||    
T  9880428 aaaatgagtgtcgctttaaccaattgcacacagattaagaaatggaataaagtggtcaaatgtcatagcaattttac 9880504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 39463483 - 39463407
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  |||||||||||||||||||||||| || |||||||||    
T  39463483 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 39463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 31899154 - 31899251
Alignment:
Q  105 atatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| |||| |||| |||| ||||||||| |||||||||||||||||| | | |||||  |||| |||||||| ||| |||||||||||||||||||    
T  31899154 atatagtactccatctatttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagttgtcgaatgtcataacaattttac 31899251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 35052657 - 35052538
Alignment:
Q  166 aatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagag 265  Q
    |||| |||||||||||| ||| |||||  ||||||| |||||||| |||| ||| |||||| |||| ||  ||||||||||||||||| || ||||||||    
T  35052657 aatgaaataaagtagtcgaatatcatagtaattttattaaaataatcttatttt-taagaaaaagataagtttaaagttgcattgaaaattatgtgagag 35052559  T
Q  266 agaaaaattgaagtatttatt 286  Q
    |||||| ||  ||||||||||    
T  35052558 agaaaattttgagtatttatt 35052538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 22601273 - 22601185
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||  ||||||||  ||| |||||||||  ||| ||||||||||||    
T  22601273 ttactttataagaaaaagacaaacttaaagttgcattgaaaattctgt--gagagaaaggttggagtatttatcgagggtaaagttggaag 22601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 27109835 - 27109923
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| | ||||||||||||||||||||| || ||||||  ||||||||| ||  |||||||||| ||| ||||||||||||    
T  27109835 ttactttataagaaaaggacaaacttaaagttgcattggaaattgtgt--gagagaaaagttagagtatttattgagggtaaagttggaag 27109923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 30789097 - 30788985
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| ||||| |||| |  |||||||||||||||| |||||||| ||||||||| ||||||| || |||  ||||||||| ||| |||||||| |||    
T  30789097 cataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgt--gagagaaaagttggagtatttactaa 30789000  T
Q  289 ggataaagttggaag 303  Q
    || ||||||| ||||    
T  30788999 gggtaaagttagaag 30788985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 3095533 - 3095603
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||||||||||||||||||||||||   ||||| ||||||||| |||||||||||||| ||| |||||||||    
T  3095533 aagacaaacttaaagttgcattgaaaa--gtgtgcgagagaaaagttgaagtatttattgagggtaaagttgg 3095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 11336047 - 11336100
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  11336047 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 11336100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 31693545 - 31693626
Alignment:
Q  125 taaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||| | ||||||||||||| |||| |||  ||||  |||  ||||||||||||||||||||||||||||||||||||    
T  31693545 taaaatgaatgtcgctttagccaactgcacacatgttaaggaatataataaagtagtcaaatgtcataacaattttactaaa 31693626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 43084546 - 43084630
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| || |||||| |||||||| ||| |||||  |||| ||||||||||||||||||||||  ||||||||    
T  43084546 tccattttaaaataagtgtcactttagtcaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagtaattttac 43084630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 43448957 - 43448866
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| |||||| || ||||||||| ||||| || ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  43448957 tactccatccgtttcaaaatgggtgtcgctttagtcaattacacacatattaatgaatgaaataaagtagtcaaatgtcatatcaattttac 43448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 264
Target Start/End: Original strand, 45187226 - 45187361
Alignment:
Q  129 atgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaca 228  Q
    |||||| |||||||||||||||||| |||||||||  |||  ||| || || |||   | ||| ||| |||||||||| |  ||||  |||||||||| |    
T  45187226 atgagtgtcgctttagccaattgcacacagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaa 45187325  T
Q  229 agacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||||||||||||||||| |||||| ||||| ||||    
T  45187326 agacaaacttaaagttgctttgaaaattgtgagaga 45187361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 7129415 - 7129362
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||| |||||||| |||||||||||||| || ||||||||||||    
T  7129415 ttactttataagaataagacaaaattaaagttgcattggaaattgtgtgagaga 7129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 40228809 - 40228724
Alignment:
Q  117 atccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||| ||||||||| ||  ||||| |||||||| | | |||||  |||| ||||||||||||||||||||||||||||||||    
T  40228809 atccgtttcaaaatgagtgtcattttagtcaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 40228724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 5044240 - 5044329
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||| || || ||||| ||||||||| ||| ||| |||||||| |||  ||| |||||||||||||| || |||||||||||||    
T  5044240 cttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtgataga--aaagttgaagtatttattgagaataaagttggaag 5044329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 18666536 - 18666612
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||| |||||||||| |  |||||||||||||||| |||||||   |||||||||||| ||| ||||||||||||    
T  18666536 ataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgagaga 18666612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 39698589 - 39698669
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| || |||||| |||||||| ||| |||||   ||| |||||||||||||||||| ||| |||||||||    
T  39698589 ttttaaaatgagtgtctctttaggcaattgcacacatattaaggtatgaaataaagtagtcaaatgttatagcaattttac 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 11168909 - 11168818
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||| |||||||||||| || || |||||||||  |||| ||| |  ||||||||| ||||| |||||||||| ||||| |||||||    
T  11168909 aaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatagccttact 11168818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 16209081 - 16209026
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| |||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  16209081 ccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagaga 16209026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 8382501 - 8382576
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||| |||||||||||| ||||||||||||| ||||||  ||||||||| ||| ||||| |||| ||| ||||||||    
T  8382501 aagaaaaagacaaacttatagttgcattgaaaattgtgt--gagagaaaagttggagtatatattgagggtaaagttg 8382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 41790158 - 41790208
Alignment:
Q  216 ctttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  41790158 ctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgagaga 41790208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 1774085 - 1774130
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgt 258  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||    
T  1774085 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 1774130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 32661428 - 32661358
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||| ||  |||||||||| ||| |||||||||    
T  32661428 aagacaaacttaaagttgtattgaaaattgtgtga--gagaaaagttagagtatttattgagggtaaagttgg 32661358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 9304557 - 9304637
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||  |||||||||||||| ||| | |||  ||| ||||||| |||| |||||||||| |||||||||    
T  9304557 ttttaaaatgagtgtcattttagccaattgcacacataataagaaattgaataaaatagttaaatgtcatagcaattttac 9304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 17921171 - 17921107
Alignment:
Q  138 gctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||||||||| ||| |||||  ||| ||||||| ||||||||||||||| |||||||||    
T  17921171 gcttaagccaattgcacacatattaaggaattgaataaaatagtcaaatgtcatagcaattttac 17921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 26439116 - 26439051
Alignment:
Q  199 ttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||| || | ||||||||||| || ||  |||||||||||||||||||||| ||||||||||||    
T  26439116 ttactaaattatctttactttataacaaaaa--caaacttaaagttgcattgaaaattgtgtgagaga 26439051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 39970454 - 39970410
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  39970454 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaga 39970410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 8106807 - 8106858
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatg 169  Q
    ||||||||||||||||||||| ||||| |||||||| ||| |||||| ||||    
T  8106807 tccattttaaaatgagtatcgatttagtcaattgcacacaaattaaagaatg 8106858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 4530107 - 4530009
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    |||| ||||| ||| ||||||||| ||| |||||||||||||| |||||||||  ||| |||||| || ||| || |  |||| | |||||||||||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaagaaatagaataatgttgtccaaagatataatacttttactaaaata 4530009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 2813006 - 2812921
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||||||| | ||| |||||||||||||||||| ||||| |||| |||| || || |||   | ||||||| ||||||||||    
T  2813006 attttaaaatgaatgtcgttttagccaattgcatacaaattaagtaattgaatgaaataatcattagacataacacttttactaaa 2812921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 2067840 - 2067788
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgag 263  Q
    |||||||||||||| | ||||| || ||||||||||||| ||| |||||||||    
T  2067840 ccttactttataaggaaaagaccaaattaaagttgcattaaaaattgtgtgag 2067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 29025676 - 29025752
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| ||||  |||||||| ||| |||||  ||| ||||||||||  ||||||||||| |||||||||    
T  29025676 aaaatgagtgtcgttttaatcaattgcacacatattaaggaatagaataaagtacacaaatgtcatagcaattttac 29025752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 42329462 - 42329648
Alignment:
Q  117 atccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttac 216  Q
    |||| ||| |||||||||||||||||| ||||||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  42329462 atccgtttcaaaatgagtatcgctttaaccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaccttac 42329561  T
Q  217 tttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  42329562 tttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaag 42329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 27652230 - 27652419
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    ||||||||||| ||||||||||||| ||||||||| ||||| || |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  27652230 ttacttcatccgttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaata 27652329  T
Q  210 accttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||| | |||||||| ||| ||||||||    
T  27652330 accttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 29653420 - 29653616
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||| | ||||||||||||||||| ||| ||||||||||||||||| ||||||| |||| |||||| ||||||||||||||| |||||||||||||    
T  29653420 atattactccctccattttaaaatgagtgtcgttttagccaattgcatacggattaaagaatgaaataaaatagtcaaatgtcatagcaattttactaaa 29653519  T
Q  207 ataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||||||| ||  |||||||||| ||| ||||||||||||    
T  29653520 ataacgttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaag 29653616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 793531 - 793708
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    |||||||||  || |||||||||||||| ||| |||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  793531 aaaatgagtgccgttttagccaattgcacacaaattaaggaatggaataaagtagtccaatgtcatagcaattttactaaaataaccttactttataaga 793630  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||| || |||||||||    
T  793631 acaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaag 793708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 33822428 - 33822601
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||| ||||| |||| ||||||||| ||||||||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  33822428 aaaatgaatatcgttttaaccaattgcacacagattaattaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataaga 33822527  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | | ||||||||    
T  33822528 acaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttg 33822601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 33584898 - 33585077
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||| ||| |||||||| |||||||||  | ||||||  || |||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  33584898 ttttaaaataagtgtcgctttaaccaattgca--cggattaagaaacggaataaaatagtcaaatgtcataacaattttactaaaataaccttactttac 33584995  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | |||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||||| | | ||||||||||||    
T  33584996 atgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaaagttggaag 33585077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 284
Target Start/End: Original strand, 36296055 - 36296217
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||||||||||| |  ||||||| |||| |||||| || |||||||| ||| |||||||||||||||||||||| |||||    
T  36296055 ttttaaaatgagtgtcgctttagccaattgcacatggattaaagaatgaaataaaataatcaaatgtaatagcaattttactaaaataaccttaatttat 36296154  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtattta 284  Q
    | |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||| ||||    
T  36296155 aggaacaagacaaacttaaagttgcattgaaaattgtgtgagcgagaaaagttggagtgttta 36296217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 4833555 - 4833735
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||||||||||| |||||||||||||||||| | |  ||||  |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  4833555 tccattttaaaatgagtgtcgctttagccaattgcacatatgttaaggaatgaaataaagtagttaaatgtcataacaattttactaaaataaccttact 4833654  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |      || |||||||||||||||||||||||||| |||||||| |||||||| ||  |||||||||| ||| ||||||||||||    
T  4833655 t-----aaaaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaag 4833735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 29044956 - 29044770
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||| ||||||||||||| | | |||||| ||||||||  | || ||||||  ||| ||||||||||     ||||||||||||||||||||||||||    
T  29044956 tacttcctccattttaaaataaatgtcgcttcagccaattatacacggattaaggaatagaataaagta-----atgtcataacaattttactaaaataa 29044862  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
     ||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||| ||  || ||||||| ||||||||||||||||    
T  29044861 tcttactttataagaataagataaacttaaagttgcattgaaaattgtgtg-gagagaaaagtttgagcatttattgaggataaagttggaag 29044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 298
Target Start/End: Original strand, 32962930 - 32963106
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 220  Q
    |||||||||||||| |||||||| | ||||||| ||||||||| ||||| |||| ||||||||| ||||||| || ||||| ||||||||| ||||||||    
T  32962930 attttaaaatgagtgtcgctttaactaattgcacacagattaattaatgaaatagagtagtcaattgtcatagcagttttattaaaataactttacttta 32963029  T
Q  221 taagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagtt 298  Q
    |||||| |||||||||||||| |||||||| || |||| ||| | |||||| ||  |||||||||| ||| |||||||    
T  32963030 taagaaaaagacaaacttaaa-ttgcattggaaattgtttgaaaaagaaaagttagagtatttattgagggtaaagtt 32963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 122 - 302
Target Start/End: Complemental strand, 34171386 - 34171215
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| |||||| |||||||  | ||||||  ||||||||       ||||||||||||  |||||||||||||||||||||||||||    
T  34171386 ttttaaaatgagtgtcgttttagcaaattgcaggcggattaaggaatggaat-------tcaaatgtcatagaaattttactaaaataaccttactttat 34171294  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaa 302  Q
    |||||||||||||||||||||||||||||||| || |||  ||||||||| ||  |||||||||| | | |||||||||||    
T  34171293 aagaacaagacaaacttaaagttgcattgaaaattctgt--gagagaaaagtttgagtatttattgaaggtaaagttggaa 34171215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 303
Target Start/End: Complemental strand, 36660672 - 36660478
Alignment:
Q  105 atatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttacta 204  Q
    |||||||||| | ||  ||| ||||||||| |||||||||| ||||||| |||||||||  |||| ||| || || |||   | ||||||| ||||||||    
T  36660672 atatattactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttacta 36660573  T
Q  205 aaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||  |||||||||||||||| |||||||||||||||||| ||  ||| ||||    |||||||||  || |||||||||| ||| ||||||||||||    
T  36660572 aaatgtccttactttataagaaaaagacaaacttaaagttgtataaaaaattgt----gagagaaaagctggagtatttattgagggtaaagttggaag 36660478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 36783596 - 36783406
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||   ||| ||| || || |||   | ||||||| |||||||||| |      
T  36783596 tacttcctccgtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgc 36783497  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||  || ||| |||||||| ||||||||||||||||| ||||||||  ||||||| ||| || ||||| ||||| ||||||| ||||    
T  36783496 ccttacttgttatgaaaaagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggagaatttactaagggtaaagttagaag 36783406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 34972573 - 34972653
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||||||||||||| || |||||||||    
T  34972573 ttttaaaatgagtgtcgctttagccaattgcacacagattaataaatggaataaagtagtcaaatgtcgtatcaattttac 34972653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 43257784 - 43257925
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| | | |||||||||||||| |||||||||| |||| ||| || || |||   | ||||||| || ||||||| |  |||||||||||    
T  43257784 ttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgcccttactttat 43257882  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||||  ||||||||||||||||||||||||| ||||||||||    
T  43257883 aagaaatagacaaacttaaagttgcattgaaaattgtgtgaga 43257925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 8336326 - 8336410
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||||||| ||| ||||||||||| || | | |||||  |||||||||||||||||||||||||||||||||||||    
T  8336326 tccattttaaaatgagtgtcgttttagccaattacacaaatattaaggaatggaataaagtagtcaaatgtcataacaattttac 8336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 42103990 - 42104066
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  42103990 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 42104066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 2729698 - 2729789
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| ||||||| | ||||||||||||||||||||||||||||  |||| ||||||||||||||| |||||| |||||||||    
T  2729698 tactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatgaaataaagtagtcaaacgtcatagcaattttac 2729789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 166576 - 166751
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||| ||||||||||||| |||||||||  |||| ||| || || |||   |  |||||| |||||||||| |  ||||   ||||| ||    
T  166576 aaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtattatatga 166675  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | |||||||||||||||||||||||||| ||||||  |||| |||| ||| |||||||||| ||| ||||||||||||    
T  166676 aaaagacaaacttaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 166751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 4751453 - 4751632
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| |||||||||||||| ||| |||||  |||| ||| || || |||   | ||||||| ||||||||||  | ||||  |||||    
T  4751453 ttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgttttat 4751552  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | ||| || ||||||||||||||| ||||||| ||||||  |||| |||| ||| |||||||||| ||| ||||||||||||    
T  4751553 atgaaaaaaacaaacttaaagttgaattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 4751632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 34919961 - 34919847
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||||||||||||||||||| || |||||||||  |||| |||||| || |||   | |||| ||||||||||||| |  |||||||||||||||    
T  34919961 aaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttataaga 34919862  T
Q  226 acaagacaaacttaa 240  Q
    | |||||||||||||    
T  34919861 aaaagacaaacttaa 34919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 26660984 - 26660904
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| |||||||||||||||||| ||| |||||  |||| |||||||| ||||||||||||| |||||||||    
T  26660984 ttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26660904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 26932577 - 26932497
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| |||||||||||||||||| ||| |||||  |||| |||||||| ||||||||||||| |||||||||    
T  26932577 ttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26932497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 39566417 - 39566333
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| ||||||||| |||||||| |||||| || ||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  39566417 tccatttcaaaatgagtgtcgctttaaccaattacacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 39566333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 39730176 - 39730096
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| ||||| |||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  39730176 ttttaaaatgagtgtcgttttaggcaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 39730096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 42661867 - 42661943
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  |||| |||||| |||||||||||||||||||||||||    
T  42661867 aaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 42661943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 14620405 - 14620496
Alignment:
Q  111 tacttcatccattttaaa-atgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    |||||||||| ||| ||| |||||| |||||||||||||||||| ||| |||||  ||| ||||||||||||||||||||||| ||||||||    
T  14620405 tacttcatccgtttcaaatatgagtgtcgctttagccaattgcacacatattaaggaatagaataaagtagtcaaatgtcatagcaatttta 14620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 39504966 - 39504875
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||||||||||||| ||||||||| ||||| | |||| |||||| |||| ||||||||||| ||||||| ||||||||||||    
T  39504966 tactccatccgttttaaaatgagtgtcgctttagtcaattacgtacatattaaagaatgaaataaagtagtaaaatgtcgtaacaattttac 39504875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 4742189 - 4742368
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| ||||| |||||||| ||| |||||  |||| ||| || || |||   | ||||||| ||||||||||  | ||||  |||||    
T  4742189 ttttaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgttttat 4742288  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | ||| || ||||||||||||||| ||||||| ||||||  |||| |||| ||| |||||||||| ||| ||||||||||||    
T  4742289 atgaaaaaaacaaacttaaagttgaattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 4742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 31557355 - 31557408
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  31557355 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 31557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 42977995 - 42978076
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||| ||||||| ||| ||||||||||| || |||||||||  |||| |||||||||||||||||||||| |||||||||    
T  42977995 attttagaatgagtgtcgttttagccaatttcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 21375577 - 21375653
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| || ||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||| |||||||||    
T  21375577 aaaatgagtgtcactttagccaattgcacaaagattaaagaatggaataaaatagtcaaatatcatagcaattttac 21375653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 39060044 - 39059856
Alignment:
Q  108 tattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaa 207  Q
    ||||||||| ||| ||| |||||||||||| ||||||||||||| | | |||||||  |||| |||||     |||   | ||||||| ||||||||||     
T  39060044 tattacttcttccgtttaaaaatgagtatcactttagccaattgtacatagattaaggaatgaaataa-----tcattagacataacacttttactaaac 39059950  T
Q  208 taaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    || ||||  |||||| ||| || ||||||||||||||||||||||| |||| |  |||| |||| ||| |||||||||| ||| ||||||| ||||    
T  39059949 tacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtat--gagaaaaaatttggagtatttattgagggtaaagttagaag 39059856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 31889860 - 31889805
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  31889860 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 31889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 12167537 - 12167678
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||| ||||||| ||| |||||  ||| |||| || || |||   | || |||| |||||||||| |  |||||||||||||||    
T  12167537 aaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttactttataaga 12167636  T
Q  226 acaagacaaacttaaagttgcattg-aaagttgtgtgagaga 266  Q
    | | | ||||||||||||||||||| ||| ||||||||||||    
T  12167637 aaaggtcaaacttaaagttgcattgaaaatttgtgtgagaga 12167678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 14006123 - 14006042
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||||||| | |||||||||||||||||| | |||||  |||| |||||||||||||||||||||| | |||||||    
T  14006123 atttcaaaatgagtgttgctttagccaattgcatatatattaaggaatgaaataaagtagtcaaatgtcatagctattttac 14006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 15400334 - 15400222
Alignment:
Q  190 ataacaattttactaaaataacctt-actttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    |||||| ||||||||||||  |||| |||||||||||| |||  |||||||||||| ||||| || |||| |  ||||||||| ||  |||||||||| |    
T  15400334 ataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattggaaattgtat--gagagaaaagtttgagtatttattga 15400237  T
Q  289 ggataaagttggaag 303  Q
    |||||||||||||||    
T  15400236 ggataaagttggaag 15400222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 15567147 - 15567048
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||| ||||||||| |||||||||||| || || |||||||||  |||| ||| |  ||||||||| ||||| |||||||||| ||||| |||||||    
T  15567147 tccatttcaaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatagccttact 15567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 14980042 - 14980111
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtg 259  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  14980042 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtg 14980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 27600628 - 27600555
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcat 191  Q
    ||||||||||||||||| || ||||||||||||| | ||| |||||  |||| |||||||||||||||| ||||    
T  27600628 tccattttaaaatgagtgtcactttagccaattgaacacatattaaggaatgaaataaagtagtcaaatatcat 27600555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 39335126 - 39335206
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||| | ||| ||||| |||||||||| | |||||  ||| ||||||||||||||||| |||||| ||||||||    
T  39335126 ttttaaaatgaatgtcgttttagtcaattgcatataaattaaggaattgaataaagtagtcaaatatcataataattttac 39335206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 4011658 - 4011725
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||| |||||||  ||||| |||||||||| |||| ||| ||||||||||||||||| ||||||||||    
T  4011658 tttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattgaaaattgtgtgaga 4011725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 6519207 - 6519128
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||| ||| |||||  |||| || ||| |||||  |||| ||||||||||| |||||||||||||||||||    
T  6519207 ttttaaaatgagtgtcgttttagttaattacacacatattaaggaatgaaataaagtagtaaaatgtcataacaatttta 6519128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 32690753 - 32690829
Alignment:
Q  221 taagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    |||||| ||||||||| |||||||||||||||| |  |||| ||||||||| |||||||||||||| ||  ||||||||    
T  32690753 taagaaaaagacaaacctaaagttgcattgaaaat--tgtgcgagagaaaagttgaagtatttattgagagtaaagttg 32690829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 38982168 - 38982244
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||||||||||||||||||||| |  |||| ||||||||| ||  |||||||||| ||| |||||||||    
T  38982168 aagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgagagaaaagtttgagtatttattgagggtaaagttgg 38982244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 28640206 - 28640136
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    |||||||||||||||||| ||||||| ||||  ||||||  ||| |||||||||||||| ||| |||||||||    
T  28640206 aagacaaacttaaagttgtattgaaaattgttcgagaga--aaagttgaagtatttattgagggtaaagttgg 28640136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 34445952 - 34446021
Alignment:
Q  123 tttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcata 192  Q
    |||||||||||| |||||||| ||||||||| | | |||||  |||| |||||||||||||||| |||||    
T  34445952 tttaaaatgagtgtcgctttaaccaattgcacatatattaaggaatgaaataaagtagtcaaatatcata 34446021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 3305936 - 3306012
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||| |||||||||   | |||||  |||| |||||||||||||||||||||| |||||||||    
T  3305936 aaaatgagtgtcgttttaaccaattgcacgtatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 3306012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 4967489 - 4967545
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaa 253  Q
    |||||||||| |  ||||||||||||| || |||||||| |||||||||||||||||    
T  4967489 ttttactaaactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaa 4967545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 7388190 - 7388257
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||||||||| |  ||||| |||||||||| |||| ||| ||||||||||||||||| ||||| ||||    
T  7388190 ttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgagaga 7388257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 8961047 - 8961101
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||| |||||||||| |||| ||| ||||||||||| ||||| ||||||||||||    
T  8961047 cttattttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgagaga 8961101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 12992176 - 12992114
Alignment:
Q  238 taaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaa 302  Q
    |||||||||||||||| |||||  |||||  ||| ||| |||||||||| |||||||||||||||    
T  12992176 taaagttgcattgaaaattgtgcaagaga--aaagttggagtatttattgaggataaagttggaa 12992114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 1513120 - 1513060
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    |||||||||| ||||  || |||||||||||||||| |||||| ||||| ||| |||||||    
T  1513120 ccttactttacaagagaaaaacaaacttaaagttgctttgaaaattgtgagagggagaaaa 1513060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 4425156 - 4425124
Alignment:
Q  170 gaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||||||||||||| |||||||||    
T  4425156 gaataaagtagtcaaatgtcataccaattttac 4425124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 13761948 - 13761880
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtca 190  Q
    ||||||||||| | ||| ||||| |||||||| | | |||||  |||||||||||||| ||||||||||    
T  13761948 ttttaaaatgaatgtcgttttagtcaattgcaaataaattaagaaatggaataaagtaatcaaatgtca 13761880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 17674304 - 17674264
Alignment:
Q  258 tgtgagagagaaaaattgaagtatttattaaggataaagtt 298  Q
    |||| ||||||||| |||||||||||||| |||||||||||    
T  17674304 tgtgtgagagaaaagttgaagtatttattgaggataaagtt 17674264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 29807241 - 29807317
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||| |||||||||||||| |||  || |||||  ||||||||||| ||||||||||| |||  ||||||||    
T  29807241 aaaataagtgtcgctttagccaatagcacgcatattaaggaatggaataaattagtcaaatgtaatagaaattttac 29807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 9e-67; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 24259850 - 24259658
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| | | |||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  24259850 tacttcatccgttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 24259751  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  24259750 ccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 24259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 110 - 303
Target Start/End: Complemental strand, 34124535 - 34124342
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    ||||||| ||| ||| ||||||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  34124535 ttacttcctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaata 34124436  T
Q  210 accttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||| ||| ||||||||||||    
T  34124435 accttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaag 34124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 17499641 - 17499822
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| ||||| |||||||| |||||||||  |||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  17499641 ttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaataacattactttat 17499740  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||| ||  |||||||||| ||| ||||||||||||    
T  17499741 aagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaag 17499822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 28116484 - 28116292
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||| ||||||||| || ||||| ||||||||| || ||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  28116484 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 28116385  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||| ||||||||||||||||| || ||||| ||||||| ||||||||| ||  |||||||||||||| ||||||||||||    
T  28116384 ccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaag 28116292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 45889806 - 45889610
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    ||||||||  |||| ||| ||||||||| ||| |||||||||||||| ||| |||||  |||| |||||||||||||||||| ||| |||||||||||||    
T  45889806 atattactctatccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgttatagcaattttactaaa 45889707  T
Q  207 ataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||| |||||| |||||    
T  45889706 ataaccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaag 45889610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 111 - 303
Target Start/End: Original strand, 51434170 - 51434362
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||| ||| ||||||||||| | |||||||| ||||||||||| | |||||  ||||||||||||||||||||| |||||||||||||| ||||||||    
T  51434170 tacttcctccgttttaaaatgaatgtcgctttaaccaattgcatatatattaaggaatggaataaagtagtcaaatttcataacaattttattaaaataa 51434269  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||||||| ||| ||||||| ||||    
T  51434270 ccttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaag 51434362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 126 - 303
Target Start/End: Complemental strand, 31941779 - 31941605
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||||||||||||| || ||   | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  31941779 aaaatgagtgtcgctttagccaattgcatgcaaat---agaatggaataaagtagtcaaatgtcatagcaattttattaaaataaccttactttataaga 31941683  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||||||||||| || |||||||||||| | ||| |||||||||| ||| ||||||||||||    
T  31941682 acaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaag 31941605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 47321373 - 47321192
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| |||||||||||||| |||||||||  ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  47321373 ttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttat 47321274  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| ||||||| |||||||||||||||||| ||||| ||| ||||||| ||  |||||||||| ||| ||||||||||||    
T  47321273 aagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaag 47321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 19282329 - 19282514
Alignment:
Q  117 atccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttac 216  Q
    |||| ||||||||||||  |||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19282329 atccgttttaaaatgagcgtcgctttagccaattgcacacggattaaggaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttac 19282428  T
Q  217 tttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||| ||||||||||||||||| ||| |||  || ||||||||||||||||| ||  |||||||||| | | ||||||||||||    
T  19282429 tttataa-aacaagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagtatttattgaaggtaaagttggaag 19282514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 126 - 267
Target Start/End: Complemental strand, 54234040 - 54233899
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||||||| |||||  |||||||||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  54234040 aaaatgagtgtcgctttagccaattgcatacaaattaagaaatggaataaagtactcaaatatcatatcaattttactaaaataagcttactttataaga 54233941  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagag 267  Q
    | |||||||||||||||||||||||||| |||||||||||||    
T  54233940 aaaagacaaacttaaagttgcattgaaaattgtgtgagagag 54233899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 4408105 - 4408282
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||| | |||||||| | ||||||| | | |||||  |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  4408105 aaaatgaatgtcgctttaactaattgcacataaattaaggaatgaaataaagtagtcaagtgtcataacaattttactaaaataaccttactatataaga 4408204  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | |||||||||||||| ||||||||||| ||||||||||||||||| ||  || ||||||| ||| |||||| |||||    
T  4408205 aaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaagtcggaag 4408282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 111 - 271
Target Start/End: Complemental strand, 55126736 - 55126576
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||||||||||| | ||| |||||||||||||| |  ||||||  |||| |||||||||||||||||||||| |||||||||||||||||    
T  55126736 tactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 55126637  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    |||||||||||||||| ||||||||||||||||||||  |||| ||||||  |||||||||    
T  55126636 ccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaa 55126576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 6462253 - 6462102
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||| ||||||||  ||| |||||||||||||| |||||||||  || | |||||||||||||||| ||||| |||||| ||||||||||    
T  6462253 tactccatccgtttcaaaatgagggtcgttttagccaattgcacacagattaagaaaagtaataaagtagtcaaatttcatagcaatttgactaaaataa 6462154  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtga 262  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtga 6462102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 271
Target Start/End: Original strand, 34534035 - 34534166
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaactt- 238  Q
    |||||| |||||||  ||||||||  ||| |||||||||| |||||||||||| ||||||||||||||||||| |  |||||||||| |||||||||||     
T  34534035 tttagctaattgcactcagattaaggaattgaataaagtaatcaaatgtcatagcaattttactaaaataacc-tcttttataagaaaaagacaaactta 34534133  T
Q  239 aaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    ||||||||||||||| |||||||| ||||||||    
T  34534134 aaagttgcattgaaaattgtgtgaaagagaaaa 34534166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 34360237 - 34360087
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctta 215  Q
    ||||||||| | ||||||| ||||||||| ||||||||| ||||||||  |||| ||| || || |||   |  |||||| |||||||||| |  |||||    
T  34360237 catccatttcagaatgagtgtcgctttagtcaattgcatccagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgccctta 34360138  T
Q  216 ctttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  34360137 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 34360087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 55548188 - 55548305
Alignment:
Q  166 aatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgt--gtgag 263  Q
    |||| |||||| ||||||||||| ||||||||||||||||||||  ||||||||||  ||  ||||||||||||||||||||||| || ||||  | |||    
T  55548188 aatgaaataaaatagtcaaatgttataacaattttactaaaatagtcttactttatttgacaaagacaaacttaaagttgcattggaaattgtgagagag 55548287  T
Q  264 agagaaaaattgaagtat 281  Q
    ||||||||||||||||||    
T  55548288 agagaaaaattgaagtat 55548305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 27653916 - 27653824
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  27653916 ttacttcatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 27653824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 52957721 - 52957797
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||    
T  52957721 aaaatgagtgtcgctttagccaattgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttac 52957797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 2728314 - 2728405
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| ||||||||| |||||||||||||||||| ||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  2728314 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 2728405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 30022293 - 30022115
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaa-atgtcataacaattttactaaaataaccttacttta 220  Q
    ||||||||||||| ||| |||||| ||||||| | |||||||  |||| |||||| || |||  || | |||||| |||||||||| || ||||  | ||    
T  30022293 ttttaaaatgagtgtcgttttagcaaattgcacatagattaaggaatgaaataaaataatcattatat-ataacacttttactaaacta-ccttcttgta 30022196  T
Q  221 taagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||| |||||||||| ||||||||||||||| ||||||||  ||||||| |||||||||||||| ||| ||||||||||||    
T  30022195 taagaaaaagacaaactcaaagttgcattgaaaattgtgtga--gagaaaagttgaagtatttattgagggtaaagttggaag 30022115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 299
Target Start/End: Complemental strand, 34096248 - 34096067
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctta 215  Q
    ||||| |||||| |||||| ||| ||||| |||||||| ||| |||||| |||| ||| || || |||   | | ||||| |||||||||| |  |||||    
T  34096248 catccgttttaagatgagtgtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgccctta 34096149  T
Q  216 ctttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||| |||  ||||| |||||||| ||| ||||||||    
T  34096148 ctttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgagaga-aaagtttgaa-tatttattgagggtaaagttg 34096067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 19849242 - 19849131
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaag 289  Q
    |||||| |||||||||| |  ||| |||||||||||| || ||||||||||||||||||||||| ||||||||  ||||||| ||| |||||||||| ||    
T  19849242 ataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattgag 19849145  T
Q  290 gataaagttggaag 303  Q
    | ||||||||||||    
T  19849144 ggtaaagttggaag 19849131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 1819809 - 1819712
Alignment:
Q  105 atatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| |||||| ||| ||||||||||| | ||||||||| |||||| | |||||||||| |||| |||||||||||||||||||||| |||||||||    
T  1819809 atatactacttcctccgttttaaaatgaatgtcgctttagtcaattgaacacagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 1819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 52847981 - 52848061
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| | | ||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  52847981 ttttaaaatgagtgttgttttagccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatagcaattttac 52848061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 18430230 - 18430139
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||| ||| ||| ||||||||| | |||||||||||||||| ||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  18430230 tacttcctccgtttcaaaatgagtgttgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 18430139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 38991679 - 38991770
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||| ||| ||||||||||||| ||| ||||| |||||||| |||||||||  |||| ||||||||||| ||||||||||||||||||||    
T  38991679 tacttcctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaagaaatgtaataaagtagttaaatgtcataacaattttac 38991770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 24941106 - 24941030
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||| ||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||    
T  24941106 aaaatgagtgtcgttttaaccaattgcacacatgttaaagaatggaataaagtagtcaaatgtcataacaattttac 24941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 29519436 - 29519532
Alignment:
Q  106 tatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| |||||||||| ||||||||||||| ||| ||||||||||| || ||| |||||  |||| |||||| ||||||||| |||||||||||||||    
T  29519436 tataatacttcatccgttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataaaatagtcaaatatcataacaattttac 29519532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 40345274 - 40345354
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||| | |||||||||||||||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  40345274 ttttaaaatgaatgtcgctttagccaattgcacacaaattaatgaatgaaataaagtagtcaaatgtcatatcaattttac 40345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 42672548 - 42672439
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| |||||||||| ||  | ||||||||||||| |||||||| ||||||||| ||||||| |||||| ||||||  || |||||||||||||| |    
T  42672548 cataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaagagag--aagttgaagtatttattga 42672451  T
Q  289 ggataaagttgg 300  Q
    || |||||||||    
T  42672450 gggtaaagttgg 42672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 39985043 - 39984968
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||| |||||||||||||||||||||| |||||  ||| ||||||| ||||||||||||||| ||||||||    
T  39985043 aaaatgagtgtcgctttagccaattgcatacatattaaggaattgaataaaatagtcaaatgtcatagcaatttta 39984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 45520451 - 45520563
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| |||||||||  |  |||||| ||||||||| |||||||||||||||||||||| ||| |||| |  ||||||||| ||  ||||||||| ||    
T  45520451 cataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaattgtat--gagagaaaagtttgagtatttatcaa 45520548  T
Q  289 ggataaagttggaag 303  Q
    |||||||||||||||    
T  45520549 ggataaagttggaag 45520563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 37445819 - 37445707
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| |||||||||| |  |||||||||||||||| |||||||| ||||||||||||| ||| || ||||| ||| |||| ||||| |||||||| |    
T  37445819 cataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaaga-aaaatttgaa-tatttattga 37445722  T
Q  289 ggataaagttggaag 303  Q
    || ||||||||||||    
T  37445721 gggtaaagttggaag 37445707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 15501147 - 15501224
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||| |||||||||| |  |||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||    
T  15501147 cataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagaga 15501224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 39671099 - 39671176
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||  ||||||||| || | |||||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  39671099 cataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagaga 39671176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 2493344 - 2493252
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||||| ||| ||||||||| ||| ||| |||||||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  2493344 ttactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 2493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 37654636 - 37654560
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||||||||||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  37654636 aaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 37654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 52732749 - 52732673
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||| |||||||||| |  |||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||    
T  52732749 ataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 52732673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 21045270 - 21045215
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  21045270 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 21045215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 28734824 - 28734749
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||| |||||||| ||||||||| | | |||||| ||| |||||||||||||||||||||||| |||||||    
T  28734824 aaaatgagtgtcgctttaaccaattgcacatatattaaagaattgaataaagtagtcaaatgtcataataatttta 28734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 53814413 - 53814504
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||||||||||||| ||| |||| ||||| ||| ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  53814413 tactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 53814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 56373491 - 56373582
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| ||||||||| || ||||||||||||| | ||| |||||  |||||||||||||||||||||||| || |||||||||    
T  56373491 tactccatccgtttcaaaatgagtgtcactttagccaattgaagacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 56373582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 36805377 - 36805518
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||| |||| | ||||||| |||||||||  |||| ||| || || |||   | ||||||| |||||||||| |  ||||| |||||    
T  36805377 ttttaaaatgagtgtcgtttta-ctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagtttat 36805475  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    | ||| |||||||||||||||||| ||||||| ||||||||||    
T  36805476 atgaaaaagacaaacttaaagttgtattgaaaattgtgtgaga 36805518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 56556205 - 56556346
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||| ||||||||| |||||||||  ||| |||| || |  | | |   ||||||| |||||||||| || |||| ||||||    
T  56556205 ttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaattgaatgaaatcattaga---cataacacttttactaaattatccttgctttat 56556301  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| || ||||||||||  || |||||||| ||||||||||||    
T  56556302 aagaaaaatacaaacttaacattacattgaaaattgtgtgagaga 56556346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 44855395 - 44855326
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||    
T  44855395 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 44855326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 49089694 - 49089609
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||||||||| ||| ||||  |||||||| ||| |||||  |||| ||||| |||||||||| |||||||||||||||||||    
T  49089694 attttaaaatgagtgtcgttttaatcaattgcacacatattaaggaatgaaataatgtagtcaaatatcataacaattttactaaa 49089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 51930727 - 51930658
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||    
T  51930727 ttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgtgtgagaga 51930658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 42605802 - 42605722
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||  ||| ||||| |||||||| |||||||||| |||  |||||| ||||||||||||||| |||||||||    
T  42605802 ttttaaaatgagcgtcgttttagtcaattgcacacagattaaagaataaaataaaatagtcaaatgtcatagcaattttac 42605722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 54042098 - 54042189
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcataca-gattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    |||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||||  ||||||||||| |||||||||||| || ||||||||    
T  54042098 tactccatccgttttaaaatgagtgtcgttttagccaattgcacacataattaagaaatggaataaaatagtcaaatgtcgtagcaatttta 54042189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 20448255 - 20448189
Alignment:
Q  136 tcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||||||||||| ||| |||||  ||| |||||||||||| |||||||||| |||||||||    
T  20448255 tcgctttagccaattgcacacatattaaggaattgaataaagtagttaaatgtcatagcaattttac 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 40010793 - 40010879
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||| ||||||||| ||| ||||| | ||| || ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  40010793 catccgtttcaaaatgagtgtcgttttagtccattacacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 40010879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 43421140 - 43421194
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||    
T  43421140 cttactttataagaaaaagacaaaattaaagttgcattgaatattgtgtgagaga 43421194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 19878874 - 19878798
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| | |||||||||||||||||  | |||||||  |||||||||||||| ||||||||| || |||||||||    
T  19878874 aaaatgaatgtcgctttagccaattgcgcagagattaaggaatggaataaagtaatcaaatgtcgtagcaattttac 19878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 29289923 - 29289995
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| ||||||||||| ||||||  ||||||||| |||||||||||||| ||| ||||||| ||||    
T  29289923 aagacaaacttaaaattgcattgaaaattgtgt--gagagaaaagttgaagtatttattgagg-taaagtttgaag 29289995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 44571792 - 44571872
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| || ||||| ||||||||| ||| |||||  |||| |||||| |||||||||||||||  ||||||||    
T  44571792 ttttaaaatgagtgtctctttaaccaattgcaaacatattaatgaatgaaataaaatagtcaaatgtcatagtaattttac 44571872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 50623314 - 50623235
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||| ||| ||||| ||||| || ||| |||||  |||| |||| ||||||||||||||||| ||||||||    
T  50623314 ttttaaaatgagtgtcgttttagtcaattacacacatattaaggaatgaaatagagtagtcaaatgtcatatcaatttta 50623235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 29370815 - 29370753
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| |||||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  29370815 tttagtcaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 29370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 31817200 - 31817270
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaag-acaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||||| ||  ||||| ||||||||||||||||| ||||||||||||    
T  31817200 ttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaaaattgtgtgagaga 31817270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 31987430 - 31987351
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||| ||||||||||||||||| || || ||||||  ||| ||| |||||||||| ||| ||||||||||||    
T  31987430 aagaaaaagacaaatttaaagttgcattgaaaattatgcgagaga--aaagttggagtatttattgagggtaaagttggaag 31987351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 54512159 - 54512105
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||||||| | |||||| ||||||||||||||||  ||||||||||||    
T  54512159 cttactttataagaaaatgacaaaattaaagttgcattgaacattgtgtgagaga 54512105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 11835235 - 11835187
Alignment:
Q  217 tttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  11835235 tttataagaa-aagataaacttaaagttgcattgaaaattgtgtgagaga 11835187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 32140979 - 32141056
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||| |||||||||| |  || ||||||||||  | ||||||||| |||| ||||||||||| ||||||||||||    
T  32140979 cataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaaattgtgtgagaga 32141056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 38761819 - 38761925
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| ||||||||||  | ||||||||||| |||  |||||| |||||||||| | |||||| ||||    ||||||||| ||| |||||||||| |    
T  38761819 cataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaattgt----gagagaaaagttggagtatttattga 38761914  T
Q  289 ggataaagttg 299  Q
    || ||||||||    
T  38761915 ggttaaagttg 38761925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 34316446 - 34316382
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtca 190  Q
    ||||||||| || ||||| ||||||||| |||||||||  |||| |||||| |||||||||||||    
T  34316446 aaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaatagtcaaatgtca 34316382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 45043519 - 45043595
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||| ||| ||||| |||||||| |||  ||||  |||| |||||||||||||||||||||| |||||||||    
T  45043519 aaaataagtgtcgttttagtcaattgcacacattttaaggaatgtaataaagtagtcaaatgtcatagcaattttac 45043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 49080408 - 49080484
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||| |||||||| ||||||||| ||| |||||  |||  ||||||||||||||||||||||  ||||||||    
T  49080408 aaaataagtgtcgctttatccaattgcacacatattaaggaataaaataaagtagtcaaatgtcatagtaattttac 49080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 303
Target Start/End: Complemental strand, 22212580 - 22212388
Alignment:
Q  109 attacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaat 208  Q
    |||||| ||||| |||||||||| || |||||||||||||||| | ||| |||||  |||| ||| || || |||   | ||||||| |||||| ||| |    
T  22212580 attactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaact 22212481  T
Q  209 aaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
      | ||  ||||||  || ||  |||||||||||||| ||||||| ||||||  |||| |||  ||| |||||||||| ||| ||||||||||||    
T  22212480 gcctttgttttatataaaaaactcaaacttaaagttgtattgaaaattgtgt--gagaaaaatgttggagtatttattgagggtaaagttggaag 22212388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 35928622 - 35928538
Alignment:
Q  215 actttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||| |||| ||||||||| ||||||||||| |||||    | |||||  ||| |||||||||| ||| ||||||||||||    
T  35928622 actttataagaaaaagataaacttaaaattgcattgaaaattgtg----aaagaaacgttgcagtatttattgagggtaaagttggaag 35928538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 30492855 - 30492778
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||||||||||||||||| |||  | ||||  |||||||| ||| |||||||||| ||| |||||||||    
T  30492855 aagaaaaagacaaacttaaagttgcattaaaaaat-tgtgcaagagaaaagttggagtatttattgagggtaaagttgg 30492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 38692516 - 38692472
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  38692516 aagaaaaagacaaaattaaagttgcattgaaaattgtgcgagaga 38692472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 50072377 - 50072341
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  50072377 aagacaaaattaaagttgcattgaaaattgtgtgaga 50072341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 9e-67; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 111 - 303
Target Start/End: Original strand, 54933115 - 54933307
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||||||||||||| |||||||||||||||||| | | |||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  54933115 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 54933214  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  54933215 ccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 54933307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 126 - 297
Target Start/End: Original strand, 25722386 - 25722557
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||| ||||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25722386 aaaataagtatcgatttagccaattgcacacagattaagaaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttacaaga 25722485  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagt 297  Q
    | |||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||    
T  25722486 ataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagt 25722557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 2988535 - 2988712
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||| |  ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2988535 aaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataaga 2988634  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||| ||| ||||||||||||    
T  2988635 acaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaag 2988712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 43687808 - 43687985
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||| ||| ||| ||||| |||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43687808 aaaataagtgtcgttttagtcaattgcacacggattaatgaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 43687907  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  43687908 acaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 43687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 126 - 303
Target Start/End: Complemental strand, 54261643 - 54261466
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||||||||| || |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54261643 aaaatgagtgtcgctttagccaattacacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 54261544  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | || ||||||||||||||| ||||||| ||||||||||||||||| ||  |||||||||| ||| ||||||||||||    
T  54261543 aaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaag 54261466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 20512417 - 20512598
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  20512417 ttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttat 20512516  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| || ||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| | | ||||||||||||    
T  20512517 aagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaag 20512598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 118 - 298
Target Start/End: Original strand, 42006979 - 42007159
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||||||||||| ||| ||||||||||||||||  ||||||| ||| ||||||| |||||| |||||||| ||||||| |||||||||||||| |    
T  42006979 tccattttaaaatgagtgtcgatttagccaattgcatatggattaaagaatagaataaaatagtcagatgtcatagcaatttttctaaaataaccttatt 42007078  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagtt 298  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||| |||| ||  ||||||||||||||||||||||    
T  42007079 ttataagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtt 42007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 53560896 - 53560715
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||| ||| ||| ||||||||||| |||||| |||||  |||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  53560896 ttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaataaagtagttaaatgtcataataattttactaaaataaccttactttat 53560797  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| ||||||| |||||||||||||||||| || |||||||||||||| ||  ||| |||||  ||||||||||||||||    
T  53560796 aagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaagttggaag 53560715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 126 - 303
Target Start/End: Complemental strand, 51381952 - 51381773
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||| |||||||| |||||||||  |||| |||||| ||||||||| ||||| || ||||||||||||||||||||||||||| |    
T  51381952 aaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaatagtcaaatatcatagcagttttactaaaataaccttactttataata 51381853  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgaga--gagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | |||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||  ||| ||||||| ||||    
T  51381852 aaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaag 51381773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 36541723 - 36541542
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||| |||||| || | | |||||  |||| |||||| ||||||||||| ||| ||||||||||||||| ||||| ||||||    
T  36541723 ttttaaaatgagtgtcgctttaaccaattacacatatattaaggaatgaaataaaatagtcaaatgttatagcaattttactaaaattaccttgctttat 36541624  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | ||||||||||||||||||||||||| |||| ||||||||||||||||| ||| | |||||||| ||| ||||||||||||    
T  36541623 aggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaagttggaag 36541542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 32303830 - 32304007
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||| |||| | ||| | | |||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32303830 aaaatgagtgtcgttttaactaatcgtacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataaga 32303929  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | ||| ||||||||||| || ||||||| |||||| |||||||||| ||  |||||||||| ||| ||||||||||||    
T  32303930 aaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaagttggaag 32304007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 43169570 - 43169385
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||| ||||| ||| ||| ||||| ||||| || | |||||||  |||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  43169570 tccatttcaaaattagtgtcgttttagtcaattacacaaagattaaggaatgaaataaagtagtcaaatgtcattgcagttttactaaaataaccttact 43169471  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||| |||| ||  |||||||||| | | ||||||| ||||    
T  43169470 ttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaag 43169385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 44645553 - 44645389
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa-ccttactttataagaacaagacaaactt 238  Q
    |||||| |||| || ||| |||||| |||| |||||||||||||||| ||||| ||||||| ||||||||| |||||||||||| ||| |||| ||||||    
T  44645553 tttagctaattacacacatattaaagaatgaaataaagtagtcaaatatcatagcaattttgctaaaataaaccttactttatatgaaaaagataaactt 44645454  T
Q  239 aaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||||| || ||| |||||||||| ||| |||||||||| ||| ||||||||||||    
T  44645453 aaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaag 44645389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 118 - 253
Target Start/End: Original strand, 52201843 - 52201978
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    |||||||||||||| || ||| ||||| |||||||| || ||||||  ||| ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  52201843 tccattttaaaatgcgtgtcgttttagtcaattgcacacggattaaggaatagaataaaatagttaaatgtcataataattttactaaaataaccttact 52201942  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaa 253  Q
    ||| | ||||||||||||||||| |||| |||||||    
T  52201943 ttaaaggaacaagacaaacttaatgttgtattgaaa 52201978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 121 - 266
Target Start/End: Original strand, 27483115 - 27483260
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 220  Q
    |||||||||||||| ||||||||||| |||||| ||| |||||  |||| ||| || || |||   | ||||||| |||||||||| |  ||||||||||    
T  27483115 attttaaaatgagtgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttacttta 27483214  T
Q  221 taagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||| |||||||||||||||||||||||||| || |||||||||    
T  27483215 taagaaaaagacaaacttaaagttgcattgaaaattatgtgagaga 27483260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 2567929 - 2568079
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctta 215  Q
    ||||| ||||||||||| | ||| |||||||||||||| | |||||||  ||| |||| || || |||   |  |||||| |||||| |||||  |||||    
T  2567929 catccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtcctta 2568028  T
Q  216 ctttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  2568029 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 2568079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 277
Target Start/End: Original strand, 2662413 - 2662570
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||||||||||| |||||||| || ||||||  ||||||||| |||  ||| || || |||   | ||||||| |||||||||| |  ||||| |    
T  2662413 tccattttaaaatgagtgtcgctttaacccattgca--cagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgcccttatt 2662510  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaa 277  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  2662511 ttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaaaagttgaa 2662570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 38364021 - 38363941
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||| |||||||||    
T  38364021 ttttaaaatgagtgtcgttttagccaattgcatacagattaaccaatggaataaagcagtcaaatgtcatagcaattttac 38363941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 47138210 - 47138115
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||| ||||| ||| ||||||||| || |||||| |||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||    
T  47138210 atattactccatccgtttcaaaatgagtgtcactttagtcaattgcacacatattaaataattgaataaagtagtcaaatgtcatagcaattttac 47138115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 47895250 - 47895344
Alignment:
Q  108 tattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| ||| |||||  |||| ||||||||||||| |||||||| |||||||||    
T  47895250 tattacttcctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcatatgtcatagcaattttac 47895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 10351936 - 10352057
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||  ||||||||| |||||| |||||||||||  |||  ||||||||| |||||| ||||| |||||| |||| ||||| |||| |||||    
T  10351936 ttttaaaatgagcgtcgctttagtcaattgtatacagattaagaaattaaataaagtaatcaaatatcatagcaatttcactacaataatcttattttat 10352035  T
Q  222 aagaacaagacaaacttaaagt 243  Q
    ||||| |||||||| |||||||    
T  10352036 aagaataagacaaatttaaagt 10352057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 45213641 - 45213722
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||||||| |||||||||||||||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  45213641 attttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 45213722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 83455 - 83346
Alignment:
Q  192 aacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaagga 291  Q
    |||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||| ||  ||||||||| ||  |||||||| | |||     
T  83455 aacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgt--gagagaaaagttagagtatttaatgaggg 83358  T
Q  292 taaagttggaag 303  Q
    ||||||||||||    
T  83357 taaagttggaag 83346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 33193955 - 33194031
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||||||||| |||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||    
T  33193955 aaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 33194031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 303
Target Start/End: Original strand, 647583 - 647694
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaag 289  Q
    |||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||| || |||   |||||||| ||  |||||||||| ||    
T  647583 ataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattctgt--aagagaaaagttagagtatttattgag 647680  T
Q  290 gataaagttggaag 303  Q
    | ||||||||||||    
T  647681 ggtaaagttggaag 647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 35239524 - 35239447
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  35239524 cataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagaga 35239447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 38165587 - 38165712
Alignment:
Q  125 taaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataag 224  Q
    |||||||||| ||| ||||| ||||||||||||||||||  |||| ||| || || |||     ||||||| |||||||||| |  ||||||||||||||    
T  38165587 taaaatgagtgtcgttttagtcaattgcatacagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataag 38165686  T
Q  225 aacaagacaaacttaaagttgcattg 250  Q
    || |||||||||||||||||||||||    
T  38165687 aaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 46363002 - 46363112
Alignment:
Q  191 taacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaagg 290  Q
    ||||| |||||||||| |  |||||||||||||||| || ||||| |||||||||||||| || ||||||  ||||||||| ||| |||||||||| |||    
T  46363002 taacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaaattgtgt--gagagaaaagttggagtatttattgagg 46363099  T
Q  291 ataaagttggaag 303  Q
     ||||||||||||    
T  46363100 gtaaagttggaag 46363112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 266
Target Start/End: Complemental strand, 25061934 - 25061781
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||| ||||||||| ||| ||||||| |||||| ||| |||||  |||| ||| || || |||   | ||||||| |||||||||| ||     
T  25061934 tactccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactac 25061835  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||| ||  |||||||||||||||||||||| |||| |||||||    
T  25061834 ccttactttataagaaaaa--caaacttaaagttgcattgaaaattgtatgagaga 25061781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 36729696 - 36729772
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||  ||| |||||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  36729696 aaaatgagcgtcgttttagccaattgcacacatattaagtaatggaataaagtagtcaaatatcataacaattttac 36729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 51398236 - 51398160
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| |||||||||  |||| ||||||||| |||||||| |||||||||||||    
T  51398236 aaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatcaaatgttataacaattttac 51398160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 1340865 - 1340996
Alignment:
Q  135 atcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaa 234  Q
    |||| |||||| ||||||| | |||||||| |||||||| || || | |   | ||||||| |||| ||||| |  | |||||||||||||| |||||||    
T  1340865 atcgttttagcaaattgcacatagattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaa 1340964  T
Q  235 acttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||||||||||| ||||||||||||    
T  1340965 acttaaagttgcattgaaaattgtgtgagaga 1340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 23525225 - 23525316
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||| ||| ||| || |||||| ||| |||||||||||||| ||| |||||  || ||||||||||||||||||||||||||||||||||    
T  23525225 tacttcctccgtttcaatatgagtgtcgttttagccaattgcacacatattaaggaagggaataaagtagtcaaatgtcataacaattttac 23525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 31853478 - 31853561
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||||| | |||||||| |||||||||   |||||||| |||| |||||| ||||||||||||||||||||||||    
T  31853478 tccattttaaaatgaatgtcgctttaaccaattgcacttagattaaagaatgaaataaaatagtcaaatgtcataacaatttta 31853561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 303
Target Start/End: Original strand, 37225593 - 37225697
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||  ||| ||   ||||||||| ||| |||||    
T  37225593 ttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga--aaagttagcgtatttattgagggtaaag 37225690  T
Q  297 ttggaag 303  Q
    |||||||    
T  37225691 ttggaag 37225697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 41850622 - 41850531
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| |||||||||  ||||||||| ||||||| ||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  41850622 tactccatccgtttcaaaatgagtggcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 41850531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 45391876 - 45391958
Alignment:
Q  120 cattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||||| ||| |||||||||||||  ||| |||||| || ||||||||||| |||||||||||| |||||||||    
T  45391876 cattttaaaatgagtgtcggtttagccaattgcgcacatattaaacaaaggaataaagtaatcaaatgtcatagcaattttac 45391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 26965506 - 26965575
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  26965506 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 26965575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 38457623 - 38457513
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| |||||||||| |  | ||||||||| |||| |||| ||||||||| ||||||||||| ||||||||  ||||||| ||| |||||||||| |    
T  38457623 cataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaaattgtgtga--gagaaaagttggagtatttattga 38457526  T
Q  289 ggataaagttgga 301  Q
    || ||||||||||    
T  38457525 gggtaaagttgga 38457513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 3152727 - 3152807
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| |||| ||||||||| ||| |||||  |||| ||||||||||||| ||||||||||||||||||    
T  3152727 ttttaaaatgagtgtcgttttaaccaattgcacacatattaaggaatgaaataaagtagtcagatgtcataacaattttac 3152807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 27027857 - 27027784
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||| ||| |||||||||||||||||||||| ||||    
T  27027857 aagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattaaggataaagtttgaag 27027784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 43580610 - 43580527
Alignment:
Q  219 tataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||| ||| |||||||| ||||||||||||||||| |||||||||| | |||| ||| |||||||||||||| ||||||||||||    
T  43580610 tatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgaga-aaaaaagttggagtatttattaagggtaaagttggaag 43580527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 27039490 - 27039382
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaa-gacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    |||||| |||||||||| |  ||||||||||||| || || |||||| ||||||||||||||||| |||||||  |||| ||| ||| ||||||||||||    
T  27039490 ataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaaaattgtgtg--agaggaaagttggagtatttattaa 27039393  T
Q  289 ggataaagttg 299  Q
    | |||||||||    
T  27039392 gaataaagttg 27039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 264
Target Start/End: Original strand, 44648337 - 44648476
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||| |||||||||||||| |||||||||  |||| ||| || || |||   | ||||||| |||||||||| |  | ||||||||| |||    
T  44648337 aaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcctttactttatgaga 44648436  T
Q  226 acaa-gacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    | || |||||||||||||||| ||||||| ||||||||||    
T  44648437 aaaaagacaaacttaaagttgaattgaaaattgtgtgaga 44648476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 44854475 - 44854365
Alignment:
Q  192 aacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaagga 291  Q
    |||| |||||||||| |  |||||||||||||||| || ||||||||||||||||||||||| ||||    ||||||||| ||| |||||||||| |||     
T  44854475 aacacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaattgt-actgagagaaaagttggagtatttattgaggg 44854377  T
Q  292 taaagttggaag 303  Q
    |||| |||||||    
T  44854376 taaaattggaag 44854365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 36771589 - 36771643
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  36771589 cttattttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 36771643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 45567034 - 45566949
Alignment:
Q  114 ttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| ||||||||||||| ||  |||||||||||||| | |||||||||   | |||||||||||||||||||||| |||||||||    
T  45567034 ttcatccgttttaaaatgagtgtcattttagccaattgcacatagattaaat---gtaataaagtagtcaaatgtcatagcaattttac 45566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 49470922 - 49470857
Alignment:
Q  221 taagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttatt 286  Q
    |||||| ||||||||||||||| |||||||||| |||||| |||||||||| ||| ||||||||||    
T  49470922 taagaataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttatt 49470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 2458234 - 2458158
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| || ||||||||||||||| ||| |||||  |||| ||||||||||| |||||||||| |||||||||    
T  2458234 aaaatgagtgtcactttagccaattgcacacatattaaggaatgcaataaagtagtaaaatgtcatagcaattttac 2458158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 39359146 - 39359070
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| ||||| |||||| ||| | |||||  |||| ||||||||||||||||||||||||||||||||    
T  39359146 aaaatgagtgtcgttttagtcaattgtatataaattaaggaatgaaataaagtagtcaaatgtcataacaattttac 39359070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 4392034 - 4391958
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||||||||||||||||||||| |  |||| ||||||||| ||| |||||||||| ||| |||||||||    
T  4392034 aagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgagagaaaagttggagtatttattgagggtaaagttgg 4391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 31290882 - 31291040
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||| | ||| ||||||||||||| ||| ||||||||||| || |||||||||  |||| ||| || || | |   | ||||||| ||||||||||    
T  31290882 atattactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaataattattagacataacacttttactaaa 31290981  T
Q  207 ataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
     |  | ||| ||||| |||| |||| ||||||||||||||| ||||| ||||||||||||    
T  31290982 ctgcctttattttattagaaaaaga-aaacttaaagttgcaatgaaaattgtgtgagaga 31291040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 34060020 - 34059953
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| || |||||||||||||||| |||||||  ||||||||||||||||| ||||| ||||||    
T  34060020 ttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattgaaaattgtgcgagaga 34059953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 49471004 - 49470926
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttt 200  Q
    ||||||||||||||||| ||||   ||||||| ||| |||||| ||| ||||||| ||||||||||||||| |||||||    
T  49471004 ttttaaaatgagtatcgttttaaataattgcacacaaattaaagaattgaataaaatagtcaaatgtcatagcaatttt 49470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 790227 - 790158
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||||| ||| |||| |||||||||||||| || ||||||||||||    
T  790227 ttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaaattgtgtgagaga 790158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 19552686 - 19552617
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||||| || ||||| ||||||||||||||||| || |||||||||    
T  19552686 ttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaaaattctgtgagaga 19552617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 30426266 - 30426323
Alignment:
Q  145 ccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||  ||||||||| ||||||||||||||||| |||||||||    
T  30426266 ccaattgcacacagattaaggaatggaatatagtagtcaaatgtcatagcaattttac 30426323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 253
Target Start/End: Complemental strand, 40049118 - 40048973
Alignment:
Q  108 tattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaa 207  Q
    ||||||| | ||| ||||||||| ||| |||||||||| | ||||| ||  |||||  |||||||| || || |||   | ||||||| ||||| ||||     
T  40049118 tattactccctccgttttaaaattagtgtcgctttagctatttgcacacgaattaaggaatggaatgaaataatcattagacataacacttttattaaat 40049019  T
Q  208 taaccttactttataagaacaagacaaacttaaagttgcattgaaa 253  Q
    |  | |||||||||||||| |||||||| |||||||||||||||||    
T  40049018 tgcctttactttataagaaaaagacaaatttaaagttgcattgaaa 40048973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 301
Target Start/End: Complemental strand, 5244719 - 5244638
Alignment:
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgga 301  Q
    ||||||||| || ||||||||||||||||||||||| |  |||  ||||||||||||  |||||||||| ||| ||||||||||    
T  5244719 ttataagaaaaaaacaaacttaaagttgcattgaaaataatgt--gagagaaaaattagagtatttattgagggtaaagttgga 5244638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 30431349 - 30431270
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||  |||||| | ||||| | |||||||  |||| ||||||||||||||||||||||||||||||||    
T  30431349 ttttaaaatgagtgtcattttagc-agttgcacatagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 30431270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 53200605 - 53200681
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||  | |||||| ||||| || | |||||||| |||| |||||||||||||||||||||| |||||||||    
T  53200605 aaaatgagtgccactttagtcaattacacaaagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 53200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 3000883 - 3000807
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||| ||||||||||||||||| ||||||||  ||||||| ||| |||||||||| ||| || ||||||    
T  3000883 aagaaaaagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattgagggtagagttgg 3000807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 35099389 - 35099465
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||||||||| ||||||||||| |  |||| ||||||||| ||  |||||||||||||| |||||||||    
T  35099389 aagaaaaagacaaacttaaaattgcattgaaaat--tgtgcgagagaaaagtttgagtatttattaagggtaaagttgg 35099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 36381329 - 36381372
Alignment:
Q  159 attaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  36381329 attaattaatggaataaagtagtcaaatgtcatagcaattttac 36381372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 16240706 - 16240662
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  16240706 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaga 16240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 41287420 - 41287496
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||||||||||||||| || ||| |||||  | ||  ||||||| ||||||||||||| |||||||||    
T  41287420 aaaatgagtgtcgctttagccaattacacacatattaaggattgagataaagtggtcaaatgtcatagcaattttac 41287496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 44676447 - 44676371
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| | | ||||||||||| || ||| |||||  ||| |||||||||||| |||||||||| |||||||||    
T  44676447 aaaatgagtgttgttttagccaattacacacatattaaggaatagaataaagtagttaaatgtcatagcaattttac 44676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 41287241 - 41287166
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    ||||||| |||||||||| |   |||| |||||| ||| ||  |||||||||||||||||||||| ||||||||||    
T  41287241 cataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgaga 41287166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 53716143 - 53716091
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||    
T  53716143 cttactttataagaaaaagacaa--ttaaagttgcattgaaaactgtgtgagaga 53716091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 35557691 - 35557753
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||| ||||| |||||||||  |||  ||||||||| |||||||||||| |||||||||    
T  35557691 tttagccatttgcacacagattaatgaattaaataaagtaatcaaatgtcatagcaattttac 35557753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 42940209 - 42940155
Alignment:
Q  121 attttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataa 175  Q
    |||||||||||||| ||||||||||||||| || ||||| |||  ||||||||||    
T  42940209 attttaaaatgagtgtcgctttagccaattacacacagactaaggaatggaataa 42940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 43599859 - 43599897
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  43599859 aagacaaacttaaagttgcattaaaaattgtgtgagaga 43599897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 43736861 - 43736922
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaa 252  Q
    |||||| |||||||||| ||  |||| |||||||||| |||| ||||||||||||||||||||    
T  43736861 ataacacttttactaaactactcttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 22414888 - 22414840
Alignment:
Q  217 tttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |||| ||||||||||||||||||||| |||||| |||||    
T  22414888 tttataagaa-aagagaaacttaaagttgcattgaaaattgtgtaagaga 22414840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 38277996 - 38277951
Alignment:
Q  108 tattacttcatccattttaaaatgagtatcgctttagccaattgca 153  Q
    ||||||| | ||||||||||||||||| ||| ||||||||||||||    
T  38277996 tattactccctccattttaaaatgagtgtcgttttagccaattgca 38277951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 38016600 - 38016524
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||  |||||||  ||||| || ||| |||||  |||| ||||||||||||||||||||||  ||||||||    
T  38016600 aaaatgagtcccgctttaatcaattacacacatattaaggaatgaaataaagtagtcaaatgtcatagtaattttac 38016524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 51482166 - 51482102
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaat 186  Q
    ||||||||||||| ||| ||||  ||||| || |||||||||  |||| ||||||||||||||||    
T  51482166 ttttaaaatgagtgtcgttttaaacaattacacacagattaaggaatgaaataaagtagtcaaat 51482102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 4e-66; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 104 - 303
Target Start/End: Original strand, 32345739 - 32345938
Alignment:
Q  104 tatatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttact 203  Q
    |||||| |||| | ||| ||| ||||||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  32345739 tatataatactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttact 32345838  T
Q  204 aaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  32345839 aaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 32345938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 39117411 - 39117591
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39117411 ttttaaaatgagtgtcgctttatccacttgcacacagattaaagaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 39117510  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||| ||| ||| ||||||||    
T  39117511 aagaataagacaaacttaaagttgcattgaaaattgtgtgagagag-aaaattggagtattcattgagggtaatgttggaag 39117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 36446992 - 36447173
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| | ||||||| |||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  36446992 ttttaaaatgagtgttgctttagacaattgcacacaaattaatgaatggaataaagtagtcaaatgtcatagcaattttactaaaataacattactttat 36447091  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||||    
T  36447092 aagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaag 36447173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 31416673 - 31416854
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||| | || ||||||| ||||||| ||  |||||  |||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  31416673 ttttaaaatgattgtcactttagctaattgcacacgaattaaggaatgaaataaagtaatcaaatgtcaaaacaattttactaaaataatcttattttat 31416772  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  31416773 aagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaag 31416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 26963722 - 26963530
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||| ||||||||| | |||||| ||| || || ||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  26963722 tactccatccgtttcaaaatgagtgttgctttaaccatttacacacaaattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataa 26963623  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||| |||||| ||| ||| ||||||||||||    
T  26963622 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaag 26963530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 126 - 303
Target Start/End: Complemental strand, 19906640 - 19906465
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||| |  ||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  19906640 aaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttatagga 19906541  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| ||| | |||||||| ||| ||||||||||||    
T  19906540 acaagacaaacttaaagttgcattgaaaat--tgtgagagagaaaagttggaatatttattgagggtaaagttggaag 19906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 122 - 299
Target Start/End: Complemental strand, 6522049 - 6521872
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||||||||||| ||| |||||  |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6522049 ttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataaccttactttat 6521950  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||| |||||||||||||| ||| ||||||| |||||||||||||  |||||  |||||||||| | | ||||||||    
T  6521949 aagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagtatttattgaaggtaaagttg 6521872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 171 - 303
Target Start/End: Original strand, 10684801 - 10684933
Alignment:
Q  171 aataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaa 270  Q
    |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  10684801 aataaaatagttaaatatcataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaa 10684900  T
Q  271 aattgaagtatttattaaggataaagttggaag 303  Q
    | ||  | |||||||||||| ||||||||||||    
T  10684901 agttttaatatttattaagggtaaagttggaag 10684933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 44453363 - 44453283
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44453363 ttttaaaatgagtgtcgttttagccaattgcatacagattaaagaatggaataaagtagtcaaatgtcataacaattttac 44453283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 23155372 - 23155463
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| |||||||||    
T  23155372 tactccatccgttttaaaatgagtatcgctttagccaattgcatacagattaaagaattgaataaagtagttaaatgtcatagcaattttac 23155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 36836231 - 36836110
Alignment:
Q  181 tcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagta 280  Q
    ||||| |||||| |||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||| || |||||||||||||||||| |||     
T  36836231 tcaaacgtcatatcaattttactaaaataacattactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtg 36836132  T
Q  281 tttattaaggataaagttggaag 303  Q
    |||| | ||| ||||||||||||    
T  36836131 tttactgagg-taaagttggaag 36836110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 303
Target Start/End: Original strand, 42043926 - 42044082
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaactta 239  Q
    |||||||||||||| || ||||||   ||  ||||||||||| |||||||| || ||||||||||||||||||| ||||||||        |||| ||||    
T  42043926 tttagccaattgcacacggattaagagataaaataaagtagttaaatgtcaaaataattttactaaaataacctaactttatat-------acaatctta 42044018  T
Q  240 aagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  42044019 aagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 42044082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 266
Target Start/End: Complemental strand, 42121783 - 42121628
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| |||||||||  |||| ||| || || |||   | |||| || |||||||||| | |    
T  42121783 tacttcctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactga 42121684  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||| |||| |||| | ||||||||||||||||||| |||| |||||||    
T  42121683 ccttactttattagaaaaagatacacttaaagttgcattgaaaattgtttgagaga 42121628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 29001523 - 29001629
Alignment:
Q  158 gattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttg 257  Q
    |||||| ||| ||||||||||||| |||| |||||  ||||||| |||||||| |||| |||||| |||||| ||||||||||||||||||||||| |||    
T  29001523 gattaagtaacggaataaagtagttaaatatcatagaaattttaataaaataatcttattttataggaacaaaacaaacttaaagttgcattgaaaattg 29001622  T
Q  258 tgtgaga 264  Q
    |||||||    
T  29001623 tgtgaga 29001629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 303
Target Start/End: Complemental strand, 30515156 - 30515024
Alignment:
Q  171 aataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaa 270  Q
    |||||| ||||| ||||| |||  ||||||| ||||||||||||||||| |||||| |||||||| ||||||||| ||| ||| |||| ||||||| |||    
T  30515156 aataaaatagtcgaatgttatagtaattttattaaaataaccttactttttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaa 30515057  T
Q  271 aattgaagtatttattaaggataaagttggaag 303  Q
    | ||| |||||||||| | | ||||||||||||    
T  30515056 agttggagtatttattgaaggtaaagttggaag 30515024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 286
Target Start/End: Complemental strand, 34733472 - 34733379
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttatt 286  Q
    ||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||    ||||||||||||| ||||||||||    
T  34733472 cataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgt----gagagaaaaattggagtatttatt 34733379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 35778049 - 35777969
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||||||||||||||||| ||||||| ||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  35778049 ttttaaaatgagtatcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 35777969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 303
Target Start/End: Complemental strand, 17869449 - 17869288
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaactta 239  Q
    ||||| |||||||| |||||||||  |||| ||| || || |||   | ||||||| ||||| |||| |  | |||||||||||||| || |||||||||    
T  17869449 tttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtctttactttataagaaaaatacaaactta 17869350  T
Q  240 aagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| |||||||||||| ||| |||| |||||||||| ||||||||||||||||    
T  17869349 aagttgcattgaaaattgtgtgagaga-aaagattg-agtatttattgaggataaagttggaag 17869288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 42879840 - 42879935
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||| | |||| |||||||||||||| |||||||||||||||||| ||||| |||  ||||||||||||||| ||||||||||| |||||||||    
T  42879840 atattattccatctattttaaaatgagtgtcgctttagccaattgcacacagagtaaggaatggaataaagtaggcaaatgtcatagcaattttac 42879935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 42259476 - 42259651
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||| |||||||||||| || ||||||| |||| ||| |  || | |   | ||||||| ||||||||||||  |||||||||||||||    
T  42259476 aaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacacttttactaaaatgcccttactttataaga 42259575  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | ||||||| |||||||||||||||||| || |||  |||| |||| ||  |||||||||| ||| ||||||||||||    
T  42259576 aaaagacaagcttaaagttgcattgaaaattatgt--gagacaaaagtttgagtatttattgagggtaaagttggaag 42259651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 16564724 - 16564801
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattt 199  Q
    ||||||||||||| |||||||| |||||||||||||||||||  |||| |||||||||||||||||||||| ||||||    
T  16564724 ttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16564801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 16600938 - 16600861
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattt 199  Q
    ||||||||||||| |||||||| |||||||||||||||||||  |||| |||||||||||||||||||||| ||||||    
T  16600938 ttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16600861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 48684953 - 48684860
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctta 215  Q
    ||||||||||||| ||||||||  |||||||| |||||||||  |||| |||||||||||||||||||||||||||||||| ||| || |||||    
T  48684953 ttttaaaatgagtgtcgctttaatcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttaccaaattatcctta 48684860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 1103644 - 1103535
Alignment:
Q  192 aacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaagga 291  Q
    |||| |||||||||| || ||||||||||||| || || ||||| |||||||| |||||||| ||||||||  ||||||| |||||||||||||| |||     
T  1103644 aacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaattgtgtga--gagaaaagttgaagtatttattgaggg 1103547  T
Q  292 taaagttggaag 303  Q
    ||||||||||||    
T  1103546 taaagttggaag 1103535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 1742217 - 1742141
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  1742217 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 1742141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 19276535 - 19276638
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||| ||||| ||| |||||||||||||||||| |||||||||  |||| | |||||||||||||||| ||| ||| |||||| |||||||||||||    
T  19276535 tccatttcaaaatcagtgtcgctttagccaattgcacacagattaaggaatgaagtaaagtagtcaaatgttatagcaa-tttacttaaataaccttact 19276633  T
Q  218 ttata 222  Q
    |||||    
T  19276634 ttata 19276638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 37815954 - 37815874
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| |||||||||||||| ||| |||||| ||||||||||| ||||||||||||||| |||||||||    
T  37815954 ttttaaaatgagtgtcgttttagccaattgcacacatattaaagaatggaataaaatagtcaaatgtcatagcaattttac 37815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 27936008 - 27935917
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| ||||||||| ||||||||||||| |||| |||||||||  ||| |||||||||||||||| ||||||||||||||||    
T  27936008 tactccatccgtttcaaaatgagtgtcgctttagccaactgcacacagattaaggaattgaataaagtagtcaaaagtcataacaattttac 27935917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 34002147 - 34002235
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||||  ||||||||| ||| |||||||||| ||| ||||||||||||    
T  34002147 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagagaaaagttggagtatttattgagggtaaagttggaag 34002235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 23935651 - 23935571
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| |||||||| ||||||| |  || |||||| ||||||||||||||||||||||||||| |||||||||    
T  23935651 ttttaaaatgagtgtcgctttacccaattgtacccacattaaagaatggaataaagtagtcaaatgtcatagcaattttac 23935571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 27947410 - 27947506
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    ||||| ||||| ||| ||||||||| || ||||| ||||||||| ||| |||||  ||| ||||||||||||||||||||||| |||||||||||||    
T  27947410 ttactccatccgtttcaaaatgagtgtcactttaaccaattgcacacatattaatgaattgaataaagtagtcaaatgtcatagcaattttactaaa 27947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 29530856 - 29530936
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| |||||||||||||| |||||||||  |||  |||||||||||||||||||||| |||||||||    
T  29530856 ttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaataaagtagtcaaatgtcatagcaattttac 29530936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 19277055 - 19277110
Alignment:
Q  209 aaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  19277055 aaccttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 303
Target Start/End: Original strand, 41905933 - 41906036
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| ||||||   |||||||| ||| |||||||||| ||| |||||    
T  41905933 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--aagagaaaagttggagtatttattgagg-taaag 41906029  T
Q  297 ttggaag 303  Q
    |||||||    
T  41906030 ttggaag 41906036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 7795152 - 7795244
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||||| ||| ||||||||| |||||||||||||||| | ||| |||||  |||| ||||||||||| |||||||||| |||||||||    
T  7795152 ttactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaataaagtagtaaaatgtcatagcaattttac 7795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 8334209 - 8334293
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttt 200  Q
    ||||| ||||||| || || ||| ||| |||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||    
T  8334209 catccgttttaaattgtgtgtcgttttcgccaattgcacacagattaagaaatgtaataaagtagtcaaatgtcataacaatttt 8334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 45933510 - 45933589
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||| |||||||||||| ||||| |||||||||  ||| ||||||| ||||||||| ||||| ||||||||    
T  45933510 ttttaaaatgagtgtcgctttagccacttgcacacagattaaggaattgaataaaatagtcaaatatcatagcaatttta 45933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 22627368 - 22627421
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||||    
T  22627368 ttactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 22627421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 28044139 - 28044208
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  28044139 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgtgtgagaga 28044208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 10599593 - 10599513
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| ||||  |||||||| | | |||||  ||||||||||||||||||||||||||| |||||||||    
T  10599593 ttttaaaatgagtgtcgttttaatcaattgcacatatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 10599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 13405048 - 13405128
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| |||| ||||||||| ||| |||||  |||| ||||||||||||||||||| || |||||||||    
T  13405048 ttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaatgaaataaagtagtcaaatgtcgtagcaattttac 13405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 40298977 - 40298901
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| ||||||||||||||||| |||||||| ||||||||  ||||||| ||| |||||||||| ||| |||||||||    
T  40298977 aagaaaaagacaaacttaaagttacattgaaaattgtgtga--gagaaaagttggagtatttattgagggtaaagttgg 40298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 24680352 - 24680278
Alignment:
Q  128 aatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| ||| |||||| ||||||| | | |||||  |||| ||||||||||||||||||||||||||||||||    
T  24680352 aatgagtgtcgttttagctaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 24680278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 303
Target Start/End: Original strand, 3680879 - 3681025
Alignment:
Q  155 acagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaag 254  Q
    |||||||||| |||||||| || || |||   | ||||| | |||||||||| |   ||||||||||||||| |||||||| ||||||||||||| |||     
T  3680879 acagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaaa 3680978  T
Q  255 ttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    || |||||||||  ||| ||   ||||||||||| | ||||||||||||    
T  3680979 ttctgtgagaga--aaagttagtgtatttattaatggtaaagttggaag 3681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 18886800 - 18886735
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtga 262  Q
    |||||||||| |  |||||||||||||| | |||||||| ||||||||||||||||| ||||||||    
T  18886800 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtga 18886735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 22298227 - 22298146
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataa-----agtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||||||||||||| |||||||||  ||||||||||     ||||||||||||||||| |||||||||    
T  22298227 aaaatgagtgtcgttttagccaattgcacacagattaaggaatggaataaagtaaagtagtcaaatgtcatagcaattttac 22298146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 31418434 - 31418511
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattt 199  Q
    ||||||||| ||| ||||||||  |||||||| | | |||||  ||||||||||||||||||||||||||| ||||||    
T  31418434 ttttaaaataagtgtcgctttaatcaattgcacatatattaagaaatggaataaagtagtcaaatgtcatagcaattt 31418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 36808142 - 36808085
Alignment:
Q  144 gccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    |||||||||||||| |||||| |||  |||||||||||||||||||||| ||||||||    
T  36808142 gccaattgcatacatattaaagaatataataaagtagtcaaatgtcatagcaatttta 36808085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 40207381 - 40207450
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtg 259  Q
    |||||| |||||||||| |  |||||||||||||||| | |||||||||||| ||||||||||| |||||    
T  40207381 ataacacttttactaaactgcccttactttataagaaaatgacaaacttaaaattgcattgaaaattgtg 40207450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 42010573 - 42010642
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||| |  ||||| |||||||||| ||||||||||||||||| |||||||| |||| |||||||    
T  42010573 ttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaattgtatgagaga 42010642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 286
Target Start/End: Complemental strand, 47272314 - 47272219
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttatt 286  Q
    |||||||||||||||||| |  ||||  |||||| ||| ||||||||| |||| ||||||||||| ||||||||| || |||| ||||||||||||||    
T  47272314 cataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag-ga-aaaagttgaagtatttatt 47272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 18733579 - 18733506
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||| ||||||||||||||||||||||||  |||| |||||||| |||||||||| ||| || |||| ||||    
T  18733579 aagacaaatttaaagttgcattgaaagttgtgt--gagaaaaaaattggagtatttattgagggtagagttcgaag 18733506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 266
Target Start/End: Original strand, 33056200 - 33056352
Alignment:
Q  115 tcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctt 214  Q
    |||||| ||| ||||||||| ||| ||||| |||||||| | |||||||  |||| ||| || || |||     ||||||| |||||||||| |  ||||    
T  33056200 tcatccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgccctt 33056299  T
Q  215 actttat-aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||| ||||| |||||||| |||||  |||||||||| ||||||||||||    
T  33056300 actttattaagaaaaagacaaatttaaaactgcattgaaaattgtgtgagaga 33056352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 41137954 - 41137878
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||  |||||  ||||||| | | |||||| ||||||||||||||||||||||||||| |||||||||    
T  41137954 aaaatgagtgtcattttagtgaattgcacatatattaaaaaatggaataaagtagtcaaatgtcatagcaattttac 41137878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 5723126 - 5723058
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagtt 298  Q
    |||||||||||||||||||||||||| ||||||||  ||||||| ||  |||||||||| ||| |||||||    
T  5723126 aagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatttattgagggtaaagtt 5723058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 45948545 - 45948631
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||||||||||||| ||| ||||| ||||  || ||| ||||   ||| ||||||||||||||||||||||| |||||||||    
T  45948545 catccgttttaaaatgagtgtcgttttagtcaatcacacacatattacgaaatagaataaagtagtcaaatgtcatagcaattttac 45948631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 32275334 - 32275285
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtga 262  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||||||||    
T  32275334 ttactttataagaaaaaatcaaacttaaagttgcattgaaaattgtgtga 32275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 33845433 - 33845509
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||||||||||||||||||||| |  |||| |||| |||| ||| |||| ||||| ||| |||||||||    
T  33845433 aagaaaaagacaaacttaaagttgcattgaaaat--tgtgcgagaaaaaagttggagtaattattgagggtaaagttgg 33845509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 36915599 - 36915504
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||||||| ||| |||||||| || || | |||||||  |||| ||| |  ||||||||| ||||| |||||||||| ||||| |||||||    
T  36915599 ttttaaaatgagtgtcgttttagccattttcacatagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatagccttact 36915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 48838714 - 48838752
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  48838714 aagacaaatttaaagttgcattgaaaattgtgtgagaga 48838752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 36447625 - 36447678
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||| |||| ||| ||||||||| ||||||| || |||||||||    
T  36447625 ttactttataagaaaaagataaaattaaagttgaattgaaaattatgtgagaga 36447678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 40339703 - 40339647
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaa 163  Q
    |||||||| ||||| |||||||||  || ||| |||||||||||||| |||||||||    
T  40339703 atattactccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaa 40339647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 70376 - 70557
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||||| || |||||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  70376 ttttaaaatgagtgtcgctataaccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatgacaattttactaaaataaccttactttat 70475  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| || ||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  70476 aagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 70557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 25332801 - 25332620
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||| ||||||| |||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25332801 ttttaaaatgagtgtcgctttagctaattgcacacagattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttat 25332702  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||||| ||||| ||||||| |||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  25332701 aagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagttggaag 25332620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 775807 - 775988
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||| | ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  775807 ttttaaaatgaatgtcgctttagccaattgcatacagattaaggaatagaataaagtagtcaaatgtcataacaattttactaaaataaccttaatttat 775906  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||| ||||| ||  |||||||||| ||| ||||||| ||||    
T  775907 aagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagttagaag 775988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 104 - 271
Target Start/End: Complemental strand, 14698237 - 14698070
Alignment:
Q  104 tatatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttact 203  Q
    ||||||||||| | | | ||| ||||||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||| ||||||||||    
T  14698237 tatatattactcccttcgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcatagcaattttact 14698138  T
Q  204 aaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  14698137 aaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaa 14698070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 43388584 - 43388759
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43388584 aaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 43388683  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | || ||||||||||||||| ||||||| || |||  ||||||||| ||  |||||||||| ||| ||||||||||||    
T  43388684 aaaatacaaacttaaagttgtattgaaaattatgt--gagagaaaagtttgagtatttattgagggtaaagttggaag 43388759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 299
Target Start/End: Original strand, 4566044 - 4566221
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||||||||| ||||| || |||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  4566044 ttttaaaatgagtgtcgctttagtcaattacacacagattaaaaaatgtaataaaatagtcaaatatcataacaattttactaaaataaccttattttat 4566143  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||||||| ||| | | |||||| | ||||||||||    
T  4566144 aagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagttggactctttattgatgataaagttg 4566221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 33093598 - 33093418
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    |||| ||||||||||||||||||||||||| | || ||||||  |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  33093598 ttttcaaatgagtatcgctttagccaattgtacacggattaagaaatgaaataaagtagttaaatgtcataacaattttactaaa-taaccttactttat 33093500  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    || | ||||| ||||||||||||||||||||| ||||||||| ||||||| ||| | |||||||| ||| ||||||||||||    
T  33093499 aacatcaagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaag 33093418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 125 - 303
Target Start/End: Original strand, 39866596 - 39866775
Alignment:
Q  125 taaaatgagtatcgctttagccaatt-gcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataa 223  Q
    |||||||||| ||| |||| |||||| ||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  39866596 taaaatgagtgtcgttttaaccaatttgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttacaa 39866695  T
Q  224 gaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||| | |||||||||||||||| ||||||| |||||||||||| |||||||  |||||||||| | | ||||||||||||    
T  39866696 gaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaagttggaag 39866775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 104 - 303
Target Start/End: Original strand, 10580761 - 10580960
Alignment:
Q  104 tatatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttact 203  Q
    |||||||||||  || | ||| ||||||||||||| || ||||||||||| || ||| ||  ||||||||||| ||||||||| ||||  |||||||| |    
T  10580761 tatatattactcaattcgtttcaaaatgagtatcgtttaagccaattgcacacggatcaaggaatggaataaaatagtcaaatatcatcgcaattttatt 10580860  T
Q  204 aaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||  |||||||||| ||| ||||||||||||    
T  10580861 aaaataatcttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaag 10580960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 2459956 - 2459823
Alignment:
Q  170 gaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaa 269  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  2459956 gaataaagtagtcaaatatcatagcaattttactaaaacaaccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaa 2459857  T
Q  270 aaattgaagtatttattaaggataaagttggaag 303  Q
    || ||| |||||||||| ||| ||||||||||||    
T  2459856 aagttggagtatttattgagggtaaagttggaag 2459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 168 - 303
Target Start/End: Complemental strand, 41984603 - 41984468
Alignment:
Q  168 tggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagac-aaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||    
T  41984603 tggaataaa-tagtcaaatgtcatagcaattttactaaaataaccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgaga 41984505  T
Q  267 gaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| ||| |||||||||||| | ||||||||||||    
T  41984504 gaaaagttggagtatttattaaaggtaaagttggaag 41984468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 266
Target Start/End: Complemental strand, 34225986 - 34225835
Alignment:
Q  115 tcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctt 214  Q
    |||||| ||| ||||||||| |||||||||||||||||| | |||||||  |||| ||| || || |||   | ||||| |||||||||||| |  ||||    
T  34225986 tcatccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgccctt 34225887  T
Q  215 actttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  34225886 actttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 34225835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 38809932 - 38809833
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||  || |||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  38809932 tccatttcaaaatgagtatcgttttagccaattgcacacagattaaggaaaggaataaagtggtcaaatgtcatagcaattttactaaaatagccttact 38809833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 111 - 303
Target Start/End: Complemental strand, 7743641 - 7743451
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||| ||||||||| ||||||||||||||| || |||||||||| |||  ||| || || |||   |  |||||| |||||||||  |      
T  7743641 tactacatccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgc 7743542  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||||  ||||||| ||| | |||||||| ||| ||||||||||||    
T  7743541 ccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggactatttattgagggtaaagttggaag 7743451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 16807440 - 16807519
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||    
T  16807440 ttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16807519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 16846721 - 16846800
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||    
T  16846721 ttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16846800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 36360287 - 36360440
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||  || |||||| |||| ||| || || |||   | ||||||| |||||||||| |      
T  36360287 tacttcctccattttaaaatgagtgtcgctttagtcaattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaactgc 36360386  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||| ||||||||||    
T  36360387 ccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgtgaga 36360440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 11171905 - 11171792
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| |||||||||| || ||| |||||||  ||| ||||||||||||||||| ||||| || | ||| || |||||||||||||||||||||||||    
T  11171905 cataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattggaaatagtgagaaagagaaaaattgaagtatttattaa 11171806  T
Q  289 ggataaagttggaa 302  Q
     | |||||||||||    
T  11171805 tggtaaagttggaa 11171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 42743260 - 42743178
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||  |||| |||||||||||||||||||||| |||||||||    
T  42743260 tccattttaaaatgagtgtcgctttagccaattgca--cagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42743178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 4133248 - 4133172
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  4133248 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 4133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 25383397 - 25383488
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||  || |||||  ||||||||||||||||||||| ||||| |||||||||    
T  25383397 tactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaatggaataaagtagtcaaatatcatagcaattttac 25383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 37107023 - 37106912
Alignment:
Q  192 aacaattttactaaaataaccttactttataag--aacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaag 289  Q
    |||| |||||||||| |  ||||||||||||||  || |||| ||||||||||||||||||||| ||||||||  ||||||| ||| |||||||||||||    
T  37107023 aacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattaag 37106926  T
Q  290 gataaagttggaag 303  Q
    | ||||||||||||    
T  37106925 ggtaaagttggaag 37106912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 300
Target Start/End: Complemental strand, 24775436 - 24775242
Alignment:
Q  104 tatatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttact 203  Q
    |||||| |||| ||||| |||||| |||||| ||| ||||| |||||||| ||| |||||   || |||| || || |||   |  |||||| |||||||    
T  24775436 tatatactactccatccgttttaagatgagtgtcgttttagtcaattgcacacaaattaaggtattgaatgaaataatcattagatataacacttttact 24775337  T
Q  204 aaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    |||||   ||||||||||||||| || ||||||||||||||  ||||||| ||||||||  ||||||| |||||||||||||| ||| |||| ||||    
T  24775336 aaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtga--gagaaaagttgaagtatttattgagggtaaacttgg 24775242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 441158 - 441234
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  441158 aaaatgagtgtcgttttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 441234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 36106326 - 36106406
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| |||||||||| ||||||||||| |||||  |||| ||||||||||||||||||  ||||||||||||    
T  36106326 ttttaaaatgagtgtcgctttagcaaattgcatacatattaaggaatgaaataaagtagtcaaatgttctaacaattttac 36106406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 38926832 - 38926756
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||||||||| |||||||| ||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  38926832 aaaatgagtgtcgctttagtcaattgcacacatattaatgaatgaaataaagtagtcaaatgtcataacaattttac 38926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 1298778 - 1298877
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| || |||  ||||||||| ||| || ||||||| |||||||||    
T  1298778 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagagaaaagttggagaatttattgaggataaag 1298875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 40987205 - 40987347
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||||||||||  |||||| ||| |||||  |||| ||| || || |||   | ||||||| |||||||||| |  |||||||||||    
T  40987205 ttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattgtccttactttat 40987304  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    ||||| |||| ||| ||||||||||||||||| ||||| ||||    
T  40987305 aagaaaaagataaatttaaagttgcattgaaaattgtgagaga 40987347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 32227925 - 32228014
Alignment:
Q  113 cttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||| ||| ||||| || ||||||||||||||||||| ||| |||||  |||| ||||||||| ||||||||||||||||||||||    
T  32227925 cttcctccgtttcaaaataagcatcgctttagccaattgcacacaaattaaggaatgaaataaagtattcaaatgtcataacaattttac 32228014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 8774294 - 8774202
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||||| ||||||||||||| | | ||||| |||||||| ||| |||||  |||| |||||| |||||||||||||||||||||||||    
T  8774294 ttactccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaatgtaataaaatagtcaaatgtcataacaattttac 8774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 12342323 - 12342243
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| |||||||||||||| |   |||||  |||| ||||||||||||||||||||||||||||||||    
T  12342323 ttttaaaatgagtgtcgttttagccaattgcacatttattaaggaatgaaataaagtagtcaaatgtcataacaattttac 12342243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 14378171 - 14378315
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||| ||||||| |||| ||||  ||| |||| || || |||  |   |||||| |||||||||| |  |||||||||||    
T  14378171 ttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgcccttactttat 14378270  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| |||| ||| ||||||||||||||||| || || ||||||    
T  14378271 aagaaaaagataaatttaaagttgcattgaaaattatgcgagaga 14378315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 29396607 - 29396683
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||||||||||||| |||||||||  |||| ||||||||||||||||||| || |||||||||    
T  29396607 aaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29396683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 29809039 - 29808963
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  |||| ||||||||||||||||||| || |||||||||    
T  29809039 aaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29808963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 303
Target Start/End: Original strand, 4840725 - 4840829
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||||| |||||||| |||||||||||||||||  |||||  | ||||||| ||  |||||||||| ||| |||||    
T  4840725 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaactgtgt--gggagaaaagtttgagtatttattgagggtaaag 4840822  T
Q  297 ttggaag 303  Q
    |||||||    
T  4840823 ttggaag 4840829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 13562238 - 13562140
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||| | ||||||||||||||||| ||| ||| | |||||||| ||| |||||  ||||||| |||||||||||||||||| | ||||||||||||    
T  13562238 atattactccctccattttaaaatgagtgtcgtttttgtcaattgcacacatattaaggaatggaagaaagtagtcaaatgtcat-ataattttactaaa 13562140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 43344213 - 43344325
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||||||||| ||||  | |||||||||||||||| |||| ||  ||||||||| ||||||| || |||  ||||||||||||  ||||||||||||    
T  43344213 cataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgt--gagagaaaaattagagtatttattaa 43344310  T
Q  289 ggataaagttggaag 303  Q
     | ||||||||||||    
T  43344311 aggtaaagttggaag 43344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 303
Target Start/End: Complemental strand, 43460927 - 43460823
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||| || |||  ||||||||| |||||||||||||| ||| ||| |    
T  43460927 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatgt--gagagaaaagttgaagtatttattgagggtaacg 43460830  T
Q  297 ttggaag 303  Q
    |||||||    
T  43460829 ttggaag 43460823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 4766226 - 4766279
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  4766226 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 4766279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 12393829 - 12393922
Alignment:
Q  109 attacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||| | ||||||||||||| |||  ||||||| || |||||| ||| |||||| |||| ||||||||||| |||||||||| |||||||||    
T  12393829 attactccctccattttaaaatcagtgccgctttaaccgattgcacacatattaaaaaatgaaataaagtagttaaatgtcatagcaattttac 12393922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 8789341 - 8789433
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||||| ||| ||||||||| | | ||||| |||||||| ||| |||||  |||| |||||| |||||||||||||||||||||||||    
T  8789341 ttactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 8789433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 16316864 - 16316796
Alignment:
Q  196 attttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    ||||||||||| |  ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||    
T  16316864 attttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 16316796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 42753973 - 42753897
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| | ||||||||||||||| || ||| |||||| |||| |||||||||| ||||||||||| |||||||||    
T  42753973 aaaatgactgtcgctttagccaattacacacatattaaagaatgaaataaagtagacaaatgtcatagcaattttac 42753897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 40410583 - 40410528
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||    
T  40410583 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtcagaga 40410528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 30855331 - 30855255
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||| |||||||||  || |||||  ||| ||||||| |||||||||||| ||||||||||||    
T  30855331 aaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaaatagtcaaatgtcttaacaattttac 30855255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 1360306 - 1360230
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||| |||||||||||||||||||||||||| |||| |   |||||||| |||||||||||||| ||| |||| ||||    
T  1360306 aagaaaaagacaaacttaaagttgcattgaaaattgttt--aagagaaaagttgaagtatttattgagggtaaaattgg 1360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 1381901 - 1381826
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    ||||||| |||||||||| |   ||||||||||||||| |||| ||||||||| ||||||||||| ||||| ||||    
T  1381901 cataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgtgagaga 1381826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 29795140 - 29795262
Alignment:
Q  140 tttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaactta 239  Q
    ||||| ||||||||  ||||||||  |||||||| || || |||   | ||||| | |||||||||| |  ||||| |||||||||| |||||||  |||    
T  29795140 tttagtcaattgcacgcagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaacttta 29795239  T
Q  240 aagttgcattgaaagttgtgtga 262  Q
    |||||||||||||| ||||||||    
T  29795240 aagttgcattgaaaattgtgtga 29795262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 18717302 - 18717226
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| |||| ||| |||||| ||||||| ||||| |||  |||| ||||| ||||||||||| ||||||||||||||    
T  18717302 aaaaagagtgtcgttttagctaattgcacacagactaatgaatgaaataatgtagtcaaatgccataacaattttac 18717226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 201
Target Start/End: Complemental strand, 19636690 - 19636659
Alignment:
Q  170 gaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||||||||||||||||||||||    
T  19636690 gaataaagtagtcaaatgtcataacaatttta 19636659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 201
Target Start/End: Complemental strand, 19835283 - 19835252
Alignment:
Q  170 gaataaagtagtcaaatgtcataacaatttta 201  Q
    ||||||||||||||||||||||||||||||||    
T  19835283 gaataaagtagtcaaatgtcataacaatttta 19835252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 34546115 - 34546150
Alignment:
Q  166 aatggaataaagtagtcaaatgtcataacaatttta 201  Q
    |||||||||||||||||||||||||||| |||||||    
T  34546115 aatggaataaagtagtcaaatgtcataataatttta 34546150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 4536700 - 4536658
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||    
T  4536700 aagaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 4536658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 18374362 - 18374415
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaa 164  Q
    |||| ||||||||||||||||||||||| ||||  |||||||| ||| ||||||    
T  18374362 tactccatccattttaaaatgagtatcgatttaatcaattgcaaacaaattaaa 18374415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 17345057 - 17345238
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||||||||||| |||||||||||||||||| ||    |||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17345057 tccattttaaaatgagtgtcgctttagccaattgcacac----taaggaatggaataaagtagtcgaatgtcatagcaattttactaaaataaccttact 17345152  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  17345153 ttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 17345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 34576775 - 34576594
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||||||||| ||| ||| |||||||||||||| | | || ||    || ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  34576775 tccattttaaaataagtgtcgttttagccaattgcacatatatgaa----tgaaataaagtagtcagatgtcataacaattttactaaaataactttact 34576680  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  34576679 ttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaag 34576594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 116 - 303
Target Start/End: Complemental strand, 25932866 - 25932679
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataacctta 215  Q
    ||||| ||||||||| ||| ||| ||||||||||| || || ||||||  |||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  25932866 catccgttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataaagtagttaaatgtcatagcaattttactaaaataacctta 25932767  T
Q  216 ctttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||  |||||||||||||||||||| |||||||| |||||||||||| |||| ||  |||||||||| ||||||||||| ||||    
T  25932766 ctttatagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaagttagaag 25932679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 129 - 303
Target Start/End: Complemental strand, 26189733 - 26189558
Alignment:
Q  129 atgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataag-aac 227  Q
    |||||| ||||||||| |||||||| |||  ||||  |||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||     
T  26189733 atgagtgtcgctttagacaattgcacacatgttaaggaatgaaataaagtagttaaatgtcatagcaattatactaaaataaccttactttataagaaaa 26189634  T
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    || ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||| ||||||||||||    
T  26189633 aaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaag 26189558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 137 - 303
Target Start/End: Complemental strand, 6140815 - 6140649
Alignment:
Q  137 cgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaac 236  Q
    ||||| || |||||||| |||||||||| |||| |||||||||| ||||| | ||| |||||||||||||||||| |||||||||| ||| |||| |       
T  6140815 cgcttcaggcaattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataactttactttatatgaaaaagatatgt 6140716  T
Q  237 ttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| ||||||||||| |||||| |||||||||| || ||||||||||| | | ||||||||||||    
T  6140715 ttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaag 6140649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 6992631 - 6992508
Alignment:
Q  123 tttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttata 222  Q
    ||||||||||||   ||||||| |||||||| |||||||||  |||| |||||| ||||||||  |||||  ||||||||||||||||||||||||||||    
T  6992631 tttaaaatgagtggtgctttagtcaattgcacacagattaagaaatgaaataaaatagtcaaacatcatagtaattttactaaaataaccttactttata 6992532  T
Q  223 agaacaagacaaacttaaagttgc 246  Q
    |||| |||||||||||||||||||    
T  6992531 agaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 12828671 - 12828783
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| |||||||||| |  |||||||||||||||| ||||||| |||||||||||||||||| ||||||  ||||||||| |||||||||||||| |    
T  12828671 cataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgt--gagagaaaagttgaagtatttattga 12828768  T
Q  289 ggataaagttggaag 303  Q
    || ||||||||||||    
T  12828769 gggtaaagttggaag 12828783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 303
Target Start/End: Complemental strand, 6143300 - 6143134
Alignment:
Q  137 cgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaac 236  Q
    ||||| || |||||||| |||||||||| |||| |||||||||| ||||| | ||| |||||||||||||||||| |||||||||| ||| |||| |       
T  6143300 cgcttcaggcaattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataactttactttatatgaaaaagatatgt 6143201  T
Q  237 ttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| ||||||| ||| |||||| ||||| |||| || ||||||||||| | | ||||||||||||    
T  6143200 ttaaaattgcattaaaaattgtgtaagagaaaaaagtttaagtatttattgaaggtaaagttggaag 6143134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 29927370 - 29927258
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||  |   |  ||||||||| ||| |||||||||| |    
T  29927370 cataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaaactacat--gagagaaaagttggagtatttattga 29927273  T
Q  289 ggataaagttggaag 303  Q
    || ||||||||||||    
T  29927272 gggtaaagttggaag 29927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 29915680 - 29915592
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| ||||||||| ||||||||||||| || ||||||||  ||||||| ||| |||||||||| ||| ||||||||||||    
T  29915680 ttactttataagaaaaagacaaacataaagttgcattggaaattgtgtga--gagaaaagttggagtatttattgagggtaaagttggaag 29915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 301
Target Start/End: Original strand, 26669096 - 26669198
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| || |||  ||||||||| ||| ||  |||||| |||||||||    
T  26669096 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagagaaaagttggagattttattgaggataaag 26669193  T
Q  297 ttgga 301  Q
    |||||    
T  26669194 ttgga 26669198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 1135139 - 1135075
Alignment:
Q  138 gctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  1135139 gctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatatcaattttac 1135075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 19675208 - 19675128
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| |||||||| ||||||| | ||| |||||  ||| ||||||||||||||||||||||| |||||||||    
T  19675208 ttttaaaatgagtgtcgctttaaccaattgaacacatattaaggaattgaataaagtagtcaaatgtcatagcaattttac 19675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 23259248 - 23259328
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| |||||| | |||||||||| ||||||| |||||||||  |||| ||||||||||||||||||| ||||||||||||    
T  23259248 ttttgaaatgaatttcgctttagctaattgcacacagattaagaaatgaaataaagtagtcaaatgtcgtaacaattttac 23259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 24555854 - 24555930
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||| | |||||||||||||||||  ||| |||||||||||||||||||| || |||||||||    
T  24555854 aaaatgagtgtcgctttaacaaattgcatacagattaagaaatagaataaagtagtcaaatgtcgtagcaattttac 24555930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 31275659 - 31275743
Alignment:
Q  217 tttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||  |||| |||| ||| |||||||||| ||| ||||||||||||    
T  31275659 tttatatgaaaaagacaaacttaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 31275743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 10520316 - 10520393
Alignment:
Q  125 taaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||| |||||||| ||||||| | ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  10520316 taaaatgagtgtcgctttaaccaattgtacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 10494760 - 10494829
Alignment:
Q  198 tttactaaaataaccttactttataagaacaa-gacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||| || |||||||||||||||| || ||||||||| |||||||||||||| |||| |||||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgagaga 10494829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 4123846 - 4123953
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaa 288  Q
    ||||| ||||||| |||| || ||||| |||||||| | || ||||||||||| ||||||||||| ||||||  || |||||| ||| |||||||||| |    
T  4123846 cataataattttattaaactatccttattttataaggaaaaaacaaacttaaa-ttgcattgaaaattgtgt--gaaagaaaagttggagtatttattga 4123942  T
Q  289 ggataaagttg 299  Q
    || ||||||||    
T  4123943 gggtaaagttg 4123953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 24163625 - 24163716
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacaga-ttaaataatggaataaagtagtcaaatgtcataacaatttta 201  Q
    |||| ||||| ||||||| ||||| ||| |||||||||||||| ||| | ||||  |||| |||||| ||||||||||||||| ||||||||    
T  24163625 tactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataaaatagtcaaatgtcatagcaatttta 24163716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 1924687 - 1924741
Alignment:
Q  212 cttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||    
T  1924687 cttactttataaggaaaatacaaaattaaagttgcattgaaaattgtgtgagaga 1924741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 29713329 - 29713395
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgt 188  Q
    ||||||||||||| ||||||||| |||||||| ||  |||||  |||||||| ||||||||||||||    
T  29713329 ttttaaaatgagtgtcgctttagtcaattgcacacgtattaaggaatggaatcaagtagtcaaatgt 29713395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 23936598 - 23936684
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| || ||||| ||||||||||||||||| ||||    ||||||||  ||| ||||| |||| ||| ||||||||||||    
T  23936598 ttactttataagaaaaaaacaaatttaaagttgcattgaaaattgt----gagagaaaggttggagtatatattgagggtaaagttggaag 23936684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 34513570 - 34513651
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcata 192  Q
    |||| ||||| ||||||||| ||| ||| |||||| ||||||| ||| |||||  |||||||||||||||  ||||||||||    
T  34513570 tactacatccgttttaaaataagtgtcgttttagctaattgcacacatattaagaaatggaataaagtagctaaatgtcata 34513651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 10540443 - 10540483
Alignment:
Q  166 aatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  10540443 aatggaataaagtagtcaaatatcataacaattttattaaa 10540483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 234251 - 234196
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagt 181  Q
    ||||||||| ||| |||| ||||||||| || ||||||| ||||||||||||||||    
T  234251 aaaatgagtgtcgttttaaccaattgcacacggattaaagaatggaataaagtagt 234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 34439427 - 34439516
Alignment:
Q  217 tttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagag---agaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||| ||||||||| ||||||||||||| || |||||| ||||   |||||| ||| ||||| |||| | | ||||||||||||    
T  34439427 tttataagaaaaagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaag 34439516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 9940881 - 9940836
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaa 163  Q
    ||||||| ||||||||||| | |||||||||||||| |||||||||    
T  9940881 tccatttcaaaatgagtattgttttagccaattgcacacagattaa 9940836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 28200145 - 28200326
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||||||||||| |||||||||  ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28200145 ttttaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagttgtcaaatgtcatagcaattttactaaaataaccttactttat 28200244  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| || ||||||||||||||| ||||||| ||||| ||||||||||| ||| |||||||||| ||| ||||||||||||    
T  28200245 aagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttggaag 28200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 122 - 303
Target Start/End: Original strand, 44582701 - 44582882
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||  ||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44582701 ttttaaaatgagtgtcgctttagtgaattgcacacagattaatgaatgaaataaagtagtcaaatgtcataacaattttactaaaataatcttactttat 44582800  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||||||||||||||||||| || ||||||| |||||| ||| |||||||||| ||| ||||||||||||    
T  44582801 aagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaag 44582882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 111 - 266
Target Start/End: Complemental strand, 49895022 - 49894867
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||||||||||||||||| ||| ||| |||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  49895022 tactccatccattttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttactaaaataa 49894923  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  49894922 ccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagaga 49894867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 254838 - 255015
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||| ||||| || |||||||||  |||| | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  254838 aaaatgagtgtcgctttagtcaattacacacagattaagaaatgaactaaagtagtcaaatgtcatagcaattttactaaaataaccctactttataaga 254937  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | |||||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||| ||| ||||||||||||    
T  254938 aaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaag 255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 126 - 303
Target Start/End: Complemental strand, 26252345 - 26252168
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| | |||||| ||||||||| |||||||||  ||||| || |||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  26252345 aaaatgagtgttgctttaaccaattgcacacagattaaggaatgggattaagtagtcaaatgtcattgcaattttactaaaataaccttattttataaga 26252246  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||  |||||||||||||| ||||||||||||    
T  26252245 acaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaag 26252168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 126 - 302
Target Start/End: Original strand, 5854151 - 5854327
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| || ||||||||||||||| |||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5854151 aaaatgagtgtcactttagccaattgcacacagattaaggaatagaataaagtagttaaatgtcataacaattttactaaaataactttactttataaga 5854250  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaa 302  Q
    | ||||||| ||||| |||||||||||| ||||||||||  ||||| ||| |||||||||| |||||||||||||||    
T  5854251 aaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaa 5854327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 50591241 - 50591390
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||||||||| | |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  50591241 ttttaaaatgagtgtcgctttagccaattgtacacagattaaggaatggaataaagtagtaaaatgtcataacaattttactaaaataaccttattttat 50591340  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    | |||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  50591341 aggaacaagacaaacttaaaattgcattgaaaattgtgtgatagagaaaa 50591390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 22665166 - 22664989
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||||||||| |||||||| |||||||||  ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  22665166 ttttaaaatgagtgtcgctttagtcaattgcacacagattaacgaatggaataaagtagtcaaatatcatagcaattttactaaactaaccttactttat 22665067  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||||||||||||| ||| ||| ||||    |||||| || ||| |||||||||| ||| ||||||||||||    
T  22665066 aagaacaagacaaacttaaagttgaattaaaaattgt----gagagagaagttggagtatttattgagggtaaagttggaag 22664989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 42650176 - 42650332
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||| | |||||||||||||||||| |||||||||| | || ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  42650176 aaaatgaatgtcgctttagccaattgcacacagattaaagactgaaataaagtaatcaaatgtcatagcaattttactaaaataaccttagtttataaga 42650275  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtattt 283  Q
    | |||||||||||||| ||||||||||| |||||||||||| |||| |||||||||||    
T  42650276 aaaagacaaacttaaaattgcattgaaaattgtgtgagaga-aaaagttgaagtattt 42650332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 672209 - 672383
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||| |||| ||||||||| |||||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  672209 aaaatgagtgtcgttttaaccaattgcacacagattatagaatggaataaagtagtcaaatatcatatcaattttactaaaataaccttac-ttataaga 672307  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | |||||||||||||| ||||||||||| ||||||  ||||||||| ||  |||||||||| ||| ||||||||||||    
T  672308 aaaagacaaacttaaatttgcattgaaaattgtgt--gagagaaaagttagagtatttattgagggtaaagttggaag 672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 303
Target Start/End: Complemental strand, 2459231 - 2459058
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||| |||||||||  |||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2459231 aaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 2459132  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | || ||||||||||||||| ||||||| ||||    ||||||||| ||  ||||||| || ||| ||||||||||||    
T  2459131 aaaatacaaacttaaagttgtattgaaaattgt----gagagaaaagtttgagtatttgttgagggtaaagttggaag 2459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 118 - 302
Target Start/End: Original strand, 11134379 - 11134563
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 217  Q
    ||||||| ||||||||| ||| |||||||||||||| ||| |||||  |||||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  11134379 tccatttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatgacagttttactaaaatagccttact 11134478  T
Q  218 ttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaa 302  Q
    ||||  ||  |||||||||||| |||||||||| || ||||| ||||||||||| ||| |||||||||| |||  ||||||||||    
T  11134479 ttatttgacaaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaagttggaa 11134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 166 - 303
Target Start/End: Complemental strand, 44024732 - 44024595
Alignment:
Q  166 aatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagag 265  Q
    |||| ||||||||||| |||||| ||| |||||||||||||||||||||| |||||| | |||||||||||||||||||  ||||||| |||||||||||    
T  44024732 aatgtaataaagtagttaaatgttatagcaattttactaaaataaccttattttatagggacaagacaaacttaaagttaaattgaaaattgtgtgagag 44024633  T
Q  266 agaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||| |||||||||||||| ||| ||||||||||||    
T  44024632 agaaaagttgaagtatttattgagggtaaagttggaag 44024595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 271
Target Start/End: Original strand, 9552269 - 9552427
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataa 210  Q
    |||| ||||| ||||||||| ||| |||  |||| |||||| | | |||||||  |||| |||||||||||||||||||||| |||||||||||||||||    
T  9552269 tactccatccgttttaaaataagtgtcg--ttagtcaattgtacatagattaatgaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 9552366  T
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
     ||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||    
T  9552367 acttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaaaa 9552427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 9333305 - 9333193
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||||||| |||| ||||||  |||||||||||  |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  9333305 aaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaaccttactttataaga 9333206  T
Q  226 acaagacaaactt 238  Q
    | |||||||||||    
T  9333205 ataagacaaactt 9333193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 9357078 - 9356966
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||||||| |||| ||||||  |||||||||||  |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  9357078 aaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaaccttactttataaga 9356979  T
Q  226 acaagacaaactt 238  Q
    | |||||||||||    
T  9356978 ataagacaaactt 9356966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 17806348 - 17806478
Alignment:
Q  172 ataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||| |  |||||||||    
T  17806348 ataaagtagttaaatgtcataacaattttactaaaataactttcctttataagaaaaagacaaacttaaaattgcattgaaaattgtat--gagagaaaa 17806445  T
Q  272 attgaagtatttattaaggataaagttggaagt 304  Q
     ||| |||||||||| | | |||| ||||||||    
T  17806446 gttggagtatttattgaaggtaaaattggaagt 17806478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 84445 - 84585
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||| |||||||| |||||||||  ||| |||| || || |||   | ||||||| ||||||||||||  |||||||||||||||    
T  84445 aaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtccttactttataaga 84544  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    | |||||||||||||||||||||||||| ||||| ||||||    
T  84545 aaaagacaaacttaaagttgcattgaaaattgtgcgagaga 84585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 24040947 - 24041091
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| ||||||||||||||| || |  ||||||  |||||||| || || |||   | ||||||| |||||||||| |  |||||||||||    
T  24040947 ttttaaaatgagtgtcgctttagccaatttcacatggattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttat 24041046  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||    
T  24041047 aagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 24041091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 303
Target Start/End: Original strand, 28751335 - 28751510
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||| |||||||||||||| |||||||||  |||| |||||| || |||   | ||||||| |||||||||| |  |||||||||||||||    
T  28751335 aaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgcccttactttataaga 28751434  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    | | ||||||||||||||| |||||||| |  |||| ||||||||| ||  |||||||||| ||| ||||||||||||    
T  28751435 aaaggacaaacttaaagttacattgaaaat--tgtgcgagagaaaagtttgagtatttattgagggtaaagttggaag 28751510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 253
Target Start/End: Original strand, 45749407 - 45749553
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||||||| ||||| ||||||||||||| |||||||| | ||||||| ||| |||| ||||||||||||| || |||   | ||||||| ||||||||||    
T  45749407 atattactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacacttttactaaa 45749506  T
Q  207 ataaccttactttataagaacaagacaaacttaaagttgcattgaaa 253  Q
        |||||||||||||||| |||||||||||||| || ||||||||    
T  45749507 ccgcccttactttataagaaaaagacaaacttaaatttacattgaaa 45749553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 38132189 - 38132262
Alignment:
Q  198 tttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  38132189 tttactaaaataaccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaagaaaa 38132262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 303
Target Start/End: Complemental strand, 11650212 - 11650108
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||| ||||| ||||||||||||||||||||||| || ||||||||  ||||||||||| |||||||||| ||| |||||    
T  11650212 ttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaattgtgtga--gagaaaaattggagtatttattgagggtaaag 11650115  T
Q  297 ttggaag 303  Q
    |||||||    
T  11650114 ttggaag 11650108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 37437331 - 37437476
Alignment:
Q  127 aaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatttt-actaaaataaccttactttataaga 225  Q
    |||||||| ||||||||||| |||||| ||| |||||  |||| ||| || || |||   | ||||||| |||| |||||| |  |||||||||||||||    
T  37437331 aaatgagtgtcgctttagcccattgcacacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgcccttactttataaga 37437430  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaa 271  Q
    | |||||||||||||||||||||||||| |||||||||||| ||||    
T  37437431 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaa 37437476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 38530756 - 38530844
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||  |||| |||||||||||||||||||  | |||||||||||||    
T  38530756 tccattttaaaatgagtgtcgctttagccaattatatacagattaagaaatgaaataaagtagtcaaatgtcgcagcaattttactaaa 38530844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 49468628 - 49468712
Alignment:
Q  118 tccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||  |||| |||||| ||||||||||||||| |||||||||    
T  49468628 tccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 49468712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 5317590 - 5317679
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||   ||||||||| ||| |||||||||| ||| ||||||||||||    
T  5317590 ccttattttataagaaaaagacaaacttaaagttgcattgaaaattgtg---gagagaaaagttgtagtatttattgagggtaaagttggaag 5317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 15823264 - 15823184
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||||||| |||||||||||||| ||| |||||  ||||||||||| |||| |||||||||| |||||||||    
T  15823264 ttttaaaatgagtatcgttttagccaattgcacacatattaagaaatggaataaaatagttaaatgtcatagcaattttac 15823184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 43755256 - 43755113
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 221  Q
    ||||||||||||| |||||||||||||||||| |||||||| | |||||||| || || | || |   | |||| ||||||||||    |||||||| ||    
T  43755256 ttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataat-aattaaaaaaacacttttactaaatcgcccttacttaat 43755158  T
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||| ||||||||||||||||||  |||||| ||||||||||||    
T  43755157 aagaaaaagacaaacttaaagttgttttgaaaattgtgtgagaga 43755113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 5463816 - 5463725
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| ||||||||| |||||||||||||||||| | | |||||  |||| |||||||||||||| |||||||||||||||||    
T  5463816 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgcaataaagtagtcaattgtcataacaattttac 5463725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 35847846 - 35847937
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| |||| |||||||| ||||||||  |||||||| ||| |||||  ||| |||||||||||||||||||||||||||||||||    
T  35847846 tactccatccgttttgaaatgagtgtcgctttactcaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 35847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 264
Target Start/End: Original strand, 17919748 - 17919885
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||| ||| || || |||  |  ||||||| |||||||||| |  ||||  ||||||  |    
T  17919748 aaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcat-taacataacacttttactaaactgcccttgttttatatta 17919846  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    | |||||||||||||||||||||||||| ||||||||||    
T  17919847 aaaagacaaacttaaagttgcattgaaaattgtgtgaga 17919885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 40717272 - 40717370
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    |||||||||||||||||||| ||| ||| ||||  |||||||| ||| ||||   ||||||||||||||||||||| ||||| ||||||||| ||||||    
T  40717272 tacttcatccattttaaaataagtgtcgttttaatcaattgcacacatattacggaatggaataaagtagtcaaatatcatagcaattttaccaaaata 40717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 48259772 - 48259926
Alignment:
Q  108 tattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaa 207  Q
    ||||||| | ||| ||| ||||||||| ||| |||||||||||||| |||||||||  ||| |||| || || ||    | ||||||| ||||| ||||     
T  48259772 tattactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatagaatgaaataatcgttagacataacacttttattaaac 48259871  T
Q  208 taaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtga 262  Q
    |  |||| ||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  48259872 tgcccttgctttataagaaaaagataaacttaaagttgcattgaaaattgtgtga 48259926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 52125039 - 52125137
Alignment:
Q  104 tatatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| ||||| ||||| ||||||||||||| ||| |||||||||||| ||||| | |||  |||| ||||||||||||||||||| || |||||||||    
T  52125039 tatattttactccatccgttttaaaatgagtgtcgttttagccaattgtatacataataagaaatgtaataaagtagtcaaatgtcgtagcaattttac 52125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 15573856 - 15573763
Alignment:
Q  109 attacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||| | | ||| ||||||| | ||| |||||||||||||| ||| |||||| ||||||||||||||||||||||| ||| |||||||||    
T  15573856 attacttccttcgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaagaatggaataaagtagtcaaatgttatagcaattttac 15573763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 31491691 - 31491771
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||||| ||| |||||| ||||||| ||| ||| |  ||||||||||||||||||||||||||| |||||||||    
T  31491691 ttttaaaatgagtgtcgttttagcaaattgcaaacatattcaggaatggaataaagtagtcaaatgtcatagcaattttac 31491771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 32806863 - 32806939
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| | |||||||||||| ||||| ||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  32806863 aaaatgattgtcgctttagccagttgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 32806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 2245923 - 2245840
Alignment:
Q  216 ctttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||  |||||||||| ||  |||||||||| ||| ||||||||    
T  2245923 ctttataagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttg 2245840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 25152051 - 25151960
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||| | ||| ||||| ||| || ||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||  ||||||||    
T  25152051 tacttcattcgtttcaaaataagtgtcactttaaccaattgcacacagattaaagaatagaataaagtagtcaaatgtcatagtaattttac 25151960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 49426329 - 49426420
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| ||||||||| ||||||||| |||||||| ||| |||||  |||||||| |||||||||||||| ||| |||||||||    
T  49426329 tactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaatggaatgaagtagtcaaatgtgatatcaattttac 49426420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 50349784 - 50349930
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataa-- 223  Q
    ||||||||| | |||||||||||||| | ||| |||||  |||||||| || || |||   | ||||||| |||||||||| |  |||||||||||||      
T  50349784 aaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataatt 50349883  T
Q  224 ----gaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
        ||| |||||||||||||||||||||||||| ||||||||||||    
T  50349884 ataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 50349930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 10843027 - 10842930
Alignment:
Q  105 atatattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||| |||| ||||| ||| ||||||||| ||| ||||| |||||||| | | |||||  |||| |||||||||||||||||||||| |||||||||    
T  10843027 atataatactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10842930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 43105592 - 43105669
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||| |||||||||| || | ||| |||||||||| |||||||||||||| ||||||||||| ||| ||||||||    
T  43105592 cataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaattgcgtgagaga 43105669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 266
Target Start/End: Complemental strand, 30006355 - 30006215
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||| | ||||||||| |||||||| |||||||||  ||| |||| || || |||   | ||||||| | |||||||| |   ||||||||||||||    
T  30006355 aaaatgaatgtcgctttagtcaattgcacacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttactttataaga 30006256  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    | |||| ||| ||||||||||||||||| |||| |||||||    
T  30006255 aaaagataaatttaaagttgcattgaaaattgtttgagaga 30006215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 44108842 - 44108751
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||| |||||||||  | ||||||||||||||| ||| |||||  |||| || |||||||| ||||||||||||||||||||    
T  44108842 tactccatccgtttcaaaatgagtgacactttagccaattgcacacatattaaggaatgaaacaaagtagttaaatgtcataacaattttac 44108751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 48319932 - 48320067
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||||||||||||| ||| |||||  |||||||| ||    |||   | ||||| | |||||||||| |  ||||||||||||| |    
T  48319932 aaaatgagtgtcgctttagccaattgcacacatattaagaaatggaatgaa----tcattagacataagacttttactaaattgcccttactttataaaa 48320027  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
      ||||||||||||||||||||| |||| ||||||||||||    
T  48320028 gaaagacaaacttaaagttgcatcgaaa-ttgtgtgagaga 48320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 299
Target Start/End: Complemental strand, 6332392 - 6332221
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| |||||||| ||||||||| ||| |||||  ||| |||| || || |||   | ||||||| |||||||||| |  | ||  |||||| ||    
T  6332392 aaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatga 6332293  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    | ||||||||| ||||||| |||||||| |||||||||| |  ||| ||| |||||||||||||  ||||||||    
T  6332292 aaaagacaaacataaagttacattgaaaattgtgtgagaaa--aaagttggagtatttattaagagtaaagttg 6332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 10690946 - 10691020
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    |||||| |||||||||| |   |||||||  |||||| |||||||||||||||||||||||||| ||||||||||    
T  10690946 ataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 10691020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 264
Target Start/End: Complemental strand, 12002471 - 12002333
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataaga 225  Q
    ||||||||| ||| ||||| |||||||| ||| |||||  |||| ||| || || |||   | ||||| | |||||||||| |  ||||  |||||| ||    
T  12002471 aaaatgagtgtcgttttagacaattgcacacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgcccttgttttatatga 12002372  T
Q  226 acaagacaaacttaaagttgcattgaaagttgtgtgaga 264  Q
    | |||||||||||||||||||||||||| ||||||||||    
T  12002371 aaaagacaaacttaaagttgcattgaaaattgtgtgaga 12002333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 1430551 - 1430604
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||| ||||    
T  1430551 ttactttataagaaaaagacaaacttaaagttgcattggaaattgtgtgtgaga 1430604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 1740565 - 1740641
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||| | ||| ||||||||||| ||  || |||||| |||||||||||||| |||||||| |||||||||||||    
T  1740565 aaaatgaatgtcgttttagccaattacacgcatattaaagaatggaataaagtactcaaatgtaataacaattttac 1740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 24611484 - 24611524
Alignment:
Q  166 aatggaataaagtagtcaaatgtcataacaattttactaaa 206  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24611484 aatgaaataaagtagtcaaatgtcataacaattttactaaa 24611524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 43929822 - 43929735
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    |||||||||||||| ||||| |||||||||||| || |||| || ||||||||   |||| || |||||||||| ||| ||||||||||||    
T  43929822 ttactttataagaaaaagactaacttaaagttgtatcgaaaattatgtgagag---aaaagtggagtatttattgagggtaaagttggaag 43929735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 52403616 - 52403527
Alignment:
Q  211 ccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaa 302  Q
    |||||||||||||| | |||||||| ||||||||||| ||||| || ||||||||||||   ||  |||||||||| ||| |||||||||||    
T  52403616 ccttactttataaggaaaagacaaaattaaagttgcactgaaaattatgtgagagagaag--tttgagtatttattgagggtaaagttggaa 52403527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 1429004 - 1428920
Alignment:
Q  213 ttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    |||||||||||||| | |||||||||||||||| |||| || ||||||||  ||||||| ||  |||||||||| ||| ||||||||    
T  1429004 ttactttataagaaaaggacaaacttaaagttgaattggaaattgtgtga--gagaaaagtttgagtatttattgagggtaaagttg 1428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 4471319 - 4471371
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaa 163  Q
    |||||| ||| ||| ||||||||| ||||||||| ||||||||||||||||||    
T  4471319 tacttcctccgtttcaaaatgagtgtcgctttagtcaattgcatacagattaa 4471371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 9915670 - 9915594
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||||| |||  || ||| |||||  |||| |||||||||||||||||||||| |||||||||    
T  9915670 aaaatgagtgtcgttttagctaataacacacatattaaggaatgtaataaagtagtcaaatgtcatagcaattttac 9915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 44583933 - 44583870
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaa 253  Q
    |||||||||||| ||||| |  ||||| |||||||||| ||||||||||||| ||||||||||||    
T  44583933 cataacaattttcctaaactg-ccttattttataagaaaaagacaaacttaatgttgcattgaaa 44583870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 34110763 - 34110692
Alignment:
Q  116 catccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatg 187  Q
    ||||| ||| |||||||| | || ||||||||||| |||||| |||||  |||| |||||||||||||||||    
T  34110763 catccgtttcaaaatgagaaacgttttagccaattacatacaaattaatgaatgaaataaagtagtcaaatg 34110692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 43738252 - 43738352
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| || | |||||||||||||| |||| |||  ||||||| | |||||| ||| ||  || ||||||||||||||||||||| ||  |||||    
T  43738252 ttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaattgcgt--gaaagaaaaattgaagtatttattgagagtaaag 43738349  T
Q  297 ttg 299  Q
    |||    
T  43738350 ttg 43738352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 50094459 - 50094380
Alignment:
Q  123 tttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||||||||||| |||||||| |||||||||  || |||||  ||| |||||||||||| |||||| |||  ||||||||    
T  50094459 tttaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaagtagttaaatgtaatagtaattttac 50094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 15698766 - 15698853
Alignment:
Q  214 tactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||| |||| ||||||||||||  ||||||| || |||  ||||||||| ||  |||||||||| ||  ||||||||||||    
T  15698766 tactttataagaaaaagataaacttaaagttctattgaaaattatgt--gagagaaaagtttgagtatttattgagagtaaagttggaag 15698853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 30686864 - 30686811
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataa 175  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||  ||||||||||    
T  30686864 ttttaaaatgagtgtcgttttagctaattgcacacagattaagaaatggaataa 30686811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 40060896 - 40060973
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    ||||||| |||||||||| |  |||||||||||||||| |||| ||  ||| ||||||||||||| || ||| |||||    
T  40060896 cataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaaattttgtaagaga 40060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 45377179 - 45377249
Alignment:
Q  228 aagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttgg 300  Q
    ||||||||||||||||| |||||||| |  |||| ||||||||| ||| ||||| |||| ||| |||||||||    
T  45377179 aagacaaacttaaagtttcattgaaaat--tgtgcgagagaaaagttggagtatctattgagggtaaagttgg 45377249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 43358135 - 43358215
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||||| | ||| ||||| |||||| | | | |||||  |||| |||||| ||||||||||||||| |||||||||    
T  43358135 ttttaaaatgaatgtcgttttagtcaattgtacatatattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 43358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 46286743 - 46286819
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| ||||  |||||||| ||| |||||  ||| ||||||||||| ||||||||||| || ||||||    
T  46286743 aaaatgagtgtcgttttaatcaattgcacacatattaagaaatagaataaagtagacaaatgtcatagcacttttac 46286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 48025175 - 48025239
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaat 186  Q
    |||||||||  || |||||||| ||||||||| ||| ||||   |||||||||||||||||||||    
T  48025175 ttttaaaataggtgtcgctttaaccaattgcacacacattatggaatggaataaagtagtcaaat 48025239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 110 - 303
Target Start/End: Complemental strand, 321969 - 321776
Alignment:
Q  110 ttacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaata 209  Q
    ||||| |||| |||| ||||||||| |||||||||| ||||||| || | ||||  ||||||||||||||||||||| |||||  |||||||||||||||    
T  321969 ttactccatcaatttcaaaatgagtgtcgctttagctaattgcacacgggttaaggaatggaataaagtagtcaaatatcatagtaattttactaaaata 321870  T
Q  210 accttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||| ||  |||| ||||| ||| ||||||||||||    
T  321869 accttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaagttggaag 321776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 266
Target Start/End: Original strand, 11991 - 12148
Alignment:
Q  108 tattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaa 207  Q
    ||||||| | ||| ||| ||||||||| |||||||||| ||||||| | |||||||  |||||||| || || |||   | ||||||| ||||||||||     
T  11991 tattactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaaac 12090  T
Q  208 taaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  12091 tg-ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 12148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 62859 - 62783
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| |||||||||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  62859 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcataacaattttac 62783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 24652 - 24743
Alignment:
Q  111 tacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    |||| ||||| ||||||||||||| |||||||||||| ||| | ||| |||||  ||||||||||| ||||||||||||||| |||||||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagccatttgtacacatattaaggaatggaataaaatagtcaaatgtcatagcaattttac 24743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 1697 - 1595
Alignment:
Q  197 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaag 296  Q
    |||||||||| |  |||||||||||||||| |||||||| ||||||||||||||||| || |||  ||||||||| ||| ||  |||||| |||||||||    
T  1697 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagagaaaagttggagattttattgaggataaag 1600  T
Q  297 ttgga 301  Q
    |||||    
T  1599 ttgga 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 1371 - 1448
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattt 199  Q
    ||||||||||||| || |||||| |||||||| |||||||||  |||| |||||||||||||||||||||| ||||||    
T  1371 ttttaaaatgagtgtcactttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 1448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 7732 - 7802
Alignment:
Q  231 acaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttggaag 303  Q
    ||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||| ||  ||||||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgt--gagagaaaagttgaagtatttattgagattaaagttggaag 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 4098 - 4211
Alignment:
Q  189 cataacaattttactaaaataaccttactttataagaacaa-gacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttatta 287  Q
    ||||||| |||||| ||| |  ||||||||||||| || || |||||||||||||||  ||||||| || |||||||||  ||| ||| ||||||||||     
T  4098 cataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaaaattatgtgagaga--aaagttggagtatttattg 4195  T
Q  288 aggataaagttggaag 303  Q
    ||||||||||||||||    
T  4196 aggataaagttggaag 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 6254 - 6326
Alignment:
Q  126 aaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaatt 198  Q
    ||||||||| || ||||||| ||||||| || ||||||  |||| ||||||||||||||||||||||||||||    
T  6254 aaaatgagtgtcactttagctaattgcacacggattaaggaatgaaataaagtagtcaaatgtcataacaatt 6326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 16031 - 16106
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaagttgtgtgagaga 266  Q
    |||||| |||||||||| || | ||||||||||| || | |||||||||||||||||||||||| ||||||||||||    
T  16031 ataacatttttactaaactacctttactttataaaaa-atgacaaacttaaagttgcattgaaaattgtgtgagaga 16106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 21004 - 21084
Alignment:
Q  122 ttttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttac 202  Q
    ||||||||| ||| |||||||||||||||||| | |||||||  |||  |||||| |||||||| |||||| |||||||||    
T  21004 ttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaatagtcaaacgtcatagcaattttac 21084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 158229 - 158154
Alignment:
Q  222 aagaacaagacaaacttaaagttgcattgaaagttgtgtgagagagaaaaattgaagtatttattaaggataaagttg 299  Q
    ||||| |||||||||||||||||||||||||| |  | || ||||||||| ||| |||||||||| ||| ||||||||    
T  158229 aagaaaaagacaaacttaaagttgcattgaaaat--tatgcgagagaaaagttgtagtatttattgagggtaaagttg 158154  T

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Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 158333 - 158265
Alignment:
Q  107 atattacttcatccattttaaaatgagtatcgctttagccaattgcatacagattaaataatggaataaa 176  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||| | ||| |||||| |||| ||||||    
T  158333 atattacttcatccgttttaaaatgagtgtcgttttagccaattg-acacaaattaaagaatgaaataaa 158265  T

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Target: scaffold0580 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1735 - 1690
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaa 235  Q
    |||||| |||||||||| | ||||||||||||||||| ||||||||    
T  1735 ataacatttttactaaactgaccttactttataagaaaaagacaaa 1690  T

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Target: scaffold0580; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 9474 - 9429
Alignment:
Q  190 ataacaattttactaaaataaccttactttataagaacaagacaaa 235  Q
    |||||| |||||||||| | ||||||||||||||||| ||||||||    
T  9474 ataacatttttactaaactgaccttactttataagaaaaagacaaa 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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