View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4418_high_10 (Length: 566)
Name: NF4418_high_10
Description: NF4418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4418_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 473; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 8 - 549
Target Start/End: Original strand, 8621968 - 8622506
Alignment:
| Q |
8 |
taatattcttctt-taaatatgatggagagtgtcctaattaaaagttgaaagggatgtcatagtgcaaatcatccaccataacattagatgagtaaagta |
106 |
Q |
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| T |
8621968 |
taatattcttcttataaatatgatgcagagtgtcctaattaaaagttgaaagggatgtcatagtgcaaatcatccaccataacattagatgagtaaagta |
8622067 |
T |
|
| Q |
107 |
caatagacctttgttttttaagttatctcgttctagattaaaatttgattgcgtgcatagaaatgtcaaagtaataccataaaaagaaatcgaacaaaat |
206 |
Q |
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| T |
8622068 |
caatagacctttgttttttaagttatctcgttctagattaaaatttgattgcgtgcatagaaatgtcaaagtaataccataaaaagaaatcgaacaaaat |
8622167 |
T |
|
| Q |
207 |
aatgcatttgatatagatttggtctctaacctttagttagttctaaaatatactatactatatttttatgcaccgtttagaaaaacttgttgagtcattt |
306 |
Q |
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| T |
8622168 |
aatgcatttgatatagatttggtctctaacct----ttaggtctaaaatatactatactatatttttatgcaccgtttagaaaaacttgttgagtcattt |
8622263 |
T |
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| Q |
307 |
tccaatacataaaacaattttggattgnnnnnnncaatgtcgaggacgaacacaaacctctcgctgacattctttttatttcatttcttaacaaaacaat |
406 |
Q |
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| T |
8622264 |
tccaatacataaaacaattttggattgtttttttcaatgttgaggacgaacacaaaactctcgctgacattctttttatttcatttcttaacaaaacaat |
8622363 |
T |
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| Q |
407 |
tacgacttttaaataaaagtatgcatgaagcactggaatatccaacgcatattatgcaaattgtcaaattatttatttgtattgataaaatgtataaggt |
506 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8622364 |
tacgacttttaaataaaagtatgcatgaagcactggaatatccaacgcatattacgcaaattgtcaaattatttatttgtattgataaaatgtataaggt |
8622463 |
T |
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| Q |
507 |
ttgaaacgaattttaatatacataacaatacagctgttgactt |
549 |
Q |
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| T |
8622464 |
ttgaaacgaattttaatatacttaacaatacagctgttgactt |
8622506 |
T |
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