View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4418_high_8 (Length: 571)
Name: NF4418_high_8
Description: NF4418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF4418_high_8 |
| |
|
[»] scaffold0257 (3 HSPs) |
| | |
|
[»] scaffold1142 (2 HSPs) |
| | |
|
[»] scaffold0043 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 496; Significance: 0; HSPs: 79)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 7 - 557
Target Start/End: Original strand, 28150871 - 28151415
Alignment:
Q |
7 |
aagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaaagt |
106 |
Q |
|
|
|||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28150871 |
aagaaatggaacaaacactagagacaaagcatgaatttgttgaaaatgttcctcaacaagagatgccatcagtagcaataataccaacaaattcaaaagt |
28150970 |
T |
|
Q |
107 |
aatttgaaggccatgtgaaaatcacttggataaccctctccaaatatatacgtatacatattcaatattagtctagtaatgaaataattcatatgttctt |
206 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28150971 |
aatttgaaggccatgtgaaaatcacttggatattcctctccaaatatata------catattcaatattagtctagtaatgaaataattcatatgttctt |
28151064 |
T |
|
Q |
207 |
actacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatag |
306 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28151065 |
actacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatag |
28151164 |
T |
|
Q |
307 |
taccacctcatcgtgcatataaatctaaaaaagaaacgttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttggaagcatcaact |
406 |
Q |
|
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28151165 |
taccacctcattgtgcatataaatctaaaaaagaaacgttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttggaagcatcaact |
28151264 |
T |
|
Q |
407 |
ttgtcgaccattttcttgtattctttttcacactttgtcattacagaaattgaattatactacaatattgacaggttagcgaaataagtgttgaagaagg |
506 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28151265 |
ttgtcgaccattttcttgtattctttttcacactttgtcagtacagaaattgaattatactacaatattgacaggttagcgaaataagtgttgaagaagg |
28151364 |
T |
|
Q |
507 |
aactacatcagctaatgccaagacaaaaacatcttcacaggtcttcttctt |
557 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28151365 |
aactacatcagctaatgccaagacaaaaacatcttcacaggtcttcttctt |
28151415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 396
Target Start/End: Original strand, 28003114 - 28003512
Alignment:
Q |
1 |
tgtagaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattc |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
28003114 |
tgtagaaagaaatggaacaaacactagagacagagcatgaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataaaaccaacaaattc |
28003213 |
T |
|
Q |
101 |
aaaagtaatttgaaggccatgtgaaaatcacttggataaccctctccaaatatatacgtatacatattcaatattagtctagtaatgaaataattcatat |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |
|
|
T |
28003214 |
aaaagtaatttgaaggccatgtgaaaatcacttggataatcctctcccaatatatacgtatacatattcaatattagtctagtaacgaactaattaatat |
28003313 |
T |
|
Q |
201 |
gttcttactac---aggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataat |
297 |
Q |
|
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
28003314 |
gttcttactacaggaggagttgatgaatgaacaagaaatggagcaaaaacgtctacttggagaaactgatgctaccgtcaaaccttctcaagaaaataat |
28003413 |
T |
|
Q |
298 |
gtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaacgttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
28003414 |
gtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaacgttaaaaatatgttgcaagtaatttacattttcatgttatgcaatcagttgga |
28003512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 159 - 396
Target Start/End: Original strand, 27979557 - 27979794
Alignment:
Q |
159 |
tatacatattcaatattagtctagtaatgaaataattcatatgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtgga |
258 |
Q |
|
|
||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||| || |||| |
|
|
T |
27979557 |
tatacatattcgttattagtctagtaaaagactaattcatatgttcttattacaggagttgatggatgaacaacaaatggagcaacaacgtccacttgga |
27979656 |
T |
|
Q |
259 |
gaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaacgttaaaaatatgttg |
358 |
Q |
|
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||| |
|
|
T |
27979657 |
gaaactgatgctaccgtcaaaccttctccagaaaataatgtaatatagtaccacctcattgtgaatataaagctaaaaaagaaacattaaaaatatgttg |
27979756 |
T |
|
Q |
359 |
caactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
T |
27979757 |
caactaatttacattttcttgttatgcaatcagttgga |
27979794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 245 - 396
Target Start/End: Original strand, 27919515 - 27919666
Alignment:
Q |
245 |
aacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaacg |
344 |
Q |
|
|
|||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |
|
|
T |
27919515 |
aacgtccacttggagaaattgatactaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcattgtgaatataaagctaaaaaagaaaca |
27919614 |
T |
|
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
27919615 |
ttaaaaatatgttgcaactaatttacattttcttgttatgcaatcagttgga |
27919666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 255 - 396
Target Start/End: Original strand, 28036614 - 28036755
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaacgttaaaaatat |
354 |
Q |
|
|
|||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| |
|
|
T |
28036614 |
tggagaaactgatgctaccgtcaaagcttctccagaaaataacgtaatatagtaccacctcattgtgcatataaagctaaaaatgaaacattaaaaatat |
28036713 |
T |
|
Q |
355 |
gttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28036714 |
gatgcaactaatttacattttcatgttatgcaatcagttgga |
28036755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 27919307 - 27919414
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaa |
103 |
Q |
|
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| | |
|
|
T |
27919307 |
agaaagaaatagaacaaacactagagacagagcatgaatttgttgaaaatgttcctcaacaaaagatgccatcagtagcaataataccaacaaattcaga |
27919406 |
T |
|
Q |
104 |
agtaattt |
111 |
Q |
|
|
|||||||| |
|
|
T |
27919407 |
agtaattt |
27919414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 191 - 340
Target Start/End: Original strand, 11420146 - 11420295
Alignment:
Q |
191 |
taattcatatgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaaga |
290 |
Q |
|
|
|||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||| || ||| |||| |||||||||||||||||||| || || |
|
|
T |
11420146 |
taattcatatgttcatattacaggagttgatgaatgaacaaccaatggagcaacaacgtccacttggtgaaactgatgctaccgtcaaacctttgcagga |
11420245 |
T |
|
Q |
291 |
aaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaaga |
340 |
Q |
|
|
||||| |||||||||||||| ||||| ||||||||||| |||||||||| |
|
|
T |
11420246 |
aaatacagtaatatagtaccatctcattgtgcatataaaactaaaaaaga |
11420295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 27979427 - 27979538
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtag---caataataccaacaaattc |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||| |
|
|
T |
27979427 |
agaaagaaatggaacaaacactagagacagagcatgaatttgttgaaaatgttcctcaacaagacatgccatcagtagcaacaatattaccaacaaattc |
27979526 |
T |
|
Q |
101 |
aaaagtaatttg |
112 |
Q |
|
|
||||||||||| |
|
|
T |
27979527 |
gaaagtaatttg |
27979538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 11419936 - 11420043
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaa |
103 |
Q |
|
|
|||||||||| | ||||||||||| ||||||||| | ||||||||||||||| |||| ||| ||||| |||||| ||||||||||||||||||||||| | |
|
|
T |
11419936 |
agaaagaaattggacaaacactagtgacagagcatggatttgttgaaaatgttcctcgtcatgagattccatcaatagcaataataccaacaaattcaga |
11420035 |
T |
|
Q |
104 |
agtaattt |
111 |
Q |
|
|
|||||||| |
|
|
T |
11420036 |
agtaattt |
11420043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 28036380 - 28036490
Alignment:
Q |
12 |
atggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaaagtaattt |
111 |
Q |
|
|
|||||| ||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||||||| || |||||||| |||| |||||| || |
|
|
T |
28036380 |
atggaagaaacactagagacagagcatgaatttgttgaaaatttccctcgtgaagagatgccatcagtagcaaaaaaaccaacaagttcagaagtaagtt |
28036479 |
T |
|
Q |
112 |
gaaggccatgt |
122 |
Q |
|
|
||||||||| |
|
|
T |
28036480 |
acaggccatgt |
28036490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 200 - 342
Target Start/End: Original strand, 28184908 - 28185050
Alignment:
Q |
200 |
tgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgt |
299 |
Q |
|
|
||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| | |||| |||| |
|
|
T |
28184908 |
tgttcttgttacaggagttgatgaatgaacaatcaatggagcagcaacgtctacttggagaacctgatactaccgtcaaaccttctcaggtaaatcatgt |
28185007 |
T |
|
Q |
300 |
aatatagtaccacctcatcgtgcatataaatctaaaaaagaaa |
342 |
Q |
|
|
||| | |||||||| | | ||||||||||| ||||||| |||| |
|
|
T |
28185008 |
aatgtcgtaccaccgcgttgtgcatataaagctaaaaatgaaa |
28185050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 27460056 - 27459938
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaa |
103 |
Q |
|
|
||||||||||||||||| |||| ||||||| ||| ||||||| ||||||||| ||||| | ||||||||||||||||||| |||||||||| | ||| | |
|
|
T |
27460056 |
agaaagaaatggaacaaccacttgagacagggcatgaatttgatgaaaatgttcctcaaaaggagatgccatcagtagcaacaataccaacagactcaga |
27459957 |
T |
|
Q |
104 |
agtaatttgaaggccatgt |
122 |
Q |
|
|
|||||| || ||||||||| |
|
|
T |
27459956 |
agtaatgtgcaggccatgt |
27459938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 198 - 335
Target Start/End: Original strand, 28149039 - 28149176
Alignment:
Q |
198 |
tatgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataat |
297 |
Q |
|
|
||||||||| ||||||||||||||||||||| | |||||| ||| ||||| || |||||||| |||| || |||||||||||||||| | |||| || |
|
|
T |
28149039 |
tatgttcttgttacaggagttgatgaatgaacgatcaatggaccaacaacgttcacttggagaaactgatactgccgtcaaaccttctcaggtaaatcat |
28149138 |
T |
|
Q |
298 |
gtaatatagtaccacctcatcgtgcatataaatctaaa |
335 |
Q |
|
|
||||||| |||||||| ||| ||||||||||| ||||| |
|
|
T |
28149139 |
gtaatatcgtaccaccgcattgtgcatataaagctaaa |
28149176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 17745394 - 17745306
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaac |
343 |
Q |
|
|
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||||| ||||| |
|
|
T |
17745394 |
tggagaaactgatgctaccgtcaaaccttctcaggaaaataatgtaatatagtaccacctcattgtttatataagactaaaaatgaaac |
17745306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 19046714 - 19046626
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaac |
343 |
Q |
|
|
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||||| ||||| |
|
|
T |
19046714 |
tggagaaactgatgctaccgtcaaaccttctcaggaaaataatgtaatatagtaccacctcattgtttatataagactaaaaatgaaac |
19046626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 17745638 - 17745552
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataatac |
90 |
Q |
|
|
|||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| | ||| ||||||||||||||| |||||| |
|
|
T |
17745638 |
agaaagaaatggaacaaacaatagagacagagcatgaatttgttgaaaatgttcctcgacgagaaatgccatcagtagcagtaatac |
17745552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 19046958 - 19046872
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataatac |
90 |
Q |
|
|
|||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| | ||| ||||||||||||||| |||||| |
|
|
T |
19046958 |
agaaagaaatggaacaaacaatagagacagagcatgaatttgttgaaaatgttcctcgacgagaaatgccatcagtagcagtaatac |
19046872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 329
Target Start/End: Complemental strand, 28509890 - 28509770
Alignment:
Q |
209 |
tacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagta |
308 |
Q |
|
|
||||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||| || |||||||||||||||| | |||| | ||||||| ||| |
|
|
T |
28509890 |
tacaggagttgatgaatgaacaatcgatggagcaacaacgtctacttggagaagccgattctgccgtcaaaccttctcaggtaaatcaagtaatatcgta |
28509791 |
T |
|
Q |
309 |
ccacctcatcgtgcatataaa |
329 |
Q |
|
|
||||| ||| ||||||||||| |
|
|
T |
28509790 |
ccaccgcattgtgcatataaa |
28509770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 26114127 - 26114053
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaa |
329 |
Q |
|
|
|||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
T |
26114127 |
tggagaaactgatactaccatcaaaccttctcaagaagataatgtaatatagtaccatctcattgtgcatataaa |
26114053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 209 - 325
Target Start/End: Complemental strand, 28480707 - 28480591
Alignment:
Q |
209 |
tacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagta |
308 |
Q |
|
|
||||||||||||||||| ||||| ||||||||| ||||||||| ||||||| ||| || |||||||||||||||| | |||| ||||||||| ||| |
|
|
T |
28480707 |
tacaggagttgatgaatcaacaatctatggagcaacaacgtctacttggagaagccgatactcccgtcaaaccttctcaggtaaatcatgtaatatcgta |
28480608 |
T |
|
Q |
309 |
ccacctcatcgtgcata |
325 |
Q |
|
|
||||| ||| ||||||| |
|
|
T |
28480607 |
ccaccgcattgtgcata |
28480591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 529
Target Start/End: Original strand, 28083122 - 28083173
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28083122 |
caggttagtgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
28083173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 529
Target Start/End: Original strand, 28135494 - 28135545
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28135494 |
caggttagtgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
28135545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 487 - 536
Target Start/End: Complemental strand, 8539670 - 8539621
Alignment:
Q |
487 |
gaaataagtgttgaagaaggaactacatcagctaatgccaagacaaaaac |
536 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
8539670 |
gaaataagtgttgaagaaggaactacatcagctaatgccaatacaaaaac |
8539621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 342
Target Start/End: Original strand, 28082856 - 28082988
Alignment:
Q |
210 |
acaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtac |
309 |
Q |
|
|
|||||||||||||||||||||| |||||| ||| |||||||| |||||||| |||| || |||||||||||| ||| | |||| ||| ||||| ||| |
|
|
T |
28082856 |
acaggagttgatgaatgaacaaacaatggaccaacaacgtctagttggagaaactgatactgccgtcaaaccttttcaggtaaatcatgcaatatcatac |
28082955 |
T |
|
Q |
310 |
cacctcatcgtgcatataaatctaaaaaagaaa |
342 |
Q |
|
|
|| ||| ||||||||||| ||||||| |||| |
|
|
T |
28082956 |
caatacattgtgcatataaagctaaaaatgaaa |
28082988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 27459676 - 27459625
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
27459676 |
ttaaaaataagttgcaactaatttacattttcatgttatgcaagcagttgga |
27459625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 26128879 - 26128809
Alignment:
Q |
259 |
gaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaa |
329 |
Q |
|
|
|||| |||| ||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||| |
|
|
T |
26128879 |
gaaactgatactaccatcaaaccttctcaggaagataatgtaatatagtaccatctcatcgtgcaaataaa |
26128809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 478 - 539
Target Start/End: Complemental strand, 18079199 - 18079138
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaagacaaaaacatc |
539 |
Q |
|
|
||||||| |||||||||||||||| |||||||| |||| |||||||||||||||| |||||| |
|
|
T |
18079199 |
caggttaacgaaataagtgttgaaaaaggaacttcatcggctaatgccaagacaataacatc |
18079138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 28134742 - 28134831
Alignment:
Q |
198 |
tatgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctca |
287 |
Q |
|
|
||||||||| ||||||||||||||||||||||| |||||| ||| ||||| || |||||||| |||| || |||||||||||||||| |
|
|
T |
28134742 |
tatgttcttgttacaggagttgatgaatgaacaatcaatggaccaacaacgttcacttggagaaactgatacttccgtcaaaccttctca |
28134831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 27459794 - 27459738
Alignment:
Q |
258 |
agaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacct |
314 |
Q |
|
|
||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||| |
|
|
T |
27459794 |
agaaactgatgctagcgtcaaaccttctcaggaaaataatgtaatataataccacct |
27459738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 529
Target Start/End: Complemental strand, 17745033 - 17744990
Alignment:
Q |
486 |
cgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
17745033 |
cgaaataagtgttgaagaaggaaccacatcagctaatgccaaga |
17744990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 529
Target Start/End: Complemental strand, 19046353 - 19046310
Alignment:
Q |
486 |
cgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
19046353 |
cgaaataagtgttgaagaaggaaccacatcagctaatgccaaga |
19046310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 28054572 - 28054659
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaa |
342 |
Q |
|
|
||||||||||||| || |||||||||||||||| | |||| ||||| ||| ||||||| ||||||||||||||| |||||| |||| |
|
|
T |
28054572 |
tggagaaattgatactgccgtcaaaccttctcaggtaaatcatgtattattgtaccactgcatcgtgcatataaagataaaaatgaaa |
28054659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 529
Target Start/End: Original strand, 28055917 - 28055968
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
||||||||||||||||||||| |||||||||||||| || |||||||||||| |
|
|
T |
28055917 |
caggttagcgaaataagtgttcaagaaggaactacaacatctaatgccaaga |
28055968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 28064997 - 28065084
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaa |
342 |
Q |
|
|
||||||||||||| || |||||||||||||||| | |||| ||||| ||| ||||||| ||||||||||||||| |||||| |||| |
|
|
T |
28064997 |
tggagaaattgatactgccgtcaaaccttctcaggtaaatcatgtattattgtaccactgcatcgtgcatataaagataaaaatgaaa |
28065084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 529
Target Start/End: Original strand, 28066342 - 28066393
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
||||||||||||||||||||| |||||||||||||| || |||||||||||| |
|
|
T |
28066342 |
caggttagcgaaataagtgttcaagaaggaactacaacatctaatgccaaga |
28066393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 529
Target Start/End: Original strand, 28185312 - 28185363
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |
|
|
T |
28185312 |
caggttagcgaaataagtgttcaagaaggaactacttcatctaatgccaaga |
28185363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 18025315 - 18025265
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgg |
395 |
Q |
|
|
|||||| |||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
18025315 |
ttaaaactatgctgcaactaatttacattttcatgctatgcaatcagttgg |
18025265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 8539883 - 8539835
Alignment:
Q |
348 |
aaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
8539883 |
aaaatatgacgcaactaatttacattttcattttatgcaatcagttgga |
8539835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 27919871 - 27919919
Alignment:
Q |
488 |
aaataagtgttgaagaaggaactacatcagctaatgccaagacaaaaac |
536 |
Q |
|
|
||||| ||||||||||||||| |||||||||||||||||||||||||| |
|
|
T |
27919871 |
aaatatgtgttgaagaaggaatcacatcagctaatgccaagacaaaaac |
27919919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 539
Target Start/End: Complemental strand, 26128007 - 26127956
Alignment:
Q |
488 |
aaataagtgttgaagaaggaactacatcagctaatgccaagacaaaaacatc |
539 |
Q |
|
|
|||||| |||||||||||||||| |||||| |||||||||||||| |||||| |
|
|
T |
26128007 |
aaataaatgttgaagaaggaactgcatcagataatgccaagacaataacatc |
26127956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 539
Target Start/End: Complemental strand, 26178057 - 26178006
Alignment:
Q |
488 |
aaataagtgttgaagaaggaactacatcagctaatgccaagacaaaaacatc |
539 |
Q |
|
|
|||||| |||||||||||||||| |||||| |||||||||||||| |||||| |
|
|
T |
26178057 |
aaataaatgttgaagaaggaactgcatcagataatgccaagacaataacatc |
26178006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 27390884 - 27390833
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||| |||||| ||||||||||||| |||||||||||||||||| ||||||| |
|
|
T |
27390884 |
ttaataatatgctgcaactaatttaaattttcatgttatgcaattagttgga |
27390833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 537
Target Start/End: Original strand, 28149284 - 28149335
Alignment:
Q |
486 |
cgaaataagtgttgaagaaggaactacatcagctaatgccaagacaaaaaca |
537 |
Q |
|
|
||||||||||| |||||||||||| || ||||||||||||||||||| |||| |
|
|
T |
28149284 |
cgaaataagtgctgaagaaggaaccacgtcagctaatgccaagacaataaca |
28149335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 512
Target Start/End: Original strand, 28161470 - 28161504
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactac |
512 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |
|
|
T |
28161470 |
caggttagcgaaataagtgttgaagaaggaactac |
28161504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 11420332 - 11420365
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcat |
378 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |
|
|
T |
11420332 |
ttaaaaatatgttgcaactaatttacattttcat |
11420365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 28005112 - 28005161
Alignment:
Q |
347 |
aaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||| || ||||||||||||||||||||||| |||||||| ||||||| |
|
|
T |
28005112 |
aaaaatctgctgcaactaatttacattttcatgctatgcaattagttgga |
28005161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 26202577 - 26202529
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaata |
303 |
Q |
|
|
|||||||| |||| ||||| ||||||||||||||||| ||||||||||| |
|
|
T |
26202577 |
tggagaaactgatactaccatcaaaccttctcaagaatataatgtaata |
26202529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 28054955 - 28055011
Alignment:
Q |
416 |
attttcttgtattctttttcacactttgtcattacagaaattgaattatactacaat |
472 |
Q |
|
|
|||| |||||||| ||||| ||||||||||| | ||| ||||||||||||||||||| |
|
|
T |
28054955 |
atttgcttgtattttttttaacactttgtcaatgcaggaattgaattatactacaat |
28055011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 28065380 - 28065436
Alignment:
Q |
416 |
attttcttgtattctttttcacactttgtcattacagaaattgaattatactacaat |
472 |
Q |
|
|
|||| |||||||| ||||| ||||||||||| | ||| ||||||||||||||||||| |
|
|
T |
28065380 |
atttgcttgtattttttttaacactttgtcaatgcaggaattgaattatactacaat |
28065436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 18077380 - 18077341
Alignment:
Q |
348 |
aaaatatgttgcaactaatttacattttcatgttatgcaa |
387 |
Q |
|
|
||||||||||||||||||||||| ||||||| |||||||| |
|
|
T |
18077380 |
aaaatatgttgcaactaatttacgttttcattttatgcaa |
18077341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 19476136 - 19476187
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
||||||||||||| |||||||||||||||||| || |||| ||| ||||||| |
|
|
T |
19476136 |
ttaaaaatatgttacaactaatttacattttcttgctatggaattagttgga |
19476187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 26111005 - 26110962
Alignment:
Q |
496 |
gttgaagaaggaactacatcagctaatgccaagacaaaaacatc |
539 |
Q |
|
|
||||||||||||| |||||||||||||||||||| || |||||| |
|
|
T |
26111005 |
gttgaagaaggaaatacatcagctaatgccaagaaaataacatc |
26110962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 26179609 - 26179558
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
||||||||||| ||||||||| ||||||||||||| ||||||| ||||||| |
|
|
T |
26179609 |
ttaaaaatatgctgcaactaacttacattttcatgcaatgcaattagttgga |
26179558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 26233351 - 26233308
Alignment:
Q |
496 |
gttgaagaaggaactacatcagctaatgccaagacaaaaacatc |
539 |
Q |
|
|
||||||||||||| |||||||||||||||||||| || |||||| |
|
|
T |
26233351 |
gttgaagaaggaaatacatcagctaatgccaagaaaataacatc |
26233308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 26236036 - 26235989
Alignment:
Q |
349 |
aaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
||||||| ||||||||||||||||||||||| ||||||| ||||||| |
|
|
T |
26236036 |
aaatatgctgcaactaatttacattttcatgcaatgcaattagttgga |
26235989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 532
Target Start/End: Original strand, 27249808 - 27249843
Alignment:
Q |
497 |
ttgaagaaggaactacatcagctaatgccaagacaa |
532 |
Q |
|
|
||||||||||||| |||||||||||||||||||||| |
|
|
T |
27249808 |
ttgaagaaggaaccacatcagctaatgccaagacaa |
27249843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 27377540 - 27377591
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||||| ||||||||||||| ||||||||| |||||||| ||||||| |
|
|
T |
27377540 |
ttaaaaatattctgcaactaatttatattttcatgctatgcaattagttgga |
27377591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 529
Target Start/End: Complemental strand, 28506945 - 28506894
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
|||||||| ||||||||||| ||| |||| ||||||||||||||||||||| |
|
|
T |
28506945 |
caggttagtgaaataagtgtcgaaaaaggtgctacatcagctaatgccaaga |
28506894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 379
Target Start/End: Complemental strand, 26111237 - 26111203
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatg |
379 |
Q |
|
|
||||||| ||||||||||||||||||||||||||| |
|
|
T |
26111237 |
ttaaaaacatgttgcaactaatttacattttcatg |
26111203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 532
Target Start/End: Complemental strand, 26129309 - 26129267
Alignment:
Q |
490 |
ataagtgttgaagaaggaactacatcagctaatgccaagacaa |
532 |
Q |
|
|
|||| |||||||||||||||| ||||||||||||| ||||||| |
|
|
T |
26129309 |
ataaatgttgaagaaggaactgcatcagctaatgctaagacaa |
26129267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 532
Target Start/End: Complemental strand, 26139951 - 26139909
Alignment:
Q |
490 |
ataagtgttgaagaaggaactacatcagctaatgccaagacaa |
532 |
Q |
|
|
|||| |||||||||||||| |||||||| |||||||||||||| |
|
|
T |
26139951 |
ataaatgttgaagaaggaaatacatcagttaatgccaagacaa |
26139909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 532
Target Start/End: Complemental strand, 26179365 - 26179323
Alignment:
Q |
490 |
ataagtgttgaagaaggaactacatcagctaatgccaagacaa |
532 |
Q |
|
|
|||| |||||||||||||||| |||||| |||||||||||||| |
|
|
T |
26179365 |
ataaatgttgaagaaggaactgcatcagttaatgccaagacaa |
26179323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 379
Target Start/End: Complemental strand, 26205520 - 26205486
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatg |
379 |
Q |
|
|
||||||| ||||||||||||||||||||||||||| |
|
|
T |
26205520 |
ttaaaaacatgttgcaactaatttacattttcatg |
26205486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 379
Target Start/End: Complemental strand, 26233583 - 26233549
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatg |
379 |
Q |
|
|
||||||| ||||||||||||||||||||||||||| |
|
|
T |
26233583 |
ttaaaaacatgttgcaactaatttacattttcatg |
26233549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Complemental strand, 26128252 - 26128207
Alignment:
Q |
348 |
aaaatatgttgcaactaatttacattttcatgttatgcaatcagtt |
393 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||| |||| |
|
|
T |
26128252 |
aaaatataatgcaactaatttacattttcatgctatgcaattagtt |
26128207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 386
Target Start/End: Complemental strand, 26129559 - 26129518
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgca |
386 |
Q |
|
|
||||||||||| ||||||||| ||||||||||||| |||||| |
|
|
T |
26129559 |
ttaaaaatatgctgcaactaaattacattttcatgctatgca |
26129518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Complemental strand, 26178302 - 26178257
Alignment:
Q |
348 |
aaaatatgttgcaactaatttacattttcatgttatgcaatcagtt |
393 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||| |||| |
|
|
T |
26178302 |
aaaatataatgcaactaatttacattttcatgctatgcaattagtt |
26178257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 529
Target Start/End: Complemental strand, 27459410 - 27459377
Alignment:
Q |
496 |
gttgaagaaggaactacatcagctaatgccaaga |
529 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| |
|
|
T |
27459410 |
gttgaagaaggaaccacatcagctaatgccaaga |
27459377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 28003718 - 28003763
Alignment:
Q |
487 |
gaaataagtgttgaagaaggaactacatcagctaatgccaagacaa |
532 |
Q |
|
|
|||| |||||||||||| |||| |||||||||||||||||||||| |
|
|
T |
28003718 |
gaaaaaagtgttgaagatggaatcacatcagctaatgccaagacaa |
28003763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 8539756 - 8539704
Alignment:
Q |
420 |
tcttgtattctttttcacactttgtcattacagaaattgaattatactacaat |
472 |
Q |
|
|
||||||||||||||| ||||||| || | ||| ||||||||||||||||||| |
|
|
T |
8539756 |
tcttgtattctttttaacacttttccaatgcaggaattgaattatactacaat |
8539704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 26111606 - 26111550
Alignment:
Q |
270 |
taccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatat |
326 |
Q |
|
|
|||| ||||||||||||| ||| | ||||||||||||||||| ||||| ||||||| |
|
|
T |
26111606 |
taccatcaaaccttctcaggaagaaaatgtaatatagtaccatctcattatgcatat |
26111550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 26202139 - 26202091
Alignment:
Q |
348 |
aaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||| |||| |||| |
|
|
T |
26202139 |
aaaatataatgcaactaatttacattttcatgctatgcattcagctgga |
26202091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 26205890 - 26205834
Alignment:
Q |
270 |
taccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatat |
326 |
Q |
|
|
|||| ||||||||||||| ||| | ||||||||||||||||| ||||| ||||||| |
|
|
T |
26205890 |
taccatcaaaccttctcaggaagaaaatgtaatatagtaccatctcattatgcatat |
26205834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 26233935 - 26233879
Alignment:
Q |
270 |
taccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatat |
326 |
Q |
|
|
|||| ||||||||||||| ||| | ||||||||||||||||| ||||| ||||||| |
|
|
T |
26233935 |
taccatcaaaccttctcaggaagaaaatgtaatatagtaccatctcattatgcatat |
26233879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 538
Target Start/End: Original strand, 26629186 - 26629234
Alignment:
Q |
490 |
ataagtgttgaagaaggaactacatcagctaatgccaagacaaaaacat |
538 |
Q |
|
|
||||| ||||||||||||| |||||||||||||||||| ||| ||||| |
|
|
T |
26629186 |
ataagcgttgaagaaggaaacacatcagctaatgccaagccaataacat |
26629234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 27459846 - 27459806
Alignment:
Q |
191 |
taattcatatgttcttactacaggagttgatgaatgaacaa |
231 |
Q |
|
|
|||||| |||||||||| |||||||||| |||||||||||| |
|
|
T |
27459846 |
taattcgtatgttcttattacaggagttaatgaatgaacaa |
27459806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 27919476 - 27919512
Alignment:
Q |
191 |
taattcatatgttcttactacaggagttgatgaatga |
227 |
Q |
|
|
||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
27919476 |
taattcatatgttcttattacaggagttgataaatga |
27919512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 472
Target Start/End: Original strand, 28149203 - 28149251
Alignment:
Q |
424 |
gtattctttttcacactttgtcattacagaaattgaattatactacaat |
472 |
Q |
|
|
|||||||||| ||||||||||| | ||| ||||||||||||||||||| |
|
|
T |
28149203 |
gtattcttttgaacactttgtcaatgcaggaattgaattatactacaat |
28149251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 28160356 - 28160436
Alignment:
Q |
200 |
tgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaac |
280 |
Q |
|
|
||||||| ||||||||||||||||||||||| ||||| || ||||||||| ||||||| |||| ||||| |||||| |
|
|
T |
28160356 |
tgttcttgttacaggagttgatgaatgaacaatcgatggaacagcaacgtctacttggagaacctgatactaccatcaaac |
28160436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 4e-58; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 8020551 - 8020707
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtag---caataataccaacaaattc |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||||||| |
|
|
T |
8020551 |
agaaagaaatggaacaaacactagagacagagcatgaatttgttgaaattgttcctcaacaagagatgccatcagtagcaacaatattaccaacaaattc |
8020650 |
T |
|
Q |
101 |
aaaagtaatttgaaggccatgtgaaaatcacttggataaccctctccaaatatatac |
157 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
8020651 |
aaaagtaatttgaaggccatgtgaaaatcacttggatattcctctccaaatatatac |
8020707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 8020711 - 8020799
Alignment:
Q |
418 |
tttcttgtattctttttcacactttgtcattacagaaattgaattatactacaatattgacaggttagcgaaataagtgttgaagaagg |
506 |
Q |
|
|
||||||||||||||||| ||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
8020711 |
tttcttgtattcttttttacactttgtcagtaccggaattgaattataccacaatattgacaggttagcgaaataagtgttgaagaagg |
8020799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 22964958 - 22965083
Alignment:
Q |
32 |
agagcaggaatttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaaagtaatttgaaggccatgtgaaaatcac |
131 |
Q |
|
|
|||||| || |||||||||||||| | | || |||||| |||||| ||| || |||||||||||||| ||||||| |||||||| ||| ||| |||| |
|
|
T |
22964958 |
agagcacgagtttgttgaaaatgttcttgatttagagataccatcattagtgttattaccaacaaattcagaagtaatatgaaggccgtgtcaaattcac |
22965057 |
T |
|
Q |
132 |
ttggataaccctctccaaatatatac |
157 |
Q |
|
|
|| |||| ||||||||||||||||| |
|
|
T |
22965058 |
ttcgatattcctctccaaatatatac |
22965083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 22392469 - 22392520
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||||| ||||||||||||||||||||||| || ||||||||||||| |
|
|
T |
22392469 |
ttaaaaatattctgcaactaatttacattttcatgctacgcaatcagttgga |
22392520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 22399468 - 22399583
Alignment:
Q |
42 |
tttgttgaaaatgtccctcatcaagagatgccatcagtagcaataataccaacaaattcaaaagtaatttgaaggccatgtgaaaatcacttggataacc |
141 |
Q |
|
|
|||||||||||||| | | || |||||| |||||| ||| || |||||||||||||| ||||||| |||||||| ||| ||| |||||| ||| | |
|
|
T |
22399468 |
tttgttgaaaatgttcttgatttagagataccatcattagtgttattaccaacaaattcagaagtaatatgaaggccgtgtcaaattcacttctatattc |
22399567 |
T |
|
Q |
142 |
ctctccaaatatatac |
157 |
Q |
|
|
|||||||||||||||| |
|
|
T |
22399568 |
ctctccaaatatatac |
22399583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 342
Target Start/End: Complemental strand, 8693037 - 8692895
Alignment:
Q |
200 |
tgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataatgt |
299 |
Q |
|
|
||||||| ||||||| ||||||||||||||| ||||| || |||||| || |||||||| |||| | ||| |||||||||||| | |||| |||| |
|
|
T |
8693037 |
tgttcttgttacaggaattgatgaatgaacaatcgatggacaaacaacgtccacttggagaaactgatattgccggcaaaccttctcaggtaaatcatgt |
8692938 |
T |
|
Q |
300 |
aatatagtaccacctcatcgtgcatataaatctaaaaaagaaa |
342 |
Q |
|
|
||||| ||||||| ||| ||||||||||| |||||||||||| |
|
|
T |
8692937 |
aatatcgtaccactgcattgtgcatataaagctaaaaaagaaa |
8692895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 46; Significance: 6e-17; HSPs: 3)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 335
Target Start/End: Original strand, 18459 - 18596
Alignment:
Q |
198 |
tatgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataat |
297 |
Q |
|
|
||||||||| |||||||||||||||||||| || ||| ||||| |||||| || |||||||| |||| | |||||||||||||||| | |||| || |
|
|
T |
18459 |
tatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcat |
18558 |
T |
|
Q |
298 |
gtaatatagtaccacctcatcgtgcatataaatctaaa |
335 |
Q |
|
|
||||||| ||| ||| ||| ||||||||||| ||||| |
|
|
T |
18559 |
gtaatatcctacaaccgcattgtgcatataaagctaaa |
18596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 18697 - 18736
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcag |
517 |
Q |
|
|
|||||||| ||||||||||||||| ||||||||||||||| |
|
|
T |
18697 |
caggttagtgaaataagtgttgaaaaaggaactacatcag |
18736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 18626 - 18672
Alignment:
Q |
426 |
attctttttcacactttgtcattacagaaattgaattatactacaat |
472 |
Q |
|
|
||||||||| ||||||||||| | ||| ||||||||||||||||||| |
|
|
T |
18626 |
attctttttgacactttgtcaatgcaggaattgaattatactacaat |
18672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18010730 - 18010780
Alignment:
Q |
4 |
agaaagaaatggaacaaacactagagacagagcaggaatttgttgaaaatgt |
55 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
T |
18010730 |
agaaagaaatggaacaaacactagagacagagcatgaatttg-tgaaaatgt |
18010780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 518
Target Start/End: Complemental strand, 9328820 - 9328780
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagc |
518 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
9328820 |
caggttagcgaaataagtgttgaagaaggaactgcatcagc |
9328780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 518
Target Start/End: Complemental strand, 9382597 - 9382557
Alignment:
Q |
478 |
caggttagcgaaataagtgttgaagaaggaactacatcagc |
518 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
9382597 |
caggttagcgaaataagtgttgaagaaggaactgcatcagc |
9382557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1142 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold1142
Description:
Target: scaffold1142; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 1332 - 1383
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
||||||||||| ||||||||||||||||||| ||| |||||||| ||||||| |
|
|
T |
1332 |
ttaaaaatatgctgcaactaatttacatttttatggtatgcaattagttgga |
1383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1142; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 1208 - 1286
Alignment:
Q |
255 |
tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatat----agtaccacctcatcgtgcatataaa |
329 |
Q |
|
|
||||||| ||||||||||| ||||||||| || |||| ||||||||||| ||||| ||||||| ||||||||||| |
|
|
T |
1208 |
tggagaacttgatgctaccatcaaaccttgtctggaaactaatgtaatatagccagtactacctcattgtgcatataaa |
1286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 53942 - 53891
Alignment:
Q |
345 |
ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga |
396 |
Q |
|
|
|||||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
53942 |
ttaaaaatattgtgcaactaatttacattttcatgctatgctatcagttgga |
53891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 1348 times since January 2019
Visitors: 8475