View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4418_low_27 (Length: 284)
Name: NF4418_low_27
Description: NF4418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4418_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 31627128 - 31626853
Alignment:
| Q |
1 |
tctcttcacaaataaaacaaaaaaccccaaattcatttaattctatccctaaatgcacaaattcaagctcttagctacacaatgcgccatcgccaacagc |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31627128 |
tctcttcacaaataaaacaaaaaaccccaaattcatttaattctatccctaaatgcacaaattcaagctcttagctacacaatgcgccatcgccaacagc |
31627029 |
T |
|
| Q |
101 |
cccacacgcagtcccaccaccagtcccgtcatccacctccgccgccgcaaaacccttcgcatgttcctcactcgtcctcacgaccgccgccgtttccatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
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| T |
31627028 |
cccacacgcagtcccaccaccagtcccgtcatccacctccgccgccgcaaaaccctccgcatgttcctcactcgtccgcacgaccgccgccgtttccatc |
31626929 |
T |
|
| Q |
201 |
ctcctcccctagatccacctcctccttcctccgatgaagtcaaagtccgccacaagcttaaagacctattcatctc |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
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|
| T |
31626928 |
ctcctcccctagatccacctcctccttcctccgatgaagtcaaagttcgccacaagcttaaagacctattcgtctc |
31626853 |
T |
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