View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4418_low_37 (Length: 244)

Name: NF4418_low_37
Description: NF4418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4418_low_37
NF4418_low_37
[»] chr3 (23 HSPs)
chr3 (20-231)||(3263927-3264138)
chr3 (23-237)||(36528747-36528961)
chr3 (145-231)||(15446832-15446918)
chr3 (145-231)||(16979914-16980000)
chr3 (145-231)||(24177700-24177786)
chr3 (180-231)||(37641468-37641519)
chr3 (157-231)||(52988822-52988896)
chr3 (162-227)||(14967203-14967268)
chr3 (183-231)||(31223816-31223864)
chr3 (131-193)||(16050915-16050977)
chr3 (127-193)||(17044950-17045016)
chr3 (127-193)||(17047110-17047176)
chr3 (127-193)||(22306585-22306651)
chr3 (127-193)||(40807980-40808046)
chr3 (127-193)||(44274402-44274468)
chr3 (128-193)||(12509352-12509417)
chr3 (145-193)||(11563727-11563775)
chr3 (134-193)||(17541425-17541484)
chr3 (127-193)||(40812817-40812883)
chr3 (127-193)||(49900714-49900780)
chr3 (183-221)||(52465345-52465383)
chr3 (145-193)||(22652775-22652823)
chr3 (145-193)||(35960930-35960978)
[»] chr4 (13 HSPs)
chr4 (20-119)||(14185918-14186017)
chr4 (145-231)||(15008965-15009051)
chr4 (129-231)||(40620517-40620620)
chr4 (158-236)||(14186973-14187051)
chr4 (157-224)||(10057675-10057742)
chr4 (127-193)||(15613074-15613140)
chr4 (127-193)||(11425927-11425993)
chr4 (127-193)||(15115206-15115272)
chr4 (127-193)||(25091637-25091703)
chr4 (127-193)||(51993545-51993611)
chr4 (127-193)||(53630476-53630542)
chr4 (127-193)||(10356438-10356504)
chr4 (127-193)||(37019654-37019720)
[»] chr2 (22 HSPs)
chr2 (145-230)||(21080934-21081019)
chr2 (131-231)||(357869-357969)
chr2 (127-231)||(40912304-40912408)
chr2 (145-231)||(21915626-21915712)
chr2 (145-231)||(25184191-25184277)
chr2 (180-231)||(34491204-34491255)
chr2 (171-230)||(34858157-34858216)
chr2 (171-230)||(34873219-34873278)
chr2 (127-193)||(22501954-22502021)
chr2 (127-193)||(22509888-22509955)
chr2 (127-193)||(24516170-24516236)
chr2 (127-193)||(25046101-25046168)
chr2 (127-193)||(2523749-2523815)
chr2 (127-193)||(5031131-5031197)
chr2 (127-193)||(17307470-17307536)
chr2 (129-193)||(24780842-24780906)
chr2 (183-231)||(27484453-27484501)
chr2 (127-193)||(9975913-9975979)
chr2 (197-231)||(18240831-18240865)
chr2 (145-193)||(25142206-25142254)
chr2 (145-193)||(27852670-27852718)
chr2 (127-191)||(37270683-37270747)
[»] chr5 (17 HSPs)
chr5 (131-231)||(30616602-30616702)
chr5 (145-231)||(17011730-17011816)
chr5 (158-231)||(10774628-10774701)
chr5 (131-231)||(31456948-31457048)
chr5 (145-231)||(29448842-29448928)
chr5 (157-231)||(21554267-21554341)
chr5 (162-231)||(21556913-21556982)
chr5 (157-231)||(26832635-26832709)
chr5 (145-193)||(266040-266088)
chr5 (75-193)||(31622047-31622167)
chr5 (127-173)||(19921622-19921668)
chr5 (197-231)||(22240883-22240917)
chr5 (197-231)||(22241879-22241913)
chr5 (197-231)||(22242875-22242909)
chr5 (197-231)||(22243871-22243905)
chr5 (127-191)||(7484986-7485050)
chr5 (145-193)||(20469178-20469226)
[»] scaffold0515 (1 HSPs)
scaffold0515 (145-231)||(5031-5117)
[»] scaffold0306 (1 HSPs)
scaffold0306 (145-231)||(5031-5117)
[»] scaffold0138 (2 HSPs)
scaffold0138 (145-231)||(21099-21185)
scaffold0138 (145-231)||(34114-34200)
[»] scaffold0057 (1 HSPs)
scaffold0057 (145-231)||(69817-69903)
[»] chr8 (17 HSPs)
chr8 (157-231)||(23479096-23479170)
chr8 (159-231)||(19880838-19880910)
chr8 (75-193)||(20397512-20397632)
chr8 (145-231)||(26454710-26454796)
chr8 (157-231)||(17158927-17159001)
chr8 (157-231)||(16198850-16198924)
chr8 (165-231)||(41680097-41680163)
chr8 (180-231)||(22237014-22237065)
chr8 (165-227)||(12577901-12577963)
chr8 (127-193)||(39936009-39936075)
chr8 (127-193)||(42817909-42817975)
chr8 (130-193)||(23419427-23419491)
chr8 (127-193)||(6101755-6101821)
chr8 (127-193)||(20083640-20083706)
chr8 (132-193)||(4380619-4380680)
chr8 (128-193)||(22583662-22583727)
chr8 (145-193)||(20022042-20022090)
[»] chr6 (14 HSPs)
chr6 (145-231)||(15173417-15173503)
chr6 (127-231)||(27329945-27330049)
chr6 (127-231)||(27390685-27390789)
chr6 (145-231)||(15900618-15900704)
chr6 (180-231)||(28103412-28103463)
chr6 (157-231)||(27852220-27852294)
chr6 (127-193)||(15890714-15890780)
chr6 (183-231)||(20733208-20733256)
chr6 (127-193)||(7827956-7828022)
chr6 (127-193)||(19655233-19655299)
chr6 (127-193)||(23150289-23150355)
chr6 (127-193)||(24267833-24267899)
chr6 (128-193)||(12041622-12041688)
chr6 (129-193)||(27572124-27572188)
[»] chr1 (12 HSPs)
chr1 (145-231)||(29763596-29763682)
chr1 (145-231)||(46197709-46197795)
chr1 (131-231)||(12327707-12327807)
chr1 (131-231)||(51336467-51336567)
chr1 (145-223)||(50001478-50001556)
chr1 (171-231)||(21995628-21995688)
chr1 (180-231)||(24007189-24007240)
chr1 (127-193)||(19676695-19676761)
chr1 (127-193)||(21046051-21046117)
chr1 (127-193)||(42697767-42697834)
chr1 (127-193)||(16058316-16058382)
chr1 (127-193)||(42913033-42913099)
[»] scaffold0058 (1 HSPs)
scaffold0058 (157-231)||(6382-6456)
[»] scaffold0034 (1 HSPs)
scaffold0034 (145-231)||(29180-29266)
[»] chr7 (23 HSPs)
chr7 (145-231)||(16549969-16550055)
chr7 (145-231)||(16615607-16615693)
chr7 (145-231)||(29052146-29052232)
chr7 (131-231)||(30820115-30820214)
chr7 (180-231)||(19485937-19485988)
chr7 (127-209)||(13147458-13147540)
chr7 (180-231)||(46579723-46579774)
chr7 (127-193)||(12127165-12127231)
chr7 (127-193)||(8851161-8851227)
chr7 (127-193)||(12372258-12372324)
chr7 (127-193)||(12465262-12465328)
chr7 (127-193)||(20586336-20586402)
chr7 (127-193)||(24269949-24270015)
chr7 (182-231)||(36685110-36685159)
chr7 (145-193)||(35771443-35771491)
chr7 (130-193)||(10658853-10658916)
chr7 (127-193)||(11067452-11067518)
chr7 (127-193)||(12322932-12322998)
chr7 (131-193)||(12754614-12754676)
chr7 (127-193)||(20620270-20620336)
chr7 (127-193)||(32433591-32433657)
chr7 (145-193)||(4071822-4071870)
chr7 (145-193)||(48807327-48807375)
[»] scaffold0436 (1 HSPs)
scaffold0436 (145-230)||(8962-9047)
[»] scaffold0632 (1 HSPs)
scaffold0632 (125-231)||(1147-1253)
[»] scaffold0462 (1 HSPs)
scaffold0462 (145-231)||(11225-11311)
[»] scaffold0083 (1 HSPs)
scaffold0083 (145-231)||(1939-2025)
[»] scaffold0071 (1 HSPs)
scaffold0071 (145-231)||(15274-15360)
[»] scaffold0046 (1 HSPs)
scaffold0046 (157-231)||(21741-21815)
[»] scaffold0819 (1 HSPs)
scaffold0819 (158-231)||(5381-5454)
[»] scaffold0577 (1 HSPs)
scaffold0577 (131-231)||(9048-9147)
[»] scaffold0104 (2 HSPs)
scaffold0104 (127-231)||(14940-15045)
scaffold0104 (127-231)||(16960-17065)
[»] scaffold0156 (1 HSPs)
scaffold0156 (128-231)||(16589-16692)
[»] scaffold1941 (1 HSPs)
scaffold1941 (127-193)||(122-188)
[»] scaffold0671 (1 HSPs)
scaffold0671 (127-193)||(4923-4990)
[»] scaffold0112 (1 HSPs)
scaffold0112 (104-193)||(2848-2939)
[»] scaffold1766 (1 HSPs)
scaffold1766 (127-193)||(698-764)
[»] scaffold1633 (1 HSPs)
scaffold1633 (127-193)||(1189-1255)
[»] scaffold1283 (1 HSPs)
scaffold1283 (127-193)||(470-536)
[»] scaffold0174 (1 HSPs)
scaffold0174 (157-231)||(13651-13725)
[»] scaffold0111 (2 HSPs)
scaffold0111 (127-193)||(12535-12601)
scaffold0111 (127-192)||(5367-5432)
[»] scaffold0077 (1 HSPs)
scaffold0077 (127-193)||(5934-6000)
[»] scaffold0064 (1 HSPs)
scaffold0064 (127-209)||(58730-58812)
[»] scaffold0036 (1 HSPs)
scaffold0036 (127-193)||(78187-78253)
[»] scaffold0019 (1 HSPs)
scaffold0019 (127-193)||(24133-24199)
[»] scaffold0956 (1 HSPs)
scaffold0956 (127-192)||(2539-2604)
[»] scaffold0686 (1 HSPs)
scaffold0686 (178-231)||(1473-1526)
[»] scaffold0379 (1 HSPs)
scaffold0379 (104-191)||(10757-10846)
[»] scaffold0285 (1 HSPs)
scaffold0285 (75-193)||(19683-19803)
[»] scaffold0153 (2 HSPs)
scaffold0153 (171-220)||(5325-5374)
scaffold0153 (171-220)||(12345-12394)
[»] scaffold0802 (1 HSPs)
scaffold0802 (145-193)||(4711-4759)
[»] scaffold0139 (1 HSPs)
scaffold0139 (184-231)||(23575-23622)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-193)||(398545-398612)
[»] scaffold0737 (1 HSPs)
scaffold0737 (127-193)||(4716-4782)
[»] scaffold0207 (1 HSPs)
scaffold0207 (127-193)||(13394-13460)
[»] scaffold0113 (1 HSPs)
scaffold0113 (127-193)||(35474-35540)
[»] scaffold0047 (1 HSPs)
scaffold0047 (127-193)||(79033-79099)
[»] scaffold0020 (2 HSPs)
scaffold0020 (127-193)||(143595-143661)
scaffold0020 (127-193)||(169001-169067)
[»] scaffold0001 (3 HSPs)
scaffold0001 (127-193)||(31978-32044)
scaffold0001 (127-193)||(37285-37351)
scaffold0001 (127-193)||(77671-77737)
[»] scaffold0149 (1 HSPs)
scaffold0149 (128-193)||(29575-29640)
[»] scaffold0256 (1 HSPs)
scaffold0256 (127-187)||(1855-1915)
[»] scaffold0220 (1 HSPs)
scaffold0220 (145-193)||(19956-20004)
[»] scaffold0203 (1 HSPs)
scaffold0203 (145-193)||(17942-17990)
[»] scaffold0037 (1 HSPs)
scaffold0037 (145-193)||(117809-117857)


Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 3264138 - 3263927
Alignment:
Q  20 tagaacaccaattattcatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaatcctaattctcaaattc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3264138 tagaacaccaattattcatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaaccctaattctcaaattc 3264039  T
Q  120 acaacaaaacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctct 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||    
T  3264038 acaacaaaacatgttaaacccaatctcataattatattacttagaattagagaaggttaatccgacccttaccttagtattgatgatcggcggtctctct 3263939  T
Q  220 ccctcttggttc 231  Q
    ||||||||||||    
T  3263938 ccctcttggttc 3263927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 36528747 - 36528961
Alignment:
Q  23 aacaccaattattcatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaatcctaattctcaaattcaca 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  36528747 aacaccaattattcatcaacctactgtatgcaaattcaaaggggttcttaaatctattaacaacctgttacaattctcaaccctaattctcaaattcaca 36528846  T
Q  123 acaaaacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||||||||    
T  36528847 acaaaacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttaccttagtattgatgatcggcggtctctctccc 36528946  T
Q  223 tcttggttcatctca 237  Q
    ||||||||| |||||    
T  36528947 tcttggttcttctca 36528961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 15446918 - 15446832
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||| |||  |||||||||||||||| || | |||||||||||||| | || |||||||||||| |||||||||||||||||||    
T  15446918 tcagaataatacaacttagaattagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccctcttggttc 15446832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 16979914 - 16980000
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | |||||||||||| |||| || | |||||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  16979914 tcagaattaaaatacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcgacggtctctctctctcttggttc 16980000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 24177786 - 24177700
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||  ||||| |||||||||| ||   |||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  24177786 tcagaattatacaacttataattagagaaagtttgtcccacccttaccttagtattgataatcggcggtctctctccctcttggttc 24177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 37641519 - 37641468
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  37641519 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 37641468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 52988896 - 52988822
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||| |||||||  |||||| | || ||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  52988896 tactcagaattattgaaggttagtctcacccttaccttagtattgatgatctgcggtctctctccctcttggttc 52988822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 14967203 - 14967268
Alignment:
Q  162 agaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttg 227  Q
    |||||||  |||||| | |||| ||||||||| | |||||||||||||||||||||||||||||||    
T  14967203 agaattattgaaggttagtcccccccttaccttagtattgatgatcggcggtctctctccctcttg 14967268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 31223864 - 31223816
Alignment:
Q  183 cacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  31223864 cacccttaccttagtattgatgatcggtggtctctctccctcttggttc 31223816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 16050915 - 16050977
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||||| ||||||| |||  |||||||||||||||| || | ||||||||||||||    
T  16050915 tgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttacct 16050977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 17044950 - 17045016
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  17044950 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 17045016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 17047110 - 17047176
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  17047110 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 17047176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 22306651 - 22306585
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  22306651 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 22306585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 40807980 - 40808046
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  40807980 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 40808046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 44274402 - 44274468
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  44274402 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 44274468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 12509417 - 12509352
Alignment:
Q  128 acatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||| ||||| |||||||||||  ||||||||||| |||||||   ||||||||||||||    
T  12509417 acatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttacct 12509352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 11563727 - 11563775
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  ||||||||||||||||||| | ||||||||||||||    
T  11563727 tcagaattataccacttagaattagagaaggttagtcccacccttacct 11563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 17541425 - 17541484
Alignment:
Q  134 taaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  17541425 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 17541484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 40812817 - 40812883
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| ||||||||||   |||||||||||||||| || | ||||||||||||||    
T  40812817 aacatgctaaactcaatttcagaattatgcaacttagaattagagaaagttagtcccacccttacct 40812883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 49900714 - 49900780
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  ||||||||||||||||  | | ||||||||||||||    
T  49900714 aacatgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcccacccttacct 49900780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 52465383 - 52465345
Alignment:
Q  183 cacccttacctcaatattgatgatcggcggtctctctcc 221  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  52465383 cacccttaccttagtattgatgatcggcggtctctctcc 52465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 22652775 - 22652823
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||| ||||||||||||||||||| || | |||||| |||||||    
T  22652775 tcagaattaaattacttagaattagagaaagttagtcccactcttacct 22652823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 35960978 - 35960930
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  || ||||||||||||| || ||||||||||||||||    
T  35960978 tcagaattataccacatagaattagagaaagttaatcccacccttacct 35960930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 14185918 - 14186017
Alignment:
Q  20 tagaacaccaattattcatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaatcc-taattctcaaatt 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  14185918 tagaacaccaattattcatcaacctactgtatgcaaattcaaa-aggttctcaaatctattaacaacctattacaattcttaaaccttaattctcaaatt 14186016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 15008965 - 15009051
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  15008965 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 15009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 40620517 - 40620620
Alignment:
Q  129 catgttaaacccaatct-cagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttg 227  Q
    ||||||||| ||||| | |||||||| | ||||||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||||||||     
T  40620517 catgttaaatccaattttcagaattaaaatacttagaattagagaaagttattcccacccttaccttagtattgatgatcggcggtctctctccctctta 40620616  T
Q  228 gttc 231  Q
    ||||    
T  40620617 gttc 40620620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 14186973 - 14187051
Alignment:
Q  158 acttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttcatctc 236  Q
    |||||||||||||||| || | |||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||    
T  14186973 acttagaattagagaaagttactcccacccttaccttagtattgatgatcggcggtctctctccctcgtggttcttctc 14187051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 10057675 - 10057742
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctc 224  Q
    |||| |||||||  |||||| | |||||||||||||| | ||||||||||||||||||||||||||||    
T  10057675 tactcagaattattgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctc 10057742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 15613074 - 15613140
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| |||||||||||  ||||||||||| ||||||| | ||||||||||||||    
T  15613074 aacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacct 15613140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 11425927 - 11425993
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  11425927 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 11425993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 15115206 - 15115272
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  15115206 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 15115272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 25091637 - 25091703
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  25091637 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 25091703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 51993545 - 51993611
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| ||||||||| |  ||||||||||| ||||||| | ||||||||||||||    
T  51993545 aacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttacct 51993611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 53630542 - 53630476
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  53630542 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 53630476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 10356504 - 10356438
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||| ||||||||    
T  10356504 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaaccttacct 10356438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 37019654 - 37019720
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  ||||| |||||||||| || | || |||||||||||    
T  37019654 aacatgttaaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttacct 37019720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 21081019 - 21080934
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  21081019 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 21080934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 357869 - 357969
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||| |||  |||||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  357869 tgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 357968  T
Q  231 c 231  Q
    |    
T  357969 c 357969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 40912304 - 40912408
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctctt 226  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | |||||||||||||| | |||||||||||||  ||||||||| |||||    
T  40912304 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggttgtctctctctctctt 40912403  T
Q  227 ggttc 231  Q
    |||||    
T  40912404 ggttc 40912408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 21915626 - 21915712
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | || ||||||||| | | |||||||||||||||||||||||||||||||||||    
T  21915626 tcagaattaaaatacttagaattagagaaagttagtcacacccttactttagtattgatgatcggcggtctctctccctcttggttc 21915712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 25184191 - 25184277
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | || ||||||||||| | |||||||||| ||||||||||||||||||| ||||    
T  25184191 tcagaattaaaatacttagaattagagaaagttagtctcacccttaccttagtattgatgattggcggtctctctccctcttcgttc 25184277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 34491255 - 34491204
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34491255 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 34491204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 34858216 - 34858157
Alignment:
Q  171 gaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    |||||| | |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  34858216 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 34858157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 34873278 - 34873219
Alignment:
Q  171 gaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    |||||| | |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  34873278 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 34873219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 22501954 - 22502021
Alignment:
Q  127 aacatgttaaacccaat-ctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| || | ||||||||||||||    
T  22501954 aacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttacct 22502021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 22509888 - 22509955
Alignment:
Q  127 aacatgttaaacccaat-ctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| || | ||||||||||||||    
T  22509888 aacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttacct 22509955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 24516170 - 24516236
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  24516170 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 24516236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 25046101 - 25046168
Alignment:
Q  127 aacatgttaaacccaat-ctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||| ||||||| | ||||||||||||||    
T  25046101 aacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacct 25046168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 2523815 - 2523749
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| | |||||||||  |||||||||||||||| || | ||||||||||||||    
T  2523815 aacatgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttacct 2523749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 5031197 - 5031131
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  5031197 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 5031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 17307470 - 17307536
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  17307470 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 17307536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 24780906 - 24780842
Alignment:
Q  129 catgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  24780906 catgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 24780842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 27484501 - 27484453
Alignment:
Q  183 cacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||| | ||||||||||||| ||| |||||||||||||||||    
T  27484501 cacccttaccttagtattgatgatcggtggtatctctccctcttggttc 27484453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 9975913 - 9975979
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||| ||||||||||    
T  9975913 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccaacccttacct 9975979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 18240831 - 18240865
Alignment:
Q  197 tattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| ||||||||||||||||||||||    
T  18240831 tattgatgatcgacggtctctctccctcttggttc 18240865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 25142206 - 25142254
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  25142206 tcagaattataccacttagaattagagaaagttagtcccacccttacct 25142254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 27852670 - 27852718
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  27852670 tcagaattataccacttagaattagagaaagttagtcccacccttacct 27852718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 37270683 - 37270747
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttac 191  Q
    |||||| ||||| |||| |||||||||||  || ||||||||||||| || | ||||||||||||    
T  37270683 aacatgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 30616602 - 30616702
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||| |||  |||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  30616602 tgttaaatccattttcagaatcatacaacttagaattagagaaagtcagtcccacccttaccataatattgatgatcggcggtctctctccctcttggtt 30616701  T
Q  231 c 231  Q
    |    
T  30616702 c 30616702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 17011730 - 17011816
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  17011730 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccttcttggttc 17011816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 10774701 - 10774628
Alignment:
Q  158 acttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| |||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10774701 acttagaattagtgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 10774628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 31456948 - 31457048
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||| |||  ||||| |||||||||| || | || ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31456948 tgttaaatccagtttcagaatcataccacttaaaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggtt 31457047  T
Q  231 c 231  Q
    |    
T  31457048 c 31457048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 29448842 - 29448928
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||| || | || || | |||||| | ||||||||||||| |||||||||||||||||||||    
T  29448842 tcagaattaaattacttagaattagagaaagttagtctcatcattaccttagtattgatgatcggtggtctctctccctcttggttc 29448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 21554341 - 21554267
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||| |||||||  |||||| | |||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  21554341 tactcagaattactgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccctcttggttc 21554267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 21556982 - 21556913
Alignment:
Q  162 agaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||  |||||| | || ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  21556982 agaattactgaaggttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttc 21556913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 26832635 - 26832709
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||  |||||| | |||||||||||||  | |||||||| || |||||||||||||||||||||||    
T  26832635 tacttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtctctctccctcttggttc 26832709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 266040 - 266088
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||| ||||||||||||||||||| || | ||||||||||||||    
T  266040 tcagaattaaattacttagaattagagaaagttagtcccacccttacct 266088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 31622047 - 31622167
Alignment:
Q  75 tctattaacaacctattacaattctcaatcctaattctcaaattcacaa-caa-aacatgttaaacccaatctcagaattatattacttagaattagaga 172  Q
    ||||||||||||| ||||| | |   || |||||||| |||||| |||| ||| |||||| ||||| |||| |||||||||||  || || |||||||||    
T  31622047 tctattaacaaccaattacgacttcaaaacctaattcccaaatttacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagaga 31622146  T
Q  173 aggtcaatcccacccttacct 193  Q
    | || ||||||||||||||||    
T  31622147 aagttaatcccacccttacct 31622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 19921622 - 19921668
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaa 173  Q
    |||||||||||| |||| |||||||||||  ||||||||||||||||    
T  19921622 aacatgttaaactcaatttcagaattatacaacttagaattagagaa 19921668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 22240917 - 22240883
Alignment:
Q  197 tattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| ||||||||||||||||||||||    
T  22240917 tattgatgatcgacggtctctctccctcttggttc 22240883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 22241913 - 22241879
Alignment:
Q  197 tattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| ||||||||||||||||||||||    
T  22241913 tattgatgatcgacggtctctctccctcttggttc 22241879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 22242909 - 22242875
Alignment:
Q  197 tattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| ||||||||||||||||||||||    
T  22242909 tattgatgatcgacggtctctctccctcttggttc 22242875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 22243905 - 22243871
Alignment:
Q  197 tattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| ||||||||||||||||||||||    
T  22243905 tattgatgatcgacggtctctctccctcttggttc 22243871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 7484986 - 7485050
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttac 191  Q
    |||||| ||||| |||| |||||||||||  || ||||||||||||| || | ||||||||||||    
T  7484986 aacatgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 20469226 - 20469178
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||| |||||| |||||||||||||||| || | ||||||||||||||    
T  20469226 tcagagttatatcacttagaattagagaaagttagtcccacccttacct 20469178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 5031 - 5117
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  5031 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttc 5117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 5031 - 5117
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  5031 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttc 5117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 21099 - 21185
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  21099 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 21185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 34114 - 34200
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34114 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 69903 - 69817
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  69903 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttc 69817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 23479096 - 23479170
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||| || | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23479096 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 23479170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 19880838 - 19880910
Alignment:
Q  159 cttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||| || | |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19880838 cttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 19880910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 20397632 - 20397512
Alignment:
Q  75 tctattaacaaccta-ttacaattctcaatcctaattctcaaattcacaacaa-aacatgttaaacccaatctcagaattatattacttagaattagaga 172  Q
    ||||||||||||||| |||||| | | || |||||||| |||| ||||||||| |||||| ||||| |||| |||||||||||  |||||||||||||||    
T  20397632 tctattaacaacctaattacaactttaaaacctaattcccaaaatcacaacaacaacatgctaaactcaatttcagaattatacaacttagaattagaga 20397533  T
Q  173 aggtcaatcccacccttacct 193  Q
    | || ||||||||||||||||    
T  20397532 aagttaatcccacccttacct 20397512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 26454710 - 26454796
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | ||||||||||||||| ||| |||||||||||||||    
T  26454710 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgatctttctccctcttggttc 26454796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 17159001 - 17158927
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||| || | |||||||||||||| | ||||||||||||| |||||||||||| ||||||||    
T  17159001 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtggtctctctcccccttggttc 17158927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 16198850 - 16198924
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||| || | ||||||  |||||| | ||||||||||||| |||||||||||||||||||||    
T  16198850 tacttagaattagagaaagttagtcccacttttaccttagtattgatgatcggtggtctctctccctcttggttc 16198924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 41680163 - 41680097
Alignment:
Q  165 attagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||| ||||||| | ||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  41680163 attaaagaaggttagtcccacctttaccttagtattgatgatcggcggtctctctccctcttggttc 41680097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 22237065 - 22237014
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  22237065 tcccacccttaccttagtattgatgatcggcggtctctctccttcttggttc 22237014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 12577901 - 12577963
Alignment:
Q  165 attagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttg 227  Q
    ||||||||| || | |||||||||||||| | ||||||||||| || ||||||||||||||||    
T  12577901 attagagaaagttagtcccacccttaccttagtattgatgatcagcagtctctctccctcttg 12577963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 39936075 - 39936009
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| || ||||||||||||||||    
T  39936075 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttacct 39936009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 42817975 - 42817909
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  42817975 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttacct 42817909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 23419427 - 23419491
Alignment:
Q  130 atgttaaacccaat-ctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||| ||||| ||||||||||||  ||||||||||| ||||||| | ||||||||||||||    
T  23419427 atgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacct 23419491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 6101821 - 6101755
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||| ||||||    
T  6101821 aacatgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttacct 6101755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 20083706 - 20083640
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  20083706 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 20083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 4380680 - 4380619
Alignment:
Q  132 gttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||  | |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  4380680 gttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacct 4380619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 22583727 - 22583662
Alignment:
Q  128 acatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||  |||| |||||||||||  || |||||||| |||| || ||||||||||||||||    
T  22583727 acatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttacct 22583662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 20022090 - 20022042
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  20022090 tcagaattataccacttagaattagagaaagttagtcccacccttacct 20022042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 15173503 - 15173417
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | ||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  15173503 tcagaattaaaatacttagaattagagaaagttagtcccaccattaccttagtattgatgatcggcggtctctctccctcttggttc 15173417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 27330049 - 27329945
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctctt 226  Q
    |||||||||||| |||| |||||||||||  || ||||||||||||| || | || ||| ||||||| | |||||||||||||||||||||||||||||     
T  27330049 aacatgttaaactcaatttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctccctctg 27329950  T
Q  227 ggttc 231  Q
    |||||    
T  27329949 ggttc 27329945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 27390789 - 27390685
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctctt 226  Q
    |||||||||||| |||| |||||||||||  || ||||||||||||| || | || ||| ||||||| | |||||||||||||||||||||||||||||     
T  27390789 aacatgttaaactcaatttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctccctctg 27390690  T
Q  227 ggttc 231  Q
    |||||    
T  27390689 ggttc 27390685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 15900704 - 15900618
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| ||   || ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  15900704 tcagaattaaaatacttagaattagagaaagttggtctcacccttaccttagtattgaagatcggcggtctctctccctcttggttc 15900618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 28103463 - 28103412
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  28103463 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 28103412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 27852220 - 27852294
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||| |  |||||| | |||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  27852220 tacttagaatgattgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccctcttggttc 27852294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 15890780 - 15890714
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  15890780 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 15890714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 20733256 - 20733208
Alignment:
Q  183 cacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  20733256 cacccttaccttagtattgatgatcagcggtctctctccctcttggttc 20733208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 7827956 - 7828022
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  7827956 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 7828022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 19655299 - 19655233
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  19655299 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 19655233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 23150355 - 23150289
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  23150355 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 23150289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 24267833 - 24267899
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  24267833 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 24267899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 12041688 - 12041622
Alignment:
Q  128 acatgttaaacccaatct-cagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||| ||||| | ||||||||||  ||||||||||| ||||||| | ||||||||||||||    
T  12041688 acatgttaaatccaattttcagaattatacaacttagaattaaagaaggttagtcccacccttacct 12041622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 27572188 - 27572124
Alignment:
Q  129 catgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||  |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  27572188 catgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacccttacct 27572124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 29763682 - 29763596
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  29763682 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgtcggtctctctccctcttggttc 29763596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 46197795 - 46197709
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||| | |||||||||||| | ||||||||||||||||||||    
T  46197795 tcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgacagtctctctccctcttggttc 46197709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 12327807 - 12327707
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||| |||  |||||||||||||||| || | || ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  12327807 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggtt 12327708  T
Q  231 c 231  Q
    |    
T  12327707 c 12327707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 51336467 - 51336567
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||| |||  |||||||||||||||| || | |||||||||||||| | |||||||||||||||||||| |||||||||||||    
T  51336467 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctccctccctcttggtt 51336566  T
Q  231 c 231  Q
    |    
T  51336567 c 51336567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 50001478 - 50001556
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccct 223  Q
    ||||||||| | |||||||||||| |||| || | |||||||||||||| | |||||||||||||||||||||||||||    
T  50001478 tcagaattaaaatacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccct 50001556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 21995688 - 21995628
Alignment:
Q  171 gaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||| | ||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  21995688 gaaggttagtcccacccttatcttagtattgatgatcggcggtctctctccctcttggttc 21995628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 24007240 - 24007189
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | ||| |||||||| ||||||||||||||||||||||    
T  24007240 tcccacccttaccttagtatagatgatcgacggtctctctccctcttggttc 24007189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 19676695 - 19676761
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  19676695 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 19676761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 21046117 - 21046051
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  21046117 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 21046051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 42697767 - 42697834
Alignment:
Q  127 aacatgttaaacccaat-ctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||| ||||||| | || |||||||||||    
T  42697767 aacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcacccttacct 42697834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 16058382 - 16058316
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  ||||||||||||||||  | | ||||||||||||||    
T  16058382 aacatgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttacct 16058316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 42913033 - 42913099
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  42913033 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 42913099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 6382 - 6456
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||| || | |||||||||||| | | |||||||||||||||||||||||||||||||||||    
T  6382 tacttagaattagagaaagttagtcccacccttacattagtattgatgatcggcggtctctctccctcttggttc 6456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 29266 - 29180
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||| ||||||| | |||||||||||| ||||||||||||||||||||||    
T  29266 tcagaattaaaatacttagaattagagaaagttagtcccactcttaccttagtattgatgatcgacggtctctctccctcttggttc 29180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 16550055 - 16549969
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | ||||| |||||||| | |||||||||||||| ||||||||||||||||||||    
T  16550055 tcagaattaaaatacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctccctcttggttc 16549969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 16615607 - 16615693
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | ||||| |||||||| | |||||||||||||| ||||||||||||||||||||    
T  16615607 tcagaattaaaatacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctccctcttggttc 16615693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 29052232 - 29052146
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | |||||||||||| |||| |||||||||||| ||||    
T  29052232 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgacggtttctctccctcttagttc 29052146  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 30820214 - 30820115
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||||| || ||| |||||||  |||||| | ||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  30820214 tgttaaatccagtttcagaattacat-actcagaattactgaaggttagtcccaccctcaccttagtattgatgatcggcggtctctctccctcttggtt 30820116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 19485988 - 19485937
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19485988 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 19485937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 13147540 - 13147458
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcgg 209  Q
    |||||| ||||| |||| |||||||||||| |||||||||||||||| || | |||||||||||||| ||| | |||||||||    
T  13147540 aacatgctaaactcaatttcagaattatataacttagaattagagaaagttagtcccacccttaccttaatttagatgatcgg 13147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 46579774 - 46579723
Alignment:
Q  180 tcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  46579774 tcccacccttaccttagtattgatgatcggcggtctctctccctattggttc 46579723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 12127231 - 12127165
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  12127231 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 12127165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 8851227 - 8851161
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  8851227 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 8851161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 12372258 - 12372324
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  12372258 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 12372324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 12465328 - 12465262
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  12465328 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 12465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 20586336 - 20586402
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  20586336 aacatggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 20586402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 24270015 - 24269949
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  ||||| |||||||||| || ||||||||||||||||    
T  24270015 aacatgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttacct 24269949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 36685159 - 36685110
Alignment:
Q  182 ccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| | |||||||||||  ||||||||||||||||||||||    
T  36685159 ccacccttaccttagtattgatgatcaacggtctctctccctcttggttc 36685110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 35771491 - 35771443
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||||||||||||||| || | ||||||||||||||    
T  35771491 tcagaattatatcacttagaattagagaaagttagtcccacccttacct 35771443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 10658916 - 10658853
Alignment:
Q  130 atgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||| ||||| ||||||| |||  ||||||||||| ||||||| | ||||||||||||||    
T  10658916 atgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttacct 10658853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 11067452 - 11067518
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  11067452 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 11067518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 12322998 - 12322932
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | | ||||||||||||    
T  12322998 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttacct 12322932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 12754676 - 12754614
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||| ||| | ||||||| |||| |||||||||||||||| || | ||||||||||||||    
T  12754676 tgttaaatccagtttcagaatcatataacttagaattagagaaagttagtcccacccttacct 12754614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 20620270 - 20620336
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | |||||| |||||||    
T  20620270 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttacct 20620336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 32433657 - 32433591
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  32433657 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 32433591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 4071822 - 4071870
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||| |||||| |||||||||||||||| || | ||||||||||||||    
T  4071822 tcagagttatatcacttagaattagagaaagttagtcccacccttacct 4071870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 48807375 - 48807327
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  48807375 tcagaattataccacttagaattagagaaagttagtcccacccttacct 48807327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 8962 - 9047
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||||| | ||||||||||||||||| || | |||||||||||||| | ||||||||||||| |||| |||||||||||||||    
T  8962 tcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtggtcactctccctcttggtt 9047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 1147 - 1253
Alignment:
Q  125 aaaacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctc 224  Q
    |||||||| ||||  |||| |||||||||||  ||||||||||||  || || | || ||||||||||| | ||||||| ||||||||||||||||||||    
T  1147 aaaacatgctaaattcaatttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttagtattgataatcggcggtctctctccctc 1246  T
Q  225 ttggttc 231  Q
    |||||||    
T  1247 ttggttc 1253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 11225 - 11311
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | ||||| ||||||||||| || |  | ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  11225 tcagaattaaaatacttggaattagagaaagttagactcacccttaccttagtattgatgatcggcggtctctctccctcttggttc 11311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 1939 - 2025
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| | |||||||||||||| || || | |||||||||| ||| | ||||||||||||| |||||||||||||||||||||    
T  1939 tcagaattaaaatacttagaattagataaagttagtcccaccctttccttagtattgatgatcggtggtctctctccctcttggttc 2025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 15274 - 15360
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||| |||  |||||||||||||||| || | |||||||||||||| | || |||||||||||| |||||||||||||||||||    
T  15274 tcagaataatacaacttagaattagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccctcttggttc 15360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 21815 - 21741
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||| || | ||||| |||||||| | ||||||||||||| |||||||||||||||||||||    
T  21815 tacttagaattagagaaagttagtcccatccttaccttagtattgatgatcggtggtctctctccctcttggttc 21741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 5381 - 5454
Alignment:
Q  158 acttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||| |||||| | |||||||||||||| |  ||| ||||||||||||||||||||||||||||||    
T  5381 acttagaattagtgaaggttagtcccacccttaccttagaattaatgatcggcggtctctctccctcttggttc 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 9048 - 9147
Alignment:
Q  131 tgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||||| ||| | ||||||||| || ||| |||||||  |||||| | |||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  9048 tgttaaatccagtttcagaattacat-actcagaattactgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctattggtt 9146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 14940 - 15045
Alignment:
Q  127 aacatgttaaacccaatct-cagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctct 225  Q
    ||||||||||| ||||| | ||||||| ||  ||||||||||| | ||| | | ||||||||| |||| | |||||||||||| ||||||||||||||||    
T  14940 aacatgttaaatccaattttcagaattctacaacttagaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctct 15039  T
Q  226 tggttc 231  Q
    ||||||    
T  15040 tggttc 15045  T

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Target: scaffold0104; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 16960 - 17065
Alignment:
Q  127 aacatgttaaacccaatct-cagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctct 225  Q
    ||||||||||| ||||| | ||||||| ||  ||||||||||| | ||| | | ||||||||| |||| | |||||||||||| ||||||||||||||||    
T  16960 aacatgttaaatccaattttcagaattctacaacttagaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctct 17059  T
Q  226 tggttc 231  Q
    ||||||    
T  17060 tggttc 17065  T

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Target: scaffold0156 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 16589 - 16692
Alignment:
Q  128 acatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttg 227  Q
    |||||||||| ||| | ||||||| |||  ||||||||||||| ||  | | ||||||||||  || | |||||||||||| ||||||||||||||||||    
T  16589 acatgttaaatccagtttcagaatcatacaacttagaattagataaatttagtcccaccctttgcttagtattgatgatcgtcggtctctctccctcttg 16688  T
Q  228 gttc 231  Q
    ||||    
T  16689 gttc 16692  T

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Target: scaffold1941 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 122 - 188
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  122 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 188  T

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Target: scaffold0671 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 4923 - 4990
Alignment:
Q  127 aacatgttaaacccaa-tctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| |||| |||||||||||||  ||||||||||| ||||||| | ||||||||||||||    
T  4923 aacatgttaaatccaactctcagaattatacaacttagaattaaagaaggttagtcccacccttacct 4990  T

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Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 2848 - 2939
Alignment:
Q  104 cctaattctcaaattcacaa-caa-aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||| ||||||||||| ||| |||||| ||||| |||| |||||||||||  || || |||||||||| || ||||||||||||||||    
T  2848 cctaattcacaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacct 2939  T

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Target: scaffold1766 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 764 - 698
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||| || | |||||||| |||||    
T  764 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacct 698  T

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Target: scaffold1633 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 1189 - 1255
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  1189 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 1255  T

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Target: scaffold1283 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 536 - 470
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  536 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 470  T

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Target: scaffold0174 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 13651 - 13725
Alignment:
Q  157 tacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||  |||||| | |||||||||||||  | |||||||| || ||||||||||||||| |||||||    
T  13651 tacttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtctctctccctgttggttc 13725  T

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Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 12601 - 12535
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  12601 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttattcccacccttacct 12535  T

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Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 5367 - 5432
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacc 192  Q
    |||||| |||||  ||| |||||||||||  |||||||||||||||| || | |||||||||||||    
T  5367 aacatgctaaacttaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

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Target: scaffold0077 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 5934 - 6000
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||| |||||||||||  ||||||||||| ||||||| | ||||||||||||||    
T  5934 aacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacct 6000  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 58730 - 58812
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacctcaatattgatgatcgg 209  Q
    |||||| ||||| |||| |||||||| ||  |||||||||||||||| || | |||||||||||||| ||| | |||||||||    
T  58730 aacatgctaaactcaatttcagaattgtacaacttagaattagagaaagttagtcccacccttaccttaatttagatgatcgg 58812  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 78253 - 78187
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  78253 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 78187  T

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Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 24199 - 24133
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  24199 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacct 24133  T

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Target: scaffold0956 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 2539 - 2604
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacc 192  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | |||||||||||||    
T  2539 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 2604  T

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Target: scaffold0686 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 1473 - 1526
Alignment:
Q  178 aatcccacccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||| | |||||||||||||||| || ||||||| |||||||    
T  1473 aatcccacccttaccttagtattgatgatcggcggcctgtctcccttttggttc 1526  T

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Target: scaffold0379 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 10757 - 10846
Alignment:
Q  104 cctaattctcaaattcacaa-caa-aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttac 191  Q
    |||||||| ||||||||||| ||| |||||| ||||| |||| |||||||||||  || || |||||||||| || ||||||||||||||    
T  10757 cctaattcccaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttac 10846  T

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Target: scaffold0285 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 19683 - 19803
Alignment:
Q  75 tctattaacaacctattacaattctcaatcctaattctcaaattcacaac--aaaacatgttaaacccaatctcagaattatattacttagaattagaga 172  Q
    ||||||||||||| ||||||| |   || |||||||| |||||||||| |  | ||| || ||||| |||| | |||||||||  |||||||||||||||    
T  19683 tctattaacaaccaattacaacttaaaaacctaattcccaaattcacagcctacaacttgctaaactcaatttgagaattatacaacttagaattagaga 19782  T
Q  173 aggtcaatcccacccttacct 193  Q
    | |||| || |||||||||||    
T  19783 aagtcagtctcacccttacct 19803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 5325 - 5374
Alignment:
Q  171 gaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctc 220  Q
    |||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  5325 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 12345 - 12394
Alignment:
Q  171 gaaggtcaatcccacccttacctcaatattgatgatcggcggtctctctc 220  Q
    |||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  12345 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctc 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 4759 - 4711
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||||||||||||||| || | ||||||||||||||    
T  4759 tcagaattatactacttagaattagagaaagttagtcccacccttacct 4711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 23575 - 23622
Alignment:
Q  184 acccttacctcaatattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||| | |||||||||||||| |||||| |||||||||||||    
T  23575 acccttaccttagtattgatgatcggcagtctctttccctcttggttc 23622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 398545 - 398612
Alignment:
Q  127 aacatgttaaacccaat-ctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||||||||| ||||| ||||||||||||  || |||||||| ||||||| | ||||||||||||||    
T  398545 aacatgttaaatccaattctcagaattatacaacctagaattaaagaaggttagtcccacccttacct 398612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 4782 - 4716
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | ||| ||||||||||    
T  4782 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccgacccttacct 4716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 13460 - 13394
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||| ||||||||||| || | ||||||||||||||    
T  13460 aacatgctaaactcaatttcagaattatacaacttggaattagagaaagttagtcccacccttacct 13394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 35474 - 35540
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  35474 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 35540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 79033 - 79099
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  79033 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 79099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 143595 - 143661
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  143595 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacct 143661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 169067 - 169001
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | |||||||| |||||    
T  169067 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacct 169001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 31978 - 32044
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  31978 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacct 32044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 37285 - 37351
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  37285 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacct 37351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 77671 - 77737
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| || | || |||||||||||    
T  77671 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacct 77737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 29640 - 29575
Alignment:
Q  128 acatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||| ||||| |||| |||||||||||  ||||||||||| |||| || | ||||||||||||||    
T  29640 acatgctaaactcaatttcagaattatacaacttagaattatagaaagttagtcccacccttacct 29575  T

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Target: scaffold0256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 1915 - 1855
Alignment:
Q  127 aacatgttaaacccaatctcagaattatattacttagaattagagaaggtcaatcccaccc 187  Q
    |||||||||||  |||| |||||||||||  |||||||||||||||| || | ||||||||    
T  1915 aacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

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Target: scaffold0220 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 19956 - 20004
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  19956 tcagaattataacacttagaattagagaaagttagtcccacccttacct 20004  T

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Target: scaffold0203 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 17990 - 17942
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    |||||||||||  |||||||||||||||| || | ||||||||||||||    
T  17990 tcagaattatacaacttagaattagagaaagttagtcccacccttacct 17942  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 117857 - 117809
Alignment:
Q  145 tcagaattatattacttagaattagagaaggtcaatcccacccttacct 193  Q
    ||||| |||||| |||||||||||||||| || | ||||||||||||||    
T  117857 tcagagttatatcacttagaattagagaaagttagtcccacccttacct 117809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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