View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4418_low_45 (Length: 202)
Name: NF4418_low_45
Description: NF4418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4418_low_45 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 4904027 - 4903851
Alignment:
| Q |
10 |
actgatatgaaagtgttaacacttatgttgagattaatcaaatcacagagctagtacaagttgtcctcacatggtaggtgacctcacatgatcctataaa |
109 |
Q |
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| T |
4904027 |
actgatatgaaagtgttaacacttatgttgagattaatcaaatcacagagctagtacaagttgtcctcacatgataggtgacctcacatgatcctataaa |
4903928 |
T |
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| Q |
110 |
aaacgtggttgtccttaatgtggagttggtaatataggtgtgttgtgggttccattgtttggttagaataggtagtg |
186 |
Q |
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| T |
4903927 |
aaacgtggttgtccttaatgtggagttggtaatataggtgtattgtgggttccattgtttggttagaataggtagtg |
4903851 |
T |
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