View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4539_high_7 (Length: 267)
Name: NF4539_high_7
Description: NF4539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4539_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 45793677 - 45793425
Alignment:
| Q |
1 |
actcagagcacataatatactatactcctaaattctaaattatatccccaaacgcataccaatagtcagttaatataccaatcaaatctccaactctgaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
45793677 |
actcagagcacataatatactatactcctaaattctaaattatatccccaaacgcataccaatagtcagttaatataccaaccaaatctccaactctgaa |
45793578 |
T |
|
| Q |
101 |
aaacatggcagccaagactatgaaaaaatggcaatctagtactctaatcggcttagctttagatttgttaagaaaaataattgaaatttaacatttaaca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45793577 |
aaacatggcagccaagactatgaaaaaatggcaatctagtactctaatcggcttagctttagatttgttaagaaaaataattgaaatttaacatttaaca |
45793478 |
T |
|
| Q |
201 |
gttaaagccttttaccttcccaattactctctcattattagtccaaaaatttg |
253 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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|
| T |
45793477 |
gttaaagccttttaccttccgaattactctctcattattagtccaaaaatttg |
45793425 |
T |
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