View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4543-Insertion-1 (Length: 1060)

Name: NF4543-Insertion-1
Description: NF4543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4543-Insertion-1
NF4543-Insertion-1
[»] chr7 (54 HSPs)
chr7 (153-660)||(13307493-13308010)
chr7 (732-1053)||(13308016-13308336)
chr7 (8-83)||(21172051-21172128)
chr7 (8-83)||(10693115-10693192)
chr7 (8-83)||(32758275-32758352)
chr7 (8-83)||(42391142-42391219)
chr7 (8-83)||(2541061-2541140)
chr7 (8-75)||(2662985-2663054)
chr7 (8-83)||(34626250-34626328)
chr7 (8-84)||(27629648-27629728)
chr7 (8-80)||(42476887-42476961)
chr7 (28-83)||(48735164-48735219)
chr7 (8-83)||(11741809-11741886)
chr7 (8-83)||(31591151-31591228)
chr7 (8-81)||(33871954-33872030)
chr7 (8-83)||(35334858-35334935)
chr7 (8-83)||(47716473-47716554)
chr7 (32-83)||(7879680-7879731)
chr7 (8-80)||(11617633-11617709)
chr7 (32-83)||(19265856-19265907)
chr7 (8-80)||(23419719-23419795)
chr7 (13-83)||(38604546-38604619)
chr7 (8-83)||(42805538-42805619)
chr7 (8-83)||(46354208-46354289)
chr7 (8-80)||(13805116-13805191)
chr7 (8-83)||(18512495-18512573)
chr7 (32-83)||(19266492-19266543)
chr7 (8-82)||(28078175-28078252)
chr7 (32-83)||(42798711-42798762)
chr7 (8-83)||(1408471-1408550)
chr7 (32-82)||(14099049-14099099)
chr7 (32-82)||(14409066-14409116)
chr7 (8-75)||(19426939-19427010)
chr7 (39-81)||(28362189-28362231)
chr7 (32-81)||(8148989-8149038)
chr7 (42-83)||(27889358-27889399)
chr7 (8-83)||(43557486-43557567)
chr7 (8-81)||(47077899-47077974)
chr7 (8-78)||(48123531-48123605)
chr7 (32-83)||(35787311-35787362)
chr7 (32-79)||(40463918-40463965)
chr7 (36-80)||(18747533-18747577)
chr7 (8-81)||(32233179-32233255)
chr7 (8-80)||(7644970-7645047)
chr7 (32-83)||(16341320-16341372)
chr7 (32-83)||(17048857-17048909)
chr7 (39-82)||(23231606-23231649)
chr7 (8-83)||(29907433-29907513)
chr7 (81-112)||(32758365-32758396)
chr7 (32-82)||(21139791-21139841)
chr7 (32-75)||(22699018-22699063)
chr7 (15-79)||(23619023-23619088)
chr7 (33-83)||(33500556-33500608)
chr7 (8-82)||(38262239-38262317)
[»] chr2 (44 HSPs)
chr2 (8-83)||(22371071-22371147)
chr2 (12-83)||(9671199-9671272)
chr2 (8-83)||(21779303-21779380)
chr2 (10-83)||(36871509-36871585)
chr2 (8-83)||(8455358-8455437)
chr2 (8-83)||(12023961-12024039)
chr2 (8-79)||(23397780-23397853)
chr2 (8-83)||(10546176-10546256)
chr2 (8-83)||(14444743-14444821)
chr2 (8-82)||(25249781-25249858)
chr2 (8-83)||(10543712-10543793)
chr2 (8-83)||(14530332-14530413)
chr2 (8-83)||(24200665-24200746)
chr2 (32-81)||(32781332-32781381)
chr2 (8-82)||(17623578-17623656)
chr2 (8-79)||(99311-99384)
chr2 (32-82)||(21377116-21377166)
chr2 (8-79)||(17668016-17668091)
chr2 (32-80)||(5450328-5450376)
chr2 (32-83)||(4516393-4516444)
chr2 (32-79)||(17896302-17896349)
chr2 (32-83)||(23145740-23145791)
chr2 (32-83)||(23557530-23557581)
chr2 (32-83)||(24890453-24890504)
chr2 (32-83)||(25079759-25079810)
chr2 (8-82)||(25641516-25641593)
chr2 (12-75)||(11514454-11514521)
chr2 (32-82)||(25632551-25632601)
chr2 (14-80)||(40762279-40762349)
chr2 (32-81)||(44643565-44643614)
chr2 (39-83)||(13245137-13245181)
chr2 (32-80)||(39914350-39914398)
chr2 (32-83)||(44449425-44449477)
chr2 (9-75)||(30826052-30826121)
chr2 (32-82)||(19977757-19977807)
chr2 (8-70)||(27573635-27573700)
chr2 (39-82)||(26684663-26684706)
chr2 (32-83)||(5841070-5841123)
chr2 (32-78)||(31821390-31821436)
chr2 (32-81)||(33795327-33795376)
chr2 (32-78)||(39499277-39499323)
chr2 (32-69)||(2003592-2003629)
chr2 (81-110)||(23397870-23397899)
chr2 (32-81)||(44521417-44521466)
[»] chr8 (49 HSPs)
chr8 (8-83)||(12670292-12670369)
chr8 (8-83)||(30454139-30454216)
chr8 (8-83)||(36720810-36720889)
chr8 (8-83)||(13160716-13160794)
chr8 (8-83)||(45071279-45071357)
chr8 (8-83)||(28817668-28817747)
chr8 (32-83)||(29877136-29877187)
chr8 (8-83)||(5135331-5135410)
chr8 (29-83)||(19729379-19729433)
chr8 (9-110)||(23000228-23000338)
chr8 (8-81)||(29521729-29521806)
chr8 (32-80)||(44530191-44530239)
chr8 (8-83)||(20869542-20869617)
chr8 (28-110)||(23286337-23286422)
chr8 (8-81)||(26954146-26954226)
chr8 (8-83)||(7136569-7136650)
chr8 (32-80)||(35261721-35261769)
chr8 (32-83)||(8897806-8897857)
chr8 (36-83)||(24365101-24365148)
chr8 (8-81)||(2626533-2626613)
chr8 (36-82)||(5689677-5689723)
chr8 (8-79)||(6760836-6760913)
chr8 (8-83)||(20284111-20284194)
chr8 (8-83)||(39461036-39461117)
chr8 (8-81)||(8483982-8484059)
chr8 (8-83)||(12625903-12625983)
chr8 (8-82)||(17823590-17823668)
chr8 (32-81)||(43942366-43942417)
chr8 (32-79)||(44742564-44742612)
chr8 (32-80)||(20869965-20870015)
chr8 (8-83)||(21070739-21070823)
chr8 (8-64)||(18164821-18164880)
chr8 (32-80)||(10857871-10857919)
chr8 (8-82)||(25250536-25250616)
chr8 (37-77)||(26457776-26457816)
chr8 (32-78)||(389687-389733)
chr8 (32-82)||(11000992-11001042)
chr8 (32-83)||(16225061-16225114)
chr8 (8-82)||(17250918-17250998)
chr8 (51-83)||(26102578-26102610)
chr8 (8-108)||(35105937-35106040)
chr8 (32-83)||(22598199-22598250)
chr8 (81-112)||(26102623-26102654)
chr8 (42-81)||(31457224-31457263)
chr8 (8-64)||(44781567-44781627)
chr8 (81-114)||(10857935-10857968)
chr8 (81-122)||(27037654-27037695)
chr8 (32-65)||(36918166-36918199)
chr8 (8-82)||(42083741-42083820)
[»] chr6 (28 HSPs)
chr6 (8-83)||(1354799-1354876)
chr6 (8-83)||(1346978-1347055)
chr6 (12-83)||(26097178-26097251)
chr6 (8-81)||(28007642-28007717)
chr6 (12-83)||(25557743-25557816)
chr6 (8-83)||(29355897-29355978)
chr6 (8-79)||(23240870-23240943)
chr6 (8-83)||(12221957-12222038)
chr6 (32-76)||(1941897-1941941)
chr6 (8-79)||(9161137-9161213)
chr6 (12-83)||(7947413-7947489)
chr6 (8-81)||(32579440-32579516)
chr6 (8-75)||(33138847-33138918)
chr6 (8-83)||(2166452-2166533)
chr6 (8-83)||(2178085-2178166)
chr6 (32-83)||(15866081-15866130)
chr6 (81-115)||(25557829-25557863)
chr6 (81-115)||(25997755-25997789)
chr6 (81-115)||(26097264-26097298)
chr6 (32-80)||(15865902-15865948)
chr6 (46-82)||(3815120-3815156)
chr6 (81-112)||(1347068-1347099)
chr6 (15-80)||(18277238-18277307)
chr6 (32-70)||(13905034-13905072)
chr6 (32-83)||(24097623-24097670)
chr6 (32-83)||(24734684-24734737)
chr6 (8-58)||(8409257-8409311)
chr6 (32-61)||(14341134-14341163)
[»] chr5 (37 HSPs)
chr5 (8-83)||(32703438-32703515)
chr5 (8-83)||(8170026-8170103)
chr5 (9-83)||(7368413-7368489)
chr5 (8-83)||(35710327-35710404)
chr5 (8-80)||(41014333-41014408)
chr5 (8-83)||(19142985-19143063)
chr5 (8-83)||(24448904-24448983)
chr5 (8-83)||(38879595-38879676)
chr5 (31-83)||(34154856-34154908)
chr5 (8-83)||(43334216-43334298)
chr5 (32-83)||(43574648-43574699)
chr5 (8-83)||(4619146-4619227)
chr5 (8-83)||(13801809-13801890)
chr5 (8-82)||(27328766-27328846)
chr5 (32-79)||(2838820-2838867)
chr5 (32-83)||(16880689-16880740)
chr5 (32-82)||(7097803-7097853)
chr5 (32-81)||(41425990-41426039)
chr5 (13-83)||(20135623-20135699)
chr5 (35-83)||(22600499-22600547)
chr5 (32-83)||(3771381-3771432)
chr5 (34-84)||(30006369-30006419)
chr5 (8-55)||(37024626-37024675)
chr5 (14-83)||(29334415-29334489)
chr5 (41-83)||(12477162-12477205)
chr5 (8-80)||(208972-209048)
chr5 (41-83)||(1565483-1565525)
chr5 (8-77)||(22907913-22907985)
chr5 (50-83)||(16957374-16957407)
chr5 (32-79)||(9794424-9794471)
chr5 (40-82)||(11657742-11657785)
chr5 (81-112)||(16028622-16028653)
chr5 (81-112)||(35710417-35710448)
chr5 (81-111)||(32703528-32703558)
chr5 (47-80)||(1405244-1405277)
chr5 (31-83)||(39301164-39301217)
chr5 (81-114)||(43334310-43334343)
[»] chr4 (61 HSPs)
chr4 (8-83)||(47528572-47528649)
chr4 (8-83)||(48598867-48598944)
chr4 (8-83)||(9832355-9832432)
chr4 (8-83)||(20224998-20225075)
chr4 (8-83)||(5648273-5648351)
chr4 (8-83)||(29207940-29208017)
chr4 (8-83)||(5306706-5306784)
chr4 (8-81)||(17043438-17043515)
chr4 (8-83)||(47443971-47444050)
chr4 (8-83)||(6430668-6430746)
chr4 (8-81)||(8473666-8473741)
chr4 (8-83)||(30639394-30639472)
chr4 (8-83)||(40915843-40915921)
chr4 (14-82)||(49796818-49796889)
chr4 (11-83)||(20639700-20639777)
chr4 (12-82)||(7909324-7909397)
chr4 (8-83)||(11054190-11054267)
chr4 (8-69)||(39077852-39077915)
chr4 (8-81)||(54175077-54175155)
chr4 (32-83)||(25629091-25629142)
chr4 (32-83)||(30690218-30690269)
chr4 (32-83)||(51865080-51865131)
chr4 (8-80)||(9987879-9987955)
chr4 (32-78)||(19027890-19027936)
chr4 (32-82)||(35567212-35567262)
chr4 (8-83)||(16408643-16408724)
chr4 (8-83)||(16911576-16911657)
chr4 (8-81)||(41018838-41018914)
chr4 (35-83)||(20225119-20225169)
chr4 (8-81)||(21646978-21647057)
chr4 (36-83)||(47441572-47441619)
chr4 (32-83)||(23501829-23501882)
chr4 (8-83)||(25463136-25463215)
chr4 (8-83)||(30496364-30496441)
chr4 (32-82)||(13256442-13256494)
chr4 (8-78)||(37494865-37494939)
chr4 (8-83)||(44363172-44363253)
chr4 (12-81)||(10277801-10277872)
chr4 (39-82)||(20908679-20908723)
chr4 (32-83)||(30581507-30581559)
chr4 (32-79)||(12711495-12711542)
chr4 (8-74)||(14590851-14590922)
chr4 (32-83)||(14983876-14983927)
chr4 (8-83)||(32478833-32478906)
chr4 (8-83)||(7385518-7385597)
chr4 (8-82)||(21489101-21489180)
chr4 (32-82)||(54967063-54967112)
chr4 (33-83)||(55766508-55766558)
chr4 (31-80)||(17079696-17079745)
chr4 (32-64)||(25343229-25343261)
chr4 (32-83)||(35894503-35894555)
chr4 (81-112)||(38786715-38786746)
chr4 (40-82)||(4222071-4222113)
chr4 (32-83)||(20405129-20405182)
chr4 (33-83)||(55830763-55830813)
chr4 (31-81)||(16494258-16494310)
chr4 (81-110)||(20225088-20225117)
chr4 (54-83)||(38786673-38786702)
chr4 (32-82)||(48327806-48327858)
chr4 (8-81)||(49938637-49938711)
chr4 (81-114)||(56323006-56323039)
[»] scaffold0168 (2 HSPs)
scaffold0168 (8-83)||(30593-30670)
scaffold0168 (81-112)||(30683-30714)
[»] chr3 (60 HSPs)
chr3 (8-83)||(1217126-1217203)
chr3 (8-83)||(22122959-22123036)
chr3 (8-83)||(31592885-31592962)
chr3 (8-83)||(39203552-39203629)
chr3 (8-83)||(16735477-16735555)
chr3 (8-83)||(22609802-22609880)
chr3 (28-83)||(15797280-15797335)
chr3 (8-83)||(26869743-26869821)
chr3 (28-83)||(34771406-34771461)
chr3 (8-83)||(40272854-40272933)
chr3 (32-83)||(47624105-47624156)
chr3 (8-83)||(26573163-26573242)
chr3 (32-112)||(4495674-4495757)
chr3 (8-83)||(29366762-29366843)
chr3 (8-83)||(46421077-46421158)
chr3 (8-81)||(12914079-12914156)
chr3 (8-83)||(13628832-13628913)
chr3 (12-83)||(54484730-54484806)
chr3 (8-83)||(34420685-34420765)
chr3 (8-81)||(6411866-6411942)
chr3 (8-67)||(7696945-7697006)
chr3 (8-80)||(10795468-10795546)
chr3 (8-83)||(13730644-13730725)
chr3 (8-83)||(14986993-14987074)
chr3 (8-111)||(54032570-54032680)
chr3 (32-83)||(353391-353444)
chr3 (8-80)||(33926119-33926195)
chr3 (32-83)||(45786256-45786309)
chr3 (32-83)||(49013515-49013568)
chr3 (8-83)||(8247729-8247810)
chr3 (11-79)||(8410913-8410983)
chr3 (32-83)||(9276328-9276378)
chr3 (40-83)||(52926261-52926304)
chr3 (14-110)||(31831241-31831343)
chr3 (32-81)||(53996609-53996659)
chr3 (8-78)||(7943026-7943100)
chr3 (8-72)||(45620881-45620950)
chr3 (32-76)||(31904906-31904950)
chr3 (32-83)||(54374387-54374439)
chr3 (8-81)||(9607239-9607318)
chr3 (44-83)||(25517212-25517251)
chr3 (32-79)||(45948884-45948931)
chr3 (81-115)||(1217216-1217250)
chr3 (28-82)||(26292390-26292444)
chr3 (8-83)||(30928189-30928268)
chr3 (8-81)||(516445-516525)
chr3 (32-77)||(33235596-33235641)
chr3 (8-75)||(43114918-43114991)
chr3 (35-81)||(45139520-45139568)
chr3 (35-76)||(52428526-52428567)
chr3 (8-81)||(19731038-19731115)
chr3 (8-81)||(25944505-25944583)
chr3 (8-81)||(19751614-19751691)
chr3 (8-79)||(55401212-55401288)
chr3 (82-112)||(15797349-15797379)
chr3 (81-111)||(30452923-30452953)
chr3 (83-112)||(6242283-6242312)
chr3 (8-52)||(10870025-10870072)
chr3 (81-110)||(31592975-31593004)
chr3 (81-114)||(54484819-54484852)
[»] chr1 (62 HSPs)
chr1 (8-83)||(34725140-34725217)
chr1 (8-83)||(35253229-35253306)
chr1 (8-81)||(32632601-32632677)
chr1 (8-79)||(38478328-38478401)
chr1 (9-83)||(12126879-12126955)
chr1 (8-81)||(47214548-47214623)
chr1 (32-83)||(4349703-4349754)
chr1 (8-83)||(6983853-6983930)
chr1 (8-83)||(46247995-46248074)
chr1 (29-82)||(19414499-19414552)
chr1 (8-83)||(30395768-30395849)
chr1 (12-80)||(31382259-31382330)
chr1 (8-81)||(23768364-23768441)
chr1 (9-82)||(41319849-41319926)
chr1 (8-81)||(45812581-45812656)
chr1 (32-79)||(10378781-10378828)
chr1 (8-83)||(18724587-18724666)
chr1 (8-83)||(46991841-46991920)
chr1 (8-80)||(11596550-11596625)
chr1 (8-83)||(14617075-14617154)
chr1 (8-83)||(18944680-18944761)
chr1 (8-83)||(27201684-27201765)
chr1 (35-82)||(15505632-15505679)
chr1 (8-83)||(6925137-6925216)
chr1 (32-83)||(19932795-19932848)
chr1 (8-81)||(20004134-20004213)
chr1 (32-82)||(21910692-21910742)
chr1 (8-83)||(10668262-10668343)
chr1 (32-81)||(18742001-18742052)
chr1 (32-83)||(31442431-31442483)
chr1 (33-81)||(43768205-43768253)
chr1 (39-83)||(44485151-44485195)
chr1 (8-81)||(25468307-25468384)
chr1 (8-78)||(2435833-2435908)
chr1 (32-83)||(35005188-35005241)
chr1 (8-81)||(45402131-45402210)
chr1 (8-80)||(22930114-22930188)
chr1 (8-80)||(17470390-17470467)
chr1 (8-83)||(27474318-27474396)
chr1 (8-83)||(35117808-35117889)
chr1 (32-79)||(1517357-1517404)
chr1 (32-71)||(4430080-4430119)
chr1 (13-81)||(23796507-23796579)
chr1 (32-83)||(42304249-42304302)
chr1 (8-64)||(22324930-22324989)
chr1 (32-80)||(27136696-27136745)
chr1 (9-76)||(33223022-33223093)
chr1 (32-80)||(20999895-20999943)
chr1 (32-79)||(8197108-8197155)
chr1 (8-79)||(45264445-45264521)
chr1 (32-82)||(50812005-50812055)
chr1 (48-82)||(4249486-4249520)
chr1 (48-82)||(4249810-4249844)
chr1 (48-82)||(4250134-4250168)
chr1 (44-78)||(4430046-4430080)
chr1 (36-81)||(6358190-6358236)
chr1 (9-80)||(15511193-15511271)
chr1 (81-111)||(19414566-19414596)
chr1 (37-83)||(20036291-20036337)
chr1 (15-68)||(21723728-21723784)
chr1 (13-80)||(34149005-34149076)
chr1 (32-73)||(46859131-46859173)
[»] scaffold0015 (1 HSPs)
scaffold0015 (15-83)||(48676-48746)
[»] scaffold0187 (2 HSPs)
scaffold0187 (8-83)||(10092-10169)
scaffold0187 (8-83)||(20420-20497)
[»] scaffold0223 (1 HSPs)
scaffold0223 (8-83)||(11145-11222)
[»] scaffold0057 (3 HSPs)
scaffold0057 (8-78)||(43673-43745)
scaffold0057 (32-82)||(24815-24865)
scaffold0057 (32-83)||(46873-46924)
[»] scaffold1176 (1 HSPs)
scaffold1176 (8-83)||(1629-1706)
[»] scaffold0258 (1 HSPs)
scaffold0258 (8-81)||(13068-13144)
[»] scaffold0180 (1 HSPs)
scaffold0180 (38-83)||(24175-24220)
[»] scaffold0036 (1 HSPs)
scaffold0036 (32-80)||(35062-35110)
[»] scaffold0311 (1 HSPs)
scaffold0311 (32-83)||(10852-10903)
[»] scaffold0049 (1 HSPs)
scaffold0049 (8-81)||(58991-59070)
[»] scaffold0018 (1 HSPs)
scaffold0018 (32-83)||(72909-72960)
[»] scaffold0005 (1 HSPs)
scaffold0005 (8-74)||(226456-226527)
[»] scaffold0167 (1 HSPs)
scaffold0167 (32-81)||(23641-23690)
[»] scaffold0954 (1 HSPs)
scaffold0954 (39-82)||(3593-3636)
[»] scaffold0254 (1 HSPs)
scaffold0254 (8-83)||(4171-4253)


Alignment Details
Target: chr7 (Bit Score: 364; Significance: 0; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 153 - 660
Target Start/End: Original strand, 13307493 - 13308010
Alignment:
Q  153 ttcaattgtatcttggtttcataaaacaaaaaatttgggacagaaataataagctgaaaagactaaagattagggacggaagaagtagctattatgcaca 252  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  13307493 ttcaattgtatcttggtttcataaaaaaaaaa--ttgggacagaaataaaaagcttaaaagactaaagattagggacggaaggagtagcaattatgcaca 13307590  T
Q  253 tggaactaacataagtgaacaagcacaacaaaacca------------gctaagaaaaatagaagatagaagacggatagaacactcacaaacttcaaat 340  Q
    ||||| ||||||||||||| ||||||||||||||||            |  ||||||||||||||||||||||||||||||||||||||||||||  ||     
T  13307591 tggaattaacataagtgaaaaagcacaacaaaaccatgatttgaagaagaaaagaaaaatagaagatagaagacggatagaacactcacaaactttgaaa 13307690  T
Q  341 gaaacaaacaaatataagggaaagcaaaggaccaaatttcccgacatgcaataagcccaggtctgtattttcctattcaattgttgttaatacctggaat 440  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||||||||||    
T  13307691 gaaacaaacaaatataagggaaagcaaaggaccaaatttccccacatgcaataagcccaggaatgtgtttttctattgaattgttgttaatacctggaat 13307790  T
Q  441 aaaatttggaaaatgtaactccaaacgggtgcaatttgattcttctgtatgtttgtggcatcctggtgtaagagaggtacatttggaccttgctctgcat 540  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13307791 aaaatttgaaaaatgtaactccaaacaggtgcaatttgattcttctgtatgtttgtggcatcctggtgtaagagaggtacatttggaccttgctctgcat 13307890  T
Q  541 ctattctagcaatattatcatttaacgtagtggatgttgattttctatacatgtaacacccatacactgatagcacagatgcacactacaaaaagaaagt 640  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13307891 ctattctagcaatattatcatttaaggtggtggatgtggattttctatacatgtaacacccatacactgatagcacagatgcacactacaacaagaaagt 13307990  T
Q  641 tcgaatcgtgagacataaat 660  Q
    || ||| |||||||||||||    
T  13307991 tcaaattgtgagacataaat 13308010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 732 - 1053
Target Start/End: Original strand, 13308016 - 13308336
Alignment:
Q  732 aacatcacaaagtcgcaaaagaagatatatcaataggattggttcgataaaaggcaatgctttccaaggagaatcaagagccataccccaaaataaattg 831  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||||||  ||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  13308016 aacatcacaaagtcacaaaagaagatatatgaatagcattggttcgatccaaggcaagg-tttccaaggagaattaagagccataccccaaaataaattg 13308114  T
Q  832 taaccagagtgaaggtccacctagaagaaatccaaaataagaggagttcacaatcaaaatttatcaatcaaatggcnnnnnnnttgaaaccaaaagtttg 931  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  13308115 taaccagagtgaaggtccacctagaagaaatccaaaataaga-gagttcacaatcaaaatttatcaatcaaatggcaaaaaaattgaaaccaaaagtttg 13308213  T
Q  932 aaaacaaatgtcagagaaatggaagtcattgaaacgaaactgagaaaacactaagaaagcttaaaaattctaattagattttggattc-attat-atgct 1029  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||| ||||| |||||    
T  13308214 -aaacaaatgtcagagaaatggaagtcattgaaacgaaactgagaaaa-actaagacagcttaaaaattctaaataga-tttggattcaattataatgct 13308310  T
Q  1030 t-aaggagaagaa-ttatttttgttg 1053  Q
    | ||||||||||| ||||||||||||    
T  13308311 taaaggagaagaatttatttttgttg 13308336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 21172128 - 21172051
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21172128 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 21172051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 10693192 - 10693115
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10693192 caagtcctggaaacagcctcttgtgtaaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 10693115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 32758275 - 32758352
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32758275 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccgg 32758352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 42391219 - 42391142
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42391219 caagtcctggaaacagcttcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 42391142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 2541140 - 2541061
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2541140 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaaatggtgggaccccttcccgg 2541061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 2663054 - 2662985
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 75  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2663054 caagtcctggaaacagcctcttgtgtaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccc 2662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 34626328 - 34626250
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||   |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34626328 caagtcctggaaacagcctcctgtgtaaaaacagggtaaggctgcgttcaatacaccaaatggtgggatcccttcccgg 34626250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 27629648 - 27629728
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggg 84  Q
    |||||||||||||||||||| |||    |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  27629648 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaatggtgggaccccttcccggg 27629728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 42476887 - 42476961
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42476887 caagttctggaaacagtctcttgtgtaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 42476961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 48735219 - 48735164
Alignment:
Q  28 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48735219 gtgtaaaacacggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 48735164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 11741809 - 11741886
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||| ||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  11741809 caagtcctgaaaacagcttctagtgtaaaatagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgg 11741886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 31591228 - 31591151
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  31591228 caagtcctggaaacaacctcttgtgtaaaacagagtaaggctgcgtacaatacaataaatggtgggaccccttcccgg 31591151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 33872030 - 33871954
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||| |||| |||   |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33872030 caagtcctggaaacaacctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccccttccc 33871954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 35334935 - 35334858
Alignment:
Q  8 caagtcctggaaacagcctcgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| |||||||||||  ||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  35334935 caagtcctggaaacagtctcgtgtaaaaaacagggtaagactgtgtacaatacaccgaatggtgggaccccttcccgg 35334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 47716473 - 47716554
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  47716473 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 47716554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 7879680 - 7879731
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7879680 aaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 7879731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 11617709 - 11617633
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||| |||| |||    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11617709 caagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 11617633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 19265856 - 19265907
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19265856 aaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 19265907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 23419795 - 23419719
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||| |||||||||||||| |||    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23419795 caagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 23419719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 38604546 - 38604619
Alignment:
Q  13 cctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  38604546 cctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagacccctttccgg 38604619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 42805538 - 42805619
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  42805538 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccgg 42805619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 46354208 - 46354289
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  46354208 caagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 46354289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 13805116 - 13805191
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacaggg-taaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||| ||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  13805116 caagtcctggaaatagcctctggtgtaaaacaggggtaaggctgtgtacaatacaccaaatggtgggaccacttcc 13805191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 18512573 - 18512495
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| | || |||   |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  18512573 caagtcctggaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacaccgaatggtgggaccccttcccgg 18512495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 19266492 - 19266543
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  19266492 aaaacagggtaaggctgcgtacaatacaccaaattgtgggatcccttcccgg 19266543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 28078252 - 28078175
Alignment:
Q  8 caagtcctggaaacagcctcgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||| ||||||| |||||||||||   |||||||||| ||| | ||||||||||||||||||||||||||||||    
T  28078252 caagtcctagaaacagtctcgtgtaaaaaaacagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccg 28078175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 42798711 - 42798762
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  42798711 aaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccctttcccgg 42798762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 1408471 - 1408550
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||| |||||| |||    |||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  1408471 caagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagcaaatggtgggaccccttcccgg 1408550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 14099099 - 14099049
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  14099099 aaaacaggttaagactgcgtacaatacaccaaatggtgggaccccttcccg 14099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 14409116 - 14409066
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  14409116 aaaacaggttaagactgcgtacaatacaccaaatggtgggaccccttcccg 14409066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 19427010 - 19426939
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 75  Q
    |||||||||||||||||||| |||    |||| |||||||| ||||||||||||||||||||||||||||||    
T  19427010 caagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaatacaccaaatggtgggaccc 19426939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 28362231 - 28362189
Alignment:
Q  39 ggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28362231 ggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 28362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 8149038 - 8148989
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  8149038 aaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttccc 8148989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 27889399 - 27889358
Alignment:
Q  42 aaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27889399 aaggctgcgtacaatacaccaaatggtgggaccccttcccgg 27889358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 43557486 - 43557567
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||| |||||||||||||||||||||||  |||||||||||||| ||||||    
T  43557486 caagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccccctcccgg 43557567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 47077974 - 47077899
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||| |||  |||||||| || |||| | |||||||||||||| ||||||||||||||||||||    
T  47077974 caagtcctggaaacagtctcttgtgtaaaatagagtaaagttgcgtacaatacacaaaatggtgggaccccttccc 47077899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 48123605 - 48123531
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaa--acagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    ||||||||||||||||||||  |||||||  |||||||||  |||| ||||||||||||||||||||||||||||    
T  48123605 caagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaatggtgggacccctt 48123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 35787362 - 35787311
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  35787362 aaaacatggtaaggttgcgtacaatacaccaaatggcgggaccccttcccgg 35787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 40463918 - 40463965
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  40463918 aaaactgggtaaggctgcgtataatacaccaaatggtgggaccccttc 40463965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 18747533 - 18747577
Alignment:
Q  36 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||    
T  18747533 cagggtaaggctgcgtataatacaccaattggtgggaccccttcc 18747577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 32233255 - 32233179
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||| |||| |||   ||||||||||||||| ||||| | |||||||||||||||||  |||||||    
T  32233255 caagtcctggaaacaacctcttgtgtaaaaacagggtaaggcagcgtatattacaccaaatggtgggattccttccc 32233179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 7644970 - 7645047
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcc 80  Q
    |||||||||||||||||||| |||    |||||||||||||   |||||||||||||| |||| ||||||||||||||    
T  7644970 caagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacaccaaaattgtgggaccccttcc 7645047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 16341320 - 16341372
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| ||||||||||||| |||||||||| || ||||||||    
T  16341320 aaaacagggtaaggctacgtacaatacaccaaaatggtgggccctcttcccgg 16341372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 17048909 - 17048857
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  17048909 aaaacagggtaaggttacgtacaatacaccaaaatggtggaaccccttcccgg 17048857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 23231606 - 23231649
Alignment:
Q  39 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||| |||||||| |||| |||||||||||||||    
T  23231606 ggtaaggctgcgtataatacaccgaatgatgggaccccttcccg 23231649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 29907433 - 29907513
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||| ||||||||||| |||    |||| || |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  29907433 caagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtgggaccccatcccgg 29907513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 32758365 - 32758396
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  32758365 cgggagctctagtgcaccgggttgcccttttt 32758396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 21139841 - 21139791
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||| |||||| ||  |||| |||||||||||||||||||||||||||    
T  21139841 aaaacagagtaaggttggatacagtacaccaaatggtgggaccccttcccg 21139791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 22699063 - 22699018
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccc 75  Q
    ||||||||||||| ||||||||||||||||  ||||||||||||||    
T  22699063 aaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccc 22699018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 23619088 - 23619023
Alignment:
Q  15 tggaaacagcctc-gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||||||| |||| || |||||||| |||||  || |||||||||| |||||||||||||||||||    
T  23619088 tggaaacaacctctgtataaaacagagtaagcttgtgtacaatacatcaaatggtgggaccccttc 23619023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 33500556 - 33500608
Alignment:
Q  33 aaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccgg 83  Q
    |||||||||||| |||||||| |||||| |||  |||||||||||||||||||    
T  33500556 aaacagggtaagactgcgtactatacacaaaaaatggtgggaccccttcccgg 33500608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 38262317 - 38262239
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||||| ||| |||    |||| | ||||| | ||| |||||||||||||||| |||||||||||||||    
T  38262317 caagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaatgatgggaccccttcccg 38262239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 2e-30; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 22371071 - 22371147
Alignment:
Q  8 caagtcctggaaacagcctcgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22371071 caagtcctggaaacagcctcgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 22371147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 9671199 - 9671272
Alignment:
Q  12 tcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9671199 tcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 9671272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 21779380 - 21779303
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21779380 caagtcctggagacagcctcttgtgtaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgg 21779303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 36871509 - 36871585
Alignment:
Q  10 agtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 36871585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 8455437 - 8455358
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaaca--gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8455437 caagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 8455358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 12024039 - 12023961
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12024039 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccctcccgg 12023961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 23397780 - 23397853
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23397780 caagtcctggaaacagcctcttgtgtaaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttc 23397853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 10546176 - 10546256
Alignment:
Q  8 caagtcctggaaacagcctcgtgta-----aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10546176 caagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 10546256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14444743 - 14444821
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||   ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  14444743 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgtgtacgatacaccaaatggtgggaccccttcccgg 14444821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 25249858 - 25249781
Alignment:
Q  8 caagtcctggaaacagcctc--gtgta-aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||| ||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25249858 caagtcatggaaacagtctcttgtgtacaaacagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccg 25249781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 10543712 - 10543793
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    |||||||||||||| ||||| |||    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10543712 caagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccgg 10543793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14530332 - 14530413
Alignment:
Q  8 caagtcctggaaacagcctcgtgta----aaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| ||||    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  14530332 caagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccgg 14530413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 24200746 - 24200665
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  24200746 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccgg 24200665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 32781381 - 32781332
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32781381 aaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttccc 32781332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 17623578 - 17623656
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||| |||||| ||||  ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  17623578 caagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccg 17623656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 99384 - 99311
Alignment:
Q  8 caagtcctggaaacagcctcgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||||||| ||||||||||| |||||||  || || ||||||||||||||||||||||||||||| ||||||||    
T  99384 caagtcctagaaacagcctcttgtaaaaaacatggcaaggctgcgtacaatacaccaaatggtggaaccccttc 99311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 21377166 - 21377116
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21377166 aaaacagggtaaggctgggtacaatgcaccaaatggtgggaccccttcccg 21377116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 17668016 - 17668091
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||||| | ||||  ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  17668016 caagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttc 17668091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 5450328 - 5450376
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  5450328 aaaacatggtaaggctgcgtacaatacaccaaagggtgggaccccttcc 5450376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 4516444 - 4516393
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  4516444 aaaacagggcaacgctgcgtacaatacaccaattggtgggaccccttcccgg 4516393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17896302 - 17896349
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  17896302 aaaatagggtaaggctgcgtacaatataccaaatggtgggaccccttc 17896349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 23145791 - 23145740
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  23145791 aaaacagtgtaaggctgcgtacaatacaccaattggtgggaccctttcccgg 23145740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 23557581 - 23557530
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  23557581 aaaacagtgtaaggctgcgtacaatacaccaattggtgggaccctttcccgg 23557530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 24890453 - 24890504
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||||||||    
T  24890453 aaaacaaggtaaggctgcatacaatacaccaattggtgggaccccttcccgg 24890504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 25079810 - 25079759
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  25079810 aaaacaaggtaaggatgcgtacaatacaccgaatggtgggaccccttcccgg 25079759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 25641516 - 25641593
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||| |  |||   |||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  25641516 caagtcctggaaacagcattttgtgtgaaaacagggtaaagttgcgtacaatacaccaaattgtgggaccccttcccg 25641593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 11514454 - 11514521
Alignment:
Q  12 tcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 75  Q
    |||||||||||||||| |||    ||||||  ||||||||||||||||||||||||||||||||||||    
T  11514454 tcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaaatggtgggaccc 11514521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 25632551 - 25632601
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  25632551 aaaacaggataaggctgcgtacaatacaccaaatggtgggattccttcccg 25632601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 40762349 - 40762279
Alignment:
Q  14 ctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||| |||    ||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  40762349 ctggaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaatggtgggaccctttcc 40762279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 44643565 - 44643614
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  44643565 aaaacagagtaaggctgcgtacaatgtaccaaatggtgggaccccttccc 44643614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 13245181 - 13245137
Alignment:
Q  39 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  13245181 ggtaaggctgcgtacattacactaaatggtgggaccccttcccgg 13245137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 39914398 - 39914350
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||    
T  39914398 aaaacagggtaaggatgtgtacaatacaccgaatggtgggaccccttcc 39914350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 44449477 - 44449425
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  44449477 aaaacaggataaggctgcgtacaatacaccaaaatagtgggaccccttcccgg 44449425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 30826052 - 30826121
Alignment:
Q  9 aagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 75  Q
    ||||| ||||||||||||| |||   |||| ||||||||| |||||||||||||||||||||||| ||||    
T  30826052 aagtcttggaaacagcctcttgtgtaaaaatagggtaaggttgcgtacaatacaccaaatggtggaaccc 30826121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 19977807 - 19977757
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||| ||| ||||| |||||||||||||||||||||||||| |||||||||    
T  19977807 aaaataggataaggttgcgtacaatacaccaaatggtgggatcccttcccg 19977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 27573635 - 27573700
Alignment:
Q  8 caagtcctggaaacagcctc--gtgta-aaacagggtaaggctgcgtacaatacaccaaatggtgg 70  Q
    ||||||| || |||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  27573635 caagtccgggcaacagcctcttgtgtataaacatggtaaggctgcgtacaatacaccaaatggtgg 27573700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 26684706 - 26684663
Alignment:
Q  39 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||| || ||||||||||||| |||||||    
T  26684706 ggtaaggctgcgtacaatatactaaatggtgggacctcttcccg 26684663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 5841070 - 5841123
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccgg 83  Q
    |||| ||||||||| ||||||||||||| |||  ||||||||||||||||||||    
T  5841070 aaaatagggtaaggatgcgtacaatacatcaataatggtgggaccccttcccgg 5841123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31821436 - 31821390
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    |||| ||||||||| || ||||||||||||||||| |||||||||||    
T  31821436 aaaatagggtaaggttgtgtacaatacaccaaatgatgggacccctt 31821390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 33795327 - 33795376
Alignment:
Q  32 aaaacagggtaaggctgcgtac-aatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  33795327 aaaacagggtaaggctgcgtacaaatacacc-tatggtgggaccccttccc 33795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 39499323 - 39499277
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    |||| ||||||| ||||||||||||||| |||||||||||| |||||    
T  39499323 aaaatagggtaaagctgcgtacaatacatcaaatggtgggatccctt 39499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 2003629 - 2003592
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtg 69  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  2003629 aaaacagggtaaggatgcgtacaatacaacaaatggtg 2003592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 23397870 - 23397899
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttt 110  Q
    ||||||||||||||||||||||||||||||    
T  23397870 cgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 44521466 - 44521417
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||| ||||||||||| || |||||||||||||| |||| ||||||||    
T  44521466 aaaacaaggtaaggctgcatataatacaccaaatggcgggagcccttccc 44521417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 3e-29; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 12670369 - 12670292
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12670369 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 12670292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 30454216 - 30454139
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  30454216 caagtcctggaaacagcctcttgtgtaaaacaaggtaaggctgcgtacgatacaccaaatggtgggaccccttcccgg 30454139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 36720810 - 36720889
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36720810 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 36720889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 13160716 - 13160794
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||| ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13160716 caagtcctagaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 13160794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 45071279 - 45071357
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||| |||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45071279 caagttctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 45071357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 28817747 - 28817668
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28817747 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacccaatggtgggaccccttcccgg 28817668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 29877136 - 29877187
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29877136 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 29877187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 5135410 - 5135331
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5135410 caagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccgg 5135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 19729379 - 19729433
Alignment:
Q  29 tgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19729379 tgtaaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccgg 19729433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 23000338 - 23000228
Alignment:
Q  9 aagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc------cgggagctctagtgcaccg 99  Q
    ||||||||||||||||||| |||   |||||| ||||||| | | ||||||||||||||||||||||||||||||      |||||||| ||||||||||    
T  23000338 aagtcctggaaacagcctcttgtgtaaaaacacggtaaggttccatacaatacaccaaatggtgggaccccttcccggatgcgggagctttagtgcaccg 23000239  T
Q  100 ggttgcccttt 110  Q
    |||||||||||    
T  23000238 ggttgcccttt 23000228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 29521806 - 29521729
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29521806 caagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaacccatccc 29521729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 44530191 - 44530239
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44530191 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 44530239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 20869617 - 20869542
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||    
T  20869617 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgtgtacaatacaccaa--ggtgagaccccttcccgg 20869542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 23286422 - 23286337
Alignment:
Q  28 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacc---ccttcccgggagctctagtgcaccgggttgcccttt 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||   | |   ||||||||||||||||||||| ||||||||    
T  23286422 gtgtaaaacagggtaaagctgcgtacaatacaccaaatggtgggaccctgcatatgcgggagctctagtgcaccgggctgcccttt 23286337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 26954146 - 26954226
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||     |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  26954146 caagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccc 26954226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 7136650 - 7136569
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  ||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  7136650 caagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 7136569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 35261721 - 35261769
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35261721 aaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcc 35261769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 8897857 - 8897806
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  8897857 aaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttcccgg 8897806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 24365148 - 24365101
Alignment:
Q  36 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24365148 cagggtaaggctgcgaacaatacaccaaatggtgggaccccttcccgg 24365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 2626533 - 2626613
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-------aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||       ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  2626533 caagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaatgatgggaccccttccc 2626613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 5689677 - 5689723
Alignment:
Q  36 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  5689677 cagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccg 5689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 6760836 - 6760913
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttc 79  Q
    |||||||||||||||||||| |||    |||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  6760836 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccccttc 6760913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 20284194 - 20284111
Alignment:
Q  8 caagtcctggaaacagcctcgtgta------aaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| ||||      ||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  20284194 caagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 20284111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 39461117 - 39461036
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||| |||||||||||||||||||||||  ||||||| |||||||||||||    
T  39461117 caagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccgg 39461036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 8484059 - 8483982
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||| |||| |||    ||||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  8484059 caagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaattggtgggaccccatccc 8483982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 12625903 - 12625983
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| |||     ||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  12625903 caagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaatggtgggaccccctcccgg 12625983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 17823590 - 17823668
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||||  ||||||||  |||| |||| ||||||| ||||||||||||||||| |||||||||||    
T  17823590 caagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaaatggtggaaccccttcccg 17823668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 43942366 - 43942417
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttccc 81  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  43942366 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 44742612 - 44742564
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttc 79  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44742612 aaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttc 44742564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 20869965 - 20870015
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcc 80  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20869965 aaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcc 20870015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 21070823 - 21070739
Alignment:
Q  8 caagtcctggaaacagcctcgtgta-------aaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| ||||       ||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21070823 caagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 21070739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 18164880 - 18164821
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaa 64  Q
    |||||||||||||||||||| |||   |||||||||||||| ||||||||||||||||||    
T  18164880 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaa 18164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 10857871 - 10857919
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||    
T  10857871 aaaacagggtaaggctgcgcacaatacaccaattggtgggaccacttcc 10857919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 25250536 - 25250616
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccg 82  Q
    |||||||||||||||||||  |||    |||| |||||| |||||||||||||||||||  ||||||||||||||||||||    
T  25250536 caagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgggaccccttcccg 25250616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 26457776 - 26457816
Alignment:
Q  37 agggtaaggctgcgtacaatacaccaaatggtgggacccct 77  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  26457776 agggtaaggctgcgtacaatacaccaattggtgggacccct 26457816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 389687 - 389733
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||    
T  389687 aaaacagggtaaggttgcgtacaatacaccaaatgatgggatccctt 389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 11001042 - 11000992
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||| | |||||||| |||||||||||||||||||||||||||| ||||    
T  11001042 aaaacaagataaggctgtgtacaatacaccaaatggtgggacccctacccg 11000992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 16225061 - 16225114
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  16225061 aaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccgg 16225114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 17250998 - 17250918
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccg 82  Q
    |||||||||||| ||||||| |||    |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  17250998 caagtcctggaagcagcctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccg 17250918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 26102578 - 26102610
Alignment:
Q  51 tacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||||||    
T  26102578 tacaatacaccaaatggtgggaccccttcccgg 26102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 35105937 - 35106040
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggt--aaggctgcgtacaatacacca-aatggtgggaccccttcccgggagctctagtgcaccgggt 102  Q
    ||||||||||||||| ||||  |||||||| || ||  ||||||||||||||||||||| |||||||||||| ||||| ||   | |||||||||||||     
T  35105937 caagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacaccagaatggtgggacctcttcctgg--accctagtgcaccgggc 35106034  T
Q  103 tgccct 108  Q
    ||||||    
T  35106035 tgccct 35106040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 22598199 - 22598250
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||  |||||||||||||| ||||| ||||| |||||||    
T  22598199 aaaacagggtaaggctatgtacaatacaccaattggtgagaccctttcccgg 22598250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 26102623 - 26102654
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  26102623 cgggagctctagtgcaccgggttgcccttttt 26102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 31457224 - 31457263
Alignment:
Q  42 aaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  31457224 aaggctgcgtacaatacatcaaatggtaggaccccttccc 31457263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 44781627 - 44781567
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaa 64  Q
    ||||||||||||||| ||||  ||||||||  ||||||||||||| |||||||||||||||    
T  44781627 caagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaa 44781567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 10857935 - 10857968
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttat 114  Q
    |||||||| |||||||||||||||||||||||||    
T  10857935 cgggagctttagtgcaccgggttgccctttttat 10857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 27037654 - 27037695
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttattaattttt 122  Q
    |||||| |||||||||||||| |||||||||| |||||||||    
T  27037654 cgggagttctagtgcaccgggctgcccttttttttaattttt 27037695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 36918166 - 36918199
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaat 65  Q
    ||||||||||||||||| ||||||||||||||||    
T  36918166 aaaacagggtaaggctgtgtacaatacaccaaat 36918199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 42083820 - 42083741
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaaca--gggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccg 82  Q
    |||||||||||||||||||   |||||||| |  ||| ||||||||||||| || |||||| ||||||||||||||||||    
T  42083820 caagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtacagtataccaaaatggtgggaccccttcccg 42083741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 3e-29; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 1354876 - 1354799
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1354876 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 1354799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 1346978 - 1347055
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1346978 caagtcctggaaacagccacttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 1347055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 26097178 - 26097251
Alignment:
Q  12 tcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  26097178 tcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccgg 26097251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 28007642 - 28007717
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  28007642 caagtcctggaaagagcctcttgtgtaaaacagggtcaggctgcgtacaatacaccaaatgctgggaccccttccc 28007717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 25557743 - 25557816
Alignment:
Q  12 tcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  25557743 tcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccgg 25557816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 29355978 - 29355897
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaa--aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29355978 caagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 29355897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 23240943 - 23240870
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||||||||||||  |||||||||||||||||  ||||||||||| ||||| |||||||||||||||    
T  23240943 caagtcctggaaacagcctcttgtgtaaaacagggtaagtttgcgtacaatataccaattggtgggaccccttc 23240870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 12222038 - 12221957
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  12222038 caagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 12221957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 1941897 - 1941941
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccc 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  1941897 aaaacagggtaaggctgcgtacaatacaccgaatggtgggacccc 1941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 9161137 - 9161213
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttc 79  Q
    |||||||||||||||||||| |||   ||||||| |||||||||||||||||||| ||  |||||||||||||||||    
T  9161137 caagtcctggaaacagcctcttgtgtaaaaacagagtaaggctgcgtacaatacatcaataatggtgggaccccttc 9161213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 7947489 - 7947413
Alignment:
Q  12 tcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    ||||||||||| ||||  ||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  7947489 tcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtacaatacaccaaaatggtgggcccccttcccgg 7947413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 32579440 - 32579516
Alignment:
Q  8 caagtcctggaaacagcctcgtgta---aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||||||||  |||   ||| | |||||| ||||||||||||| ||||||||||||||||||||||    
T  32579440 caagtcctggaaacagcctctggtataaaaatacggtaagcctgcgtacaataccccaaatggtgggaccccttccc 32579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 33138847 - 33138918
Alignment:
Q  8 caagtcctggaaacagcctcgtgta----aaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 75  Q
    ||||||||||||||| |||| ||||    |||||| ||||||| ||||||||||||||||||||||||||||    
T  33138847 caagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaatggtgggaccc 33138918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 2166533 - 2166452
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  ||||||||  |||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  2166533 caagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccgg 2166452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 2178166 - 2178085
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  ||||||||  |||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  2178166 caagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccgg 2178085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 15866130 - 15866081
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  15866130 aaaacagggtaaagctgcgta--atacaccaaatggtgggaccccttcccgg 15866081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 25557829 - 25557863
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttatt 115  Q
    |||||||||||||||||||||||||||||||||||    
T  25557829 cgggagctctagtgcaccgggttgccctttttatt 25557863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 25997755 - 25997789
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttatt 115  Q
    |||||||||||||||||||||||||||||||||||    
T  25997755 cgggagctctagtgcaccgggttgccctttttatt 25997789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 26097264 - 26097298
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttatt 115  Q
    |||||||||||||||||||||||||||||||||||    
T  26097264 cgggagctctagtgcaccgggttgccctttttatt 26097298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 15865948 - 15865902
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  15865948 aaaacagggtaaagctgcgta--atacaccaaatggtgggaccccttcc 15865902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 3815156 - 3815120
Alignment:
Q  46 ctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3815156 ctgcgtacaatacaccaaatggtgggaccctttcccg 3815120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 1347068 - 1347099
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  1347068 cgggagctctagtgcaccgggttgcccttttt 1347099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 18277307 - 18277238
Alignment:
Q  15 tggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||  ||||||||  |||||||||| || |||||  ||||||||||||||||||||||||    
T  18277307 tggaaacagcctcttgtgtaaaaatcagggtaaggttgagtacagaacaccaaatggtgggaccccttcc 18277238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 13905072 - 13905034
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgg 70  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  13905072 aaaacagggtaaggctgcatacaattcaccaaatggtgg 13905034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 24097623 - 24097670
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||| |||||    ||||||||||||||||||||||||    
T  24097623 aaaacagggtaaggctgcttacaa----ccaaatggtgggaccccttcccgg 24097670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 24734684 - 24734737
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    |||||||||||||| ||||||||||||| |  ||| ||||||||||||||||||    
T  24734684 aaaacagggtaaggttgcgtacaatacaacaaaaaaggtgggaccccttcccgg 24734737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 8409257 - 8409311
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatac 58  Q
    |||||||||||||| ||||| |||    |||||||||||||||||||||||||||    
T  8409257 caagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 14341163 - 14341134
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc 61  Q
    ||||||||||||||||||||||||||||||    
T  14341163 aaaacagggtaaggctgcgtacaatacacc 14341134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 32703438 - 32703515
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32703438 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 32703515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 8170103 - 8170026
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8170103 caagtcctggaaacagccttttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 8170026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 7368413 - 7368489
Alignment:
Q  9 aagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaattggtgggaccccttcccgg 7368489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 35710327 - 35710404
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  35710327 caagtcctggaaacagcctcttgtgtaaaatagggtaaggctgcgttcaatacaccaaatggtgggaccccttcccgg 35710404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 41014333 - 41014408
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41014333 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 41014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 19143063 - 19142985
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| |||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19143063 caagtcctggaaacaacctcttgtgtaaaaacagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccgg 19142985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 24448904 - 24448983
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||  |||    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24448904 caagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 24448983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 38879595 - 38879676
Alignment:
Q  8 caagtcctggaaacagcctcgtgta----aaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38879595 caagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 38879676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 34154908 - 34154856
Alignment:
Q  31 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34154908 taaatcagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 34154856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 43334216 - 43334298
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||     ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  43334216 caagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccgg 43334298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 43574648 - 43574699
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43574648 aaaacagggtaaggctgcgtacaatataccaaatggtgggaccccttcccgg 43574699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 4619227 - 4619146
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||| |||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4619227 caagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 4619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 13801890 - 13801809
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||| ||||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13801890 caagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 13801809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 27328766 - 27328846
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccg 82  Q
    |||||||||||||||| ||| |||    |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27328766 caagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccg 27328846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 2838820 - 2838867
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2838820 aaaacagggtaaggctgcgtacaatacaccaaatggtgggatcccttc 2838867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 16880740 - 16880689
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  16880740 aaaacagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccgg 16880689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 7097853 - 7097803
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  7097853 aaaacagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccg 7097803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 41425990 - 41426039
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  41425990 aaaacagggtaaggctgcatacaatacaccaattggtgggaccccttccc 41426039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 20135623 - 20135699
Alignment:
Q  13 cctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 20135699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 22600499 - 22600547
Alignment:
Q  35 acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22600499 acagggtaaggctgtgtacaatacaccaaatggtgggatcccttcccgg 22600547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 3771381 - 3771432
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  3771381 aaaacagggtaaggctgtgaacaatacaccaattggtgggaccccttcccgg 3771432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 30006369 - 30006419
Alignment:
Q  34 aacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggg 84  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  30006369 aacagggtaaggctgtgtacattacactaaatggtgggaccccttcccggg 30006419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 37024675 - 37024626
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaa 55  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  37024675 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 29334415 - 29334489
Alignment:
Q  14 ctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca-aatggtgggaccccttcccgg 83  Q
    |||||||||||||| |||    |||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccgg 29334489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 12477205 - 12477162
Alignment:
Q  41 taaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  12477205 taaggctgcgtacaatacaccaaaatggtgggaccccttcccgg 12477162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 209048 - 208972
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcc 80  Q
    |||||||||| |||| |||| |||   |||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  209048 caagtcctggcaacaacctcttgtgtaaaaacagggtaaggctgcattcaatacaccaaaatggtgggaccccttcc 208972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 1565483 - 1565525
Alignment:
Q  41 taaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  1565483 taaggctgcgtacaatgcaccaaatggcgggaccccttcccgg 1565525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 22907985 - 22907913
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccct 77  Q
    |||||||  ||||||||||| |||   ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  22907985 caagtccaagaaacagcctcttgtgtaaaaacagagtaaggttgcatacaatacaccaaatggtgggacccct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 16957374 - 16957407
Alignment:
Q  50 gtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||    
T  16957374 gtacaatacaccaaatggtgggaccccttcccgg 16957407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 9794471 - 9794424
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||||| |||| ||||||||||||||| |||||| ||||||    
T  9794471 aaaacagggtaagactgcatacaatacaccaaatagtgggatcccttc 9794424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 11657785 - 11657742
Alignment:
Q  40 gtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccg 82  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  11657785 gtaaggctgcatacaatacaccaaaatggtgggaccccttcccg 11657742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Complemental strand, 16028653 - 16028622
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  16028653 cgggagctctagtgcaccgggttgcccttttt 16028622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 35710417 - 35710448
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  35710417 cgggagctctagtgcaccgggttgcccttttt 35710448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 32703528 - 32703558
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttt 111  Q
    |||||||||||||||||||||||||||||||    
T  32703528 cgggagctctagtgcaccgggttgccctttt 32703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 1405244 - 1405277
Alignment:
Q  47 tgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||||||||||||||||| ||||    
T  1405244 tgcgtacaatacaccaaatggtgggaccctttcc 1405277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 39301164 - 39301217
Alignment:
Q  31 taaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||||    
T  39301164 taaaacagggtaaggatgcgtataatgcaccaaaaaggtgggaccccttcccgg 39301217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 43334310 - 43334343
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttat 114  Q
    |||||||| |||||||||||||||||||||||||    
T  43334310 cgggagctttagtgcaccgggttgccctttttat 43334343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 3e-29; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 47528649 - 47528572
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47528649 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 47528572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 48598944 - 48598867
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48598944 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 48598867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 9832432 - 9832355
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9832432 caagtcctgaaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 9832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 20224998 - 20225075
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20224998 caagtcctggaaacaacctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 20225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 5648273 - 5648351
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5648273 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 5648351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 29208017 - 29207940
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29208017 caagtcctggaaattgcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 29207940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 5306784 - 5306706
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5306784 caagtcctggaaacagcctcttgtgtaaaatcagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgg 5306706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 17043515 - 17043438
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  17043515 caagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 17043438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 47443971 - 47444050
Alignment:
Q  8 caagtcctggaaacagcct----cgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||    |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47443971 caagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 47444050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 6430746 - 6430668
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6430746 caagtcatggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccacttcccgg 6430668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 8473741 - 8473666
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||||||||  ||||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  8473741 caagtcctggaaacagcctcttgtgtttaacagggtaaggctgcatacaatacaccaaatggtgggaccccttccc 8473666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 30639394 - 30639472
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| ||| |||   |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30639394 caagtcctggaaacagactcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagaccccttcccgg 30639472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 40915843 - 40915921
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||   |||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  40915843 caagtcctggaaacagcctcttgtgtaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggagcccttcccgg 40915921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 49796818 - 49796889
Alignment:
Q  14 ctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||| |||   |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49796818 ctggaaacagcctcttgtgttaaaacatggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 49796889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 20639777 - 20639700
Alignment:
Q  11 gtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||| |||    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgg 20639700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 7909397 - 7909324
Alignment:
Q  12 tcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||| ||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccg 7909324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 11054267 - 11054190
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||| |||||| |||  ||||||||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  11054267 caagtcctgaaaacagtctcttgtgtaaaacagggtaagactgcgtacaatacaccaaatggcggaaccccttcccgg 11054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 39077915 - 39077852
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtg 69  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||    
T  39077915 caagtcctggaaacagcctcttgtgtaaaacagggtaaggttgcgtacaatataccaaatggtg 39077852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 54175077 - 54175155
Alignment:
Q  8 caagtcctggaaa-cagcctcgtgt---aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 81  Q
    ||||||||||||| ||||||| |||   |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54175077 caagtcctggaaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccc 54175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 25629091 - 25629142
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  25629091 aaaatagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccgg 25629142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 30690269 - 30690218
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  30690269 aaaacagggtaaggctgcatacaatacaccaattggtgggaccccttcccgg 30690218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 51865131 - 51865080
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  51865131 aaaacatggtaaggctgcgtacaatacaccaaatggtggggccccttcccgg 51865080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 9987955 - 9987879
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaa--acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||| ||||  |||||||  | ||||||||||||| ||||||||||||||||||||||||||||||    
T  9987955 caagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaatggtgggaccccttcc 9987879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 19027890 - 19027936
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  19027890 aaaacagggtaaggctgcgtacaatacaccaattggtgggacccctt 19027936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 35567212 - 35567262
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  35567212 aaaacagggtaaggctgtgtacaacacaccaaatggtgggaccccttcccg 35567262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 16408724 - 16408643
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||||||||| |||||||||||||||||  |||||||| ||||||||||||    
T  16408724 caagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccgg 16408643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 16911576 - 16911657
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||| ||||||||||| |||    ||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16911576 caagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 16911657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 41018914 - 41018838
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaac-agggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||| ||||  ||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||    
T  41018914 caagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaatacaccaaatagtgggaccccttccc 41018838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 20225119 - 20225169
Alignment:
Q  35 acagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 20225169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 21646978 - 21647057
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||    |||| ||||||||||||||||||||| ||||  |||||||||||||||||||    
T  21646978 caagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggaccccttccc 21647057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 47441619 - 47441572
Alignment:
Q  36 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  47441619 cagggtaaggctgtgtacaatacaccaaatggttggaccccttcccgg 47441572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 23501829 - 23501882
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  23501829 aaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccgg 23501882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 25463136 - 25463215
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| |||    ||||| ||| |||| ||||||||| |||||||||||||||||||||||||||    
T  25463136 caagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaaatggtgggaccccttcccgg 25463215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 30496441 - 30496364
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| |||||||||||||  |||||||   |||||||||||| ||||||||||||||||| ||||| |||||||||    
T  30496441 caagtcatggaaacagcctcttgtgtaaacacgggtaaggctgcatacaatacaccaaatggggggactccttcccgg 30496364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 13256494 - 13256442
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccg 82  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  13256494 aaaacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccg 13256442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 37494865 - 37494939
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    ||||||||||||||| |||| |||    |||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  37494865 caagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatataccaaatggtgggacccctt 37494939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 44363253 - 44363172
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaa--tggtgggaccccttcccgg 83  Q
    ||||||||| ||||||||||||||    ||||||||||| ||||||||||||  |||||||  |||||||||||||||||||    
T  44363253 caagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggaccccttcccgg 44363172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 10277872 - 10277801
Alignment:
Q  12 tcctggaaacagcctcgtgta--aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||| ||||||||||| ||||  ||| ||| |||||||||||||||||||||||||||||  ||||||||||    
T  10277872 tccttgaaacagcctcttgtataaaataggataaggctgcgtacaatacaccaaatggtgaaaccccttccc 10277801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 20908723 - 20908679
Alignment:
Q  39 ggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  20908723 ggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccg 20908679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 30581559 - 30581507
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  30581559 aaaacagggtaagggtgtgtacaatacaccaaaatggtgggaccccttcccgg 30581507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 12711542 - 12711495
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||    
T  12711542 aaaatagggtaagactgcgtacaatacaccaaatggcgggaccccttc 12711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 14590851 - 14590922
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 74  Q
    |||||||| ||||||||||| |||     |||||||||||||||||| ||||||||| ||||||||||||||    
T  14590851 caagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaatggtgggacc 14590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 14983876 - 14983927
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| ||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  14983876 aaaatagggtaaggttgcctacaatacactaaatggtgggaccccttcccgg 14983927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 32478906 - 32478833
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  |||||||| |||||||||||||     ||||||||||||||||||||||||||||||    
T  32478906 caagtcctggaaacaacctctagtgtaaaaacagggtaaggctg-----aatacaccaaatggtgggaccccttcccgg 32478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 7385597 - 7385518
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| ||||||||||||||| |||    |||| ||||||||| || || ||||||||||||||||||||||| |||||||    
T  7385597 caagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaatggtgggaccctttcccgg 7385518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 21489101 - 21489180
Alignment:
Q  8 caagtcctggaaacagcct----cgtgtaaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccg 82  Q
    |||||||||||||||||||    |||  ||||||| ||||| ||||||||||| |||| |||||||||||||||||||||    
T  21489101 caagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtgggaccccttcccg 21489180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 54967063 - 54967112
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  54967063 aaaacagggtaaggttgc-tacaatataccaaatggtgggaccccttcccg 54967112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 55766558 - 55766508
Alignment:
Q  33 aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||  |||||||| ||||| ||||||    
T  55766558 aaacagggtaaggctgcgtacaatacactgaatggtggaaccccatcccgg 55766508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 17079745 - 17079696
Alignment:
Q  31 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  17079745 taaaacagggtaaggctgcatacaatacgctaaatggtgggaccctttcc 17079696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 25343229 - 25343261
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaa 64  Q
    |||||||||||||||||||||||||||||||||    
T  25343229 aaaacagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 35894555 - 35894503
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 83  Q
    |||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  35894555 aaaacacggtaagtgtgcgtacaatacaccaaaatggtgggaccccttcccgg 35894503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 38786715 - 38786746
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  38786715 cgggagctctagtgcaccgggttgcccttttt 38786746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 4222113 - 4222071
Alignment:
Q  40 gtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||| ||||||| || ||||||||||||||||||    
T  4222113 gtaaggctgcgtagaatacacaaattggtgggaccccttcccg 4222071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 20405129 - 20405182
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||  |||||||||||||| |  |||||||||||||||||||||    
T  20405129 aaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccgg 20405182  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 55830813 - 55830763
Alignment:
Q  33 aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||| ||||||||||||||||  |||||||| ||||| ||||||    
T  55830813 aaacagggtaatgctgcgtacaatacactgaatggtggaaccccatcccgg 55830763  T

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Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 16494258 - 16494310
Alignment:
Q  31 taaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttccc 81  Q
    ||||||||||||| ||||| |||||||||||  |||||||||||||| |||||    
T  16494258 taaaacagggtaaagctgcatacaatacaccaaaaatggtgggaccctttccc 16494310  T

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Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 20225088 - 20225117
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttt 110  Q
    ||||||||||||||||||||||||||||||    
T  20225088 cgggagctctagtgcaccgggttgcccttt 20225117  T

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Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 83
Target Start/End: Original strand, 38786673 - 38786702
Alignment:
Q  54 aatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||    
T  38786673 aatacaccaaatggtgggaccccttcccgg 38786702  T

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Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 48327858 - 48327806
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccg 82  Q
    ||||||||||||| |||| ||||||||||||  |||||||||||| |||||||    
T  48327858 aaaacagggtaagactgcatacaatacaccaataatggtgggacctcttcccg 48327806  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 49938711 - 49938637
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||   ||||| ||||||||    ||||||||||||||| |||||||||||||||||    
T  49938711 caagtcctggaaacagcctcttgtgtaaaaacggggtaaggt---gtacaatacaccaaaatggtgggaccccttccc 49938637  T

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Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 56323006 - 56323039
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttat 114  Q
    |||||||| |||||||||||||||||||||||||    
T  56323006 cgggagctttagtgcaccgggttgccctttttat 56323039  T

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Target: scaffold0168 (Bit Score: 63; Significance: 8e-27; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 30593 - 30670
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30593 caagtcctggaaacagcctcttgtgtaaaacagggtagggctgcgtacaatacaccaaatggtgggaccccttcccgg 30670  T

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Target: scaffold0168; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 30683 - 30714
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||||    
T  30683 cgggagctctagtgcaccgggttgcccttttt 30714  T

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Target: chr3 (Bit Score: 63; Significance: 8e-27; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 1217126 - 1217203
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1217126 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccgg 1217203  T

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Target: chr3; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 22123036 - 22122959
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22123036 caagtcctggaaacagtctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 22122959  T

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Target: chr3; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 31592885 - 31592962
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31592885 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggactccttcccgg 31592962  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 39203552 - 39203629
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39203552 caagtccttgaaacagcctcttgtgtaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgg 39203629  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 16735477 - 16735555
Alignment:
Q  8 caagtcctggaaacagcctcgtgta---aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||| ||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16735477 caagtcctcgaaacagcctcttgtagaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 16735555  T

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Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 22609802 - 22609880
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22609802 caagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 22609880  T

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Target: chr3; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 15797280 - 15797335
Alignment:
Q  28 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15797280 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 15797335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26869743 - 26869821
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26869743 caagtcctggaaacagcctctggtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttgccgg 26869821  T

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Target: chr3; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 34771461 - 34771406
Alignment:
Q  28 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34771461 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 34771406  T

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Target: chr3; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 40272933 - 40272854
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| |||    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40272933 caagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 40272854  T

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Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 47624105 - 47624156
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47624105 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 47624156  T

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Target: chr3; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26573163 - 26573242
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  26573163 caagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgggaccccatcccgg 26573242  T

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Target: chr3; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 4495757 - 4495674
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc---ccttcccgggagctctagtgcaccgggttgcccttttt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||   | |   |||||||| |||||||||||||||||||||||    
T  4495757 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 4495674  T

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Target: chr3; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 29366843 - 29366762
Alignment:
Q  8 caagtcctggaaacagcctcgtgta----aaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29366843 caagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 29366762  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 46421158 - 46421077
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  46421158 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 46421077  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 12914156 - 12914079
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||    ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  12914156 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaatggtgagaccccttccc 12914079  T

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Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 13628913 - 13628832
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaa--aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13628913 caagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 13628832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 54484730 - 54484806
Alignment:
Q  12 tcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||| |||     |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  54484730 tcctggaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 54484806  T

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Target: chr3; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 34420765 - 34420685
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  34420765 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccgg 34420685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 6411942 - 6411866
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||| || |||||||||| |||   ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6411942 caagtcttgtaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccccttccc 6411866  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 7697006 - 7696945
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatgg 67  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  7697006 caagtcctggaaacagtctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatgg 7696945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 10795546 - 10795468
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcc 80  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||    
T  10795546 caagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcc 10795468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 13730725 - 13730644
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  13730725 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccgg 13730644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14986993 - 14987074
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  14986993 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccgg 14987074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 54032680 - 54032570
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc---ccttcccgggagctctagtgcaccgg 100  Q
    ||||||||||||||| |||| |||    |||||||||||||||||| ||||||||||| ||||||||||||   | |   |||||||| |||||||||||    
T  54032680 caagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccgaatggtgggaccctgcgtatgcgggagctttagtgcaccgg 54032581  T
Q  101 gttgccctttt 111  Q
    |||||||||||    
T  54032580 gttgccctttt 54032570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 353444 - 353391
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  353444 aaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 353391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 33926119 - 33926195
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacacca-aatggtgggaccccttcc 80  Q
    ||||||||||||| |||||| |||   ||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  33926119 caagtcctggaaatagcctcttgtgtaaaaacagggtaaggctgtgtacaatacaccataatggtgggaccccttcc 33926195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 45786309 - 45786256
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  45786309 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccgg 45786256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 49013568 - 49013515
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  49013568 aaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 49013515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 8247810 - 8247729
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||| ||||||||||||||||  ||||||||||| |||||||||    
T  8247810 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccgg 8247729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 8410983 - 8410913
Alignment:
Q  11 gtcctggaaacagcctcgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||| |||||||||||||  ||||||||||||||  |||||||||||| |||||||||| ||||    
T  8410983 gtcctggaaactgcctcgtgtaaaaaacagggtaaggctgctcacaatacaccaactggtgggacctcttc 8410913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 9276328 - 9276378
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  9276328 aaaacagggtaaggctgcgtacaatacaccaaatggt-ggaccctttcccgg 9276378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 52926304 - 52926261
Alignment:
Q  40 gtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  52926304 gtaaggctgcgtacaatacaccaaatggtgggacaccttcccgg 52926261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 31831241 - 31831343
Alignment:
Q  14 ctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc----ccgggagctctagtgcaccgggttgccc 107  Q
    ||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||  |  |||| |     |||| ||||||||||||||||||||||    
T  31831241 ctggaaacagcctcttgtgtaaaatagggtaaggctgcatacaatacaccaaatggtccggaccctgcatatgcgggtgctctagtgcaccgggttgccc 31831340  T
Q  108 ttt 110  Q
    |||    
T  31831341 ttt 31831343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 53996659 - 53996609
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 81  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  53996659 aaaacagggtaaggctgcttacaatacaccaaaatggtgggaccccttccc 53996609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 7943026 - 7943100
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    ||||||||||||||||| || |||    ||||||||||||| |||||||||||||| |||||||||||| |||||    
T  7943026 caagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaatggtgggatccctt 7943100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 45620950 - 45620881
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacaccaaatggtggga 72  Q
    ||||| |||||||||||||| |||     |||||||||||||||||||||||||||||||| ||||||||    
T  45620950 caagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaattggtggga 45620881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 31904950 - 31904906
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccc 76  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  31904950 aaaacagggtatgactgcgtacaatacaccaaatggtgggacccc 31904906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 54374439 - 54374387
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  54374439 aaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccgg 54374387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 9607239 - 9607318
Alignment:
Q  8 caagtcctggaaacagcct----cgtgtaaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttccc 81  Q
    |||||||||||||||||||    |||  ||||||||||||||||||||| |||||||||  |||| ||||||||||||||    
T  9607239 caagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaataatgttgggaccccttccc 9607318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 25517251 - 25517212
Alignment:
Q  44 ggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  25517251 ggctgcgtacaatacacaaaatggtgggaccccttcccgg 25517212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 45948931 - 45948884
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  45948931 aaaatagggtaaggctgcatacaatacaccaattggtgggaccccttc 45948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 1217216 - 1217250
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttatt 115  Q
    |||||||||||||||||||||||||||||||||||    
T  1217216 cgggagctctagtgcaccgggttgccctttttatt 1217250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 26292390 - 26292444
Alignment:
Q  28 gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||| | |||||| |||||||||||| ||||| |||||||||    
T  26292390 gtgtaaaacagggtaagaccgcgtacgatacaccaaatgatgggatcccttcccg 26292444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 30928268 - 30928189
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||| ||||||| || ||| |||||||||| ||| |||||||||||||||    
T  30928268 caagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaattggcgggaccccttcccgg 30928189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 516445 - 516525
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc---aaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||    ||||||||||||||||||| |||||| |||   |||||| |||||||||||||    
T  516445 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccc 516525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 33235596 - 33235641
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggacccct 77  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  33235596 aaaacagggtaagactgtgtacaatacactaaatggtgggacccct 33235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 43114991 - 43114918
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaagg-ctgcgtacaatacaccaaatggtgggaccc 75  Q
    |||||||||||||||||||| |||     |||||||||||||| || | |||||||||||||||||||||||||    
T  43114991 caagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaaatggtgggaccc 43114918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 45139568 - 45139520
Alignment:
Q  35 acagggtaaggctgcgtacaatacacc--aaatggtgggaccccttccc 81  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  45139568 acagggtaaggctgcatacaatacaccaaaaatggtgggaccccttccc 45139520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 52428567 - 52428526
Alignment:
Q  35 acagggtaaggctgcgtacaatacaccaaatggtgggacccc 76  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  52428567 acagggtaaggctgcgtacaatacaccaaatagtggaacccc 52428526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 19731038 - 19731115
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||| |||||| |||    |||||| ||||||| ||||||||||||||| | ||||||||||| |||||    
T  19731038 caagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacctattggtgggaccctttccc 19731115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 25944505 - 25944583
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaaca--gggtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 81  Q
    |||||||||||||| |||||  |||||||| |  ||| ||||||| |||||||||||| ||||||||||||||||||||    
T  25944505 caagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaatacaccaaaatggtgggaccccttccc 25944583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 19751614 - 19751691
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||| ||||||  ||||||||  || ||||||| ||||||||||||||| | ||||||||||| |||||    
T  19751614 caagtcctggaaatagcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacctattggtgggaccctttccc 19751691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 55401212 - 55401288
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttc 79  Q
    ||||||||| |||||||||| |||    |||||||| |||| ||||||| |||||||| ||||||||||||||||||    
T  55401212 caagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtgggaccccttc 55401288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 112
Target Start/End: Original strand, 15797349 - 15797379
Alignment:
Q  82 gggagctctagtgcaccgggttgcccttttt 112  Q
    |||||||||||||||||||||||||||||||    
T  15797349 gggagctctagtgcaccgggttgcccttttt 15797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 30452923 - 30452953
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttt 111  Q
    |||||||||||||||||||||||||||||||    
T  30452923 cgggagctctagtgcaccgggttgccctttt 30452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 112
Target Start/End: Complemental strand, 6242312 - 6242283
Alignment:
Q  83 ggagctctagtgcaccgggttgcccttttt 112  Q
    ||||||||||||||||||||||||||||||    
T  6242312 ggagctctagtgcaccgggttgcccttttt 6242283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10870072 - 10870025
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgta 52  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||    
T  10870072 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 31592975 - 31593004
Alignment:
Q  81 cgggagctctagtgcaccgggttgcccttt 110  Q
    ||||||||||||||||||||||||||||||    
T  31592975 cgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 54484819 - 54484852
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttttat 114  Q
    |||||||| |||||||||||||||||||||||||    
T  54484819 cgggagctttagtgcaccgggttgccctttttat 54484852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 8e-27; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 34725217 - 34725140
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34725217 caagtcctggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacactaaatggtgggaccccttcccgg 34725140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 35253306 - 35253229
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35253306 caagtcctcgaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 35253229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 32632677 - 32632601
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32632677 caagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 32632601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 38478401 - 38478328
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38478401 caagtcctagaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtggaaccccttc 38478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 12126955 - 12126879
Alignment:
Q  9 aagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| ||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12126955 aagttctggaaacagcttcttgtgtaaaacagggtaaggctgcgtacaatacaccaaattgtgggaccccttcccgg 12126879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 47214548 - 47214623
Alignment:
Q  8 caagtcctggaaacagcctcgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||| ||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47214548 caagtcctggaaacagtctcttgtttaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttccc 47214623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 4349703 - 4349754
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4349703 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 4349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 6983930 - 6983853
Alignment:
Q  8 caagtcctggaaacagcctcgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||||||||||||| ||||    
T  6983930 caagtcctggaaacagcctcgtataaaaaacagggtaagtatgcgtacaatacaccaaatggtgggacccctttccgg 6983853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 46248074 - 46247995
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||||| |||    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46248074 caagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccgg 46247995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 19414499 - 19414552
Alignment:
Q  29 tgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19414499 tgtaaaacaggttaaggctgcgtacaatacaccaaatggtgggaccccttcccg 19414552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 30395849 - 30395768
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  30395849 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 30395768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 31382330 - 31382259
Alignment:
Q  12 tcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||||| |||   |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatggtgggaccccttcc 31382259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 23768441 - 23768364
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||| ||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23768441 caagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggacaccttccc 23768364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 41319926 - 41319849
Alignment:
Q  9 aagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||| ||| |||    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41319926 aagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccg 41319849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 45812656 - 45812581
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||| |||||| |||  |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  45812656 caagtcctgaaaacagtctcttgtgtaaaagagggtaaggctgcatacaatacaccaaatggtgggaccccttccc 45812581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 10378828 - 10378781
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10378828 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 10378781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 18724666 - 18724587
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  18724666 caagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaaatcttgggaccccttcccgg 18724587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 46991841 - 46991920
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| |||| |||    ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  46991841 caagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccgaatggtgggaccccttcccgg 46991920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 11596550 - 11596625
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||| |||||| |||| |||   ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11596550 caagtcctagaaacaacctcttgtgtaaaaacagggtaaggctgcgtataatacaccaaatggtgggaccccttcc 11596625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14617075 - 14617154
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaa--acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  |||||||  ||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  14617075 caagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacaccaaatggtgggatcccttcccgg 14617154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 18944680 - 18944761
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||| ||||||||||||||| |||    |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18944680 caaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccgg 18944761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 27201684 - 27201765
Alignment:
Q  8 caagtcctggaaacagcctcgtgta----aaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||     |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27201684 caagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccgg 27201765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 15505632 - 15505679
Alignment:
Q  35 acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  15505632 acagggtaagactgcgtacaatacaccaaatggtgggaccccttcccg 15505679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 6925137 - 6925216
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||| |||||| |||    |||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  6925137 caagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaatggtgggaccccttcccgg 6925216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 19932848 - 19932795
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  19932848 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccgg 19932795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 20004213 - 20004134
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacacca--aatggtgggaccccttccc 81  Q
    ||||||||||||||||||||  ||||||||  || ||||||||||||||||||||||||  |||||||||||||||||||    
T  20004213 caagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttccc 20004134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 21910742 - 21910692
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  21910742 aaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccg 21910692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 10668262 - 10668343
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||| |||    |||||| ||||||| ||||||||||||||||  |||||||||||||||||||||    
T  10668262 caagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttcccgg 10668343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 18742052 - 18742001
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttccc 81  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18742052 aaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttccc 18742001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 31442483 - 31442431
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccgg 83  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  31442483 aaaacagggtaaggatgcgtacaatacaccaaaatggtgggaccccttcccgg 31442431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 43768205 - 43768253
Alignment:
Q  33 aaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  43768205 aaacagggtaaggctgcctacaatacaccaattggtgggaccccttccc 43768253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 44485195 - 44485151
Alignment:
Q  39 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  44485195 ggtaaggctgcgtacaatacaccaaatggttggaccccttcccgg 44485151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 25468384 - 25468307
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    ||||||||||||||| ||||  ||||||||  |||||||||| |||||||||||||||||||||| ||||| ||||||    
T  25468384 caagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatggttggacctcttccc 25468307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 2435908 - 2435833
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggacccctt 78  Q
    |||||||||||||||||||| |||    |||| |||||||| |||||||||||||||| |||||||||||||||||    
T  2435908 caagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacaccaaaatggtgggacccctt 2435833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 35005188 - 35005241
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  35005188 aaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccgg 35005241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 45402131 - 45402210
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggt--aagg-ctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| |||   ||||||||||  |||  ||||||||||||||||||||||||||||||||||||    
T  45402131 caagtcctggaaacagcctcttgtgtaaaaacagggttcaagttctgcgtacaatacaccaaatggtgggaccccttccc 45402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 22930188 - 22930114
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||||||||  |||   |||||||||||||| || | |||||||||||||||||||||||||||||    
T  22930188 caagtcctggaaacagccttttgtgtaaaaacagggtaaggttgtg-acaatacaccaaatggtgggaccccttcc 22930114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 17470467 - 17470390
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcc 80  Q
    |||||||| ||||||||||| |||    |||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  17470467 caagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatagtgggacccgttcc 17470390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 27474318 - 27474396
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||| ||| |||   ||||||||| || ||||||||||||||||  |||||||||||||||||||||    
T  27474318 caagtcttggaaacagtctcttgtgtaaaaacagggcaaagctgcgtacaatacactgaatggtgggaccccttcccgg 27474396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 35117889 - 35117808
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacacc--aaatggtgggaccccttcccgg 83  Q
    ||||||||||||| ||||||  ||||||||  ||||||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  35117889 caagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccgg 35117808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 1517404 - 1517357
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||||| | ||||||||||||||||||||||| |||||||||||||||    
T  1517404 aaaacatgataaggctgcgtacaatacaccaattggtgggaccccttc 1517357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 4430119 - 4430080
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtggg 71  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  4430119 aaaacagggtaagactgcgtacaatacaccaaatggtggg 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 23796507 - 23796579
Alignment:
Q  13 cctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||  ||||||||  ||  |||||| ||||||||||||||||||||||| |||||||||||    
T  23796507 cctggaaacagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaaatggtgagaccccttccc 23796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 42304302 - 42304249
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacac--caaatggtgggaccccttcccgg 83  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||||||||||    
T  42304302 aaaacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccgg 42304249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 22324930 - 22324989
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaa 64  Q
    |||||| ||||||||||||| |||   |||||||||||||||||| ||||||||||||||    
T  22324930 caagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcatacaatacaccaaa 22324989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 27136745 - 27136696
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcc 80  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  27136745 aaaacatggtaaggttgcgtacaatacaccaaaatggtgggaccccttcc 27136696  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 33223022 - 33223093
Alignment:
Q  9 aagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacacc-aaatggtgggacccc 76  Q
    ||||| ||||||||||||| |||   ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  33223022 aagtcatggaaacagcctcttgtgtaaaaacagggaaaggttgcgtacaatacaccaaaatggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 20999943 - 20999895
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||| || ||||||||||||||||||||||||| |||| ||||||||    
T  20999943 aaaacaaggcaaggctgcgtacaatacaccaaatgatggggccccttcc 20999895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 8197108 - 8197155
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 79  Q
    |||||| ||||||||| |||||| ||||||||||||| ||||||||||    
T  8197108 aaaacatggtaaggctacgtacagtacaccaaatggtaggaccccttc 8197155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 45264521 - 45264445
Alignment:
Q  8 caagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttc 79  Q
    ||||||||||||||| |||| |||    ||||||| ||||||||| || ||||||||| ||||||||||||||||||    
T  45264521 caagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttc 45264445  T

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Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 50812005 - 50812055
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggaccccttcccg 82  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  50812005 aaaacagggtaaggttgcgtacaatacaccaaaatggt-ggaccccttcccg 50812055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 4249520 - 4249486
Alignment:
Q  48 gcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||||||||| |||||||||    
T  4249520 gcgtacaatacaccaaatggtgggatcccttcccg 4249486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 4249844 - 4249810
Alignment:
Q  48 gcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||||||||| |||||||||    
T  4249844 gcgtacaatacaccaaatggtgggatcccttcccg 4249810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 4250168 - 4250134
Alignment:
Q  48 gcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    ||||||||||||||||||||||||| |||||||||    
T  4250168 gcgtacaatacaccaaatggtgggatcccttcccg 4250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 4430080 - 4430046
Alignment:
Q  44 ggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    ||||||||||||||||||||||||||| |||||||    
T  4430080 ggctgcgtacaatacaccaaatggtggaacccctt 4430046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 6358190 - 6358236
Alignment:
Q  36 cagggtaaggctgcgtacaatacacc-aaatggtgggaccccttccc 81  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  6358190 cagggtaaagctgcgtacaaaacaccaaaatggtgggaccccttccc 6358236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 15511271 - 15511193
Alignment:
Q  9 aagtcctggaaacagcctcgtgt----aaaacagggtaaggctgcg--tacaatacacc-aaatggtgggaccccttcc 80  Q
    ||||||||||||| ||||| |||    |||||||||||||||||||  ||||||||||| ||||||||| |||||||||    
T  15511271 aagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggctgcggatacaatacaccaaaatggtggtaccccttcc 15511193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 19414566 - 19414596
Alignment:
Q  81 cgggagctctagtgcaccgggttgccctttt 111  Q
    |||||||||||||||||||||||||||||||    
T  19414566 cgggagctctagtgcaccgggttgccctttt 19414596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 20036291 - 20036337
Alignment:
Q  37 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||  ||||| |||||||||||||||||| ||||||||||||    
T  20036291 agggtaagattgcgttcaatacaccaaatggtggaaccccttcccgg 20036337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 21723728 - 21723784
Alignment:
Q  15 tggaaacagcctcgtgta---aaacagggtaaggctgcgtacaatacaccaaatggt 68  Q
    ||||||||||||| ||||   ||| |||||||||||| |||||||||||||||||||    
T  21723728 tggaaacagcctcttgtataaaaatagggtaaggctgagtacaatacaccaaatggt 21723784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 34149076 - 34149005
Alignment:
Q  13 cctggaaacagcctcgtgt----aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    ||||||||||||||| |||    |||| ||||||||| ||||||||| | ||||||||||| ||||||||||    
T  34149076 cctggaaacagcctcttgtgtagaaaatagggtaaggttgcgtacaaaagaccaaatggtgagaccccttcc 34149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 46859131 - 46859173
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacacc-aaatggtgggac 73  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  46859131 aaaacagggtaagactgcgtacaatacaccaaaatggtgggac 46859173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 48746 - 48676
Alignment:
Q  15 tggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48746 tggaaacagcctcttgtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 48676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 55; Significance: 5e-22; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 10169 - 10092
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  10169 caagtcctggaaacagcctcttgtgtaaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcccgg 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 20497 - 20420
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  20497 caagtcctggaaacagcctcttgtgtaaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcccgg 20420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 11145 - 11222
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||    
T  11145 caagtcctggaaacagcctcttgtgtaaaacaaagtaaggctgcttacaatacaccaaatggtgggacaccttcccgg 11222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 50; Significance: 4e-19; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 43673 - 43745
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggacccctt 78  Q
    ||||| ||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43673 caagttctggaaacagcgtcttgtgtaaaacaaggtaaggctgcgtacaatacaccaaatggtgggacccctt 43745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 24865 - 24815
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24865 aaaacagggtaaggctgcgtacaacacaccaaatggtgggaccccttcccg 24815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 46873 - 46924
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  46873 aaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgg 46924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 1706 - 1629
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||| ||||| ||||  |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  1706 caagtcctgaaaacaacctcttgtgtaaaacaggataaggctgcatacaatacaccaaatgatgggaccccttcccgg 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 13144 - 13068
Alignment:
Q  8 caagtcctggaaacagcctcgtgt---aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| ||    |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  13144 caagtcctggaaacagcctcttgcgtaaaaacaaggtaaggctgcgtacaatacaccgaatggtgggaccccttccc 13068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 24220 - 24175
Alignment:
Q  38 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 24175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 35110 - 35062
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35110 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctttcc 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 10852 - 10903
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  10852 aaaacagggtagggctgcgtccaatacaccaaatggtgggaccccttcccgg 10903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 58991 - 59070
Alignment:
Q  8 caagtcctggaaacagcctcgtgta----aaacagggtaaggctgcgtacaatacacc--aaatggtgggaccccttccc 81  Q
    |||||||||||||||||||| ||||    |||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  58991 caagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttccc 59070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 72960 - 72909
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgg 83  Q
    |||||| ||||||||||| |||||||||||||||||| | ||||||||||||    
T  72960 aaaacacggtaaggctgcctacaatacaccaaatggtagtaccccttcccgg 72909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 226527 - 226456
Alignment:
Q  8 caagtcctggaaacagcctcgtgt-----aaaacagggtaaggctgcgtacaatacaccaaatggtgggacc 74  Q
    |||||||| ||||||||||| |||     |||||||||||||||||| ||||||||| ||||||||||||||    
T  226527 caagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaatggtgggacc 226456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 23641 - 23690
Alignment:
Q  32 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 81  Q
    |||||||||| ||||||||||||||  | |||||||||||||||||||||    
T  23641 aaaacagggtgaggctgcgtacaatgtagcaaatggtgggaccccttccc 23690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 3593 - 3636
Alignment:
Q  39 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 82  Q
    |||||||||||||| |||||||| |||| |||||||||||||||    
T  3593 ggtaaggctgcgtataatacaccgaatgatgggaccccttcccg 3636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 4171 - 4253
Alignment:
Q  8 caagtcctggaaacagcctc--gtgtaaaa--cagggtaaggctgcgtacaatacacc---aaatggtgggaccccttcccgg 83  Q
    ||||||||||||||| ||||  ||||||||  |||| ||||| |||||||||||||||   || |||||||||||||||||||    
T  4171 caagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataattggtgggaccccttcccgg 4253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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