View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4543_high_8 (Length: 327)
Name: NF4543_high_8
Description: NF4543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF4543_high_8 |
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[»] scaffold0129 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 9 - 323
Target Start/End: Complemental strand, 18396234 - 18395911
Alignment:
Q |
9 |
acatcatcaaagacattcaacctaaagttacctccttgatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataa |
108 |
Q |
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|||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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T |
18396234 |
acatcaccaaagacattcaacctaaagttacctccttgatatccaaagtttctctctcttgaagctctacttaaaacatgaagaatgaagtcttatataa |
18396135 |
T |
|
Q |
109 |
tgcacaagtcccgagaaaatcgtatcacaattttcactaattgtgccacgatttcaagttacttaaaatcgttccacgattttcctctttcgtgccacaa |
208 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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T |
18396134 |
tgcacaagttccgagaaaatcgtatcacaattttcactaattgtgccacgatttcaagttacttaaaatcgttccacgattttcctctttcgtgccacaa |
18396035 |
T |
|
Q |
209 |
tttttcgaatcaaa---------accttaaccaaaatcgcgtcacgatttttgcaaatcacggcccaatttttgtcgatattttagacaaatttcaacat |
299 |
Q |
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|||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
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T |
18396034 |
tttttcgaatcaaaacctccaaaaccttaaccaaaatctcgtcacgatttttgcaaatcgcggcccaatttttgtcgattttttagacaaatttcaacat |
18395935 |
T |
|
Q |
300 |
ttgttttccttgatgatgtccatc |
323 |
Q |
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|
|||||||||||||| ||| ||||| |
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|
T |
18395934 |
ttgttttccttgattatggccatc |
18395911 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 27073692 - 27073633
Alignment:
Q |
64 |
ctcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgag |
123 |
Q |
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|
||||||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |
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|
T |
27073692 |
ctcttgaagtcctacctaaaacttgaagaatgaagtcttatataatgcaaaagccccgag |
27073633 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 27204621 - 27204680
Alignment:
Q |
64 |
ctcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgag |
123 |
Q |
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||||||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |
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|
T |
27204621 |
ctcttgaagtcctacctaaaacttgaagaatgaagtcttatataatgcaaaagccccgag |
27204680 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 23565300 - 23565363
Alignment:
Q |
14 |
atcaaagacattcaacctaaagttacctcctt-gatacccaaagtttctcactcttgaagctct |
76 |
Q |
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||||||||| | ||||||||||||||||||| |||| || ||||||||| ||||||||||||| |
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|
T |
23565300 |
atcaaagacccttaacctaaagttacctcctttgatatcccaagtttctctctcttgaagctct |
23565363 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 40808517 - 40808414
Alignment:
Q |
16 |
caaagacattcaacc-taaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcac |
113 |
Q |
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|
|||||||| |||||| ||||||||||||||| ||| | | |||||| || ||||| ||| ||||||| ||||||||||||||||| |||||| |||| |
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T |
40808517 |
caaagacactcaaccctaaagttacctcctttgattctctaagtttatctctctttaagtcctacttataacatgaagaatgaagttctatatagagcac |
40808418 |
T |
|
Q |
114 |
aagt |
117 |
Q |
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|
|||| |
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|
T |
40808417 |
aagt |
40808414 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 36146661 - 36146759
Alignment:
Q |
14 |
atcaaagacattcaac-ctaaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatg |
110 |
Q |
|
|
||||||||| ||||| |||||||||||||||| ||| || |||||| || ||||||||||||| | |||| ||||||||||||| |||| |||||| |
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T |
36146661 |
atcaaagaccctcaacactaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcccaaaaaatgaagaatgaagccttaaataatg |
36146759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 11712244 - 11712361
Alignment:
Q |
16 |
caaagacattcaacc-taaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcac |
113 |
Q |
|
|
|||||||| |||||| |||||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||| ||||||||| |||||||| ||||| |
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|
T |
11712244 |
caaagacactcaaccctaaagttacctcatttgataccctaagtttctctctcttgaagctctacctaaaacataaagaatgaaaccttatatagtgcac |
11712343 |
T |
|
Q |
114 |
aagtcccgagaaaatcgt |
131 |
Q |
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|
| ||||| |||||||||| |
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|
T |
11712344 |
atgtcccaagaaaatcgt |
11712361 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 32902442 - 32902524
Alignment:
Q |
29 |
cctaaagttacctcct-tgatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatg |
110 |
Q |
|
|
|||||||||||||| | |||| || ||||||||| |||||||||| || || ||||||||||||||||||||||||| |||| |
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|
T |
32902442 |
cctaaagttacctcatctgatttcccaagtttctctctcttgaagccctcctcaaaacatgaagaatgaagtcttatacaatg |
32902524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 29796578 - 29796656
Alignment:
Q |
29 |
cctaaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatata |
107 |
Q |
|
|
||||||||||||||||| ||| | ||||||||| ||||||||| ||| || |||||||||||||||||| |||||||| |
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|
T |
29796578 |
cctaaagttacctcctttgatttctcaagtttctctctcttgaag-tctcctcaaaacatgaagaatgaagccttatata |
29796656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 7597462 - 7597380
Alignment:
Q |
81 |
aaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaa-tcgtatcacaattttcactaattgtgccacgattt |
162 |
Q |
|
|
|||||||||||||||||| |||||||| ||| ||| || |||||||| | || | | |||||||| |||||||||||||||| |
|
|
T |
7597462 |
aaaacatgaagaatgaagccttatatagtgctcaaatctcgagaaaaattgtgccccgattttcaccaattgtgccacgattt |
7597380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 8153622 - 8153572
Alignment:
Q |
81 |
aaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaatcgt |
131 |
Q |
|
|
|||||||||||||||||| ||| ||||||| ||||| ||||||||||||| |
|
|
T |
8153622 |
aaaacatgaagaatgaagccttttataatgtacaagatccgagaaaatcgt |
8153572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 3232092 - 3232145
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatata |
107 |
Q |
|
|
|||||||| ||||| | |||||||| |||||||||||||||||| |||||||| |
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|
T |
3232092 |
aagtttctttctcttaatgctctactcaaaacatgaagaatgaagccttatata |
3232145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 8863409 - 8863333
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaatcgt |
131 |
Q |
|
|
|||||| || |||||||||||| || |||||||||||||||||| |||||||| |||||| | | ||||||||||| |
|
|
T |
8863409 |
aagtttttctctcttgaagctc-acccaaaacatgaagaatgaagccttatatagtgcacatgatctgagaaaatcgt |
8863333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 18141706 - 18141659
Alignment:
Q |
55 |
agtttctcactcttgaagctctacttaaaacatgaagaatgaagtctta |
103 |
Q |
|
|
|||||||| |||||||||||||||| |||| ||||||||||||| |||| |
|
|
T |
18141706 |
agtttctctctcttgaagctctactcaaaa-atgaagaatgaagcctta |
18141659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 4561021 - 4560904
Alignment:
Q |
16 |
caaagacattcaac-ctaaagttacctcct-tgatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcac |
113 |
Q |
|
|
|||||||| ||||| ||||||||| ||||| |||| || |||||| || ||||||||| | | || ||||||||||||||||||||||||| ||||||| |
|
|
T |
4561021 |
caaagacactcaactctaaagttatctcctctgatttcctaagtttttctctcttgaagttattctaaaaacatgaagaatgaagtcttatacaatgcac |
4560922 |
T |
|
Q |
114 |
aagtcccgagaaaatcgt |
131 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
4560921 |
aagtcccgagaaaatcgt |
4560904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 28671841 - 28671797
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaag |
98 |
Q |
|
|
||||||||| |||||||||| ||||| |||||||||||||||||| |
|
|
T |
28671841 |
aagtttctctctcttgaagccctactcaaaacatgaagaatgaag |
28671797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 11067221 - 11067134
Alignment:
Q |
14 |
atcaaagacattcaacc-taaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagt |
99 |
Q |
|
|
|||||||||| |||||| ||||||||||||||| ||| || |||||||| |||||||||| || || |||| |||||||||||||| |
|
|
T |
11067221 |
atcaaagacaatcaaccataaagttacctcctttgatttccctagtttctctctcttgaagccctcctcaaaaaatgaagaatgaagt |
11067134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 36773462 - 36773387
Alignment:
Q |
29 |
cctaaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtctta |
103 |
Q |
|
|
||||||||||||||||| ||| || |||||||| |||||||||||||| |||| |||||||||||||||||| |
|
|
T |
36773462 |
cctaaagttacctcctttgatttccctagtttctctctcttgaagctctatacaaaaaatgaagaatgaagtctta |
36773387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 19854 - 19933
Alignment:
Q |
30 |
ctaaagttacctccttgatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatg |
110 |
Q |
|
|
||||||||||||||||||| || ||||||| | |||||||||| ||||| |||||| ||||||||||||| ||||||||| |
|
|
T |
19854 |
ctaaagttacctccttgatttcccaagtttcactctcttgaagc-ctactcaaaacaagaagaatgaagtcatatataatg |
19933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 21704109 - 21704225
Alignment:
Q |
54 |
aagtttctcactcttgaagc-tctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaatcgtatcacaattttcactaattgt |
152 |
Q |
|
|
||||||||| |||||||||| ||||| |||||||||| |||||||||||| ||| |||||| |||| | |||||||| | ||||||| ||||| || |
|
|
T |
21704109 |
aagtttctctctcttgaagcctctacacaaaacatgaaaaatgaagtcttaaatagtgcacatgtcctgtcaaaatcgtgccccaattttacctaatcgt |
21704208 |
T |
|
Q |
153 |
gccacgatttcaagtta |
169 |
Q |
|
|
|||||||||||| |||| |
|
|
T |
21704209 |
gccacgatttcacgtta |
21704225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 3739397 - 3739511
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaatcgtatcacaattttcactaattgtg |
153 |
Q |
|
|
||||||||| |||||||| | |||| ||||||||||||||||||||||| |||||||||| |||||| |||||||| | | |||| ||| ||| || |
|
|
T |
3739397 |
aagtttctctctcttgaaa-tgtactcaaaacatgaagaatgaagtcttaaataatgcacatgtcccgtcaaaatcgtgcctcgatttacacacattttg |
3739495 |
T |
|
Q |
154 |
ccacgatttcaagtta |
169 |
Q |
|
|
||||||||||| |||| |
|
|
T |
3739496 |
ccacgatttcacgtta |
3739511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 6677394 - 6677306
Alignment:
Q |
16 |
caaagacattcaacc-taaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtctta |
103 |
Q |
|
|
|||||||| |||||| ||||||||||||||| ||||||| || |||||| ||||||||| ||||| |||||||||||||||||| |||| |
|
|
T |
6677394 |
caaagacactcaaccctaaagttacctcctttgataccctaaatttctctttcttgaagc-ctactcaaaacatgaagaatgaagcctta |
6677306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 36463657 - 36463738
Alignment:
Q |
29 |
cctaaagttacctcct-tgatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatg |
110 |
Q |
|
|
|||||||||||||||| |||| || |||||| || |||||||||||||||| |||| ||||||||||||| |||| |||||| |
|
|
T |
36463657 |
cctaaagttacctcctatgatttcccaagtttttctctcttgaagctctactcaaaa-atgaagaatgaagccttaaataatg |
36463738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 4587835 - 4587792
Alignment:
Q |
64 |
ctcttgaagctctacttaaaacatgaagaatgaagtcttatata |
107 |
Q |
|
|
||||||||||||| || |||||||||||||||||||||| |||| |
|
|
T |
4587835 |
ctcttgaagctctcctcaaaacatgaagaatgaagtcttttata |
4587792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 43208174 - 43208207
Alignment:
Q |
76 |
tacttaaaacatgaagaatgaagtcttatataat |
109 |
Q |
|
|
|||| ||||||||||||||||||||||||||||| |
|
|
T |
43208174 |
tactcaaaacatgaagaatgaagtcttatataat |
43208207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 8871315 - 8871390
Alignment:
Q |
29 |
cctaaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtctta |
103 |
Q |
|
|
||||||||||||| ||| |||| || |||||||| ||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
8871315 |
cctaaagttacctgctttgatatccctagtttctctctcttgaagctctaccaaaaacatgaagaatgaagcctta |
8871390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 2263271 - 2263327
Alignment:
Q |
59 |
tctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaa |
115 |
Q |
|
|
|||| ||||||| ||||||| |||||||||||||||||| |||||||| ||||||| |
|
|
T |
2263271 |
tctctctcttgacgctctacacaaaacatgaagaatgaagccttatatagtgcacaa |
2263327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 28265821 - 28265898
Alignment:
Q |
29 |
cctaaagttacctcctt-gatacccaaagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttata |
105 |
Q |
|
|
||||||||||||||||| ||| || |||||||| ||||||||||||| | |||| ||||||||||||| |||||| |
|
|
T |
28265821 |
cctaaagttacctcctttgatttccctagtttctctctcttgaagctcttcccaaaaaatgaagaatgaagccttata |
28265898 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 25116455 - 25116407
Alignment:
Q |
81 |
aaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaatc |
129 |
Q |
|
|
|||||||||||||||||| |||||||| |||||| | || ||||||||| |
|
|
T |
25116455 |
aaaacatgaagaatgaagacttatatagtgcacatgacctgagaaaatc |
25116407 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 49918278 - 49918210
Alignment:
Q |
14 |
atcaaagacattcaacc-taaagttacctcctt-gatacccaaagtttctcactcttgaagctctactt |
80 |
Q |
|
|
||||||||| ||||||| ||||||||||||||| ||| || ||||||||| ||||| ||||||||||| |
|
|
T |
49918278 |
atcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctactt |
49918210 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 5611451 - 5611524
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaat |
128 |
Q |
|
|
||||||||| ||||||||||||| | ||||||||||||||||||||||| || ||| ||||| | ||||||||| |
|
|
T |
5611451 |
aagtttctctctcttgaagctctt-tcaaaacatgaagaatgaagtcttaaattatgtacaagactcgagaaaat |
5611524 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 21156738 - 21156811
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagtcccgagaaaat |
128 |
Q |
|
|
||||||||| ||||||||||||| | ||||||||||||||||||||||| || ||| ||||| | ||||||||| |
|
|
T |
21156738 |
aagtttctctctcttgaagctctt-tcaaaacatgaagaatgaagtcttaaattatgtacaagactcgagaaaat |
21156811 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 40519479 - 40519532
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatata |
107 |
Q |
|
|
||||||||| |||||||||||||||| || |||||| |||||||| |||||||| |
|
|
T |
40519479 |
aagtttctctctcttgaagctctactcaatacatgatgaatgaagccttatata |
40519532 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 2075350 - 2075403
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatata |
107 |
Q |
|
|
||||||||| |||||||||| ||| |||||||||||||||||| |||||||| |
|
|
T |
2075350 |
aagtttctctctcttgaagcctcactcaaaacatgaagaatgaagccttatata |
2075403 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 9666754 - 9666797
Alignment:
Q |
59 |
tctcactcttgaagctctacttaaaacatgaagaatgaagtctta |
103 |
Q |
|
|
|||| |||||||||||||||| |||| |||||||||||||||||| |
|
|
T |
9666754 |
tctctctcttgaagctctactcaaaa-atgaagaatgaagtctta |
9666797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 37761765 - 37761820
Alignment:
Q |
54 |
aagtttctcactcttgaagctctacttaaaacatgaagaatgaagtcttatataatg |
110 |
Q |
|
|
||||| ||| |||||||||| | ||| |||||||||||||| ||||||||||||||| |
|
|
T |
37761765 |
aagttactctctcttgaagc-caactaaaaacatgaagaataaagtcttatataatg |
37761820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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