View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4545_low_6 (Length: 322)
Name: NF4545_low_6
Description: NF4545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4545_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 30785918 - 30786212
Alignment:
| Q |
19 |
ttcttgccattctatctggacttaacttgttaattgattcatt----ctaaataggattttgattatgtttaatagatatgtatatgctttgatgactaa |
114 |
Q |
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| T |
30785918 |
ttcttgccattctatctggagttaacttgttgattgattcattaattctaaataggattttgattatgtttaatagatatgtatatgctttgatgattaa |
30786017 |
T |
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| Q |
115 |
ttataggtttgattgtgaaattactttcgttaattataatcacgtgttaaacaatttaataatgcatttcttgttataataccatgaaacatcgctgctg |
214 |
Q |
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| T |
30786018 |
ttataggtttgattgtgaaattacttttgttaattataatcacgt-ttaaacaatttaataatgaatttcttgttataataccatgtaacatcgctgctg |
30786116 |
T |
|
| Q |
215 |
gaatctgtgacagaaacattgccagtataccatgaaacaatgaagttgcaacaatgcatcgaacatgtttgttgtttggtttttcgccatccttca |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30786117 |
gaatctgtgacagaaacattgccagtataccatgaaacaatgaagttgcaacaatgcatcgaacatgtttgttgtttggtttttcgccatccttca |
30786212 |
T |
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