View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4547_high_11 (Length: 245)
Name: NF4547_high_11
Description: NF4547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4547_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 45347721 - 45347946
Alignment:
| Q |
13 |
taactgaagggagagggagaaagatatatggtaggttcgacacataacggagggggagatagcggtaagtcatggagggaagaactcctcggactgcgaa |
112 |
Q |
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| T |
45347721 |
taacttaagggagagggagagagatatatggtaggttcgacacataacggagggggagatagcggtaagtcattgatggaagacctcctcggacttctaa |
45347820 |
T |
|
| Q |
113 |
ggatccacattaagcgtggcgtcaacctcgccgttcgtgatgttaatactagtgatccatatgccgtcgttaagatgggcaagcaggttatctttctatt |
212 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45347821 |
ggatccgcattaagcgtggcgtcaacctcgccgttcgtgatgttaatactagtgatccatatgccgtcgttaagatgggcaagcaggttatctttctatt |
45347920 |
T |
|
| Q |
213 |
tccatcatcctaagttccttcctttg |
238 |
Q |
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|||||||||||||||||||||||||| |
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| T |
45347921 |
tccatcatcctaagttccttcctttg |
45347946 |
T |
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