View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4547_high_13 (Length: 228)
Name: NF4547_high_13
Description: NF4547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4547_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 45347485 - 45347706
Alignment:
| Q |
7 |
cttccttcctgtgtgcctcacaacttacacataatctctccctcccaacccgaggattcaaatatttacctgtcaactttctataacaaccacctgaaat |
106 |
Q |
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| T |
45347485 |
cttccttcctgtgtgcctcacaacttacacataatctctcccccccaacccgaggattcaaatatttaactgtcaactttctataacaaccacctgaaat |
45347584 |
T |
|
| Q |
107 |
aaccgaattctggtgggctcattgttcaa---tattgtttcattttccaattttggattattatttgatggtagttaatcatgaatcattttgacttgtt |
203 |
Q |
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||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
45347585 |
aaccgaactctggtgggctcattgttcaatattattgtttcattttccaatttttaattattatttgatggtagttaatcatgaatcattctgacttgtt |
45347684 |
T |
|
| Q |
204 |
tctattttttgcagtgtaaaag |
225 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
45347685 |
tctattttttgcagtgtaaaag |
45347706 |
T |
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