View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4548-Insertion-2 (Length: 343)
Name: NF4548-Insertion-2
Description: NF4548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4548-Insertion-2 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 6 - 305
Target Start/End: Original strand, 10011683 - 10011981
Alignment:
| Q |
6 |
catatagtacaccaaggtacattattaattgtggtaagaaagcaatgtctgaaggtctatatgtgagccatggagaatataaatggtttttggatgtatt |
105 |
Q |
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| T |
10011683 |
catatagtacaccaaggta-attattaattgtggtaagaaagcaacgtctgaaggtctatatgtgagccatggagaatataaatggtttttggatgtatt |
10011781 |
T |
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| Q |
106 |
gagtgtttactgactcatgagtagtaacatccatatataggcatagagtgcaagcaaatagtgtatctaggtgcatggaaaatataccgaaataaattat |
205 |
Q |
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| T |
10011782 |
gattgtttactgactcatggttagtaacatccatatataggcatagagtgcaggcaaatagtgtatctaggtgcatggaaaatataccgaaataaattct |
10011881 |
T |
|
| Q |
206 |
gagtgcgaaggcttagagttttgtcattccaagacacttcattcaattaattaaggagggaagagctgatttcgaaatttaaattatttggagccatttt |
305 |
Q |
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| T |
10011882 |
gagtgggaaggcttagagttttgtcattccaagatacttcattcaattaattaaggagggaagagctgatttcgaaatttaaattatttggagccatttt |
10011981 |
T |
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