View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4548-Insertion-3 (Length: 299)
Name: NF4548-Insertion-3
Description: NF4548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4548-Insertion-3 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 8 - 299
Target Start/End: Original strand, 42089236 - 42089527
Alignment:
| Q |
8 |
aatttagtgattatcatgatttggttatttcgttaatgtaaagatacatgaaagggaacaagaaataattatattattctataatgcgtgggtgagtgat |
107 |
Q |
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| T |
42089236 |
aatttagtgattatcatgatttggttatttcgttaatgtaaagatacatgaaagggaacaagaaatcattatattattctataatgcgtgggtgagtgat |
42089335 |
T |
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| Q |
108 |
ctcaaagaaacataactgagacggcacggcacacattgggaagatttcagttggagcataataattaaatatatatgatgagtttggaaaattagctttg |
207 |
Q |
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| T |
42089336 |
ctcaaagaaacataactgggacggcacggcacacattgggaagatttcagttggagcataataattaaatatatatgatgagtttggaaaattagctttg |
42089435 |
T |
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| Q |
208 |
aagattaataaaatacattttgtgcattcacgtggtcataataaacctgttggttatgaattatgcacatgaagacttcatcttttttcggg |
299 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42089436 |
aagattaataaaatacattttgtgcattcacgtgatcataataaacctgttggttatgaattatgcacatgaagacttcatcttttttcggg |
42089527 |
T |
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