View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4558-Insertion-1 (Length: 1072)

Name: NF4558-Insertion-1
Description: NF4558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4558-Insertion-1
NF4558-Insertion-1
[»] chr1 (59 HSPs)
chr1 (8-1028)||(38882277-38883306)
chr1 (279-397)||(37842360-37842480)
chr1 (287-419)||(25479534-25479667)
chr1 (276-419)||(24915034-24915179)
chr1 (279-385)||(34952160-34952268)
chr1 (279-377)||(49888712-49888812)
chr1 (285-406)||(51695491-51695613)
chr1 (304-396)||(7218080-7218173)
chr1 (279-386)||(7472257-7472365)
chr1 (333-393)||(26779934-26779995)
chr1 (279-424)||(3887610-3887757)
chr1 (281-386)||(29793729-29793836)
chr1 (279-386)||(36151521-36151630)
chr1 (333-425)||(49938747-49938840)
chr1 (281-395)||(1510317-1510432)
chr1 (279-384)||(5756704-5756811)
chr1 (333-395)||(34290236-34290299)
chr1 (333-418)||(6102154-6102240)
chr1 (320-393)||(39270434-39270508)
chr1 (333-397)||(10744301-10744366)
chr1 (282-397)||(31517745-31517862)
chr1 (283-351)||(36070199-36070268)
chr1 (333-425)||(38503442-38503535)
chr1 (304-425)||(473135-473256)
chr1 (311-425)||(3233992-3234107)
chr1 (333-395)||(7137005-7137068)
chr1 (342-424)||(7941615-7941698)
chr1 (340-418)||(45975697-45975776)
chr1 (304-425)||(17603361-17603483)
chr1 (276-357)||(27976537-27976619)
chr1 (279-386)||(7244674-7244782)
chr1 (276-309)||(38189701-38189734)
chr1 (279-355)||(38578472-38578549)
chr1 (311-384)||(40394904-40394977)
chr1 (279-377)||(1432460-1432560)
chr1 (279-393)||(3224368-3224484)
chr1 (279-399)||(7069245-7069368)
chr1 (285-395)||(9656601-9656713)
chr1 (342-397)||(10199413-10199469)
chr1 (333-392)||(12564509-12564569)
chr1 (278-395)||(42174801-42174918)
chr1 (276-377)||(13809940-13810043)
chr1 (327-393)||(31294530-31294597)
chr1 (362-425)||(47498816-47498879)
chr1 (272-397)||(14629971-14630100)
chr1 (333-394)||(15558217-15558279)
chr1 (279-399)||(27145739-27145860)
chr1 (279-356)||(37841943-37842021)
chr1 (306-419)||(38018347-38018461)
chr1 (315-395)||(2777874-2777955)
chr1 (333-393)||(5592694-5592755)
chr1 (329-377)||(5924051-5924100)
chr1 (282-369)||(9572141-9572230)
chr1 (366-419)||(11941296-11941349)
chr1 (333-393)||(23902076-23902137)
chr1 (304-357)||(25006080-25006133)
chr1 (279-399)||(27820340-27820461)
chr1 (333-393)||(35179139-35179200)
chr1 (339-419)||(35925696-35925776)
[»] chr3 (61 HSPs)
chr3 (304-425)||(21367638-21367760)
chr3 (248-418)||(402526-402697)
chr3 (278-397)||(39602215-39602335)
chr3 (279-394)||(44061032-44061148)
chr3 (284-399)||(35394501-35394617)
chr3 (276-369)||(30956659-30956754)
chr3 (276-369)||(30972471-30972566)
chr3 (279-425)||(31403303-31403451)
chr3 (279-397)||(33883755-33883874)
chr3 (281-397)||(36783339-36783457)
chr3 (332-397)||(36887503-36887569)
chr3 (276-395)||(53789468-53789589)
chr3 (279-384)||(10101494-10101601)
chr3 (279-384)||(10212419-10212526)
chr3 (340-399)||(25170815-25170874)
chr3 (287-399)||(26878070-26878184)
chr3 (284-372)||(33405197-33405287)
chr3 (276-399)||(2719411-2719535)
chr3 (333-425)||(34610783-34610876)
chr3 (333-433)||(39980729-39980830)
chr3 (304-395)||(1816554-1816646)
chr3 (284-399)||(25447248-25447364)
chr3 (279-393)||(36646391-36646507)
chr3 (311-393)||(1217809-1217892)
chr3 (279-357)||(10357378-10357457)
chr3 (276-418)||(20880419-20880562)
chr3 (340-393)||(37273141-37273195)
chr3 (363-419)||(5391910-5391965)
chr3 (281-395)||(20170470-20170586)
chr3 (279-377)||(21335620-21335720)
chr3 (333-376)||(22203430-22203474)
chr3 (279-432)||(30573885-30574037)
chr3 (279-393)||(38462226-38462342)
chr3 (360-424)||(38902094-38902158)
chr3 (332-395)||(41644452-41644516)
chr3 (279-433)||(45541516-45541671)
chr3 (338-425)||(49465643-49465730)
chr3 (304-426)||(25453835-25453958)
chr3 (333-395)||(28622006-28622069)
chr3 (279-357)||(32095237-32095316)
chr3 (280-377)||(36631076-36631175)
chr3 (333-395)||(46478687-46478752)
chr3 (359-397)||(3044264-3044302)
chr3 (326-376)||(10540519-10540569)
chr3 (304-377)||(14145883-14145957)
chr3 (332-397)||(20669171-20669237)
chr3 (359-397)||(25925769-25925807)
chr3 (279-330)||(34638037-34638090)
chr3 (277-384)||(37689176-37689282)
chr3 (324-397)||(47319276-47319350)
chr3 (339-419)||(901930-902011)
chr3 (279-331)||(15304419-15304472)
chr3 (333-377)||(18405856-18405901)
chr3 (333-393)||(22214668-22214729)
chr3 (333-425)||(24085315-24085408)
chr3 (279-386)||(24887299-24887408)
chr3 (336-384)||(26990509-26990558)
chr3 (342-386)||(34924554-34924599)
chr3 (277-384)||(35959474-35959583)
chr3 (333-397)||(40665429-40665494)
chr3 (360-397)||(52440667-52440704)
[»] chr7 (43 HSPs)
chr7 (292-425)||(39967878-39968013)
chr7 (278-425)||(48469988-48470137)
chr7 (279-425)||(33678725-33678873)
chr7 (278-425)||(19302540-19302685)
chr7 (283-395)||(40688993-40689107)
chr7 (304-392)||(44821930-44822019)
chr7 (339-424)||(34035923-34036009)
chr7 (278-384)||(420304-420412)
chr7 (326-397)||(2825236-2825308)
chr7 (291-425)||(20526403-20526539)
chr7 (282-384)||(20881654-20881758)
chr7 (280-425)||(17248499-17248645)
chr7 (279-395)||(38138486-38138604)
chr7 (304-397)||(39907774-39907868)
chr7 (333-386)||(40530425-40530479)
chr7 (333-425)||(19022562-19022655)
chr7 (333-385)||(47130802-47130855)
chr7 (314-397)||(38010695-38010779)
chr7 (279-376)||(12110305-12110404)
chr7 (365-424)||(15740534-15740593)
chr7 (322-424)||(43648229-43648332)
chr7 (280-384)||(48507667-48507775)
chr7 (340-396)||(529382-529439)
chr7 (285-392)||(22283754-22283862)
chr7 (333-425)||(33601387-33601479)
chr7 (276-376)||(4970819-4970916)
chr7 (313-380)||(5569658-5569726)
chr7 (304-395)||(5947156-5947247)
chr7 (270-353)||(9527140-9527224)
chr7 (282-376)||(30456476-30456572)
chr7 (333-377)||(39393603-39393647)
chr7 (339-377)||(33552875-33552914)
chr7 (285-351)||(34083577-34083644)
chr7 (278-320)||(45806409-45806452)
chr7 (340-417)||(20526914-20526992)
chr7 (342-391)||(25596042-25596092)
chr7 (333-393)||(24363610-24363671)
chr7 (279-355)||(28613582-28613659)
chr7 (285-345)||(30180002-30180063)
chr7 (279-355)||(35266844-35266921)
chr7 (333-393)||(44151489-44151550)
chr7 (279-347)||(45813236-45813305)
chr7 (335-387)||(48917361-48917414)
[»] chr5 (54 HSPs)
chr5 (248-413)||(9202737-9202904)
chr5 (279-425)||(39105409-39105557)
chr5 (249-392)||(12425486-12425631)
chr5 (279-397)||(4014429-4014549)
chr5 (278-425)||(29925785-29925934)
chr5 (279-397)||(7674593-7674713)
chr5 (278-381)||(25461668-25461772)
chr5 (332-397)||(14182386-14182451)
chr5 (277-391)||(39594751-39594866)
chr5 (279-377)||(12460026-12460125)
chr5 (311-393)||(41957460-41957543)
chr5 (315-396)||(6587113-6587195)
chr5 (278-425)||(16457956-16458104)
chr5 (280-384)||(25461038-25461143)
chr5 (279-425)||(1464997-1465144)
chr5 (279-425)||(10639898-10640046)
chr5 (360-419)||(4625756-4625815)
chr5 (281-386)||(14674916-14675023)
chr5 (276-399)||(7319011-7319139)
chr5 (333-398)||(7984969-7985035)
chr5 (314-391)||(10272442-10272520)
chr5 (280-391)||(10363696-10363810)
chr5 (333-386)||(32703292-32703346)
chr5 (284-372)||(36227745-36227835)
chr5 (279-433)||(2568602-2568758)
chr5 (279-397)||(10125723-10125844)
chr5 (333-397)||(15308998-15309063)
chr5 (304-424)||(16937861-16937982)
chr5 (279-386)||(42583094-42583203)
chr5 (279-424)||(11700107-11700254)
chr5 (336-419)||(37954689-37954773)
chr5 (359-407)||(40848772-40848820)
chr5 (279-397)||(42582857-42582977)
chr5 (279-319)||(43215324-43215364)
chr5 (279-386)||(1619037-1619143)
chr5 (287-392)||(12595750-12595857)
chr5 (333-395)||(33533546-33533609)
chr5 (278-357)||(34736573-34736652)
chr5 (359-451)||(42100338-42100426)
chr5 (333-386)||(10296414-10296465)
chr5 (270-351)||(12595503-12595585)
chr5 (326-419)||(13604833-13604926)
chr5 (336-397)||(32059364-32059426)
chr5 (333-397)||(2880552-2880617)
chr5 (333-397)||(11707055-11707120)
chr5 (285-395)||(13697766-13697878)
chr5 (326-386)||(18543213-18543273)
chr5 (278-319)||(25461840-25461881)
chr5 (284-391)||(28586777-28586886)
chr5 (279-398)||(31694463-31694584)
chr5 (332-392)||(32197719-32197780)
chr5 (335-391)||(36318776-36318833)
chr5 (333-397)||(37588365-37588430)
chr5 (311-384)||(42582473-42582548)
[»] chr6 (38 HSPs)
chr6 (279-419)||(9093539-9093681)
chr6 (279-419)||(2735014-2735156)
chr6 (333-433)||(34882390-34882490)
chr6 (340-397)||(6647394-6647452)
chr6 (279-391)||(9559553-9559666)
chr6 (282-397)||(769087-769203)
chr6 (333-424)||(31624090-31624181)
chr6 (276-357)||(24626237-24626319)
chr6 (333-397)||(20368185-20368250)
chr6 (322-425)||(13907574-13907678)
chr6 (334-433)||(34403856-34403955)
chr6 (248-326)||(264285-264364)
chr6 (279-392)||(281858-281973)
chr6 (365-424)||(1575783-1575842)
chr6 (276-382)||(6909892-6910001)
chr6 (359-425)||(9912168-9912234)
chr6 (280-356)||(1402942-1403019)
chr6 (278-393)||(4006658-4006775)
chr6 (281-384)||(25099990-25100095)
chr6 (279-351)||(29274281-29274354)
chr6 (325-377)||(31812038-31812091)
chr6 (287-356)||(33828600-33828669)
chr6 (276-355)||(8147644-8147724)
chr6 (333-416)||(34430447-34430531)
chr6 (333-384)||(35099037-35099089)
chr6 (311-397)||(415282-415369)
chr6 (279-386)||(24836218-24836324)
chr6 (311-385)||(26694856-26694931)
chr6 (278-320)||(30536641-30536684)
chr6 (279-353)||(31624203-31624278)
chr6 (341-386)||(835265-835311)
chr6 (311-384)||(837234-837308)
chr6 (304-397)||(2112172-2112265)
chr6 (367-433)||(9559391-9559457)
chr6 (279-356)||(20671912-20671990)
chr6 (304-418)||(34910393-34910510)
chr6 (333-425)||(2455259-2455352)
chr6 (336-384)||(9763563-9763612)
[»] chr8 (39 HSPs)
chr8 (285-399)||(27049319-27049433)
chr8 (279-425)||(10114435-10114582)
chr8 (279-392)||(16210896-16211011)
chr8 (276-377)||(42043370-42043473)
chr8 (282-425)||(9956791-9956934)
chr8 (284-395)||(37353256-37353368)
chr8 (279-399)||(7514523-7514645)
chr8 (340-397)||(30389106-30389164)
chr8 (333-425)||(1930035-1930128)
chr8 (279-393)||(9699946-9700062)
chr8 (279-393)||(31862438-31862554)
chr8 (279-385)||(3537046-3537156)
chr8 (279-392)||(13652160-13652275)
chr8 (279-392)||(13710803-13710918)
chr8 (279-425)||(10120702-10120849)
chr8 (277-425)||(26771208-26771358)
chr8 (332-425)||(35749547-35749641)
chr8 (335-379)||(26473775-26473820)
chr8 (333-425)||(27028831-27028924)
chr8 (304-397)||(2595002-2595096)
chr8 (279-377)||(3936794-3936894)
chr8 (327-386)||(14247240-14247300)
chr8 (361-425)||(33808332-33808396)
chr8 (279-376)||(4558743-4558842)
chr8 (366-425)||(32840963-32841022)
chr8 (333-386)||(7714242-7714296)
chr8 (340-397)||(20672757-20672815)
chr8 (311-357)||(24558831-24558877)
chr8 (332-393)||(30277254-30277316)
chr8 (333-398)||(33714240-33714306)
chr8 (279-352)||(42597346-42597420)
chr8 (333-398)||(43504751-43504817)
chr8 (279-386)||(7918789-7918898)
chr8 (333-393)||(8062329-8062390)
chr8 (284-424)||(10758235-10758376)
chr8 (333-397)||(11185221-11185286)
chr8 (339-419)||(12851182-12851262)
chr8 (277-306)||(29168150-29168179)
chr8 (314-398)||(41336649-41336734)
[»] chr2 (56 HSPs)
chr2 (281-419)||(18066075-18066215)
chr2 (304-397)||(1625871-1625965)
chr2 (291-425)||(26626829-26626966)
chr2 (341-399)||(40682398-40682456)
chr2 (279-384)||(26143658-26143766)
chr2 (276-425)||(45229454-45229604)
chr2 (276-384)||(12464491-12464601)
chr2 (278-425)||(43279506-43279653)
chr2 (311-419)||(40279175-40279284)
chr2 (279-385)||(656794-656902)
chr2 (279-385)||(4026762-4026870)
chr2 (279-392)||(42457893-42458008)
chr2 (322-384)||(43985021-43985084)
chr2 (334-399)||(40279408-40279474)
chr2 (279-356)||(43199359-43199437)
chr2 (279-399)||(9174759-9174882)
chr2 (266-393)||(10285793-10285921)
chr2 (333-392)||(13736303-13736363)
chr2 (314-397)||(22681190-22681274)
chr2 (313-419)||(680483-680589)
chr2 (280-397)||(29316780-29316899)
chr2 (278-395)||(32592531-32592649)
chr2 (340-398)||(35379020-35379079)
chr2 (279-341)||(42420356-42420419)
chr2 (279-395)||(3611171-3611289)
chr2 (279-383)||(5133717-5133823)
chr2 (296-384)||(11513860-11513950)
chr2 (332-425)||(16451117-16451211)
chr2 (334-419)||(40279268-40279354)
chr2 (334-419)||(40279338-40279424)
chr2 (287-398)||(9395083-9395196)
chr2 (323-383)||(9477942-9478003)
chr2 (333-381)||(10884542-10884591)
chr2 (333-397)||(33942150-33942215)
chr2 (359-399)||(7928302-7928342)
chr2 (304-399)||(14220825-14220920)
chr2 (278-395)||(26201972-26202091)
chr2 (339-386)||(35993396-35993444)
chr2 (285-395)||(41851486-41851598)
chr2 (333-395)||(16867739-16867802)
chr2 (316-406)||(29628739-29628830)
chr2 (314-396)||(33941890-33941973)
chr2 (276-393)||(41241141-41241260)
chr2 (279-397)||(42907304-42907426)
chr2 (359-398)||(43511112-43511151)
chr2 (343-424)||(750680-750762)
chr2 (340-393)||(1939341-1939395)
chr2 (248-372)||(2416227-2416353)
chr2 (340-425)||(8017441-8017526)
chr2 (357-391)||(9877950-9877984)
chr2 (342-399)||(21788323-21788381)
chr2 (333-386)||(44590034-44590088)
chr2 (342-394)||(10646297-10646350)
chr2 (279-355)||(15377710-15377787)
chr2 (333-393)||(36415682-36415743)
chr2 (347-419)||(36534782-36534855)
[»] chr4 (52 HSPs)
chr4 (280-397)||(17884014-17884133)
chr4 (333-424)||(49202645-49202737)
chr4 (279-399)||(3155548-3155670)
chr4 (248-396)||(51630025-51630175)
chr4 (311-414)||(35571619-35571723)
chr4 (278-416)||(55414406-55414546)
chr4 (281-425)||(1706569-1706715)
chr4 (333-418)||(17822849-17822935)
chr4 (278-397)||(10192228-10192348)
chr4 (282-357)||(25885807-25885883)
chr4 (285-386)||(47118981-47119084)
chr4 (279-377)||(437457-437558)
chr4 (279-424)||(52315175-52315322)
chr4 (283-419)||(22666437-22666576)
chr4 (276-425)||(50681066-50681217)
chr4 (278-395)||(54069424-54069543)
chr4 (279-385)||(54392836-54392943)
chr4 (335-397)||(55084486-55084549)
chr4 (304-397)||(6466051-6466145)
chr4 (285-386)||(11158373-11158475)
chr4 (333-386)||(11264301-11264355)
chr4 (279-425)||(21731633-21731778)
chr4 (304-397)||(28300304-28300398)
chr4 (280-384)||(29388560-29388666)
chr4 (333-393)||(2996573-2996634)
chr4 (279-418)||(30066751-30066891)
chr4 (287-354)||(1408345-1408413)
chr4 (279-393)||(49219084-49219200)
chr4 (283-419)||(22661958-22662097)
chr4 (284-397)||(23459578-23459693)
chr4 (284-397)||(24929443-24929558)
chr4 (335-393)||(25548137-25548196)
chr4 (340-386)||(29601024-29601071)
chr4 (279-399)||(40174510-40174630)
chr4 (333-395)||(41512651-41512714)
chr4 (278-320)||(43505900-43505943)
chr4 (279-397)||(43824229-43824348)
chr4 (279-384)||(44138504-44138611)
chr4 (316-386)||(50742852-50742923)
chr4 (279-376)||(56480293-56480392)
chr4 (279-356)||(3175896-3175974)
chr4 (285-395)||(25332725-25332838)
chr4 (276-384)||(29912891-29913000)
chr4 (339-376)||(51044506-51044544)
chr4 (333-377)||(2111075-2111120)
chr4 (337-393)||(8468952-8469009)
chr4 (331-383)||(15132345-15132398)
chr4 (279-308)||(28274889-28274918)
chr4 (357-398)||(31038871-31038912)
chr4 (333-385)||(47800623-47800676)
chr4 (333-397)||(52259631-52259696)
chr4 (333-425)||(54426043-54426136)
[»] scaffold0024 (1 HSPs)
scaffold0024 (279-357)||(27521-27600)
[»] scaffold0050 (1 HSPs)
scaffold0050 (337-433)||(58746-58843)
[»] scaffold0003 (1 HSPs)
scaffold0003 (336-393)||(306329-306387)
[»] scaffold0045 (1 HSPs)
scaffold0045 (279-355)||(84177-84254)


Alignment Details
Target: chr1 (Bit Score: 787; Significance: 0; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 787; E-Value: 0
Query Start/End: Original strand, 8 - 1028
Target Start/End: Complemental strand, 38883306 - 38882277
Alignment:
Q  8 cattccactctagccaccaacccaaacatatctggtctataccaaactcttaaaaccaaaatggtggaattcttcgccatccatcccccaaaacatcaaa 107  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38883306 cattccactctagccaccaacccaaacatacctggtctataccaaactcttaaaaccaaaatggtggagttcttcgccatccatcccccaaaacatcaaa 38883207  T
Q  108 ttcttatctcatcattttttcaaataaaagtctacacgaaataagtttccatttttatcatctaatgannnnnnnattaacttgaaccaaaagatttact 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||    
T  38883206 ttcttatctcatcattttttcaaataaaagtctacacgaaataagtttccatttatatcatctaatgatttttttattaacttgaaccaaaagatttact 38883107  T
Q  208 ttctctttctaaggccctgtttggatacacatacaccgctcacaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagataaat 307  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38883106 ttctctttctaaggccctgtttggatacacatacactactcacaagtgcttattatggtaagtgcttgtacataagctatttctatagcaaaagataaat 38883007  T
Q  308 aacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataat 407  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38883006 aacgctaaattgtctttgtataaaatataagttgttttcataagctctctagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataat 38882907  T
Q  408 ctgttttcataacttctcataaacagacagtcacacaaaatttaagtcagtcaataaactcaaataatgcaatctaaacatgcattgcattaacggactt 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  38882906 ctgttttcataacttctcataaacagacagtcacacaaaatttaagtcagtcgataagctcaaataatgcaatctaaacgtgcattgcattaacggactt 38882807  T
Q  508 gaatataaaccttttgaaaccatgattttggtttgtaaggaacacttctgaagtgaaatactattattattacatgttatcgagattctgaaagagaaaa 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  38882806 gaatataaaccttttgaaaccatgattttggtttgtaaggaacacttctgaagtgaaatattattattattacatgttatcgagattttgaaagagaaaa 38882707  T
Q  608 ttaccgtagcttctatggtatcggagtttgtagtgcctttcatcattagacggttagcaacttcaattagtccgtcatatccaagtttcttcgagtccca 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  38882706 ttaccgtagcttctatggtatcggagtttgtagtgcctttcatcattagacggttagcaacttcaattagtccgtcatatccaggtttcttcgattccca 38882607  T
Q  708 tcccacttcttgttatagtattcataatca-acaccatttctttctaaaagctataaataagttaactag-aggggc----------ttgtttggttacc 795  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||          |||||||||||||    
T  38882606 tcccacttcctgttatagtattcataatcacacgccatttctttctaaaagctataaataagttaactagaaggggcttgtttgtgtttgtttggttacc 38882507  T
Q  796 tgaaccaatttggtgcgaaacaaattgaggaataaatcatcaataacccctggcttgtattcattctttggagctgctgcaactcccacctaattcaaat 895  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38882506 tgaaccaatttggtgcgaaacaaattgaggaacaaatcatcaataacccctggcttgtattcactctttggagctgctgcaactcccacctaattcaaat 38882407  T
Q  896 tcaatcannnnnnnnnnnnnnnnnnnnnaaatttcataatcgcacacgaaaaacaatagcaaaatatgc-aaccgttttgggt-ccgacgattgaagagg 993  Q
    |||||||                     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  38882406 tcaatca----acacacacacacacacaaaatttcataatcgcacacgaaaaacaatagcaaaatatgcaaaccgttttgggtcccgacga-tgaagagg 38882312  T
Q  994 ctgaaacgcagaactgacgtatacgaattccatta 1028  Q
    |||||||||||||||||||| ||||||||||||||    
T  38882311 ctgaaacgcagaactgacgtttacgaattccatta 38882277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 279 - 397
Target Start/End: Complemental strand, 37842480 - 37842360
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||||||||||||||||| |||||| |||||| ||| |||| ||||  ||||||||||||||||||||||||| | ||||||||| |||||||    
T  37842480 ataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataa 37842381  T
Q  377 gttgaaaacaccttatgaaca 397  Q
    | |||||||  ||||||||||    
T  37842380 gctgaaaactgcttatgaaca 37842360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 287 - 419
Target Start/End: Original strand, 25479534 - 25479667
Alignment:
Q  287 tttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaa 384  Q
    |||||||| | ||||||||| |||||| ||||||||||| ||||   ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  25479534 tttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T
Q  385 caccttatgaacaatttgataatctgttttcataa 419  Q
    || || |||||| || | ||||||| |||||||||    
T  25479634 caactaatgaac-atgtcataatctattttcataa 25479667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 276 - 419
Target Start/End: Complemental strand, 24915179 - 24915034
Alignment:
Q  276 tacataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaa 373  Q
    ||||||| |||||||||||||| |||||||| ||| |||||||||| || |||||   |||||| |||||||||||||| ||| | ||||||| ||||||    
T  24915179 tacataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaa 24915080  T
Q  374 taagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||||||| | |||||||| ||| | ||||  |||||||||||    
T  24915079 taagttgaaaaaagcttatgaaaaatgtcataagttgttttcataa 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 279 - 385
Target Start/End: Original strand, 34952160 - 34952268
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||| |||| ||| |||| ||| |||||||||| |||| ||||  | ||||||||||||||||||||||  |||||||||||||||||||    
T  34952160 ataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaataa 34952259  T
Q  377 gttgaaaac 385  Q
    | |||||||    
T  34952260 gctgaaaac 34952268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 49888712 - 49888812
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||||||||||| | | |||||||||| ||| ||| |||||| |||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||    
T  49888712 ataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 49888811  T
Q  377 g 377  Q
    |    
T  49888812 g 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 285 - 406
Target Start/End: Complemental strand, 51695613 - 51695491
Alignment:
Q  285 tatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaa 382  Q
    ||||||||||| |||||||||| ||| || ||||||| |||||||||  ||| || |||||||||||||||||| | |||| ||||||||||||| ||||    
T  51695613 tatttctatagtaaaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaa 51695515  T
Q  383 aacaccttatgaacaatttgataa 406  Q
    || | |||||||||||| ||||||    
T  51695514 aatagcttatgaacaatgtgataa 51695491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 304 - 396
Target Start/End: Complemental strand, 7218173 - 7218080
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaac 396  Q
    |||||| || ||||||| ||| |||||  |||||||||||||||||| ||||| | |||||||||||||||||||||||||||| ||| |||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaac 7218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 7472257 - 7472365
Alignment:
Q  279 ataagctatttctatagcaaaagata-aataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||||| ||||||||| ||||| |||||||||| || ||||||  |||||| ||||| ||||||||||| | |||| |||||||||||||    
T  7472257 ataagctatttctataacaaaagatataataa-gttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataa 7472355  T
Q  377 gttgaaaaca 386  Q
    | ||||||||    
T  7472356 gctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 26779995 - 26779934
Alignment:
Q  333 tataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  26779995 tataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 424
Target Start/End: Complemental strand, 3887757 - 3887610
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||| ||||||||||||||| ||| ||||||||   ||| ||  |  |||||| || ||| | |||||| |||| |||||||||||||||||    
T  3887757 ataagctatttcaatagcaaaagataaaataaagttaaattaatttcttacgagctataagctgattttacaagctagctaggagaacttatgaaaataa 3887658  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    ||| |||||| |||||||||||| | ||||  ||||||||||| ||||    
T  3887657 gttaaaaacagcttatgaacaatgtcataagatgttttcataagttct 3887610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 29793729 - 29793836
Alignment:
Q  281 aagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagt 378  Q
    |||||||||||| | |||||||||| |||| ||||| |||| |||||||||  |||||||||  ||||||||||||| | |||| ||||||||| |||||    
T  29793729 aagctatttctacaacaaaagataacataaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatgaaactaagt 29793828  T
Q  379 tgaaaaca 386  Q
    ||||||||    
T  29793829 tgaaaaca 29793836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 36151630 - 36151521
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||| ||| ||||||||||| ||| || ||||||| |||||||||  ||||| |||||||| ||| | ||| ||| || |||||||||||||    
T  36151630 ataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataa 36151531  T
Q  377 gttgaaaaca 386  Q
    ||||||||||    
T  36151530 gttgaaaaca 36151521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 49938747 - 49938840
Alignment:
Q  333 tataagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||||| | ||| |||| | | | |||| |||||||||||| |||||    
T  49938747 tataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctc 49938840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 1510432 - 1510317
Alignment:
Q  281 aagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagtt 379  Q
    ||||||||| || | |||||||||||||| ||| |||||| || |||||   ||||||||||||| ||||||| |  | ||||||||| |||||||||||    
T  1510432 aagctatttttaaaacaaaagataaataatgttcaattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagtt 1510333  T
Q  380 gaaaacaccttatgaa 395  Q
    ||||| | ||||||||    
T  1510332 gaaaaaagcttatgaa 1510317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 5756811 - 5756704
Alignment:
Q  279 ataagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagcta-tctagagaacttatgaaaataa 376  Q
    |||||||||||||||| |||||||| | |||| |||||| ||| ||| |||||| |||||||||||||| |||||||  || |||| ||||  |||||||    
T  5756811 ataagctatttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagcttaccaaaataa 5756712  T
Q  377 gttgaaaa 384  Q
    ||||||||    
T  5756711 gttgaaaa 5756704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 34290236 - 34290299
Alignment:
Q  333 tataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| |||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||    
T  34290236 tataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 418
Target Start/End: Original strand, 6102154 - 6102240
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcata 418  Q
    |||||| |||||||||||||||||| | |||| ||||| ||||||| ||||||||  ||||||||||| | |||| |||||||||||    
T  6102154 tataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 6102240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 39270508 - 39270434
Alignment:
Q  320 tcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||| ||||| ||||||| ||||||||||||||| | |||||| | ||||||||||||||||||||| ||||||    
T  39270508 tcttcatataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatg 39270434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 10744301 - 10744366
Alignment:
Q  333 tataagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||||||| ||| ||||||||||| |||||||| |||||||| ||||||||||    
T  10744301 tataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaaca 10744366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 31517862 - 31517745
Alignment:
Q  282 agctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagtt 379  Q
    ||||||||||| | ||||||||||| ||| |||||||||  ||| |||||  |||||| ||| ||||||| || ||| | ||| |||||||||||||| |    
T  31517862 agctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T
Q  380 gaaaacaccttatgaaca 397  Q
    ||||||| ||||||||||    
T  31517762 gaaaacagcttatgaaca 31517745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 36070199 - 36070268
Alignment:
Q  283 gctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataag 351  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||||| ||||  |||||||||||||||||||    
T  36070199 gctatttttataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataag 36070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 425
Target Start/End: Complemental strand, 38503535 - 38503442
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||||||||  | |||||||| | |||||||||||||||||| |||||||| |||||||||||| | |||  |||||| ||||| |||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagttctc 38503442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 473135 - 473256
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataag--ctatctagagaacttatgaaaataagttgaaaacaccttatgaacaattt 401  Q
    |||||| |||||||||| ||||| ||   ||||||||||||| |||||  |||| | |||||||||||||||||||||||||| | |||||||| ||||     
T  473135 aaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctat-tggagaacttatgaaaataagttgaaaaaagcttatgaa-aattg 473232  T
Q  402 gataatctgttttcataacttctc 425  Q
     |||| || ||||||||| |||||    
T  473233 tataagcttttttcataagttctc 473256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 3234107 - 3233992
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatct 409  Q
    |||||||||| || |||||   ||||||||||||| ||||||||| | | ||||||||||||||||||| ||||| | |||||||| | | | ||||  |    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagtt 3234008  T
Q  410 gttttcataacttctc 425  Q
    |||||||||| |||||    
T  3234007 gttttcataagttctc 3233992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 7137068 - 7137005
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| |||||||||||||||||| | |||||||||||||||||| |||||| | ||||||||    
T  7137068 tataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaa 7137005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 7941615 - 7941698
Alignment:
Q  342 ttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    |||||||||||||| | | ||||||||||||||||||||||||| | |||  ||||||| | |||| |||||||||||| ||||    
T  7941615 ttttcataagctatttcggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattct 7941698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 418
Target Start/End: Original strand, 45975697 - 45975776
Alignment:
Q  340 tgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcata 418  Q
    |||||||||||||||||| | |||| ||||||||||||| |||||||| |||||||| ||| | |||  |||||||||||    
T  45975697 tgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcata 45975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 425
Target Start/End: Complemental strand, 17603483 - 17603361
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaacaatttg 402  Q
    ||||||||||||||||| || |||||   ||||||||||||| |||||||||  | |||||||| ||||||||||||| ||| |  ||||||| | | |     
T  17603483 aaataacgttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtc 17603384  T
Q  403 ataatctgttttcataacttctc 425  Q
    |||| |||||||| ||| |||||    
T  17603383 ataagctgttttcgtaagttctc 17603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 27976537 - 27976619
Alignment:
Q  276 tacataagctatttctatagcaaaagata-aataacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    |||||||||||||| ||||||||| |||  || || |||||||||| || |||||   |||||||||||||||||||||||||    
T  27976537 tacataagctatttttatagcaaatgattgaacaaagttaaattgtttttgtatatgctataagttgttttcataagctatct 27976619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 7244782 - 7244674
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||| | | ||||||||| ||| ||||| |||| |||||||||  |||| ||||||||||||||| ||| | |||||| ||||||||||     
T  7244782 ataagctatttctacaccgaaagataaaataaggttaa-ttgttttcgtataagctatacgttgttttcataagcgatcttggagaacgtatgaaaatag 7244684  T
Q  377 gttgaaaaca 386  Q
    ||| ||||||    
T  7244683 gttaaaaaca 7244674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 38189701 - 38189734
Alignment:
Q  276 tacataagctatttctatagcaaaagataaataa 309  Q
    ||||||||||||||||||||||||||||||||||    
T  38189701 tacataagctatttctatagcaaaagataaataa 38189734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 38578472 - 38578549
Alignment:
Q  279 ataagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagctat 355  Q
    |||||||||||||||| |||||||||| |||| |||||||| | || ||||||  |||||||||||| ||||| ||||    
T  38578472 ataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgtttacataaactat 38578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 40394977 - 40394904
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagttgaaaa 384  Q
    |||||||||| ||| |||||| |||||||||||||||||| |   ||| ||| |||||||||||||| ||||||    
T  40394977 gttaaattgttttcatataaattataagttgttttcataaccatcctatagagcttatgaaaataagctgaaaa 40394904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 1432460 - 1432560
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||||||||||||||| ||||||| |||||  ||| |||||| ||  |||||  ||||| |||||||||||| ||||| | |||||||||||||| |||    
T  1432460 ataagctatttctatagtaaaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaa 1432559  T
Q  377 g 377  Q
    |    
T  1432560 g 1432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 3224368 - 3224484
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    ||||||||||| |||| |||| ||| || ||| || ||||||  ||| |||||  |||| | |||||| ||||||||| |||||||||||||||||||||    
T  3224368 ataagctatttatataacaaaggatcaagtaaagtcaaattgaattcatataagctatagggtgtttttataagctattctagagaacttatgaaaataa 3224467  T
Q  377 gttgaaaacaccttatg 393  Q
    | ||| |||| ||||||    
T  3224468 gctgagaacaacttatg 3224484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 7069245 - 7069368
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacg--ttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||| ||||||||||||||||| ||    || |||||| |||||||||  |||||| || |||  |||||||||| | |||||||||||||||     
T  7069245 ataagctattactatagcaaaagataaaaaaaaaattgaattgttttcgtataagctataagctgcttttgtaagctatcttggagaacttatgaaaatg 7069344  T
Q  376 agttgaaaacaccttatgaacaat 399  Q
    | || ||||||  |||||||||||    
T  7069345 aattaaaaacaaattatgaacaat 7069368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 9656601 - 9656713
Alignment:
Q  285 tatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaa 382  Q
    |||||||||||||||| ||||| ||| |||||||| | ||| |||||  |||||| ||| |||||||||||| || ||  | ||||||||||||| | ||    
T  9656601 tatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaa 9656700  T
Q  383 aacaccttatgaa 395  Q
    |||| ||||||||    
T  9656701 aacagcttatgaa 9656713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 10199469 - 10199413
Alignment:
Q  342 ttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||| | ||||| |||||||||||||| |||||||| ||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaaca 10199413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 12564569 - 12564509
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttat 392  Q
    |||| |||||||||||||||||||| | |||||||||| ||||||| |||||||| |||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttat 12564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 278 - 395
Target Start/End: Original strand, 42174801 - 42174918
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||| ||||||| |||| ||||||||||| ||| ||||||  || || |||||   ||||||||||||| ||||| ||| | | ||||||||||||||||    
T  42174801 cataggctatttttatatcaaaagataaagtaatgttaaa--gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaata 42174898  T
Q  376 agttgaaaacaccttatgaa 395  Q
    |||| |||||| ||||||||    
T  42174899 agttaaaaacagcttatgaa 42174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 377
Target Start/End: Original strand, 13809940 - 13810043
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaa 373  Q
    |||||||| ||||||| ||||||||||| |||||| |||||||||| || |||||   ||||  ||||||| |||| ||||  |||||||||| ||||||    
T  13809940 tacataagttatttctttagcaaaagataaaataaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaa 13810039  T
Q  374 taag 377  Q
    ||||    
T  13810040 taag 13810043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 31294597 - 31294530
Alignment:
Q  327 ataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||| |||||||||||||  ||| ||||| |||||| ||||||||||||||||||||| | ||||||    
T  31294597 ataaactataagttgtttttgtaaactatcatagagagcttatgaaaataagttgaaaagagcttatg 31294530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 47498879 - 47498816
Alignment:
Q  362 aacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||||||||||| | |||||| |||||||||||| | |||| || ||||||||| |||||    
T  47498879 aacttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctc 47498816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 397
Target Start/End: Complemental strand, 14630100 - 14629971
Alignment:
Q  272 cttgtacataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaa--tataagttgttttcataagctatc-tagagaactta 367  Q
    ||||||||||| |||| |||||| ||||||||||| ||| |||| | ||| | | |||| ||  |||||| | ||||||||||||||| | ||||  |||    
T  14630100 cttgtacataaactatctctataacaaaagataaaataaagttacactgtttacatatataagctataagctattttcataagctatcttggagacttta 14630001  T
Q  368 tgaaaataagttgaaaacaccttatgaaca 397  Q
    || ||||||| |||||||| ||||||||||    
T  14630000 tggaaataagctgaaaacaacttatgaaca 14629971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 15558217 - 15558279
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatga 394  Q
    |||||| |||||||||||| |||| ||||||||||||  ||||||| |||||||| |||||||    
T  15558217 tataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatga 15558279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 399
Target Start/End: Complemental strand, 27145860 - 27145739
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaataa 376  Q
    |||||||||||||| | ||| ||||||| |||  ||||||| | |||||||||  |||||||| | ||||| |  ||||| || ||||||||||||||||    
T  27145860 ataagctatttctacaacaacagataaaataaatttaaattattttcgtataatttataagttatcttcattaaatatcttgaagaacttatgaaaataa 27145761  T
Q  377 gttgaaaacaccttatgaacaat 399  Q
    | |||||| | ||||||||||||    
T  27145760 gctgaaaa-aacttatgaacaat 27145739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 37841943 - 37842021
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc 356  Q
    |||||||||| ||||| |||| |||||| ||| |||||||||| |||||||||  |||| ||||||  |||||||||||    
T  37841943 ataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctatatgttgttcgcataagctatc 37842021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 419
Target Start/End: Complemental strand, 38018461 - 38018347
Alignment:
Q  306 ataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgat 404  Q
    |||| |||||||||| |||||||||  || ||| ||||||||||   ||||| | |||| | ||||||||||| |||||| |||| ||||||||| |  |    
T  38018461 ataaagttaaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaaaatacctaatgaacaatgtcct 38018362  T
Q  405 aatctgttttcataa 419  Q
    |||||| ||||||||    
T  38018361 aatctgctttcataa 38018347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 2777874 - 2777955
Alignment:
Q  315 aattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    ||||||||| ||||||  |||||| |||||| ||||| || || | |||||||||||||||||| |||||||  ||||||||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaa 2777955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 5592755 - 5592694
Alignment:
Q  333 tataagttgttttcataagcta-tctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||| || ||||| ||||||    
T  5592755 tataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 329 - 377
Target Start/End: Original strand, 5924051 - 5924100
Alignment:
Q  329 aaaatataagttgttttcataagctat-ctagagaacttatgaaaataag 377  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| |||||||    
T  5924051 aaaatataagttgttttcataagttatcctagagagcttatggaaataag 5924100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 9572230 - 9572141
Alignment:
Q  282 agctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatg 369  Q
    |||||||||||||||||||||| |||||| |||||||||  || ||||||  ||||||  ||||||||| || ||| | |||||||||||    
T  9572230 agctatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataagccgttttcatatgccatcattgagaacttatg 9572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 11941296 - 11941349
Alignment:
Q  366 tatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||||||||| |||||||| |||||||||||| | |||| || |||||||||    
T  11941296 tatgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataa 11941349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 23902137 - 23902076
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||||||||||||| |||||||| |||||| |||||| || |||| |||||||| ||||||    
T  23902137 tataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatg 23902076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 25006133 - 25006080
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    |||||| || ||||||| ||| |||||  |||||||||||||||||||||||||    
T  25006133 aaataaagtcaaattgttttcatataagctataagttgttttcataagctatct 25006080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 399
Target Start/End: Complemental strand, 27820461 - 27820340
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataag 377  Q
    ||||||||||| ||||| |||    |||||| | |||||||| |  ||||||  |||| | |||||| ||||||||||| | |||| |||||||||||||    
T  27820461 ataagctatttttatagtaaatataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataag 27820362  T
Q  378 ttgaaaacaccttatgaacaat 399  Q
     |||||| | ||||||||||||    
T  27820361 ctgaaaatagcttatgaacaat 27820340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 35179139 - 35179200
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||| |||||||||||| |||  | ||||||||||||||||||| |||||||| ||||||    
T  35179139 tataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatg 35179200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 35925696 - 35925776
Alignment:
Q  339 ttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||| ||||||||||| | ||||  ||||| |||||||||||||||| ||||||||| || | |||| ||||||||||||    
T  35925696 ttgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaac-atgtcataagctgttttcataa 35925776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 3e-29; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 304 - 425
Target Start/End: Original strand, 21367638 - 21367760
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttg 402  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||| |||||||| ||| |||||||| |     
T  21367638 aaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtc 21367737  T
Q  403 ataatctgttttcataacttctc 425  Q
    |||| |||||||||||| |||||    
T  21367738 ataagctgttttcataagttctc 21367760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 248 - 418
Target Start/End: Complemental strand, 402697 - 402526
Alignment:
Q  248 cacaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttca 347  Q
    ||||||||||||| ||| |||  |||| |  ||||||||||||||||| ||||||||| |||  ||||||||| |||||||||  |||||| |||||| |    
T  402697 cacaagtgcttatcatgataagggcttatgtataagctatttctatagaaaaagataattaaatttaaattgttttcgtataagttataagctgttttta 402598  T
Q  348 taagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcata 418  Q
    ||| |||||| | ||||||| ||||| |||| |||||||| |||||||||||| | |||| |||||||||||    
T  402597 taatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcata 402526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 278 - 397
Target Start/End: Complemental strand, 39602335 - 39602215
Alignment:
Q  278 cataagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagctatcta-gagaacttatgaaaata 375  Q
    |||||||||||||||||| ||||||||| |||| |||||||||| | |||||||  |||||| ||||||||||||||||||  |||||||||||||||||    
T  39602335 cataagctatttctatagaaaaagataacataaagttaaattgt-tgcgtataagttataagctgttttcataagctatctttgagaacttatgaaaata 39602237  T
Q  376 agttgaaaacaccttatgaaca 397  Q
    |||||||||||  |||||||||    
T  39602236 agttgaaaacaatttatgaaca 39602215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 44061148 - 44061032
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||  |||||  ||||||||||||||||| | |||| |||||||||||||||| |||    
T  44061148 ataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaa 44061049  T
Q  377 gttgaaaacaccttatga 394  Q
    | | |||||| |||||||    
T  44061048 gct-aaaacagcttatga 44061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 35394617 - 35394501
Alignment:
Q  284 ctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaataagttgaa 382  Q
    ||||||||||| |||||  ||||||| || |||| || ||| ||| |||||||   |||||||||||||||||| || ||| ||||||||||||||||||    
T  35394617 ctatttctataacaaaaagtaaataaagtgaaatggttttcatatcaaatatacactgttttcataagctatcttgaagaatttatgaaaataagttgaa 35394518  T
Q  383 aacaccttatgaacaat 399  Q
    |||| ||||||||||||    
T  35394517 aacagcttatgaacaat 35394501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 276 - 369
Target Start/End: Complemental strand, 30956754 - 30956659
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatg 369  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| || |||||   ||||||||||||||| |||||||| | |||||||||||    
T  30956754 tacataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 276 - 369
Target Start/End: Complemental strand, 30972566 - 30972471
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatg 369  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| || |||||   ||||||||||||||| |||||||| | |||||||||||    
T  30972566 tacataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 279 - 425
Target Start/End: Original strand, 31403303 - 31403451
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||| ||| ||||||||||| | | |||||| ||| ||||||||| ||| ||||||||||| |  ||||||| | ||||| | |||||||||    
T  31403303 ataagctatttccatatcaaaagataaaatgaagttaaaatgttttcgtataagatacaagttgttttcgttggctatcttggagaacctgtgaaaataa 31403402  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    | || ||||| |||||||||||| | |||| ||||| |||||| |||||    
T  31403403 gctgtaaacaacttatgaacaatgttataaactgttctcataagttctc 31403451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 279 - 397
Target Start/End: Complemental strand, 33883874 - 33883755
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataa 376  Q
    |||||||||||||||| || |||||||| ||| |||| | | | || |||| || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  33883874 ataagctatttctataacataagataaaataaagttacaatttttt-gtatgaactatatgttgtttacataagctatcttagagaacttatgaaaataa 33883776  T
Q  377 gttgaaaacaccttatgaaca 397  Q
    | |||||||| ||||||||||    
T  33883775 gctgaaaacaacttatgaaca 33883755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 36783457 - 36783339
Alignment:
Q  281 aagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagt 378  Q
    |||||||||||||| ||||||||||| ||| || ||||||| ||| |||||| ||| || ||||||||||||||||  | ||| | ||||||| |||||     
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattatgaatataagc 36783358  T
Q  379 tgaaaacaccttatgaaca 397  Q
    |||||||| ||||||||||    
T  36783357 tgaaaacagcttatgaaca 36783339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 36887503 - 36887569
Alignment:
Q  332 atataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||| |||||||| ||||||||||    
T  36887503 atataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaaca 36887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 395
Target Start/End: Complemental strand, 53789589 - 53789468
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaa 373  Q
    |||||||||||||||||||| ||||||| || |||  ||||| ||| || |||||   ||||||||||| |||||||||||| | ||||||||||||||     
T  53789589 tacataagctatttctataggaaaagatgaactaaaattaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaat 53789490  T
Q  374 taagttgaaaacaccttatgaa 395  Q
    |||| |||||| | ||||||||    
T  53789489 taagctgaaaaaagcttatgaa 53789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 10101601 - 10101494
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||| |||||||||| ||||||||||| ||| |||||||||| ||| ||||| ||| |||||||||||||||||  || |||||| |||||  ||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttatagaaataa 10101502  T
Q  377 gttgaaaa 384  Q
     |||||||    
T  10101501 cttgaaaa 10101494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 10212526 - 10212419
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||| |||||||||| ||||||||||| ||| |||||||||| ||| ||||| ||| |||||||||||||||||  || |||||| |||||  ||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttatagaaataa 10212427  T
Q  377 gttgaaaa 384  Q
     |||||||    
T  10212426 cttgaaaa 10212419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 25170815 - 25170874
Alignment:
Q  340 tgttttcataagctatctagagaacttatgaaaataagttgaaaacaccttatgaacaat 399  Q
    |||||||||||||||||| |||| |||||||||||||||||||| || |||||| |||||    
T  25170815 tgttttcataagctatcttgagagcttatgaaaataagttgaaatcagcttatggacaat 25170874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 26878070 - 26878184
Alignment:
Q  287 tttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaa 384  Q
    |||||||||||||||||||| ||| |||||||||| || |||  |  |||||||||||||||| |||||||| | |||| | ||||||||| | ||||||    
T  26878070 tttctatagcaaaagataaactaaggttaaattgtgtttgtacgagttataagttgttttcattagctatcttgaagaattaatgaaaatatgctgaaaa 26878169  T
Q  385 caccttatgaacaat 399  Q
    ||  |||||||||||    
T  26878170 cagtttatgaacaat 26878184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 33405287 - 33405197
Alignment:
Q  284 ctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaa 372  Q
    |||||||||||||||||| |||| ||| ||||| |||| ||| |||||  |||||| |||||||||||||||||| | |||||||||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 276 - 399
Target Start/End: Original strand, 2719411 - 2719535
Alignment:
Q  276 tacataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaa 373  Q
    |||| |||||||||||| ||||||| ||||| ||| || ||||||| || || |||  |||||  |||||||||||||||||| | ||||||||||||||    
T  2719411 tacacaagctatttctaaagcaaaatataaaataaagtgaaattgtttt-gtttaagctataaactgttttcataagctatcttggagaacttatgaaaa 2719509  T
Q  374 taagttgaaaacaccttatgaacaat 399  Q
    |||| ||| |||| |||||| |||||    
T  2719510 taagctgagaacaacttatggacaat 2719535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 425
Target Start/End: Complemental strand, 34610876 - 34610783
Alignment:
Q  333 tataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||| ||||||||||||||| |  |||||||||||||| || |||||||  |||||||||||| | |||| | |||||||||| |||||    
T  34610876 tataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctc 34610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 39980729 - 39980830
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaac 431  Q
    ||||||||||||| ||||||||| | | ||||||||||||||||||||||||| | ||||||||     | |||| |||||||||||| ||||| |||||    
T  39980729 tataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaac 39980828  T
Q  432 ag 433  Q
    ||    
T  39980829 ag 39980830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 1816554 - 1816646
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| || ||| ||| || |||||| |||||||||||||||||||||||| || |||| ||||| |||||||| |||||||| | ||||||    
T  1816554 aaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaa 1816646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 25447364 - 25447248
Alignment:
Q  284 ctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagttgaa 382  Q
    |||||||||||| |||||||||| |||  ||||||||| || ||||||  |||||  |||||||||||||||||| ||   ||||||| || ||| ||||    
T  25447364 ctatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttcataagctatcttgatttcttatgagaaaaagctgaa 25447265  T
Q  383 aacaccttatgaacaat 399  Q
    |||| ||| ||||||||    
T  25447264 aacagcttgtgaacaat 25447248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 393
Target Start/End: Complemental strand, 36646507 - 36646391
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||||||||||  ||||||||||| ||| ||  |||||| ||| |||||  ||||| ||||||||||||||||| |||||||  ||||  ||||||    
T  36646507 ataagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataa 36646408  T
Q  377 gttgaaaacaccttatg 393  Q
    | |||||||| ||||||    
T  36646407 gatgaaaacagcttatg 36646391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 1217892 - 1217809
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||| ||| | |||  |||||| ||||||||||||||||| | |||||||||||||| |||| |||||||| ||||||    
T  1217892 gttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatg 1217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 10357378 - 10357457
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    ||||| |||||||||| ||||||||||| ||| |||||||| | ||| ||||| ||| ||||||||||||||||| ||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcataagccatct 10357457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 418
Target Start/End: Original strand, 20880419 - 20880562
Alignment:
Q  276 tacataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaat 374  Q
    |||||||||||||| ||||||||| ||||||  | |||||||||| || |||||   |||||  |||||| | |||||||  | ||||||||||||||||    
T  20880419 tacataagctatttttatagcaaatgataaaacaagttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaat 20880518  T
Q  375 aagttgaaaacaccttatgaacaatttgataatctgttttcata 418  Q
    ||| | |||| | |||||||| | | | |||| |||||||||||    
T  20880519 aagctcaaaaaagcttatgaaaattgtcataagctgttttcata 20880562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 37273141 - 37273195
Alignment:
Q  340 tgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||||| | |||||||||| |||||||||||||||| ||||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatg 37273195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 5391910 - 5391965
Alignment:
Q  363 acttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||||||||||||||||||||| ||||||||| || | |||| ||||||||||||    
T  5391910 acttatgaaaataagttgaaaacagcttatgaac-atgtcataagctgttttcataa 5391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 20170470 - 20170586
Alignment:
Q  281 aagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatcta-gagaacttatgaaaataagt 378  Q
    ||||||||| ||  |||||||||||| ||| |||||||||| || |||||   ||||||||||||| | ||| ||| |  ||||||| ||||||||||||    
T  20170470 aagctatttttactgcaaaagataaaataatgttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagt 20170569  T
Q  379 tgaaaacaccttatgaa 395  Q
    |||||| | ||||||||    
T  20170570 tgaaaaaagcttatgaa 20170586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 21335620 - 21335720
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||| || ||||| |||||||||| ||| ||| | |||| || |||||   | |||| |||||||||||||||| |||||||||||||||||||||    
T  21335620 ataagctaattttatagaaaaagataaaataaagtttagttgtttttgtatattctgtaagctgttttcataagctatactagagaacttatgaaaataa 21335719  T
Q  377 g 377  Q
    |    
T  21335720 g 21335720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 22203430 - 22203474
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  22203430 tataagttgttttcataagctatcttggagaacttatgaaaataa 22203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 432
Target Start/End: Complemental strand, 30574037 - 30573885
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||||||||  |||||||||| ||| ||||| || | ||  |||||  |||| | |||||||||||||||||| | ||| || ||||| ||||    
T  30574037 ataagctatttctata--aaaagataaaataaagttaagttttttttttataatctatatgatgttttcataagctatcttggagagctgatgaacataa 30573940  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaaca 432  Q
    | |||||||| |||||||||| |   ||||| ||||||||||| |||||| |||||    
T  30573939 gctgaaaacagcttatgaaca-tgccataatttgttttcataagttctcacaaaca 30573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 38462226 - 38462342
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||||||||||| |||||||| |||||| || ||| ||| ||| ||||   |||||  |||||||||||||||| | ||| | |||||| ||||||    
T  38462226 ataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatccaagatagcttatggaaataa 38462325  T
Q  377 gttgaaaacaccttatg 393  Q
    | |||||||| ||||||    
T  38462326 gctgaaaacaacttatg 38462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 38902094 - 38902158
Alignment:
Q  360 agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    |||||| |||||||||||||||||||| | |||||||||| | |||  |||||||||||| ||||    
T  38902094 agaactcatgaaaataagttgaaaacaacgtatgaacaatgtcatatgctgttttcataaattct 38902158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 41644516 - 41644452
Alignment:
Q  332 atataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    ||||||| ||||||||||||||||| |||||| |||| | ||||||| |||||||| ||||||||    
T  41644516 atataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaa 41644452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 433
Target Start/End: Original strand, 45541516 - 45541671
Alignment:
Q  279 ataagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||| ||||||||||  |||||||||  | || |||||||| | |||||||||  ||||  || ||||||||||||||| | || ||||||||| |||||    
T  45541516 ataaactatttctattacaaaagatagcacaaggttaaattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaataa 45541615  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaacag 433  Q
      |||||||| ||||||||| || | |||| |||||||||||| ||||  |||||||    
T  45541616 cctgaaaacagcttatgaac-atgtcataagctgttttcataagttcttctaaacag 45541671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 338 - 425
Target Start/End: Complemental strand, 49465730 - 49465643
Alignment:
Q  338 gttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||||||||||||| || ||||||||||| ||||||| | |||| |||| |||||| || | |||| |||||||||||| |||||    
T  49465730 gttgttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaac-atgtaataagctgttttcataagttctc 49465643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 426
Target Start/End: Complemental strand, 25453958 - 25453835
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttg 402  Q
    |||||| || ||| ||| |||||||||  |||||  | ||||||||| ||||| | || | |||||||||||||| |||||| | ||| |||||| |||     
T  25453958 aaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacattttc 25453859  T
Q  403 ataatctgttttcataacttctca 426  Q
    |||| |||||||||||| ||||||    
T  25453858 ataagctgttttcataaattctca 25453835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 28622069 - 28622006
Alignment:
Q  333 tataagttgttttcataagctatcta-gagaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| ||||||||||| ||||||  ||||||||||||||||||  |||||||| ||||||||    
T  28622069 tataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 32095316 - 32095237
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    ||||| |||||||||| |||||||| |||| | |||||||||| || ||||||| ||||||  |||||||||| ||||||    
T  32095316 ataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatct 32095237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 36631175 - 36631076
Alignment:
Q  280 taagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataag 377  Q
    |||||||||||||||| ||| |||||| ||| |||||||||| || ||| |   ||||||||||||| || |||||| | | ||||||||||||||||||    
T  36631175 taagctatttctatagtaaaggataaagtaaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataag 36631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 46478687 - 46478752
Alignment:
Q  333 tataagttgttttcataagctatcta---gagaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    ||||||||| ||| ||||||||| ||   |||||||||||||||||||||||||| | ||||||||    
T  46478687 tataagttggttttataagctatatattggagaacttatgaaaataagttgaaaaaagcttatgaa 46478752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 3044302 - 3044264
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  3044302 gagagcttatgaaaataagttgaaaacagcttatgaaca 3044264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 10540569 - 10540519
Alignment:
Q  326 tataaaatataagttgttttcataagctatctagagaacttatgaaaataa 376  Q
    |||||| ||||||||||||||||||||||| ||||||  || |||||||||    
T  10540569 tataaactataagttgttttcataagctatttagagaggttgtgaaaataa 10540519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 14145883 - 14145957
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataag 377  Q
    |||||| |||||||||| ||||||||   |||||||| ||||||||||||||| | ||  |||||||||||||||    
T  14145883 aaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataag 14145957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 20669171 - 20669237
Alignment:
Q  332 atataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||| ||||||||||||||||| | |||| |||||| |||||||  ||||||| ||||||||||    
T  20669171 atataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaaca 20669237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 25925769 - 25925807
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  25925769 gagagcttatgaaaataagttgaaaacagcttatgaaca 25925807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 34638090 - 34638037
Alignment:
Q  279 ataagctatttctatagcaaaagataaa--taacgttaaattgtcttcgtataa 330  Q
    ||||||||||||||||| ||||||||||  ||| |||||||||| |||||||||    
T  34638090 ataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtataa 34638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 384
Target Start/End: Original strand, 37689176 - 37689282
Alignment:
Q  277 acataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataag-ctatctagagaacttatgaaaat 374  Q
    ||||||||||||||||||||||||||| |||||| |  ||||||| || |||||   |||| |||||||| || ||  |||| |||| ||||||||||||    
T  37689176 acataagctatttctatagcaaaagataaaataaag--aaattgtttttgtatatgctataggttgtttttatgagtatatc-agagcacttatgaaaat 37689272  T
Q  375 aagttgaaaa 384  Q
    ||||||||||    
T  37689273 aagttgaaaa 37689282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 47319350 - 47319276
Alignment:
Q  324 cgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||| |||||| |||| |||||| |||||| ||||| ||||||||||||||| |||| || ||||| ||||    
T  47319350 cgtataaactataagctgttgtcataatctatcttagagagcttatgaaaataagtagaaatcaacttattaaca 47319276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 901930 - 902011
Alignment:
Q  339 ttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||| ||||||||| | | ||||||||||||||||||||||||| | |||||| | ||| | || | ||||||||||||    
T  901930 ttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataa 902011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 15304472 - 15304419
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaa 331  Q
    |||||||||||||||| |||||||| |||||| |||||||||| ||| ||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataaa 15304419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 18405901 - 18405856
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataag 377  Q
    |||||||||||||||||||||||| | |||||||||||||| ||||    
T  18405901 tataagttgttttcataagctatcttggagaacttatgaaattaag 18405856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 22214729 - 22214668
Alignment:
Q  333 tataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||||||||||||||||||||| |||||||  ||| | ||||||| |||||||| ||||||    
T  22214729 tataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatg 22214668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 425
Target Start/End: Complemental strand, 24085408 - 24085315
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||| |||||||  |||||||||| | ||||||| |||||||||| |||||||| | |||||||| |   |||| |||||||||||| |||||    
T  24085408 tataatttgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctc 24085315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 24887408 - 24887299
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||||||||||| ||| |||| |||||| || ||| ||| ||| |||||  || ||| |||||||||||||||| || |||| ||||||  |||||    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataa 24887309  T
Q  377 gttgaaaaca 386  Q
    | ||||||||    
T  24887308 gctgaaaaca 24887299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 26990558 - 26990509
Alignment:
Q  336 aagttgttttcataagctatctag-agaacttatgaaaataagttgaaaa 384  Q
    ||||||||||| |||||||||| | |||||||||||||||||| ||||||    
T  26990558 aagttgttttcctaagctatctcggagaacttatgaaaataagctgaaaa 26990509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 386
Target Start/End: Complemental strand, 34924599 - 34924554
Alignment:
Q  342 ttttcataagctatct-agagaacttatgaaaataagttgaaaaca 386  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||    
T  34924599 ttttcataagctatcttagagagcttatgaaaataagctgaaaaca 34924554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 35959583 - 35959474
Alignment:
Q  277 acataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaat 374  Q
    ||||||||||||||||||| ||| ||| |||||| |||||||| | || |||||   | ||||||||||  |||||||||  ||||||| || |||||||    
T  35959583 acataagctatttctatagaaaaggataaaataaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaat 35959484  T
Q  375 aagttgaaaa 384  Q
    ||| ||||||    
T  35959483 aagctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 40665429 - 40665494
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||||| |||| | |||| ||||| |||||||| |||||||| ||||||||||    
T  40665429 tataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaaca 40665494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 52440704 - 52440667
Alignment:
Q  360 agaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  52440704 agaacttatgaaaattagttgaaaacaacttatgaaca 52440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 2e-27; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 292 - 425
Target Start/End: Original strand, 39967878 - 39968013
Alignment:
Q  292 atagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacacct 389  Q
    ||||||||||||||| |||  ||||||||| ||||||  |  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||    
T  39967878 atagcaaaagataaaataaacttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagct 39967977  T
Q  390 tatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||   |||| |||||||||||| |||||    
T  39967978 tatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 278 - 425
Target Start/End: Original strand, 48469988 - 48470137
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    ||||||||||||||| ||||||||||||| | | |||||||||| || ||||| ||||||||||||||||||||||||| | | | |||||||||| |||    
T  48469988 cataagctatttctacagcaaaagataaaattaagttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacata 48470087  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    || | |||| | |||||||| |||   |||| |||||||||||| |||||    
T  48470088 agctcaaaaaagcttatgaaaaatgccataagctgttttcataagttctc 48470137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 279 - 425
Target Start/End: Original strand, 33678725 - 33678873
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||| || | ||||||||||||||| ||| ||||||| || || ||| ||  |||||| |||||||||||||||||| | | ||||| |||||||||    
T  33678725 ataagctcttcccatagcaaaagataaagtaaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataa 33678824  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||||| || ||||||||| | ||||  ||||||||||| |||||    
T  33678825 gttgaaaacatctcatgaacaatgttataagttgttttcataagttctc 33678873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 278 - 425
Target Start/End: Complemental strand, 19302685 - 19302540
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataa 376  Q
    |||||||||||| || |||| |||||| | |||||||||||||| || |||||   ||||||||||||| |||||||||    |||||||||||||||||    
T  19302685 cataagctatttttacagcagaagatatagtaacgttaaattgtttttgtatatgttataagttgtttttataagctata---agaacttatgaaaataa 19302589  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||| |  ||||||| | | | |||| |||||||||||| |||||    
T  19302588 gttgaaaaaagtttatgaaaattgtcataagctgttttcataaattctc 19302540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 40689107 - 40688993
Alignment:
Q  283 gctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttg 380  Q
    ||||||||||||||||||||| |||||| |||||||| | ||| |||||  |||||| ||| |||||||||||| || || |||||||||||||||| |     
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctc 40689008  T
Q  381 aaaacaccttatgaa 395  Q
    |||||| ||||||||    
T  40689007 aaaacagcttatgaa 40688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 44821930 - 44822019
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttat 392  Q
    |||||| || ||||||| || ||||||  |||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 34035923 - 34036009
Alignment:
Q  339 ttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||| | ||||  | ||||||||| ||||    
T  34035923 ttgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttct 34036009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 384
Target Start/End: Original strand, 420304 - 420412
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||| | |||||||||||||||| ||| ||| |||||| || |||||   |||||||||||| | |||||||| | | ||||||||||||||||    
T  420304 cataagctatgtttatagcaaaagataaaataatgttcaattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaata 420403  T
Q  376 agttgaaaa 384  Q
    |||||||||    
T  420404 agttgaaaa 420412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 2825308 - 2825236
Alignment:
Q  326 tataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||| ||||||| |||||| | ||||||||||    
T  2825308 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 2825236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 425
Target Start/End: Original strand, 20526403 - 20526539
Alignment:
Q  291 tatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacacc 388  Q
    |||||||||||||||| ||| |||||||| | || ||| |   |||||| |||||||||||||||| | | |||||| ||||||||||| | |||||| |    
T  20526403 tatagcaaaagataaaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagc 20526502  T
Q  389 ttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||| ||| ||| |||||| |||||||||||| |||||    
T  20526503 ttacgaaaaatgtgataaactgttttcataagttctc 20526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 20881758 - 20881654
Alignment:
Q  282 agctatttctatagcaaaagataaata-acgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagtt 379  Q
    |||||| ||||||||||||||||||   | |||||||||| | |||| ||  |||||||||||||||||| ||||| || |||||||||||||||||| |    
T  20881758 agctatatctatagcaaaagataaaacgaagttaaattgtttccgtacaagctataagttgttttcataaactatcttaaagaacttatgaaaataagct 20881659  T
Q  380 gaaaa 384  Q
    |||||    
T  20881658 gaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 425
Target Start/End: Original strand, 17248499 - 17248645
Alignment:
Q  280 taagctatttctatagcaaaagataaataac---gttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataa 376  Q
    ||||||||||||| | ||||||||||| ||    |||||||||| || ||||||  |||||| | |||||||||| | | ||||||||||||||||||||    
T  17248499 taagctatttctagatcaaaagataaaaaaaaaagttaaattgtttttgtataagctataagctcttttcataagatct-tagagaacttatgaaaataa 17248597  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    | | ||| || |||||||||||| | |||| ||||||| |||| |||||    
T  17248598 ggt-aaatcagcttatgaacaatgttataagctgtttttataagttctc 17248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 38138604 - 38138486
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaataa 376  Q
    ||||||||||| ||||| | |||||||| |||||||| ||||  || |||||   ||||||||||||| || |||||| | || ||||||||||||||||    
T  38138604 ataagctatttttatagtataagataaagtaacgttacattgattttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataa 38138505  T
Q  377 gttgaaaacaccttatgaa 395  Q
    |||||||| | ||||||||    
T  38138504 gttgaaaaaagcttatgaa 38138486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 39907774 - 39907868
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||| || ||||||  |||||  ||||||||||| |||||| |||||||| ||||||||||| |||||||| || |||||||    
T  39907774 aaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaaca 39907868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 40530479 - 40530425
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaaca 386  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  40530479 tataagttgttttaataagctatcctaaagaacttatgaaaataagttgaaaaca 40530425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 425
Target Start/End: Complemental strand, 19022655 - 19022562
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||| ||||||||| | | ||||||||||||||||||||||| ||| |||||||| | | | ||||  ||||||||||| |||||    
T  19022655 tataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctc 19022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 47130855 - 47130802
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaac 385  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  47130855 tataagttgttttcataagctatcttggagaacttgtgaaaataagttgaaaac 47130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 397
Target Start/End: Original strand, 38010695 - 38010779
Alignment:
Q  314 aaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||| ||| |||||  |||||| ||||||||||| ||||| ||||||||||||| ||||||| | |||||| ||||||||||    
T  38010695 aaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaaca 38010779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 376
Target Start/End: Original strand, 12110305 - 12110404
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||| ||||||||||  || |||||||| ||| || ||||||| || ||||||  |||||| |||||||||||||||||| | |||||||||||||||||    
T  12110305 ataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 15740593 - 15740534
Alignment:
Q  365 ttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    ||||||||||||||||||||||||||||| |||  || |||| |||||||||||| ||||    
T  15740593 ttatgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataagttct 15740534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 424
Target Start/End: Original strand, 43648229 - 43648332
Alignment:
Q  322 ttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataac 420  Q
    ||||||||  ||||||| ||||||||||||||||| | |||||  ||||||||||||||||||| | ||||||||  || | | ||| |||||||||||     
T  43648229 ttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaagaacttatgaagtatgtcagaatatgttttcataag 43648328  T
Q  421 ttct 424  Q
    ||||    
T  43648329 ttct 43648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 280 - 384
Target Start/End: Original strand, 48507667 - 48507775
Alignment:
Q  280 taagctatttctatagcaaaagata--aataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc--tagagaacttatgaaaata 375  Q
    |||||| ||||||||||||||||||  ||| | |||||||||| || |||||   |||||  ||||||||||||| |||  |||||||||||||||| ||    
T  48507667 taagctgtttctatagcaaaagataagaatgaagttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaatta 48507766  T
Q  376 agttgaaaa 384  Q
    || ||||||    
T  48507767 agctgaaaa 48507775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 529382 - 529439
Alignment:
Q  340 tgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaac 396  Q
    |||||||||||||||||| | ||| |||||||||||| |||||||||| |||||||||    
T  529382 tgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaac 529439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 22283862 - 22283754
Alignment:
Q  285 tatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataagttgaa 382  Q
    ||||||||||||||| |||||| ||| |||||||||| || |||| |  |||||  ||||||||||| | |||| |||||||||||| ||||||| ||||    
T  22283862 tatttctatagcaaa-gataaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaa 22283764  T
Q  383 aacaccttat 392  Q
    |||| |||||    
T  22283763 aacagcttat 22283754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 425
Target Start/End: Complemental strand, 33601479 - 33601387
Alignment:
Q  333 tataagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||| ||||||||||| ||||||||||||||  |||| |||||| | |||||||| | | | |||| |||||||||||| |||||    
T  33601479 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 33601387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 276 - 376
Target Start/End: Complemental strand, 4970916 - 4970819
Alignment:
Q  276 tacataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaat 374  Q
    |||||||||||||||||||||||||||||||     | ||||||| || |||||   |||||||| |||| ||||| |||  ||||||||||||||||||    
T  4970916 tacataagctatttctatagcaaaagataaa----ataaaattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaaaat 4970821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 5569726 - 5569658
Alignment:
Q  313 taaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttg 380  Q
    |||||||| || ||||||  ||||||||||||||||||| ||||| | |||||| ||||||||||||||    
T  5569726 taaattgttttggtataagttataagttgttttcataagttatcttgaagaactaatgaaaataagttg 5569658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 395
Target Start/End: Original strand, 5947156 - 5947247
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| |||||| ||| || ||||||  |||||| ||| |||||||||||||||| |||| ||||||||||||| |||||| | ||||||||    
T  5947156 aaataaagttaaactgtatttgtataac-tataagctgtattcataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaa 5947247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 270 - 353
Target Start/End: Complemental strand, 9527224 - 9527140
Alignment:
Q  270 tgcttgtacataagctatttctatagcaaaagata-aataacgttaaattgtcttcgtataaaatataagttgttttcataagct 353  Q
    ||||| || ||| ||||| |||||| ||||||||| ||||| || ||| ||| ||| |||||| |||||||||||||||||||||    
T  9527224 tgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 30456572 - 30456476
Alignment:
Q  282 agctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||||||||| | |||||||| |||||| || ||||||| ||| |||||  ||||||| |||||||||| ||||| | |||| |||||||||||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 39393647 - 39393603
Alignment:
Q  333 tataagttgttttcataagctatctagagaacttatgaaaataag 377  Q
    |||||||| |||||||||||||| | |||||||||||||||||||    
T  39393647 tataagtttttttcataagctatttggagaacttatgaaaataag 39393603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 377
Target Start/End: Complemental strand, 33552914 - 33552875
Alignment:
Q  339 ttgttttcataagctatct-agagaacttatgaaaataag 377  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  33552914 ttgttttcataagctatcttagagaacttatgaaaataag 33552875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 351
Target Start/End: Complemental strand, 34083644 - 34083577
Alignment:
Q  285 tatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataag 351  Q
    ||||||||||||||||||| |||||| |||||||||| |  ||||||  |||||| ||||||||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 45806452 - 45806409
Alignment:
Q  278 cataagctatttctatagcaaaagat-aaataacgttaaattgt 320  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  45806452 cataagctatttttatagcaaaagataaaataacgttaaattgt 45806409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 20526992 - 20526914
Alignment:
Q  340 tgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcat 417  Q
    ||||||||||||||||   | |||||||||||||||||| |||||| | ||||| |||||| | |||| ||||||||||    
T  20526992 tgttttcataagctatagtgtagaacttatgaaaataagctgaaaagatcttataaacaatctcataagctgttttcat 20526914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 25596042 - 25596092
Alignment:
Q  342 ttttcataagctatctag-agaacttatgaaaataagttgaaaacacctta 391  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||| ||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaacaactta 25596092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 24363671 - 24363610
Alignment:
Q  333 tataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||||||||||||||||||||| || ||||  ||||| ||||||| |||||||| ||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatg 24363610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Complemental strand, 28613659 - 28613582
Alignment:
Q  279 ataagctatttctatagcaaaagataaat-aacgttaaattgtcttcgtataaaatataagttgttttcataagctat 355  Q
    ||||||||||| |||| |||||||||||  || |||||||||| || ||||||  ||||||||||| || ||||||||    
T  28613659 ataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttgttgtcgtaagctat 28613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 30180002 - 30180063
Alignment:
Q  285 tatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgtttt 345  Q
    |||||| |||||||||||| |||||| |||||||||| |||||||||  |||||| ||||||    
T  30180002 tatttcgatagcaaaagataaaataaagttaaattgttttcgtataagctataagctgtttt 30180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 35266844 - 35266921
Alignment:
Q  279 ataagctatttctatagcaaaaga-taaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat 355  Q
    |||||||||||||||| |||| || ||||||| |||||||| | ||| |||||| |||||  ||||||||| ||||||    
T  35266844 ataagctatttctataacaaatgattaaataaagttaaatttttttcatataaattataaaatgttttcatgagctat 35266921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 44151550 - 44151489
Alignment:
Q  333 tataagttgttttcataagctatctagagaa-cttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||||| |||||| || || |||||| ||||||| |||||||| ||||||    
T  44151550 tataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatg 44151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 45813305 - 45813236
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttca 347  Q
    |||||||||||||||| |||||||| |||||| || || |||| ||| |||||  |||||||||||||||    
T  45813305 ataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 48917414 - 48917361
Alignment:
Q  335 taagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacac 387  Q
    |||||||||||||||||||||| | |||| |||||||||||||| || ||||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataagctggaaacac 48917361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 2e-27; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 248 - 413
Target Start/End: Complemental strand, 9202904 - 9202737
Alignment:
Q  248 cacaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttc 346  Q
    |||||||| |||| ||| ||| ||||| || ||||||||||||| ||||||||||| |||||| |||||||||| ||| |||||   ||||| |||||||    
T  9202904 cacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttc 9202805  T
Q  347 ataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttt 413  Q
    ||||| ||||| | |||||||||||||||||| || ||||| |||||||||||| | |||| ||||||    
T  9202804 ataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgttt 9202737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 279 - 425
Target Start/End: Original strand, 39105409 - 39105557
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||||||||| ||| || |||| | |||||||||| |||||||||  |||||  |||||||||||||||||| | |||||||||||||||||    
T  39105409 ataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataa 39105508  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    | | |||| | |||||||||||| | |||| |||||||||||| |||||    
T  39105509 gctaaaaatagcttatgaacaatgtcataagctgttttcataaattctc 39105557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 249 - 392
Target Start/End: Original strand, 12425486 - 12425631
Alignment:
Q  249 acaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttca 347  Q
    ||||||| |||| ||| |||| |||| |  |||| |||||| ||||| |||||||||| ||| |||||||||| |||||||||  |||||| ||||||||    
T  12425486 acaagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttca 12425585  T
Q  348 taagctatctag-agaacttatgaaaataagttgaaaacaccttat 392  Q
     ||||||||| | ||||||||||||||||||||||||||| |||||    
T  12425586 caagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 279 - 397
Target Start/End: Complemental strand, 4014549 - 4014429
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||||||||||||||||||| ||| |||| ||||| || | | |||  ||||| |||||||||||||||||| | |||||||||||||||||    
T  4014549 ataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatcttggagaacttatgaaaataa 4014450  T
Q  377 gttgaaaacaccttatgaaca 397  Q
    | |||||||| ||||||||||    
T  4014449 gctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 278 - 425
Target Start/End: Original strand, 29925785 - 29925934
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||||| |||||||||||||||| || ||||||||||| |  ||||    |||||||||||| |||||||||| | | ||||||||||||||||    
T  29925785 cataagctatttttatagcaaaagataaaatagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaata 29925884  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||| | |  ||||||| | | |||| |||||||||||| |||||    
T  29925885 agttgaaaaaaacacatgaacattgtcataagctgttttcataagttctc 29925934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 279 - 397
Target Start/End: Original strand, 7674593 - 7674713
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||||| |||||||| ||||||  ||||||||| ||| |||||   ||||  ||||||||||||||||| | ||||| || |||||||||    
T  7674593 ataagctatttctataccaaaagataaaataaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataa 7674692  T
Q  377 gttgaaaacaccttatgaaca 397  Q
    | |||||||||||||| ||||    
T  7674693 gctgaaaacaccttataaaca 7674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 278 - 381
Target Start/End: Complemental strand, 25461772 - 25461668
Alignment:
Q  278 cataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||||||| |||||||||||||||||| ||||||||||  || |||||   ||||||||||||| ||||||| |  | |||||||||| |||||||    
T  25461772 cataagctatttttatagcaaaagataaatatcgttaaattggtttagtatatgttataagttgtttttataagctctattggagaacttattaaaataa 25461673  T
Q  377 gttga 381  Q
    |||||    
T  25461672 gttga 25461668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 14182451 - 14182386
Alignment:
Q  332 atataagttgttttcataagctatctagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||  |||||||||    
T  14182451 atataagctgttttcataagttatcctgagaacttatgaaaataagttgaaaacaatttatgaaca 14182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 391
Target Start/End: Original strand, 39594751 - 39594866
Alignment:
Q  277 acataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaat 374  Q
    ||||||||||||||||||| ||||||| |||||| | |||||||| |||| ||||  | |||| |||||||||||| ||||| |  ||||||||||||||    
T  39594751 acataagctatttctatagaaaaagataaaataaag-taaattgttttcgcataagttgtaagctgttttcataagatatcttgttgaacttatgaaaat 39594849  T
Q  375 aagttgaaaacacctta 391  Q
    ||| |||||||| ||||    
T  39594850 aagctgaaaacaactta 39594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 377
Target Start/End: Complemental strand, 12460125 - 12460026
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataag 377  Q
    |||||||||||||||| |||||||||||  | |||| ||||| |||  ||||| |||||||||| |||| ||||||||| | ||| ||||||||||||||    
T  12460125 ataagctatttctataacaaaagataaaataagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataag 12460026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 41957543 - 41957460
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||| ||| | |||  |||||| ||||||||||||||||| | ||||||||||||||||||| |||||||| ||||||    
T  41957543 gttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatg 41957460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 396
Target Start/End: Complemental strand, 6587195 - 6587113
Alignment:
Q  315 aattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaac 396  Q
    |||||| |||||||||  |||||||||||||||||||||||  | |||||||| |||||||||| || ||||| |||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaac 6587113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 278 - 425
Target Start/End: Complemental strand, 16458104 - 16457956
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagct-atctagagaacttatgaaaata 375  Q
    |||||||||||| |||||||||||||||| |||| ||||||||| || |||||   ||||||||||||| || |||| |  | |||||||| ||||||||    
T  16458104 cataagctatttttatagcaaaagataaaataac-ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaata 16458006  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |  |||||| | |||||||| | | | |||| |||||||||||| |||||    
T  16458005 aactgaaaagagcttatgaaaactgtcataagctgttttcataagttctc 16457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 280 - 384
Target Start/End: Original strand, 25461038 - 25461143
Alignment:
Q  280 taagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagt 378  Q
    |||||||||| | ||||||||||||||||| |||  ||||| || |||||   ||||||||||||||||||||| |  | ||||||| |||||||||||     
T  25461038 taagctatttttctagcaaaagataaataaagttgtattgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagc 25461137  T
Q  379 tgaaaa 384  Q
    ||||||    
T  25461138 tgaaaa 25461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 425
Target Start/End: Complemental strand, 1465144 - 1464997
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||||||||||| | |||||| ||| ||||||| |  || || |||  |||||||| |||| ||||||||||| | || |||| |||||||||    
T  1465144 ataagctatttctatagcataggataaaataaagttaaatcgcttttgtgtaagctataagttatttt-ataagctatcttggaggacttgtgaaaataa 1465046  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    | |||||||| ||||||| ||||   |||| |||||||||||| |||||    
T  1465045 gctgaaaacaacttatgagcaatgccataagctgttttcataagttctc 1464997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 425
Target Start/End: Original strand, 10639898 - 10640046
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||||||||||||||||||| | |  ||||||||| || |||||    || |||||||| ||||| |||| | | |||||||||||||||||    
T  10639898 ataagctatttctatagcaaaagataaaattaaattaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaataa 10639997  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    | |  ||| | |||||||| ||| | |||| |||||||||||| |||||    
T  10639998 gctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctc 10640046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 4625756 - 4625815
Alignment:
Q  360 agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||| |||||||||||||||||||   |||||||||||| |||| ||||||||||||    
T  4625756 agaacttttgaaaataagttgaaaacaatgtatgaacaatttcataagctgttttcataa 4625815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 14675023 - 14674916
Alignment:
Q  281 aagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaa-atataagttgttttcataagctat-ctagagaacttatgaaaataagt 378  Q
    |||||||||||||| |||  ||||||||| |||||||||  | ||||||||  ||||||||||| ||||||| ||| ||  |||||||||||||||| ||    
T  14675023 aagctatttctataacaagtgataaataaagttaaattgattccgtataaagctataagttgttctcataagatatcctgtagaacttatgaaaatatgt 14674924  T
Q  379 tgaaaaca 386  Q
    | ||||||    
T  14674923 ttaaaaca 14674916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 276 - 399
Target Start/End: Complemental strand, 7319139 - 7319011
Alignment:
Q  276 tacataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataa---aatataagttgttttcataagctatctag-agaacttatga 370  Q
    |||||||||||||||||  |||||| ||||| ||| || ||||||| ||||  |||   | |||||  |||||||||||||||||| | |||||||||||    
T  7319139 tacataagctatttctaacgcaaaatataaaataaagtgaaattgttttcgcttaagctattataaactgttttcataagctatcttggagaacttatga 7319040  T
Q  371 aaataagttgaaaacaccttatgaacaat 399  Q
    ||||||| ||| |||| |||||| |||||    
T  7319039 aaataagctgagaacaacttatggacaat 7319011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 333 - 398
Target Start/End: Original strand, 7984969 - 7985035
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    |||||| | |||||||||||||||| | |||| ||||||||||||| |||||||| |||||||||||    
T  7984969 tataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaa 7985035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 10272520 - 10272442
Alignment:
Q  314 aaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacacctta 391  Q
    ||||||| |||||||||  |||||||||||||||||||| ||| | ||||  ||||||||||||| |||||||| ||||    
T  10272520 aaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 280 - 391
Target Start/End: Original strand, 10363696 - 10363810
Alignment:
Q  280 taagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataag-ttgttttcataagctatct-agagaacttatgaaaataa 376  Q
    ||||||||||||||| |||||||| |||||| |||||||||| ||| | | ||  ||||| |  ||||||||| |||||| ||||||||| |||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgttttcatgttaacaataagctatttttcataaactatctcagagaacttgtgaaaataa 10363795  T
Q  377 gttgaaaacacctta 391  Q
    | |||||||| ||||    
T  10363796 gctgaaaacagctta 10363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 32703346 - 32703292
Alignment:
Q  333 tataagttgttttcataagctatcta-gagaacttatgaaaataagttgaaaaca 386  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||    
T  32703346 tataagttgttttcataagctatctaggagaatttataaaaataagctgaaaaca 32703292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 36227745 - 36227835
Alignment:
Q  284 ctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaa 372  Q
    |||||| |||||||||||||||| || ||||||||||  || ||||| ||||||||||| ||| ||||||||| | | |||||||||||||    
T  36227745 ctatttttatagcaaaagataaaatagcgttaaattgattttgtatacaatataagttgcttttataagctatattgaagaacttatgaaa 36227835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 433
Target Start/End: Original strand, 2568602 - 2568758
Alignment:
Q  279 ataagctatttctatagcaaaagataaat-aacgttaaattgtctt-cgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaata 375  Q
    |||| ||||||||||| ||| | |||||  || |||||||||| || |||||||  |||||||||||||||||||||||| | |||| || |||||||||    
T  2568602 ataaactatttctataacaagatataaaacaaagttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaata 2568701  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaacag 433  Q
    || | |||| | ||||||||  || | |||| |||||||||||| ||||  |||||||    
T  2568702 agctaaaaataacttatgaa-tatgtcataagctgttttcataagttcttctaaacag 2568758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 397
Target Start/End: Complemental strand, 10125844 - 10125723
Alignment:
Q  279 ataagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatat-aagttgttttcataagctatc-tagagaacttatgaaaata 375  Q
    |||||||||||||||| || ||||||| |||| ||| ||||   ||| |||||| ||| ||||| |||||||||| || | | |||| ||||||||||||    
T  10125844 ataagctatttctatatcacaagataagataaagttgaattcctttcttataaactattaagttattttcataagttaccatggagagcttatgaaaata 10125745  T
Q  376 agttgaaaacaccttatgaaca 397  Q
    || |||||||||||||| ||||    
T  10125744 agctgaaaacaccttatcaaca 10125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 15309063 - 15308998
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||| ||||||||  |||||||||    
T  15309063 tataagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaaca 15308998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 16937982 - 16937861
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaacaatttg 402  Q
    ||||||||||||||||| || |||||   ||||||||||||| ||| |||||  | ||||||||| ||||||||| |||||| | ||||||||   | |     
T  16937982 aaataacgttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtc 16937883  T
Q  403 ataatctgttttcataacttct 424  Q
    |||| |||||||||||| ||||    
T  16937882 ataagctgttttcataagttct 16937861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 42583094 - 42583203
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||| |||||||||| |||||||| |||||| |||||||||| ||||| |||   ||||| |||||||||||  |||| | |||||||||||||  |||    
T  42583094 ataaggtatttctataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaatgtaa 42583193  T
Q  377 gttgaaaaca 386  Q
    | ||||||||    
T  42583194 gctgaaaaca 42583203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 424
Target Start/End: Original strand, 11700107 - 11700254
Alignment:
Q  279 ataagctatttctatagcaaaagataaat-aacgttaaattgtcttcgtataaaat-ataagttgttttcataagctatc-tagagaacttatgaaaata 375  Q
    ||||||||||||||||  |||| |||||| || ||||  |||| |||||||||  | |||||||||||| ||| |||||| | |||||||||||||||||    
T  11700107 ataagctatttctatataaaaaaataaattaaagttatgttgttttcgtataagcttataagttgttttgatatgctatcgtggagaacttatgaaaata 11700206  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    || || |||||  ||||||||||| | ||||  ||||| ||||| ||||    
T  11700207 agatg-aaacaatttatgaacaatgtcataagttgtttccataagttct 11700254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 37954689 - 37954773
Alignment:
Q  336 aagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||||||| ||||||||| | | ||||| ||||||||||||||||||| | || ||||| | ||| |||| ||||||||||||    
T  37954689 aagttgtttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataa 37954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 40848772 - 40848820
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaacaatttgataat 407  Q
    |||||||||||||||||||  ||||||| |||||||||||| |||||||    
T  40848772 gagaacttatgaaaataaggcgaaaacaacttatgaacaatgtgataat 40848820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 397
Target Start/End: Original strand, 42582857 - 42582977
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||| ||   ||||||| |||||| |||||||||| ||||| |||  |||||| ||||||  |||||||| | | |||||||||||||||||    
T  42582857 ataagctatttccatgataaaagatgaaataaagttaaattgtgttcgtttaaggtataagctgtttttgtaagctatattggagaacttatgaaaataa 42582956  T
Q  377 gttgaaaacaccttatgaaca 397  Q
    | | ||||||  |||||||||    
T  42582957 gctcaaaacagtttatgaaca 42582977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 43215324 - 43215364
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattg 319  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  43215324 ataagctatttctataacaaaagataaataaagttaaattg 43215364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 1619037 - 1619143
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagt 378  Q
    |||||||||||||| | ||||| |||| ||| |||||||| | | |||||||  |||||| ||||||||||||| || | |||| | ||||||||| ||     
T  1619037 ataagctatttctaaaacaaaaaataa-taaagttaaattctttccgtataagctataagctgttttcataagccatttggagagcatatgaaaatcagc 1619135  T
Q  379 tgaaaaca 386  Q
    ||||||||    
T  1619136 tgaaaaca 1619143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 12595857 - 12595750
Alignment:
Q  287 tttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaa 384  Q
    |||||||| ||||||||||| ||| |||||||||| ||| |||||| ||| || || |||||||||||| | || ||| |||||  |||| |||||||||    
T  12595857 tttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttatagaaatcagttgaaaa 12595758  T
Q  385 caccttat 392  Q
    || |||||    
T  12595757 cagcttat 12595750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 33533609 - 33533546
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| |||||||| ||||||||| | ||| |||||| |||||||||||||||| ||||||||    
T  33533609 tataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 33533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 34736652 - 34736573
Alignment:
Q  278 cataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    ||||||||||||||||||||||||| |||||| | |||||| | || ||||||  |||||  |||| |||| ||||||||    
T  34736652 cataagctatttctatagcaaaagagaaataaagctaaattatttttgtataagctataaactgttatcattagctatct 34736573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 42100338 - 42100426
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaacagacagtcacacaaaattta 451  Q
    ||||||||||||||||||| |||||||||||| ||||| || | |||| || |||||| || |||||     || ||||||||||||||||||    
T  42100338 gagaacttatgaaaataagatgaaaacaccttttgaactatgtcataagctattttcacaagttctc----tcacacagtcacacaaaattta 42100426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 10296414 - 10296465
Alignment:
Q  333 tataagttgttttcataagctatctagagaacttatgaaaataagttgaaaaca 386  Q
    ||||||| |||||||||||||  || |||| |||||||||||||||||||||||    
T  10296414 tataagtggttttcataagct--ctggagagcttatgaaaataagttgaaaaca 10296465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 12595585 - 12595503
Alignment:
Q  270 tgcttgtacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataag 351  Q
    |||||||  ||||||||||||||||||||||||| ||||||  | |||| || |||||||||| |||||| || ||| |||||    
T  12595585 tgcttgtgtataagctatttctatagcaaaagataaaataaattcaaatagttttcgtataaattataagctgattttataag 12595503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 13604926 - 13604833
Alignment:
Q  326 tataaaatataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||| | |||| |||||||||||| ||||| || || ||||||||||||||||||||||| | |||| || || | |||| ||||||||||||    
T  13604926 tataaactttaagctgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggac-atgtcataagctgttttcataa 13604833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 32059426 - 32059364
Alignment:
Q  336 aagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||| ||||||||||||||| ||||||||||||  ||||||| |||||||| || |||||||    
T  32059426 aagttcttttcataagctatcctagagaacttatcgaaataagctgaaaacaactcatgaaca 32059364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 2880617 - 2880552
Alignment:
Q  333 tataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||||||||| |||||||||  ||| ||  ||||| ||||||| |||||||||||||||||||    
T  2880617 tataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaaca 2880552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 11707055 - 11707120
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||||||||||| | ||| ||| |||||||||| |||||||| ||||| ||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaaca 11707120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 13697878 - 13697766
Alignment:
Q  285 tatttctatagcaaaagataaa-taacgttaaattgtcttcgt-ataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttga 381  Q
    ||||| |||||||||||||||| ||| |||||||| | ||  | ||| | ||||||||||||| ||||||||| | | |||| |||||||||||||||||    
T  13697878 tatttttatagcaaaagataaaataatgttaaatttttttttttatatattataagttgtttt-ataagctatgttggagaagttatgaaaataagttga 13697780  T
Q  382 aaacaccttatgaa 395  Q
    ||| | ||||||||    
T  13697779 aaaaaacttatgaa 13697766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 18543273 - 18543213
Alignment:
Q  326 tataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaaca 386  Q
    ||||| |||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||    
T  18543273 tataagatataagttgttttcataagctatcctggagagcttatg-aaataagctgaaaaca 18543213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 25461881 - 25461840
Alignment:
Q  278 cataagctatttctatagcaaaagataaataacgttaaattg 319  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  25461881 cataagctatttttatagcagaagataaatatcgttaaattg 25461840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 28586886 - 28586777
Alignment:
Q  284 ctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttga 381  Q
    ||||||||||| |||||||| |||||| || ||| ||| ||| |||||| |||||| |||||| |  |||||| ||||||| |||||  ||||||| |||    
T  28586886 ctatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctga 28586787  T
Q  382 aaacacctta 391  Q
    ||||| ||||    
T  28586786 aaacagctta 28586777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 398
Target Start/End: Original strand, 31694463 - 31694584
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||| |||||| ||||| ||||| ||| || ||| ||| ||  || ||| ||||||||||| || ||||||  || | ||| |||||||||||||    
T  31694463 ataagctatgtctataacaaaacataaactaaagtcaaactgtttttatacaaactataagttgttctcttaagctcacttgtagagcttatgaaaataa 31694562  T
Q  377 gttgaaaacaccttatgaacaa 398  Q
    |||||||||| |||||| ||||    
T  31694563 gttgaaaacaacttatggacaa 31694584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 32197719 - 32197780
Alignment:
Q  332 atataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttat 392  Q
    ||||||| ||||| |||||||||||  || ||||||||||||||||| |||||||| |||||    
T  32197719 atataagctgtttccataagctatcctgaagaacttatgaaaataagatgaaaacagcttat 32197780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 36318776 - 36318833
Alignment:
Q  335 taagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacacctta 391  Q
    |||||||||||||||||||||| | ||||| ||||| ||||||| |||||||| ||||    
T  36318776 taagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagctta 36318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 37588430 - 37588365
Alignment:
Q  333 tataagttgttttcataagcta-tctagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||||||||||||||| || ||| |||| |||||| ||||||| |||||||| ||||| ||||    
T  37588430 tataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaaca 37588365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 42582473 - 42582548
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcata--agctatct-agagaacttatgaaaataagttgaaaa 384  Q
    |||||||||| ||| |||||| ||||| |||||||||||  || ||||| |||||||||||| ||||||||||||||    
T  42582473 gttaaattgttttcatataaattataa-ttgttttcatataagttatcttagagaacttatggaaataagttgaaaa 42582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 8e-27; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 279 - 419
Target Start/End: Complemental strand, 9093681 - 9093539
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| |||||||||  |||||| |||||||||||||| || ||||||||||| ||||||||    
T  9093681 ataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataa 9093582  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    | ||||||||  |||| |||||| | |||| || |||||||||    
T  9093581 gctgaaaacaggttattaacaatgtcataagctattttcataa 9093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 279 - 419
Target Start/End: Original strand, 2735014 - 2735156
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagag-aacttatgaaaataa 376  Q
    ||||||||| |||||| ||||||||||| ||| |||||||| | || ||||||  |||||| ||||||||||||| |||| ||  |||||||||||||||    
T  2735014 ataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataa 2735113  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |  ||||||| |||||||| ||| | |||| | ||||||||||    
T  2735114 gccgaaaacagcttatgaaaaatgtcataagccgttttcataa 2735156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 34882490 - 34882390
Alignment:
Q  333 tataagttgttttcataagctatctagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaaca 432  Q
    ||||| ||||||||||||  |||||  ||||||||||||||||||| ||||||| |||||||||||| | ||||  | ||||||||| ||||| ||||||    
T  34882490 tataatttgttttcataacttatctgaagaacttatgaaaataagtggaaaacaacttatgaacaatgtcataacttattttcataaattctcctaaaca 34882391  T
Q  433 g 433  Q
    |    
T  34882390 g 34882390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 6647394 - 6647452
Alignment:
Q  340 tgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaaca 6647452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 279 - 391
Target Start/End: Complemental strand, 9559666 - 9559553
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagag-aacttatgaaaataa 376  Q
    ||||| |||||||||||||||||||||| |||  ||||||||| |||||| ||| || ||  |||||||| ||||||||| ||  |||||||||||||||    
T  9559666 ataagttatttctatagcaaaagataaaataaatttaaattgttttcgtagaaactacaaactgttttca-aagctatcttgaataacttatgaaaataa 9559568  T
Q  377 gttgaaaacacctta 391  Q
    |||||||||| ||||    
T  9559567 gttgaaaacagctta 9559553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 769087 - 769203
Alignment:
Q  282 agctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagttg 380  Q
    ||||||||||||| |||||| |||| ||| ||||| || | || ||||||  |||||  ||||||||||||||| || ||| ||||| |||| |||||||    
T  769087 agctatttctataacaaaagctaaaataaagttaatttttttttgtataagctataaactgttttcataagctaacttgaggacttaagaaagtaagttg 769186  T
Q  381 aaaacaccttatgaaca 397  Q
    |||||| ||||||||||    
T  769187 aaaacagcttatgaaca 769203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 333 - 424
Target Start/End: Original strand, 31624090 - 31624181
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    |||||| |||||||||| ||||||| | |||| |||||||||||||||||||||| ||||||||| || | |||| |||||||||||| ||||    
T  31624090 tataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaac-atgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 24626237 - 24626319
Alignment:
Q  276 tacataagctatttctatagcaaaagataaat-aacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    |||||||||||||||||||| ||| ||||||  || |||||||||| || |||||   |||||||||||||||||||||||||    
T  24626237 tacataagctatttctataggaaaggataaaacaaagttaaattgtttttgtatattctataagttgttttcataagctatct 24626319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 20368250 - 20368185
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||||||  | ||||||||||    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaaca 20368185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 425
Target Start/End: Original strand, 13907574 - 13907678
Alignment:
Q  322 ttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataac 420  Q
    |||||||||  |||||||||||||||||||| ||| | ||||| ||||||||||||  |||||| | ||| |||||||| | | || ||||||||||||     
T  13907574 ttcgtataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataaa 13907673  T
Q  421 ttctc 425  Q
    |||||    
T  13907674 ttctc 13907678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 334 - 433
Target Start/End: Original strand, 34403856 - 34403955
Alignment:
Q  334 ataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaaca 432  Q
    ||||| |||||||||||||| | ||| ||| |||||| ||||||| |||||||||||||||||| || | ||||  ||||||| ||||||||| ||||||    
T  34403856 ataagatgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaac-atgtcataagttgttttcttaacttctcctaaaca 34403954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 264285 - 264364
Alignment:
Q  248 cacaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgt 326  Q
    ||||||||||||| ||| ||| ||||| || |||||||||||||| |||||||||| |||||| ||||||| || |||||    
T  264285 cacaagtgcttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgt 264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 392
Target Start/End: Complemental strand, 281973 - 281858
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||||| ||||| |||||||| |||||| || || |||| ||| |||||  |||||| ||| |||||||||||| ||||||| || ||| ||||||    
T  281973 ataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataa 281874  T
Q  377 gttgaaaacaccttat 392  Q
    | |||||||| |||||    
T  281873 gctgaaaacaacttat 281858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 424
Target Start/End: Original strand, 1575783 - 1575842
Alignment:
Q  365 ttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    ||||||||||||||||||||||||||||| |||  || |||| |||||||||||| ||||    
T  1575783 ttatgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataagttct 1575842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 276 - 382
Target Start/End: Complemental strand, 6910001 - 6909892
Alignment:
Q  276 tacataagctatttctatagcaaaagataaa--taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaa 372  Q
    |||||||||||||||||||| |||||| |||  ||| |||||||||| || |||||   ||||||||||||||||||  |||| | ||||| ||||||||    
T  6910001 tacataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaa 6909902  T
Q  373 ataagttgaa 382  Q
     |||| ||||    
T  6909901 ttaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 9912234 - 9912168
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||||||||| | |||||| |||||||||||| | |||| ||| |||||||| |||||    
T  9912234 gagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctc 9912168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 1402942 - 1403019
Alignment:
Q  280 taagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc 356  Q
    ||||||||||||||| |||||||| |||||| |||||| | | ||| |||||  ||||| ||||||||||||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatc 1403019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 393
Target Start/End: Original strand, 4006658 - 4006775
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaata 375  Q
    |||||| |||||||||| |||| |||||| ||| || ||||||| ||  |||||  ||||||||||||||||||||||| |  ||||  |||||||||||    
T  4006658 cataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaata 4006757  T
Q  376 agttgaaaacaccttatg 393  Q
    || |||||| | ||||||    
T  4006758 agctgaaaataacttatg 4006775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 25099990 - 25100095
Alignment:
Q  281 aagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagt 378  Q
    |||||||||||| ||||||| || |||||  || ||||||| ||| || ||  |||||||||||||||||||||||| || ||| |||||  ||||||||    
T  25099990 aagctatttctaaagcaaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagt 25100089  T
Q  379 tgaaaa 384  Q
    ||||||    
T  25100090 tgaaaa 25100095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 29274354 - 29274281
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataag 351  Q
    ||||||||||||||||||||||||| |||||| || ||||||| ||| |||||  |||||  ||||||||||||    
T  29274354 ataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 31812091 - 31812038
Alignment:
Q  325 gtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataag 377  Q
    |||||| ||||||||||||||||||||||||| | |||| ||||||||||||||    
T  31812091 gtataagatataagttgttttcataagctatcttggagagcttatgaaaataag 31812038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 33828600 - 33828669
Alignment:
Q  287 tttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc 356  Q
    |||||| |||||| | ||||||| || ||||||| |||||||||  ||||||||||||| ||||||||||    
T  33828600 tttctacagcaaaggttaaataaagtcaaattgttttcgtataagttataagttgttttaataagctatc 33828669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 8147644 - 8147724
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat 355  Q
    |||||||||||||| ||||||||||||| |||||| ||| |||||| || |||||   || ||| ||||||||||||||||    
T  8147644 tacataagctatttttatagcaaaagataaaataaagttgaattgtttttgtatattctaaaagatgttttcataagctat 8147724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 333 - 416
Target Start/End: Complemental strand, 34430531 - 34430447
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttca 416  Q
    |||||| |||||||||||||||||| | |||| ||||||||||||| |||||| | |||||||  ||| | |||| |||||||||    
T  34430531 tataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgttttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 35099037 - 35099089
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaa 384  Q
    |||||||||||||||||||||||| ||||| | || |||||||||||||||||    
T  35099037 tataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaa 35099089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 397
Target Start/End: Original strand, 415282 - 415369
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||| |||||||||  ||||||||||||| |||||||||  | ||||||||||| ||  ||| ||||||||  |||||||||    
T  415282 gttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaaca 415369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 24836324 - 24836218
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||| |||||||||| |||||||| |||||| || ||||||| |||||||||| |||||   |||||| ||||||||| | |||| |||||| ||||||    
T  24836324 ataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagcttatggaaataa 24836228  T
Q  377 gttgaaaaca 386  Q
    | || |||||    
T  24836227 gctggaaaca 24836218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 26694856 - 26694931
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaac 385  Q
    |||||||||| | ||||||   ||||| |||||||||||| |||||| || ||||||||||||||||| |||||||    
T  26694856 gttaaattgtttccgtatatgttataaattgttttcataaactatcttgaagaacttatgaaaataagctgaaaac 26694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 30536684 - 30536641
Alignment:
Q  278 cataagctatttctatagcaaaagataa-ataacgttaaattgt 320  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  30536684 cataagctatttttatagcaaaagataagataacgttaaattgt 30536641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 31624203 - 31624278
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagct 353  Q
    |||||||||||||||| |||||||| ||||||  ||||||||| |||||||||  ||| || |||||| |||||||    
T  31624203 ataagctatttctataacaaaagataaaataagtttaaattgttttcgtataatctattagctgttttaataagct 31624278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 835311 - 835265
Alignment:
Q  341 gttttcataagctatctag-agaacttatgaaaataagttgaaaaca 386  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||    
T  835311 gttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 837308 - 837234
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaa 384  Q
    |||||||||| || || |||  ||||||| |||||||| |||||||| | |||||||||||||||||| ||||||    
T  837308 gttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 2112172 - 2112265
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||| ||| |||||| |||||||||||||||||| ||||| |||||  |||||  ||||||   ||||||| ||||||||||    
T  2112172 aaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaaca 2112265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 9559457 - 9559391
Alignment:
Q  367 atgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaacag 433  Q
    |||| ||||| | ||||||| |||||||||||| |  ||| |||||||||||||||||| |||||||    
T  9559457 atgagaataaatcgaaaacagcttatgaacaatgttgtaagctgttttcataacttctcctaaacag 9559391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Complemental strand, 20671990 - 20671912
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc 356  Q
    |||||||||||||| | ||||||||||| ||| || ||||||| |||||||||  | ||| |||||||||||| |||||    
T  20671990 ataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatc 20671912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 418
Target Start/End: Complemental strand, 34910510 - 34910393
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaa--tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatt 400  Q
    |||||| ||| |||||| |||||||| ||  ||||||||||| |||||| || | | | ||||||||||||| ||||  ||||||| || |||||||||     
T  34910510 aaataatgttgaattgttttcgtatataagctataagttgttctcataatctgttttggagaacttatgaaagtaagcggaaaacaactcatgaacaatg 34910411  T
Q  401 tgataatctgttttcata 418  Q
    | |||| |||||||||||    
T  34910410 tcataagctgttttcata 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 2455259 - 2455352
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||| |||||||||| || |||| | |||| || |||||||||| |||||||| ||||| |||||| | ||||  ||||||||||| |||||    
T  2455259 tataagctgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctc 2455352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 9763563 - 9763612
Alignment:
Q  336 aagttgttttcataagctatctag-agaacttatgaaaataagttgaaaa 384  Q
    |||||||||||||||||||| | | ||||||||||||| |||||||||||    
T  9763563 aagttgttttcataagctatattgtagaacttatgaaattaagttgaaaa 9763612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 5e-22; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 285 - 399
Target Start/End: Original strand, 27049319 - 27049433
Alignment:
Q  285 tatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagttgaaaa 384  Q
    ||||||||||||||||||||||||| ||| |||| | |||||||||  |||||  | |||||||||||||| | ||||| ||||||||||||| ||||||    
T  27049319 tatttctatagcaaaagataaataaagttcaattattttcgtataagctataaacttttttcataagctatttggagaaattatgaaaataagatgaaaa 27049418  T
Q  385 caccttatgaacaat 399  Q
    || | ||||||||||    
T  27049419 cagcatatgaacaat 27049433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 279 - 425
Target Start/End: Original strand, 10114435 - 10114582
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataag 377  Q
    ||||||||||||||||||||||||||||  | ||| |||||| || ||||||  |||||| ||||||||| ||||||  | |||||| ||||||||||||    
T  10114435 ataagctatttctatagcaaaagataaaataagttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatgaaaataag 10114534  T
Q  378 ttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
     |||||||| | |||||  ||| | ||||  ||||||||||| |||||    
T  10114535 ctgaaaacagcatatgataaatgttataagttgttttcataagttctc 10114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 392
Target Start/End: Complemental strand, 16211011 - 16210896
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||||||||| ||| |||||| ||| |||| ||||| ||| |||||  ||||||||||||||| || ||||||||  ||||||| ||||||||    
T  16211011 ataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgttttcaaaacctatctagtggaacttacgaaaataa 16210912  T
Q  377 gttgaaaacaccttat 392  Q
    | |||||||| |||||    
T  16210911 gctgaaaacagcttat 16210896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 42043473 - 42043370
Alignment:
Q  276 tacataagctatttctatagcaaaagataaataac-gttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaa 373  Q
    |||||| ||||||||||||||||||||||||   | |||||||||| || | |||  ||||||||||||||||||||||||| ||||||||| |||| ||    
T  42043473 tacatatgctatttctatagcaaaagataaaatgcagttaaattgtttttggatatgatataagttgttttcataagctatcttagagaactaatgacaa 42043374  T
Q  374 taag 377  Q
    ||||    
T  42043373 taag 42043370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 282 - 425
Target Start/End: Complemental strand, 9956934 - 9956791
Alignment:
Q  282 agctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagtt 379  Q
    ||||||||||||| ||||||||||| ||| |||  ||| |  || |||||  |||||||||||||||||| |||||| | |||||||||||||||||| |    
T  9956934 agctatttctataacaaaagataaaataaagttttatttt--tcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagct 9956837  T
Q  380 gaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||  ||||||||||||   |||| || ||||||||| |||||    
T  9956836 gaaaactacttatgaacaatgccataaactattttcataagttctc 9956791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 395
Target Start/End: Complemental strand, 37353368 - 37353256
Alignment:
Q  284 ctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaa 382  Q
    ||||||||||| |||||||||||||| |||||||||| || || ||   |||||| ||||||| ||||||||| | |||| |||||||||||||  ||||    
T  37353368 ctatttctataacaaaagataaataaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaa 37353269  T
Q  383 aacaccttatgaa 395  Q
    ||||  |||||||    
T  37353268 aacagtttatgaa 37353256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 7514523 - 7514645
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||||||||||||||  | |||||| ||| |||||| ||| |||||  || ||| |||||||||||||||| | | ||||||  ||||||| |    
T  7514523 ataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctattttgcagaactagtgaaaatta 7514622  T
Q  377 gttgaaaacaccttatgaacaat 399  Q
    |||| ||||| ||||||||||||    
T  7514623 gttggaaacagcttatgaacaat 7514645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 30389106 - 30389164
Alignment:
Q  340 tgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||| ||||||||||    
T  30389106 tgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaaca 30389164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 1930035 - 1930128
Alignment:
Q  333 tataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||| |||||||||||||||||| |  || ||| |||||||||| |||||||| |||||||||||| | |||| ||||||||| || |||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctc 1930128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 9699946 - 9700062
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    |||||||||||| ||| |||||| |||| ||| || ||||||| |||  ||||| |||||| |||||||||| | ||| | ||||| |||||||||||||    
T  9699946 ataagctatttcgataacaaaagttaaaataaggtcaaattgttttcaaataaattataagctgttttcatatgttattcaagagagcttatgaaaataa 9700045  T
Q  377 gttgaaaacaccttatg 393  Q
    | |||||||| ||||||    
T  9700046 ggtgaaaacagcttatg 9700062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 31862438 - 31862554
Alignment:
Q  279 ataagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||| |||||| ||| |||||||||| |||| || ||| | |  ||||||||  |||||| |||||||||||| |||| |||||| |||||||||||||    
T  31862438 ataagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataa 31862537  T
Q  377 gttgaaaacaccttatg 393  Q
    | |||||||| ||||||    
T  31862538 gctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 385
Target Start/End: Complemental strand, 3537156 - 3537046
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttc--ataagctatc-tagagaacttatgaaaat 374  Q
    |||||| |||||||||||||||||| |||||| || ||||||| |||||||||  |||| |||||| ||  ||||| |||| | ||||||||||| ||||    
T  3537156 ataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatggaaat 3537057  T
Q  375 aagttgaaaac 385  Q
    ||| |||||||    
T  3537056 aagctgaaaac 3537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 392
Target Start/End: Original strand, 13652160 - 13652275
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagcta-tctagagaacttatgaaaataa 376  Q
    |||||||||||||||||||||||||  ||| | || ||||||| ||| |||||  ||||| ||||||| |||||||| ||| |||| |||| | ||||||    
T  13652160 ataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataa 13652259  T
Q  377 gttgaaaacaccttat 392  Q
    || ||||||| |||||    
T  13652260 gtagaaaacagcttat 13652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 392
Target Start/End: Original strand, 13710803 - 13710918
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagcta-tctagagaacttatgaaaataa 376  Q
    |||||||||||||||||||||||||  ||| | || ||||||| ||| |||||  ||||| ||||||| |||||||| ||| |||| |||| | ||||||    
T  13710803 ataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataa 13710902  T
Q  377 gttgaaaacaccttat 392  Q
    || ||||||| |||||    
T  13710903 gtagaaaacagcttat 13710918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 279 - 425
Target Start/End: Original strand, 10120702 - 10120849
Alignment:
Q  279 ataagctatt-tctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||| | ||||||||||||| |||||  |||||||||| || ||||||  |||||| ||||| ||| | |||| | | ||||||||||||||||    
T  10120702 ataagctattctatatagcaaaagattaaata--gttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaata 10120799  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    || |||||||| | |||||  ||| | |||| |||||||||||| |||||    
T  10120800 agctgaaaacagcatatgataaatgtcataagctgttttcataagttctc 10120849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 277 - 425
Target Start/End: Original strand, 26771208 - 26771358
Alignment:
Q  277 acataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaat 374  Q
    ||||||||||||||||||| |||  ||||| |||  ||||||||| || |||||   |||||| | |||| ||||| ||| | |||||||||||||||||    
T  26771208 acataagctatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaat 26771307  T
Q  375 aagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||   ||| |||| | | | |||| |||||||||||| |||||    
T  26771308 aagttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctc 26771358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 35749641 - 35749547
Alignment:
Q  332 atataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| |  ||||||| |||   | || |||||||||||| |||||    
T  35749641 atataagttgtttccataagctatcttaaagaacttatgaaaatatgttgaaaaaagtttatgaaaaatgctacaagctgttttcataagttctc 35749547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 26473820 - 26473775
Alignment:
Q  335 taagttgttttcataagctat-ctagagaacttatgaaaataagtt 379  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26473820 taagttgttttcataagctatcctagagagcttatgaaaataagtt 26473775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 27028831 - 27028924
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||| |||||||||||||||||| | ||| |||||||||||||| |||||| | |||||||| ||| |  ||| ||||||||| || |||||    
T  27028831 tataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaatttctc 27028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 2595096 - 2595002
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagct--atctagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||| ||||||  |   ||||||||||||||||||||  || |||| ||||||||| |||||| |||||||| ||||||||||    
T  2595096 aaataaagttaaattgttttcgtactagccataagttgttttcataagctgcat-tagacaacttatgagaataagctgaaaacaacttatgaaca 2595002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 3936794 - 3936894
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||| ||||||||||| |||| |||||| ||| | |||||||||||| |||||  |||||| ||||||| ||||||| || | || ||||||||||||||    
T  3936794 ataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagctataagctgttttcgtaagctaacttgaagcacttatgaaaataa 3936893  T
Q  377 g 377  Q
    |    
T  3936894 g 3936894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 14247300 - 14247240
Alignment:
Q  327 ataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaaca 386  Q
    ||||| |||||| ||||||| |||| |||| ||||||||||||||||||||| ||||||||    
T  14247300 ataaactataagctgttttcgtaagatatcgtagagaacttatgaaaataagctgaaaaca 14247240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 33808332 - 33808396
Alignment:
Q  361 gaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||||||| | |||||| |||||||||||| | |||| || ||||||||| |||||    
T  33808332 gaacttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctc 33808396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 376
Target Start/End: Original strand, 4558743 - 4558842
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    ||||||||||||||||  ||||||| |||||| |||||||| | ||| ||||   |||||| ||||| |||||||||| ||||||| |||||| ||||||    
T  4558743 ataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataa 4558842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 32841022 - 32840963
Alignment:
Q  366 tatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||||||| |||||||| |||||||||||| | ||||  ||||||||||| |||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctc 32840963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 7714242 - 7714296
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaaca 386  Q
    |||||||||||||||| ||||||| | |||| || ||||||||||||||||||||    
T  7714242 tataagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaaca 7714296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 20672757 - 20672815
Alignment:
Q  340 tgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||| | |||| |||||||||||||| |||||||| ||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaaca 20672815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 24558831 - 24558877
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    |||||||| | |||||||||  |||||||||||||||||||||||||    
T  24558831 gttaaattattttcgtataagctataagttgttttcataagctatct 24558877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 30277316 - 30277254
Alignment:
Q  332 atataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||||| |||||||||||||||| |||||||  ||||| ||||||| |||||||| ||||||    
T  30277316 atataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 33714306 - 33714240
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    |||||| | |||||||||||||||| | ||| ||||| |||||||| |||||||| |||||||||||    
T  33714306 tataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaacaa 33714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 42597346 - 42597420
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagc 352  Q
    |||||||||||||||| |||||||| |||||| || ||||||| ||| |  ||  ||||||||||||||||||||    
T  42597346 ataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 398
Target Start/End: Original strand, 43504751 - 43504817
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    |||||| |||||| ||||||||||| | |||||||||| ||||||| |||||||| ||||| |||||    
T  43504751 tataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaa 43504817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 7918898 - 7918789
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||| ||||||||||| | ||| ||||| ||| |||||||| | ||| | |||  ||||||||||||||||||||||||| | ||| ||| || ||||||    
T  7918898 ataacctatttctatatcgaaaaataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataa 7918799  T
Q  377 gttgaaaaca 386  Q
    | ||||||||    
T  7918798 gctgaaaaca 7918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 8062329 - 8062390
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||| ||||||||||||||||| ||||||  ||||| ||||||| |||||||| ||||||    
T  8062329 tataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 424
Target Start/End: Complemental strand, 10758376 - 10758235
Alignment:
Q  284 ctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaacttatgaaaataagttgaa 382  Q
    ||||||||||||||||  ||||| ||| |||||||||| || |||||   |||||||||| || ||||||||| |    |||||||||||| ||| ||||    
T  10758376 ctatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctataagttgtctttataagctatattagcaacttatgaaaacaagctgaa 10758277  T
Q  383 aacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    || | ||| |||| | | | |||| |||||||||||| ||||    
T  10758276 aaaagcttttgaaaattgtcataagctgttttcataaattct 10758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 11185221 - 11185286
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||| | ||||||| | |||| || ||| |||||||||||||||| ||||||||||    
T  11185221 tataagttgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaaca 11185286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 12851182 - 12851262
Alignment:
Q  339 ttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||||||||||| || | |||| ||||||||||||||  ||||||| ||||||||| || | |||| ||||||||||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaac-atgttataagctgttttcataa 12851262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 306
Target Start/End: Complemental strand, 29168179 - 29168150
Alignment:
Q  277 acataagctatttctatagcaaaagataaa 306  Q
    ||||||||||||||||||||||||||||||    
T  29168179 acataagctatttctatagcaaaagataaa 29168150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 314 - 398
Target Start/End: Complemental strand, 41336734 - 41336649
Alignment:
Q  314 aaattgtcttcgtataaaatataagttgttttcataagctatcta-gagaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    ||||||| ||| |||||| || || |||||||||||||||||||| |||| |||  | ||||||| |||||||| ||||| |||||    
T  41336734 aaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaacaacttataaacaa 41336649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 7e-21; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 281 - 419
Target Start/End: Original strand, 18066075 - 18066215
Alignment:
Q  281 aagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagt 378  Q
    |||||||||||| || |||| || |||||| |||||||||| ||| |||||  |||||| ||||||||||||||||| | ||||||||| |||||||||     
T  18066075 aagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataagg 18066174  T
Q  379 tgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||| | ||||||| |||| | |||| ||||||||||||    
T  18066175 tgaaaatagcttatgagcaatgtcataagctgttttcataa 18066215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 1625871 - 1625965
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||| |||||||||  |||||||||||||||||||||||| | ||||||||| |||||| || |||||||| ||||||||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaaca 1625965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 291 - 425
Target Start/End: Original strand, 26626829 - 26626966
Alignment:
Q  291 tatagcaaaagataaat--aacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacac 387  Q
    ||||||||||||||||   || |||||||||| |||||||||  || ||| |||||||||||||||||| | |||||||||||||||||  ||||||||     
T  26626829 tatagcaaaagataaaacgaaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacag 26626928  T
Q  388 cttatgaacaatttgataatctgttttcataacttctc 425  Q
     ||||||||||| | |||| || ||||| ||| |||||    
T  26626929 attatgaacaatgtcataagctattttcgtaagttctc 26626966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 40682456 - 40682398
Alignment:
Q  341 gttttcataagctatctagagaacttatgaaaataagttgaaaacaccttatgaacaat 399  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  40682456 gttttcataagatatcttgagaacttatgaaaataagttgaaaacaacttatgaacaat 40682398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 26143766 - 26143658
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaa-tataagttgttttcataagctatc-tagagaacttatgaaaata 375  Q
    ||||||||||||||||||||||||| |||||| ||| |||| | |||||| |||| | |||| ||||||||||||||| | | |||||||||||||||||    
T  26143766 ataagctatttctatagcaaaagataaaataaagttcaattatattcgtaaaaaactgtaagctgttttcataagctaacttggagaacttatgaaaata 26143667  T
Q  376 agttgaaaa 384  Q
    || ||||||    
T  26143666 agctgaaaa 26143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 425
Target Start/End: Original strand, 45229454 - 45229604
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaa 373  Q
    |||||||||||||||||||||||| ||| |||| | |||||||||| || |||||   ||| | |||||||||||||||||| | |||||||||||||||    
T  45229454 tacataagctatttctatagcaaacgataaaatgaggttaaattgtttttgtatatgttatca-ttgttttcataagctatcttcgagaacttatgaaaa 45229552  T
Q  374 taagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||| |||||| | || ||||| ||| | ||||  | ||||||||| |||||    
T  45229553 taagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctc 45229604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 276 - 384
Target Start/End: Complemental strand, 12464601 - 12464491
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaa 373  Q
    |||||||||||||||| ||| ||||||| |||||| |||||||||| || |||||   |||||| | ||||||||||||||| | |||||||| ||||||    
T  12464601 tacataagctatttctgtagaaaaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaa 12464502  T
Q  374 taagttgaaaa 384  Q
    |||| ||||||    
T  12464501 taagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 278 - 425
Target Start/End: Complemental strand, 43279653 - 43279506
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||||| |||| ||||||||||| ||| || ||||||| || ||||    ||||||||||||| ||||||||| | | ||||||| ||||||||    
T  43279653 cataagctatttttatatcaaaagataaaataatgtgaaattgtttttgtatgc--tataagttgtttttataagctatattggagaacttgtgaaaata 43279556  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||| | |||||||| | | | |||| |||||||||||| |||||    
T  43279555 agttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctc 43279506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 311 - 419
Target Start/End: Original strand, 40279175 - 40279284
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatct 409  Q
    |||||||||| || |||||| |||||||||||||||||||||||| | | ||||||||||||||| || |||||| |  |||||||||||   ||||  |    
T  40279175 gttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaacaatgccataagtt 40279274  T
Q  410 gttttcataa 419  Q
    ||||||||||    
T  40279275 gttttcataa 40279284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 385
Target Start/End: Complemental strand, 656902 - 656794
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||||||| ||||||||||| ||   | ||||||| |||||||||  | ||||||| ||||||||||||||| | ||| |||||||||||||    
T  656902 ataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataa 656803  T
Q  377 gttgaaaac 385  Q
    | |||||||    
T  656802 gatgaaaac 656794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 385
Target Start/End: Original strand, 4026762 - 4026870
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataa 376  Q
    ||||||||||| ||||||||||||| |||||| |||||||| | || | ||||| |||||| |||||||||||  ||| ||  |||||||||||||||||    
T  4026762 ataagctatttttatagcaaaagataaaataaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatgaaaataa 4026861  T
Q  377 gttgaaaac 385  Q
    | |||||||    
T  4026862 gctgaaaac 4026870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 392
Target Start/End: Original strand, 42457893 - 42458008
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataa 376  Q
    |||| |||||||||||| |||||||||| ||| |||||||||| || || |||  | | || ||| |||||||||||||| ||||||| |||||||||||    
T  42457893 ataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaataa 42457992  T
Q  377 gttgaaaacaccttat 392  Q
    | |||||||| |||||    
T  42457993 gctgaaaacaacttat 42458008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 43985084 - 43985021
Alignment:
Q  322 ttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaa 384  Q
    |||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||| ||||||    
T  43985084 ttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 40279408 - 40279474
Alignment:
Q  334 ataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaat 399  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||  ||||| |||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggacaat 40279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 43199359 - 43199437
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc 356  Q
    ||||| |||||||| | ||||||||||| ||| |||||||| |||||||||||  |||||||||||||||||| |||||    
T  43199359 ataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcataaactatc 43199437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 9174759 - 9174882
Alignment:
Q  279 ataagctatttctatagcaaaagataaa--taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaata 375  Q
    ||||||||||||||||||| |||| |||  ||  ||||||| |  ||| |||  | |||||| |||||||||||||||||| | ||| ||||||||||||    
T  9174759 ataagctatttctatagcacaagaaaaaaatatagttaaatagctttcatatttactataagctgttttcataagctatcttacagagcttatgaaaata 9174858  T
Q  376 agttgaaaacaccttatgaacaat 399  Q
    || |||||| | ||||||||||||    
T  9174859 agctgaaaatagcttatgaacaat 9174882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 393
Target Start/End: Original strand, 10285793 - 10285921
Alignment:
Q  266 taaatgcttgtacataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaac 364  Q
    ||||||||| |||||||   ||||||||| ||||||| |||  | || ||| ||  ||| |||||  ||||||| |||| ||||||||| | ||||||||    
T  10285793 taaatgcttatacataaaacatttctataccaaaagaaaaaataagtcaaactggtttcatataagctataagtcgtttgcataagctaacatagagaac 10285892  T
Q  365 ttatgaaaataagttgaaaacaccttatg 393  Q
    ||||| |||||||||||||||| ||||||    
T  10285893 ttatggaaataagttgaaaacagcttatg 10285921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 13736363 - 13736303
Alignment:
Q  333 tataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttat 392  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  13736363 tataagctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttat 13736303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 397
Target Start/End: Complemental strand, 22681274 - 22681190
Alignment:
Q  314 aaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    ||||||| ||| |||||  |||||| ||||||||||| ||||| ||||||||||||| ||||||| | |||||| ||||||||||    
T  22681274 aaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaaca 22681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 419
Target Start/End: Original strand, 680483 - 680589
Alignment:
Q  313 taaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgt 411  Q
    |||||||| |||||||||  |||||| | |||||||||||||||| | ||||||| |||||||||| ||||||||  |||| ||| || | |||| ||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaac-atgtcataagctgt 680581  T
Q  412 tttcataa 419  Q
    ||||||||    
T  680582 tttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 397
Target Start/End: Complemental strand, 29316899 - 29316780
Alignment:
Q  280 taagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataag 377  Q
    |||||||| ||| || || |||||||| ||| |||||||||| |||  ||||  |||||| ||||||||| |||||||| | |||||||||| |||||||    
T  29316899 taagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataag 29316800  T
Q  378 ttgaaaacaccttatgaaca 397  Q
     |||||| | ||||||||||    
T  29316799 ctgaaaagaacttatgaaca 29316780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 395
Target Start/End: Original strand, 32592531 - 32592649
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    ||||| |||||| ||||| |||||||||| ||| |||||||||| || |||||   ||||||||||||| |||||| || | | ||||||||||||||||    
T  32592531 cataaactatttttatagaaaaagataaaataatgttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaata 32592629  T
Q  376 agttgaaaacaccttatgaa 395  Q
    |||||| || | ||||||||    
T  32592630 agttgagaaaagcttatgaa 32592649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 35379079 - 35379020
Alignment:
Q  340 tgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    |||||||||||||||||| | ||| |||||||||||||| |||||||| |||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaa 35379020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 42420419 - 42420356
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttg 341  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| || |||||  ||||||||||    
T  42420419 ataagctatttttatagcaaaagataaaataacgttaaattgtttttgtatatgatataagttg 42420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 3611171 - 3611289
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||| ||||||||||||||||| |||| ||| |||||||||| || |||||   ||||   |||||||| ||||||||| | |||||||||||||||||    
T  3611171 ataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatgaaaataa 3611270  T
Q  377 gttgaaaacaccttatgaa 395  Q
    | | ||||||  |||||||    
T  3611271 gctaaaaacagtttatgaa 3611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 5133717 - 5133823
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatct-agagaacttatgaaaataa 376  Q
    |||||||||||||||| |||||||| |||||| | |||| ||| ||  ||||| ||||||| |||||||| ||| ||||| ||||| |||||| ||||||    
T  5133717 ataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataa 5133816  T
Q  377 gttgaaa 383  Q
    | |||||    
T  5133817 gctgaaa 5133823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 296 - 384
Target Start/End: Original strand, 11513860 - 11513950
Alignment:
Q  296 caaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaa 384  Q
    ||||||||||| ||| || ||||||| ||| |||||  |||||||||||||||||||||||| | |||||||| || ||||||| ||||||    
T  11513860 caaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaa 11513950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 332 - 425
Target Start/End: Original strand, 16451117 - 16451211
Alignment:
Q  332 atataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||| ||||||| |||||||||| | ||||||  |||||||||| |||||||| || ||||||||| | ||||  ||||||||||| |||||    
T  16451117 atataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctc 16451211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 419
Target Start/End: Original strand, 40279268 - 40279354
Alignment:
Q  334 ataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||||||||||||||||||| | | ||||||||||||||| || ||||||||  |||||||||||   ||||  |||||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataa 40279354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 419
Target Start/End: Original strand, 40279338 - 40279424
Alignment:
Q  334 ataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    |||||||||||||||||||||| | | ||||||||||||||| || ||||||||  |||||||||||   ||||  |||||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataa 40279424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 9395083 - 9395196
Alignment:
Q  287 tttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaa 384  Q
    ||||||||| |||||||||| ||| | |||||||| ||| |||||  |||||| ||||||||| || ||| ||  ||| |||||||||||||| ||||||    
T  9395083 tttctatagaaaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaa 9395182  T
Q  385 caccttatgaacaa 398  Q
    || ||||| |||||    
T  9395183 cagcttataaacaa 9395196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 9477942 - 9478003
Alignment:
Q  323 tcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaa 383  Q
    ||||||||  ||||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  9477942 tcgtataagttataagttgttttcataagctatcctggagaggttatgaaaataagttgaaa 9478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 10884591 - 10884542
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttga 381  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  10884591 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 10884542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 33942150 - 33942215
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||||||||| ||| |||||| || |||||||| || |||||||| ||||||||||    
T  33942150 tataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaaca 33942215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 7928342 - 7928302
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaacaat 399  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  7928342 gagaacttatgaaaataagctgaaaacaacttatgaacaat 7928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 399
Target Start/End: Complemental strand, 14220920 - 14220825
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttt-tcataagctatctagagaacttatgaaaataagttgaaaacaccttatgaacaat 399  Q
    |||||| |||||| ||| || |||||||  ||||||||||| ||| || ||||||| |||||||||||||||||| |||||| | ||||| ||||||    
T  14220920 aaataaagttaaactgttttggtataaacaataagttgtttctcaaaatctatcta-agaacttatgaaaataagctgaaaagagcttataaacaat 14220825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 278 - 395
Target Start/End: Original strand, 26201972 - 26202091
Alignment:
Q  278 cataagctatttctatagcaaa-agataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaat 374  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||   |||||     ||||||||||||| ||||| ||| | | |||||||||||||||    
T  26201972 cataagctatttttatagcaaagagataaaataacgttaaattggtctcgtactgc-tataagttgtttttataagatatattggagaacttatgaaaat 26202070  T
Q  375 aagttgaaaacaccttatgaa 395  Q
    |||||||||| | ||||||||    
T  26202071 aagttgaaaaaagcttatgaa 26202091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 35993444 - 35993396
Alignment:
Q  339 ttgttttcataagctatc-tagagaacttatgaaaataagttgaaaaca 386  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  35993444 ttgtttgcataagctatcatagagaacttatgaaaataagctgaaaaca 35993396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 41851486 - 41851598
Alignment:
Q  285 tatttctatagcaaaagata-aataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaa 382  Q
    ||||| ||||| |||||||| ||||| |||||||||| || |||||   ||||||||||||||| |||||||| | ||||| |||||||| |||| |||     
T  41851486 tatttatataggaaaagatacaataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgag 41851585  T
Q  383 aacaccttatgaa 395  Q
    || | ||||||||    
T  41851586 aaaagcttatgaa 41851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 16867739 - 16867802
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    |||||| |||||||| ||||||||| | ||| |||||| |||||||||||||||| ||||||||    
T  16867739 tataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 16867802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 406
Target Start/End: Complemental strand, 29628830 - 29628739
Alignment:
Q  316 attgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataa 406  Q
    ||||| || ||||||  ||||||||||| ||||||||||||| | | || ||||| ||||||| ||||||||  ||||||||||||| ||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaacaattttataa 29628739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 396
Target Start/End: Original strand, 33941890 - 33941973
Alignment:
Q  314 aaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaac 396  Q
    ||||||| || ||||||  ||||| |||||||||||||||||| | ||||  |||||| |||||||||||| || |||||||||    
T  33941890 aaattgtttttgtataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaac 33941973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 393
Target Start/End: Complemental strand, 41241260 - 41241141
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaa 373  Q
    |||||||||||||||||||| ||||||| |||| | |||||||||| || |||||   ||||||| |||||| |||| |||| | || ||||| |||||     
T  41241260 tacataagctatttctataggaaaagataaaatgaagttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaat 41241161  T
Q  374 taagttgaaaacaccttatg 393  Q
    |||| |||||| | ||||||    
T  41241160 taagctgaaaaaagcttatg 41241141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 397
Target Start/End: Original strand, 42907304 - 42907426
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttca--taagctatctag-agaacttatgaaaat 374  Q
    |||||||||||||||| || |||| ||| ||| |||||||||| ||||| |||  |||||||||||||||  || |||| || | ||| |||||||||||    
T  42907304 ataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgttttcacatatgctaacttggagagcttatgaaaat 42907403  T
Q  375 aagttgaaaacaccttatgaaca 397  Q
    | | ||||| || ||||||||||    
T  42907404 aggctgaaagcagcttatgaaca 42907426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 398
Target Start/End: Original strand, 43511112 - 43511151
Alignment:
Q  359 gagaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  43511112 gagaacttatgaaaataagctgaaaacagcttatgaacaa 43511151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 750680 - 750762
Alignment:
Q  343 tttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    ||||||||||||||| | |||||||||| ||||||| | |||||| |||||||||||| | || | || ||||||||| ||||    
T  750680 tttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttct 750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 1939395 - 1939341
Alignment:
Q  340 tgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||| || |||| |||||| |||||||||||||||| ||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatg 1939341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 372
Target Start/End: Original strand, 2416227 - 2416353
Alignment:
Q  248 cacaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttc 346  Q
    ||||||| ||||| ||| ||| ||||| |  ||||| ||||||| ||||||||||| |||| | |||||||||| ||  |||||  |||||| ||||||     
T  2416227 cacaagttcttatcatgttaagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgttttt 2416326  T
Q  347 ataagctatct-agagaacttatgaaa 372  Q
    ||||| ||| | |||||||||||||||    
T  2416327 ataagttatataagagaacttatgaaa 2416353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 8017441 - 8017526
Alignment:
Q  340 tgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||||||||||||| | |||||||||||||||| |  |||||||  |||||||| || | |||| |||||||||||| |||||    
T  8017441 tgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaac-atatcataagctgttttcataagttctc 8017526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 391
Target Start/End: Complemental strand, 9877984 - 9877950
Alignment:
Q  357 tagagaacttatgaaaataagttgaaaacacctta 391  Q
    |||||||||||||||||||||||||||||| ||||    
T  9877984 tagagaacttatgaaaataagttgaaaacaactta 9877950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 21788323 - 21788381
Alignment:
Q  342 ttttcataagctatcta-gagaacttatgaaaataagttgaaaacaccttatgaacaat 399  Q
    |||||||||| ||| || |||||||||||||||||||||||||||| |  |||||||||    
T  21788323 ttttcataagttatataagagaacttatgaaaataagttgaaaacaacaaatgaacaat 21788381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 44590034 - 44590088
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaaca 386  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||||| ||||||||    
T  44590034 tataagttgttttcataagctatcttgaagaacttgtgagaataagctgaaaaca 44590088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 10646350 - 10646297
Alignment:
Q  342 ttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatga 394  Q
    |||||||||||||| | |||||||||||||||||||| |||||||  |||||||    
T  10646350 ttttcataagctattttagagaacttatgaaaataagatgaaaactgcttatga 10646297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 15377710 - 15377787
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat 355  Q
    |||||||| ||||||| |||| |||||| ||| |||| ||||| ||| |||||  |||||| ||||||||||||||||    
T  15377710 ataagctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagctat 15377787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 393
Target Start/End: Complemental strand, 36415743 - 36415682
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||| ||||||||||||||||| |  |||||||| ||||||||| |||||||| ||||||    
T  36415743 tataagctgttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatg 36415682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 347 - 419
Target Start/End: Original strand, 36534782 - 36534855
Alignment:
Q  347 ataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||||| ||| |||| | ||||||||||| |||||| |  ||||||||||||| |||| ||||||||||||    
T  36534782 ataagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataa 36534855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 3e-20; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 280 - 397
Target Start/End: Original strand, 17884014 - 17884133
Alignment:
Q  280 taagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataag 377  Q
    ||||||||||||||| ||||||||||| ||| |||||||||| || ||||||  ||| |||||||||||||||||||  | |||| ||||||||||| ||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattag 17884113  T
Q  378 ttgaaaacaccttatgaaca 397  Q
     |||||||| ||||||||||    
T  17884114 ctgaaaacaacttatgaaca 17884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 333 - 424
Target Start/End: Original strand, 49202645 - 49202737
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    |||||||||||||| |||||||||| | | |||| |||||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||||    
T  49202645 tataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttct 49202737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 3155548 - 3155670
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||||||||||||||||| |||||| |||||||||| || ||| ||  || ||| ||||||||||| |||||| | |||||| ||||||||||    
T  3155548 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataa 3155647  T
Q  377 gttgaaaacaccttatgaacaat 399  Q
    | ||||||||  ||| |||||||    
T  3155648 gctgaaaacagtttacgaacaat 3155670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 248 - 396
Target Start/End: Original strand, 51630025 - 51630175
Alignment:
Q  248 cacaagtgcttattatggtaaatgcttgtacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttc 346  Q
    ||||||||||||||||| |||   |||||    ||||||||| ||||||||||||| |||||| |||||||||| ||  |||||  |||||| | |||||    
T  51630025 cacaagtgcttattatgataagcacttgtgttcaagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttc 51630124  T
Q  347 ataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaac 396  Q
    ||||||||||| | |||| ||||||||||||| |||||||| |||| ||||    
T  51630125 ataagctatcttgaagaatttatgaaaataagctgaaaacatcttacgaac 51630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 311 - 414
Target Start/End: Complemental strand, 35571723 - 35571619
Alignment:
Q  311 gttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatgaacaatttgataatct 409  Q
    |||| ||||| |||||||||  |||||| ||||||||||||||||| |||||||||| |||||||||||||||| || || ||||||| | | |||| ||    
T  35571723 gttatattgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagct 35571624  T
Q  410 gtttt 414  Q
    |||||    
T  35571623 gtttt 35571619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 55414546 - 55414406
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||||||||| | |||||||||| ||| ||||| || | || | |||   ||||| ||||||||||||| ||||| | ||||||||||||||||    
T  55414546 cataagctatttctattggaaaagataaaataaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaata 55414447  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttca 416  Q
    ||||||||| | |||||||| ||| | |||| |||||||||    
T  55414446 agttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 281 - 425
Target Start/End: Original strand, 1706569 - 1706715
Alignment:
Q  281 aagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataagt 378  Q
    ||||||||| ||||| ||||| |||| ||| ||| |||||| |||||| ||  |||||| ||||||||||| |||||| | | | |||||||||||||||    
T  1706569 aagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagctataagctgttttcataaactatcttggacagcttatgaaaataagt 1706668  T
Q  379 tgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    || ||| | ||||||||||||   |||| |||||||||||| |||||    
T  1706669 tggaaatagcttatgaacaatgccataagctgttttcataatttctc 1706715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 333 - 418
Target Start/End: Complemental strand, 17822935 - 17822849
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcata 418  Q
    ||||||||||||||||||||||||| | |||||||||||||||||| | |||| | |||||||| ||| | |||| |||||||||||    
T  17822935 tataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcata 17822849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 397
Target Start/End: Original strand, 10192228 - 10192348
Alignment:
Q  278 cataagctatttctatagcaaaagata-aataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaata 375  Q
    ||||| |||||| |||| ||||||||| ||||| || ||||||| ||| |||||  ||||||||||||||| ||||||| || |||| | ||||||||||    
T  10192228 cataaactatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaata 10192326  T
Q  376 agttgaaaacaccttatgaaca 397  Q
    ||||||||||| |||| |||||    
T  10192327 agttgaaaacaacttacgaaca 10192348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 25885807 - 25885883
Alignment:
Q  282 agctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    |||| |||||||||||||||||||| ||| |||||||||| ||||| |||  ||||||||||||||||||| |||||    
T  25885807 agctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttatct 25885883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 47119084 - 47118981
Alignment:
Q  285 tatttctatagcaaaagataaat-aacgttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaataagttgaa 382  Q
    |||||||||| |||||||||||  || |||||||||| ||| |||||  |||||||||| |||||| ||||||| || ||||||||||| ||||| ||||    
T  47119084 tatttctatatcaaaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaa 47118985  T
Q  383 aaca 386  Q
    ||||    
T  47118984 aaca 47118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 279 - 377
Target Start/End: Complemental strand, 437558 - 437457
Alignment:
Q  279 ataagctatttct-atagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagcta-tctagagaacttatgaaaata 375  Q
    ||||||||||| | ||||||||||||||| ||| |||||||||| ||| |||||  | |||||||||||||||||||| | |||||  ||||||||||||    
T  437558 ataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctattttagaggccttatgaaaata 437459  T
Q  376 ag 377  Q
    ||    
T  437458 ag 437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 424
Target Start/End: Complemental strand, 52315322 - 52315175
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttc-gtataaaatataagttgttttcataagctatctag-agaacttatgaaaata 375  Q
    |||||||||||||| |||||||||| |||||| ||| |||||| ||  ||| ||  |||||||||||| |||||||||| | | | ||||||||||||||    
T  52315322 ataagctatttctacagcaaaagatgaaataaagtttaattgtttttagta-aagttataagttgtttccataagctattttggaaaacttatgaaaata 52315224  T
Q  376 agttgaaaacaccttatgaacaatttgataatctgttttcataacttct 424  Q
    || ||||| || |||||||| ||| ||||||  |||||| |||| ||||    
T  52315223 agctgaaagcaacttatgaataatgtgataagttgttttgataagttct 52315175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 419
Target Start/End: Original strand, 22666437 - 22666576
Alignment:
Q  283 gctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataag-ttgttttcataagctatc-tagagaacttatgaaaataagtt 379  Q
    |||||||||||||||||| ||||| ||| ||| |||| | | |||||||  |||||| || ||||||||||||||| | |||||||||||| ||||||      
T  22666437 gctatttctatagcaaaacataaaataaagttcaattttttacgtataagctataagctttttttcataagctatcatggagaacttatgacaataagca 22666536  T
Q  380 gaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||| || |||| |||| | |||| ||| ||||||||    
T  22666537 gaaaacaactcatgatcaatgtcataaactgatttcataa 22666576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 425
Target Start/End: Complemental strand, 50681217 - 50681066
Alignment:
Q  276 tacataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaa 373  Q
    |||| ||||||||| ||||| | |||||||| ||| |||||||||| || |||||   ||||||||||||  ||||||||| | | |||| |||||||||    
T  50681217 tacaaaagctatttttataggataagataaaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaa 50681118  T
Q  374 taagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||| ||||||| | |||||||| | | | || | |||||||||||| |||||    
T  50681117 taaattgaaaaaagcttatgaaaattgtcattaactgttttcataagttctc 50681066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 395
Target Start/End: Complemental strand, 54069543 - 54069424
Alignment:
Q  278 cataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaata 375  Q
    |||| ||||||| |||| ||||||||||| ||| |||||||||| || |||||   ||||| ||||||| ||||| ||| | || |||| ||||||||||    
T  54069543 catatgctatttttatatcaaaagataaaataatgttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaata 54069444  T
Q  376 agttgaaaacaccttatgaa 395  Q
    |||| |||||| ||||||||    
T  54069443 agttaaaaacagcttatgaa 54069424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 385
Target Start/End: Complemental strand, 54392943 - 54392836
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataag 377  Q
    ||||||||||||||||  |||| |||||||| |||||||||| || |||||   ||| || |||||| ||||| |||| | ||||| || ||||||||||    
T  54392943 ataagctatttctataataaaaaataaataaagttaaattgtttttgtatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 54392844  T
Q  378 ttgaaaac 385  Q
    ||||||||    
T  54392843 ttgaaaac 54392836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 55084549 - 55084486
Alignment:
Q  335 taagttgttttcataagctatct-agagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||||||||||| |||||||| ||||| |||||||||||||| ||||| || ||||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 55084486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 6466145 - 6466051
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| || ||||| | || ||||||  |||||||||||| |||||||||| |||||||  ||||| |||||||||||||| | ||||||||||    
T  6466145 aaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaaca 6466051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 11158475 - 11158373
Alignment:
Q  285 tatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaa 383  Q
    ||||||||||| |||||| ||| || || | |||| |||| || ||  |||||||||||||||||||||||| |||||| ||| || ||||||| |||||    
T  11158475 tatttctatagtaaaagacaaaaaaagtcagattgccttcatacaagttataagttgttttcataagctatcttagagagcttgtggaaataagctgaaa 11158376  T
Q  384 aca 386  Q
    |||    
T  11158375 aca 11158373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 11264301 - 11264355
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaaca 386  Q
    |||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaaca 11264355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 279 - 425
Target Start/End: Complemental strand, 21731778 - 21731633
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||||||| |||||||||||||||| |||| ||   |||| || ||||    ||||||||||||| ||||||||| | | |||| |||||||| |||    
T  21731778 ataagctatttttatagcaaaagataaagtaacatt---ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaa 21731682  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    |||||||| |  ||||||| | | |||||| |||||||||||| |||||    
T  21731681 gttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctc 21731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 28300398 - 28300304
Alignment:
Q  304 aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||||||| || ||||||  |||||  | |||||||| ||||||| || || ||||||||||||||||||||||| |||| |||||    
T  28300398 aaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 28300304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 280 - 384
Target Start/End: Original strand, 29388560 - 29388666
Alignment:
Q  280 taagctatttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataag 377  Q
    |||||| ||| |||| |||||||||| ||||||||||||||| || ||| |    |||||| ||||| ||||||||| || ||||| |||||||||||||    
T  29388560 taagctctttttataacaaaagataagataacgttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataag 29388659  T
Q  378 ttgaaaa 384  Q
    |||||||    
T  29388660 ttgaaaa 29388666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 2996573 - 2996634
Alignment:
Q  333 tataagttgttttcataagctatc-tagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||||||||||| | |||| | ||||||||||||||||||| | ||||||    
T  2996573 tataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatg 2996634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 418
Target Start/End: Complemental strand, 30066891 - 30066751
Alignment:
Q  279 ataagctatttctatagcaaaagataaataac-gttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||||||||| |||| ||||||||||  ||  |||| ||||| |||||||||| | |||| |||| |||||||||||| | |||| ||||| |||| ||    
T  30066891 ataagctatttatataccaaaagataagcaaaagttacattgttttcgtataaactgtaagctgttctcataagctatcttggagagcttataaaaacaa 30066792  T
Q  377 gttgaaaacaccttatgaacaatttgataatctgttttcata 418  Q
    | ||||||||  |||||||| || | |||| |||||||||||    
T  30066791 gctgaaaacagattatgaac-atattataagctgttttcata 30066751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 1408413 - 1408345
Alignment:
Q  287 tttctatagcaaaagataa-ataacgttaaattgtcttcgtataaaatataagttgttttcataagcta 354  Q
    |||||||| ||| |||||| ||||||||| ||||| |||||||||  ||||||||| ||||||||||||    
T  1408413 tttctataacaatagataatataacgttatattgttttcgtataatctataagttgctttcataagcta 1408345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 49219084 - 49219200
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    ||||| |||||||||| ||||| ||||| ||| || ||||| | ||| |||||  |||||||||||||||||| ||||| || |||  ||||| ||||||    
T  49219084 ataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataa 49219183  T
Q  377 gttgaaaacaccttatg 393  Q
    | |||||||| ||||||    
T  49219184 gctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 419
Target Start/End: Original strand, 22661958 - 22662097
Alignment:
Q  283 gctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgtt-ttcataagctatc-tagagaacttatgaaaataagtt 379  Q
    |||||||||||||||||| ||||| ||| ||| |||| | | |||||||  |||||| | || ||||||||||||| | |||||||||||| ||||||      
T  22661958 gctatttctatagcaaaacataaaataaagttcaattttttacgtataagctataagcttttcttcataagctatcatggagaacttatgacaataagca 22662057  T
Q  380 gaaaacaccttatgaacaatttgataatctgttttcataa 419  Q
    ||||||| || |||| |||| | |||| ||| ||||||||    
T  22662058 gaaaacaactcatgatcaatgtcataaactgatttcataa 22662097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 23459578 - 23459693
Alignment:
Q  284 ctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctagagaa-cttatgaaaataagttga 381  Q
    |||||| |||||||||||||||| | | ||||| |||| ||| |||||  |||||| ||||||||||||  |||| || || |||||||| |||||||||    
T  23459578 ctatttttatagcaaaagataaaatgaagttaagttgttttcttataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttga 23459677  T
Q  382 aaacaccttatgaaca 397  Q
    ||| | ||||| ||||    
T  23459678 aaataacttattaaca 23459693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 24929443 - 24929558
Alignment:
Q  284 ctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttga 381  Q
    ||||||||||| ||||||||||| ||| ||  || ||| ||| || ||  |||||||||||||||||| || | ||||||| |||||| ||||||| |||    
T  24929443 ctatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctga 24929542  T
Q  382 aaacaccttatgaaca 397  Q
    |||||  |||||||||    
T  24929543 aaacaatttatgaaca 24929558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 25548196 - 25548137
Alignment:
Q  335 taagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||| ||||  || ||| ||||||||||||||||||||||| ||||||    
T  25548196 taagttgttttcataaactatacagcagagcttatgaaaataagttgaaaacaacttatg 25548137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 29601071 - 29601024
Alignment:
Q  340 tgttttcataagctatc-tagagaacttatgaaaataagttgaaaaca 386  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  29601071 tgttttcatatgctatcctagagaacttatgaaaataagctgaaaaca 29601024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 40174510 - 40174630
Alignment:
Q  279 ataagctatttctatagcaaaagataaat-aacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    |||||||||||  ||||||||| |||||| || |||||||||| ||| || ||  |||||| |||||||||||||||  | | ||||||| ||| |||||    
T  40174510 ataagctattt--atagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagctacattggagaacttgtgataataa 40174607  T
Q  377 gttgaaaacaccttatgaacaat 399  Q
    ||||||||||  ||||| |||||    
T  40174608 gttgaaaacagtttatggacaat 40174630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 41512651 - 41512714
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaa 395  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||| ||| || | ||||||||    
T  41512651 tataagttgttttcataagctttctggaagaacttatgaaaataagatgataaaagcttatgaa 41512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 43505900 - 43505943
Alignment:
Q  278 cataagctatttctatagcaaaagat-aaataacgttaaattgt 320  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  43505900 cataagctatttttatagcaaaagataaaataacgttaaattgt 43505943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 397
Target Start/End: Original strand, 43824229 - 43824348
Alignment:
Q  279 ataagctatttctatagcaaaagataaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataag 377  Q
    ||||||||||||| ||||||||||||| |||  | ||||| | ||| |||||  |||||| | ||||| |||| ||| || || | |||||| |||||||    
T  43824229 ataagctatttctttagcaaaagataattaaaatcaaattcttttcatataagttataagcttttttcgtaagttatcctggaaagcttatggaaataag 43824328  T
Q  378 ttgaaaacaccttatgaaca 397  Q
     |||||||| ||||||||||    
T  43824329 ctgaaaacaacttatgaaca 43824348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 384
Target Start/End: Original strand, 44138504 - 44138611
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag-agaacttatgaaaataa 376  Q
    ||||||| ||||||||||| |||||||| ||| |||||||||  ||||||||   | ||| |||||||||||| | || | | |||||||||||||||||    
T  44138504 ataagctgtttctatagcagaagataaaataaagttaaattgctttcgtatagcctgtaatttgttttcataaaccatgttggagaacttatgaaaataa 44138603  T
Q  377 gttgaaaa 384  Q
    | ||||||    
T  44138604 gctgaaaa 44138611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 50742923 - 50742852
Alignment:
Q  316 attgtcttcgtataaaatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaaca 386  Q
    ||||| || |||||| | |||| ||||||||||||||||| || |||| ||||||||||| |||||||||||    
T  50742923 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagttgaaaaca 50742852  T

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Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 376
Target Start/End: Original strand, 56480293 - 56480392
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||| ||| ||||||| ||| ||| |||||||||| |  ||||||  |||||| ||||||||||| ||||| | |||| |||||||||||||    
T  56480293 ataagctatttccataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 3175896 - 3175974
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc 356  Q
    |||||||| |||||||||||||||| |||||| || ||||||| |||   |||  |||||| |||||||||||||||||    
T  3175896 ataagctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatc 3175974  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 25332725 - 25332838
Alignment:
Q  285 tatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatctag--agaacttatgaaaataagttga 381  Q
    ||||||||||| ||||| | |||| | |||||||||| || ||||||  | |||| | |||| |||||||||||    |||||||||||||||||| |||    
T  25332725 tatttctatagtaaaagttgaaatgaagttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctga 25332824  T
Q  382 aaacaccttatgaa 395  Q
    ||||| ||||||||    
T  25332825 aaacaacttatgaa 25332838  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 384
Target Start/End: Original strand, 29912891 - 29913000
Alignment:
Q  276 tacataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctatc-tagagaacttatgaaaa 373  Q
    ||||| ||||||||||||||||||| || |||||| || ||||||| || |||||   || |||| |||||||||||||||| | || ||||||| ||||    
T  29912891 tacatcagctatttctatagcaaaaaataaaataaagtaaaattgt-tttgtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaa 29912989  T
Q  374 taagttgaaaa 384  Q
    |||| ||||||    
T  29912990 taagctgaaaa 29913000  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 376
Target Start/End: Complemental strand, 51044544 - 51044506
Alignment:
Q  339 ttgttttcataagctatc-tagagaacttatgaaaataa 376  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  51044544 ttgttttcataagctatcctagagaacttatgaaaataa 51044506  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 2111120 - 2111075
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataag 377  Q
    ||||||||||||||||||||||||| | || |||||||||||||||    
T  2111120 tataagttgttttcataagctatcttgaaggacttatgaaaataag 2111075  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 8468952 - 8469009
Alignment:
Q  337 agttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    ||||||||||||||| ||| ||||||| |||||||||||||  |||||||| ||||||    
T  8468952 agttgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttatg 8469009  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 15132398 - 15132345
Alignment:
Q  331 aatataagttgttttcataagctat-ctagagaacttatgaaaataagttgaaa 383  Q
    ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||||||    
T  15132398 aatatgagttgtttttataagctatactagatagcttatgaaaataagttgaaa 15132345  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 308
Target Start/End: Original strand, 28274889 - 28274918
Alignment:
Q  279 ataagctatttctatagcaaaagataaata 308  Q
    ||||||||||||||||||||||||||||||    
T  28274889 ataagctatttctatagcaaaagataaata 28274918  T

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Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 31038912 - 31038871
Alignment:
Q  357 tagagaacttatgaaaataagttgaaaacaccttatgaacaa 398  Q
    ||||||||||||  |||||||||||||||| |||||||||||    
T  31038912 tagagaacttatagaaataagttgaaaacaacttatgaacaa 31038871  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 47800623 - 47800676
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaac 385  Q
    |||||| |||||||||||||||||| | ||| |||||||||||||| |||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaac 47800676  T

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Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 52259631 - 52259696
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaaca 397  Q
    |||||| |||||| ||||||||||| | ||| ||||||||||||||||||||| | ||||| ||||    
T  52259631 tataagctgtttttataagctatctgggagagcttatgaaaataagttgaaaatagcttataaaca 52259696  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 54426043 - 54426136
Alignment:
Q  333 tataagttgttttcataagctatctag-agaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctc 425  Q
    ||||||||||||| |||| |||| | | ||||||||||||||||| ||||||| | |||||||| | | | |||| |||||||| ||| |||||    
T  54426043 tataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctc 54426136  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 27521 - 27600
Alignment:
Q  279 ataagctatttctatagcaaaagataaa-taacgttaaattgtcttcgtataaaatataagttgttttcataagctatct 357  Q
    ||||| |||||||||| || |||||||| ||| || ||||||| ||| |||||| |||||||||||||||||| ||||||    
T  27521 ataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatct 27600  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 58746 - 58843
Alignment:
Q  337 agttgttttcataagctatctaga-gaacttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaacag 433  Q
    ||||||||||||||||||| | || |||||||||||| ||||||||||| | |||||||| | | | |||| ||| |||||||| || ||| ||||||    
T  58746 agttgttttcataagctatgttgaagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataaactgctttcataaattttcaaaaacag 58843  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 306329 - 306387
Alignment:
Q  336 aagttgttttcataagctat-ctagagaacttatgaaaataagttgaaaacaccttatg 393  Q
    |||||||||||||||||||| ||||||| |||||| || |||| |||||||| ||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Complemental strand, 84254 - 84177
Alignment:
Q  279 ataagctatttctatagcaaaagat-aaataacgttaaattgtcttcgtataaaatataagttgttttcataagctat 355  Q
    ||||| |||||| |||||||||||| |||||| || ||||||| ||| ||||| |||| |||||||||| ||| ||||    
T  84254 ataagttatttcaatagcaaaagataaaataatgtaaaattgttttcatataagatatgagttgttttcgtaaactat 84177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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