View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4558-Insertion-3 (Length: 1041)

Name: NF4558-Insertion-3
Description: NF4558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4558-Insertion-3
NF4558-Insertion-3
[»] chr2 (48 HSPs)
chr2 (368-874)||(9048511-9049015)
chr2 (8-290)||(9049092-9049373)
chr2 (903-1036)||(9048149-9048282)
chr2 (320-459)||(41284572-41284711)
chr2 (126-236)||(6411370-6411480)
chr2 (122-234)||(33634796-33634908)
chr2 (323-438)||(12880083-12880198)
chr2 (122-236)||(12848468-12848582)
chr2 (122-236)||(29685700-29685814)
chr2 (122-217)||(24389638-24389733)
chr2 (122-223)||(6083911-6084012)
chr2 (122-235)||(21277549-21277661)
chr2 (136-236)||(3666434-3666534)
chr2 (122-226)||(33454964-33455068)
chr2 (137-236)||(44838627-44838727)
chr2 (348-438)||(41311720-41311810)
chr2 (136-213)||(8086965-8087042)
chr2 (122-191)||(12762912-12762981)
chr2 (122-213)||(4654980-4655071)
chr2 (122-225)||(6334679-6334782)
chr2 (137-235)||(33068540-33068638)
chr2 (122-193)||(3074076-3074148)
chr2 (136-252)||(3191170-3191285)
chr2 (126-234)||(8964392-8964500)
chr2 (122-234)||(565690-565804)
chr2 (346-437)||(4640207-4640298)
chr2 (140-190)||(431676-431726)
chr2 (346-440)||(32838627-32838721)
chr2 (122-188)||(37284930-37284996)
chr2 (122-235)||(40874811-40874925)
chr2 (137-193)||(9448466-9448522)
chr2 (122-205)||(30869589-30869670)
chr2 (144-236)||(32066740-32066832)
chr2 (139-234)||(33962941-33963036)
chr2 (140-235)||(42342487-42342581)
chr2 (122-188)||(30822764-30822830)
chr2 (346-419)||(19002765-19002838)
chr2 (141-217)||(27692745-27692822)
chr2 (378-438)||(3272363-3272423)
chr2 (138-213)||(14295640-14295715)
chr2 (346-437)||(40462081-40462172)
chr2 (122-217)||(44195503-44195598)
chr2 (355-405)||(752182-752232)
chr2 (171-217)||(15806055-15806101)
chr2 (136-234)||(30523013-30523111)
chr2 (172-225)||(13197296-13197349)
chr2 (124-185)||(28858102-28858162)
chr2 (320-385)||(40867915-40867980)
[»] chr4 (42 HSPs)
chr4 (319-473)||(26683600-26683754)
chr4 (320-472)||(14193811-14193963)
chr4 (122-235)||(53261554-53261667)
chr4 (122-206)||(49951716-49951800)
chr4 (320-419)||(38868837-38868936)
chr4 (124-217)||(36876072-36876165)
chr4 (126-235)||(45743315-45743424)
chr4 (122-226)||(52650696-52650800)
chr4 (122-193)||(50617492-50617563)
chr4 (320-467)||(53333517-53333664)
chr4 (122-235)||(40252652-40252764)
chr4 (122-193)||(23136546-23136617)
chr4 (122-229)||(31262912-31263018)
chr4 (123-225)||(35153248-35153351)
chr4 (122-235)||(49795141-49795254)
chr4 (137-224)||(4391979-4392067)
chr4 (122-193)||(17970806-17970878)
chr4 (137-236)||(18939864-18939963)
chr4 (125-217)||(25042749-25042837)
chr4 (309-439)||(24970939-24971069)
chr4 (137-258)||(22889271-22889392)
chr4 (137-258)||(22940935-22941056)
chr4 (122-190)||(27963156-27963225)
chr4 (126-226)||(19597156-19597256)
chr4 (122-213)||(37461492-37461582)
chr4 (122-236)||(53622299-53622414)
chr4 (122-188)||(2818355-2818421)
chr4 (346-420)||(31557462-31557536)
chr4 (374-432)||(34015938-34015996)
chr4 (346-440)||(38547460-38547554)
chr4 (126-235)||(38681987-38682096)
chr4 (120-186)||(50343882-50343948)
chr4 (122-231)||(47937859-47937968)
chr4 (381-438)||(48051730-48051787)
chr4 (122-190)||(21241123-21241191)
chr4 (122-193)||(38354520-38354592)
chr4 (122-186)||(40173524-40173588)
chr4 (138-234)||(41370166-41370262)
chr4 (122-188)||(7852588-7852654)
chr4 (122-188)||(47995781-47995847)
chr4 (126-180)||(49622998-49623052)
chr4 (124-181)||(46570576-46570633)
[»] chr5 (36 HSPs)
chr5 (320-476)||(6539796-6539952)
chr5 (332-467)||(4462568-4462703)
chr5 (139-236)||(27325820-27325917)
chr5 (126-235)||(38594928-38595037)
chr5 (124-234)||(26453639-26453748)
chr5 (127-235)||(21259415-21259523)
chr5 (125-236)||(26432261-26432372)
chr5 (122-256)||(10228315-10228448)
chr5 (136-236)||(22601785-22601885)
chr5 (346-476)||(1863125-1863255)
chr5 (122-235)||(12221433-12221546)
chr5 (124-213)||(14309106-14309195)
chr5 (346-437)||(6662077-6662169)
chr5 (122-193)||(4695068-4695139)
chr5 (132-223)||(26686661-26686752)
chr5 (132-223)||(26956392-26956483)
chr5 (124-191)||(41568708-41568775)
chr5 (174-236)||(16636659-16636721)
chr5 (352-432)||(14688752-14688832)
chr5 (126-235)||(17774279-17774388)
chr5 (144-233)||(28639570-28639660)
chr5 (136-190)||(43000759-43000813)
chr5 (361-438)||(844745-844822)
chr5 (361-410)||(26449264-26449313)
chr5 (137-213)||(36609150-36609226)
chr5 (379-438)||(38328685-38328744)
chr5 (346-437)||(38370547-38370638)
chr5 (122-213)||(39177678-39177768)
chr5 (122-193)||(39335666-39335736)
chr5 (400-438)||(18730394-18730432)
chr5 (122-184)||(25767573-25767635)
chr5 (122-180)||(34032142-34032200)
chr5 (346-419)||(9515545-9515617)
chr5 (122-211)||(12448667-12448756)
chr5 (196-233)||(41916260-41916297)
chr5 (135-188)||(42488619-42488672)
[»] chr3 (42 HSPs)
chr3 (122-236)||(48551036-48551150)
chr3 (122-234)||(45757925-45758037)
chr3 (331-472)||(36473082-36473223)
chr3 (126-235)||(12140145-12140255)
chr3 (122-235)||(25317801-25317914)
chr3 (122-231)||(37388403-37388511)
chr3 (122-211)||(37708433-37708522)
chr3 (124-217)||(54911199-54911292)
chr3 (122-236)||(46725653-46725767)
chr3 (122-180)||(28691976-28692034)
chr3 (346-420)||(39818854-39818928)
chr3 (137-234)||(14146111-14146208)
chr3 (346-438)||(44720880-44720972)
chr3 (126-217)||(45584343-45584432)
chr3 (381-440)||(29577267-29577326)
chr3 (127-190)||(37359467-37359530)
chr3 (122-235)||(24313547-24313661)
chr3 (148-193)||(25061989-25062034)
chr3 (348-420)||(34211998-34212070)
chr3 (346-421)||(48600631-48600704)
chr3 (122-212)||(9342672-9342763)
chr3 (359-438)||(15985277-15985356)
chr3 (162-257)||(33072087-33072181)
chr3 (348-467)||(42983896-42984015)
chr3 (346-421)||(45153528-45153603)
chr3 (134-187)||(38101341-38101393)
chr3 (358-415)||(43767323-43767380)
chr3 (137-234)||(46711912-46712009)
chr3 (122-190)||(29612016-29612084)
chr3 (142-190)||(40614308-40614356)
chr3 (350-438)||(42785494-42785581)
chr3 (361-440)||(50037192-50037272)
chr3 (122-236)||(3026980-3027095)
chr3 (379-438)||(31596301-31596360)
chr3 (361-432)||(31752692-31752763)
chr3 (361-440)||(31830185-31830264)
chr3 (361-440)||(44344717-44344796)
chr3 (137-234)||(20821314-20821412)
chr3 (378-440)||(31844987-31845049)
chr3 (355-440)||(14030271-14030356)
chr3 (137-182)||(16678935-16678980)
chr3 (122-211)||(39400298-39400387)
[»] chr8 (41 HSPs)
chr8 (122-235)||(12002263-12002376)
chr8 (122-236)||(14016863-14016977)
chr8 (122-235)||(1876479-1876592)
chr8 (346-438)||(42350407-42350499)
chr8 (122-260)||(18842223-18842365)
chr8 (126-235)||(40628964-40629073)
chr8 (128-190)||(44220752-44220814)
chr8 (125-213)||(20522943-20523031)
chr8 (122-236)||(11533228-11533342)
chr8 (126-235)||(30486609-30486719)
chr8 (122-235)||(39594486-39594599)
chr8 (122-234)||(2376726-2376838)
chr8 (127-190)||(37449541-37449604)
chr8 (320-438)||(14955218-14955336)
chr8 (137-232)||(44907229-44907325)
chr8 (122-213)||(7627866-7627957)
chr8 (144-235)||(44024029-44024122)
chr8 (352-440)||(471997-472085)
chr8 (153-233)||(36907827-36907907)
chr8 (137-213)||(43841043-43841119)
chr8 (159-234)||(26014752-26014827)
chr8 (346-409)||(42631713-42631776)
chr8 (361-440)||(44711460-44711539)
chr8 (126-188)||(5218080-5218142)
chr8 (124-190)||(28382827-28382893)
chr8 (126-180)||(32271170-32271224)
chr8 (122-235)||(35501064-35501178)
chr8 (348-438)||(44063098-44063188)
chr8 (141-213)||(9629838-9629910)
chr8 (121-186)||(30158108-30158173)
chr8 (122-234)||(38047607-38047720)
chr8 (350-438)||(37953248-37953336)
chr8 (122-178)||(38019472-38019528)
chr8 (122-234)||(39691112-39691224)
chr8 (137-235)||(31844214-31844313)
chr8 (122-211)||(7513316-7513405)
chr8 (361-438)||(7859118-7859195)
chr8 (137-234)||(27505979-27506075)
chr8 (122-234)||(27801223-27801336)
chr8 (346-427)||(34496892-34496973)
chr8 (352-405)||(38869108-38869161)
[»] chr1 (45 HSPs)
chr1 (122-235)||(39973888-39974001)
chr1 (124-236)||(48947202-48947314)
chr1 (122-217)||(42573784-42573879)
chr1 (122-235)||(33791736-33791849)
chr1 (137-236)||(290602-290701)
chr1 (320-472)||(42826537-42826691)
chr1 (122-257)||(35259023-35259156)
chr1 (122-236)||(40286854-40286968)
chr1 (320-437)||(29356896-29357012)
chr1 (146-235)||(38172665-38172754)
chr1 (122-234)||(48884-48996)
chr1 (122-235)||(49478808-49478922)
chr1 (320-429)||(15280480-15280589)
chr1 (122-226)||(3047863-3047967)
chr1 (126-234)||(40053293-40053401)
chr1 (136-236)||(51904565-51904665)
chr1 (122-213)||(16113915-16114006)
chr1 (122-236)||(4040889-4041003)
chr1 (124-210)||(31042999-31043085)
chr1 (122-193)||(34861251-34861322)
chr1 (137-235)||(31398408-31398506)
chr1 (122-199)||(33744168-33744245)
chr1 (379-440)||(42592678-42592739)
chr1 (122-211)||(48811929-48812018)
chr1 (352-440)||(28765519-28765607)
chr1 (126-190)||(31807822-31807886)
chr1 (126-234)||(35543401-35543509)
chr1 (122-229)||(290852-290959)
chr1 (124-235)||(24034055-24034166)
chr1 (355-438)||(34620617-34620700)
chr1 (346-420)||(2507012-2507086)
chr1 (392-438)||(17630326-17630372)
chr1 (122-236)||(46804820-46804934)
chr1 (122-211)||(4521029-4521118)
chr1 (126-226)||(44442250-44442350)
chr1 (361-420)||(27262759-27262818)
chr1 (393-467)||(1905709-1905783)
chr1 (124-226)||(5423752-5423854)
chr1 (122-212)||(26700245-26700335)
chr1 (123-181)||(34833738-34833796)
chr1 (320-405)||(1411676-1411760)
chr1 (346-419)||(1609740-1609812)
chr1 (142-187)||(8791485-8791530)
chr1 (122-211)||(36321646-36321735)
chr1 (148-225)||(44461597-44461673)
[»] chr7 (37 HSPs)
chr7 (320-444)||(31188731-31188855)
chr7 (320-470)||(5000330-5000481)
chr7 (137-236)||(8237961-8238060)
chr7 (122-235)||(3267607-3267720)
chr7 (126-235)||(34299740-34299849)
chr7 (127-235)||(19619993-19620101)
chr7 (126-236)||(24299127-24299237)
chr7 (126-235)||(26871771-26871880)
chr7 (353-450)||(23797722-23797819)
chr7 (124-235)||(24610835-24610946)
chr7 (330-431)||(27088307-27088409)
chr7 (330-431)||(27189892-27189994)
chr7 (128-235)||(5482405-5482511)
chr7 (122-236)||(5907820-5907933)
chr7 (122-185)||(31498676-31498739)
chr7 (122-225)||(39316300-39316403)
chr7 (126-213)||(41150034-41150121)
chr7 (122-180)||(25176340-25176398)
chr7 (122-259)||(44452015-44452152)
chr7 (361-438)||(35116895-35116972)
chr7 (126-190)||(25037007-25037071)
chr7 (122-190)||(43492244-43492312)
chr7 (323-382)||(36595376-36595435)
chr7 (122-234)||(38988702-38988816)
chr7 (126-186)||(38362255-38362315)
chr7 (122-217)||(18926323-18926418)
chr7 (122-217)||(23682468-23682561)
chr7 (357-420)||(35494685-35494748)
chr7 (353-408)||(35720981-35721036)
chr7 (346-440)||(43189821-43189916)
chr7 (122-213)||(46716175-46716266)
chr7 (353-419)||(4232761-4232827)
chr7 (147-193)||(10453485-10453531)
chr7 (137-211)||(42911071-42911145)
chr7 (361-438)||(28198010-28198087)
chr7 (121-162)||(41431161-41431202)
chr7 (357-438)||(47356600-47356681)
[»] chr6 (19 HSPs)
chr6 (320-476)||(10228308-10228463)
chr6 (122-235)||(5704555-5704667)
chr6 (137-236)||(10364754-10364853)
chr6 (330-472)||(3686800-3686942)
chr6 (122-235)||(13445728-13445841)
chr6 (320-438)||(8082455-8082572)
chr6 (136-213)||(10429738-10429814)
chr6 (122-185)||(3753142-3753205)
chr6 (122-223)||(3769326-3769428)
chr6 (141-234)||(30910428-30910521)
chr6 (348-420)||(32547693-32547765)
chr6 (126-235)||(29716761-29716871)
chr6 (125-186)||(34552549-34552610)
chr6 (144-188)||(34552221-34552265)
chr6 (122-235)||(6586414-6586527)
chr6 (122-190)||(12226696-12226765)
chr6 (136-236)||(21130706-21130807)
chr6 (122-211)||(30509312-30509401)
chr6 (358-415)||(31597543-31597600)
[»] scaffold0010 (1 HSPs)
scaffold0010 (122-217)||(26697-26792)
[»] scaffold0495 (1 HSPs)
scaffold0495 (320-476)||(5027-5182)
[»] scaffold0037 (1 HSPs)
scaffold0037 (136-236)||(35273-35372)
[»] scaffold0236 (1 HSPs)
scaffold0236 (137-236)||(19578-19677)
[»] scaffold0564 (1 HSPs)
scaffold0564 (348-420)||(3979-4051)
[»] scaffold0316 (1 HSPs)
scaffold0316 (348-420)||(3278-3350)
[»] scaffold0053 (1 HSPs)
scaffold0053 (122-180)||(5758-5816)
[»] scaffold0019 (1 HSPs)
scaffold0019 (352-408)||(48415-48470)
[»] scaffold0392 (1 HSPs)
scaffold0392 (376-438)||(13687-13749)
[»] scaffold0066 (1 HSPs)
scaffold0066 (390-459)||(34399-34468)


Alignment Details
Target: chr2 (Bit Score: 409; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 368 - 874
Target Start/End: Complemental strand, 9049015 - 9048511
Alignment:
Q  368 acattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaactattactctgagggcactggtgagcaaga 467  Q
    ||||| || |||||||||||||| ||||||||||||||||||| ||||||||   |||||||||| ||||  ||| || |||||||  |||| | |||||    
T  9049015 acattgaaggtttaaaaagtaatcttttctacataaaatttattaattatttttatttttaaatctttaatcattgctatgagggc--tggttaacaaga 9048918  T
Q  468 tccttaaaagaaacacaagatgacaaagagataataggagggtaggtgttgcaaagaacaaggtcggcaaaagtaagggcttcgatttaagcgaaggagg 567  Q
     |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9048917 cccttgaaa-aaacacaagatgacaaagagataatagtagggtaggtgttgcaaagaacaaggtcggcaaaagtaagggcttcgatttaagcgaaggagg 9048819  T
Q  568 cagaacaaataaactccactattcaatttgacacttgactccaaaatctctttttccttggacttcgaggtgtacccatttt-atttattctttctatga 666  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9048818 cagaacaaataaactccactattcaatttgacacttgactccaaaatctctttttccttggacttcgaggtgtacccatttttatttattctttctatga 9048719  T
Q  667 tactctttcaaatttcaacatcacttccaccgcttttactacatttttcccttttataataacttactatgaattttagcataatttctttccattattt 766  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9048718 tactctttcaaatttcaacatcacttccaccgcttttactacatttttcccttttataatcacttactatgaattttagcataatttctttccattattt 9048619  T
Q  767 tgctttcggcttttgttcggttcttgtgaaaggattagtcgtttttataaaactttatgcataacgcacacccaagtcacccatccaataatcacaagat 866  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9048618 tgctttcggcttttgttcggttcttgtgaaaggattagtcgtttttataaaactttatgcataacgcacacccaagtcacccatccaataatcacaagat 9048519  T
Q  867 tcacaaca 874  Q
    ||||||||    
T  9048518 tcacaaca 9048511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 8 - 290
Target Start/End: Complemental strand, 9049373 - 9049092
Alignment:
Q  8 accacaatattcatcaccctaatgagtttatagatcgagtcaccagatgaagttaaattcactaggaaccacctcttgaaggtgcttatgaagttaatgc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  9049373 accacaatattcatcaccctaatgagtttatagatcgagtcaccagatgaagttaaattcactaggaacc-cctcttgaaggtgcttatgaagttaatgt 9049275  T
Q  108 tgataaatgatataactctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaattttta 207  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | || ||| |||||||||    
T  9049274 tgataaatgatatgattgtttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaattttta 9049175  T
Q  208 taaaaagttattatttaaggtccttaactcgagcactagttaacatttcccaacttttaatttggttaggattatttgtcatt 290  Q
    ||||||||||||||||||||| |||||  |||||| |||||||||||| ||| |||||||||| |||||||||||||||||||    
T  9049174 taaaaagttattatttaaggttcttaatccgagcattagttaacattttccatcttttaatttagttaggattatttgtcatt 9049092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 903 - 1036
Target Start/End: Complemental strand, 9048282 - 9048149
Alignment:
Q  903 attttatatatactgtgatctttttgacatgcatgatattgatattcatcattcatgtatgtatgttctctctagaggcggcaaacgggagaatcctctt 1002  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9048282 attttatatatactgtgatctttttgacatgcatgatattgatattcatcattcatgtatgtatgttctctctagaggcggcaaacgggagaattctctt 9048183  T
Q  1003 agagactatataagttgtaacttgtaattcacac 1036  Q
    ||||||||||||||||||||||||||||||||||    
T  9048182 agagactatataagttgtaacttgtaattcacac 9048149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 320 - 459
Target Start/End: Complemental strand, 41284711 - 41284572
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| ||||||||  ||||| | ||||  ||||||||||||||| ||| | |||||||||||||||| | |||||||||||||||||| ||||||||    
T  41284711 ttaagaagtctaaaaaaaaagttttgtcttagaaatgatgcattcaagacactgaaagtttaaaaagtaacactttctacataaaatttataaattattt 41284612  T
Q  420 ccgtttttaaatccttaactattactctgagggcactggt 459  Q
    |  |||||||||||||||| |||  || |||| |||||||    
T  41284611 ctatttttaaatccttaaccattgttccgaggacactggt 41284572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 6411480 - 6411370
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    ||||| |||| ||||| ||||||||||||||||||||| | ||| |||||||||| ||||| |||||| ||| | | |||||||||||||||||||||||    
T  6411480 tttaaacatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgtactgattacacatacttttataaaaagttattatttaa 6411381  T
Q  226 ggtccttaact 236  Q
    ||| |||||||    
T  6411380 ggttcttaact 6411370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33634908 - 33634796
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||| |||||||||||| ||||||||| |||||||| | ||| |||||||||| ||||| ||||||  || || |||||||||||||||| |||    
T  33634908 actctttaaggatgttaaattaaataattattcgtttaaaatatgaaagttttcaatttccaatgtactgattgcacaactttttataaaaagttactat 33634809  T
Q  222 ttaaggtccttaa 234  Q
    |||| ||||||||    
T  33634808 ttaaagtccttaa 33634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 12880083 - 12880198
Alignment:
Q  323 agaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccg 422  Q
    ||||||||||| |||||||| | ||||| ||| | || |||||| ||||| ||| ||||||||||||| |||||||||||||| |||| ||||||||||     
T  12880083 agaaatctaaagaggaagttttatcttggaaacggtgtattcaacacattgaaattttaaaaagtaattttttctacataaaacttatcaattatttcca 12880182  T
Q  423 tttttaaatccttaac 438  Q
    ||||| ||||||||||    
T  12880183 tttttgaatccttaac 12880198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 12848582 - 12848468
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||||||| ||||||||||||| |||||||| | ||||| ||| |||||||||| || |||||| || ||| ||| ||| |||||||||| | ||    
T  12848582 actctttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaattacacaaactttcataaaaagttgtcat 12848483  T
Q  222 ttaaggtccttaact 236  Q
    |||||||||||||||    
T  12848482 ttaaggtccttaact 12848468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 29685814 - 29685700
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| |||| ||||| ||||||||||||||| ||||| | ||| || ||||||||||| |||| ||| ||| |||||||| ||||||||||||||    
T  29685814 actctttaaacatgctaaataaagtaattattctttcaaaatttaaaagttctcaattttcaacgcaccgattacacaaatttttgtaaaaagttattat 29685715  T
Q  222 ttaaggtccttaact 236  Q
    || || |||||||||    
T  29685714 tttagatccttaact 29685700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 24389733 - 24389638
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||| |||||| ||||| ||| ||| ||| |||| ||||||    
T  24389733 actctttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgctgattacacaaactttcataagaagtta 24389638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 6084012 - 6083911
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||  |||||| |||||||||| ||||||||| | ||| ||||||||||||||||  ||||| ||| ||| |||||||||||||||| ||    
T  6084012 actctttaagcatactaaatttagtaattattattttaaaatatcaaagttttcaattttcaatgtgctgattacacaaacttttataaaaagttatcat 6083913  T
Q  222 tt 223  Q
    ||    
T  6083912 tt 6083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 21277549 - 21277661
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||| || |||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||| |||  || ||||||||||  |||  ||    
T  21277549 actctttaagtattttaaattaagtaattatttttttaaaatgtcaaacttttcaa-ttgcaatgcactgattacagtaacttttataaaagtttaccat 21277647  T
Q  222 ttaaggtccttaac 235  Q
    ||||| ||||||||    
T  21277648 ttaagatccttaac 21277661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 3666534 - 3666434
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||||||||||||||||||| ||||| ||||| |||| |||| ||||| || |||| ||||||| ||| ||||||| |||||||||||| || |||||    
T  3666534 ttaaattaagtaattattctttaaaaatattaaaatttttaattctcaatacattgattacataaactttcataaaaaattattatttaagatctttaac 3666435  T
Q  236 t 236  Q
    |    
T  3666434 t 3666434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 33454964 - 33455068
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||||||| || |||||||| ||||||| ||| |||||||||| |||| || |||| ||| || |||| ||||||||||| |||    
T  33454964 actctttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattacacaacttttcataaaaagttactat 33455063  T
Q  222 ttaag 226  Q
    |||||    
T  33455064 ttaag 33455068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 44838627 - 44838727
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttat-aaaaagttattatttaaggtccttaac 235  Q
    ||||| ||||||||||||||||||||| | |||   ||||||||||||| || |||| ||| ||| |||||| |||||||||||||||||||||||||||    
T  44838627 taaataaagtaattattcttttaaaatttaaaaaaattcaattttcaatacattgattacacaaacttttataaaaaagttattatttaaggtccttaac 44838726  T
Q  236 t 236  Q
    |    
T  44838727 t 44838727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 41311720 - 41311810
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||| ||||||| || | ||| ||||||||||||||||| ||||||||||||||||||| ||| |||| | ||||| ||||||||||    
T  41311720 ttgaaaattatgcatttaacaaattgaaagtttaaaaagtaattttttctacataaaatttataaatcatttacatttttgaatccttaac 41311810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 8086965 - 8087042
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| || ||| ||||||| |||||||||||    
T  8086965 ttaaattaaataattattttttaaaaatgttaaacttttcaatttttaatgtaccgataacataaacttttataaaaa 8087042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 12762981 - 12762912
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactg 191  Q
    ||||||||||||| | |||||||||||||||||||  ||||||||||| |||||||||| ||||||||||    
T  12762981 actctttaagcatttaaaattaagtaattattcttaaaaaatgttaaaattttcaatttccaatgcactg 12762912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 4655071 - 4654980
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    |||||||||||||| |||||||  |||||||| ||||||||| | ||| ||||||||||||||||||| ||| ||| ||| |||| ||||||    
T  4655071 actctttaagcatgctaaattagataattatttttttaaaatatcaaagttttcaattttcaatgcaccgattacacaaacttttgtaaaaa 4654980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 6334782 - 6334679
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| |||| ||||||||  ||||||| ||| ||||||| ||| |||||||||| ||||||| |||| | ||||| |||| ||||||||||| ||    
T  6334782 actctttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgattatataaacttttgtaaaaagttatcat 6334683  T
Q  222 ttaa 225  Q
    ||||    
T  6334682 ttaa 6334679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 33068638 - 33068540
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    ||||||||||||||||| ||| ||||||| ||| ||||||||||  ||||||||||| | | ||| ||| ||||||||||| | |||| ||||||||||    
T  33068638 taaattaagtaattattttttaaaaatgtgaaagttttcaatttctaatgcactgattatacaaactttcataaaaagttactttttatggtccttaac 33068540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 3074076 - 3074148
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaa-cttttcaattttcaatgcactgat 193  Q
    |||||||||||||| |||||||||||||||||| |||||||| | |||  |||||||||| ||||||||||||    
T  3074076 actctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgat 3074148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 3191170 - 3191285
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    ||||||||| |||||| ||||| ||||| ||||| ||||||||||||| |||| |||| | | ||| ||||||||||| |||| ||||||  || |||||    
T  3191170 ttaaattaaataattagtctttaaaaatattaaatttttcaattttcattgcattgattatacaaacttttataaaaatttatcatttaaaatctttaac 3191269  T
Q  236 tcgagcactagttaaca 252  Q
    | | |||||||||||||    
T  3191270 t-gcgcactagttaaca 3191285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 8964392 - 8964500
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||  ||||||||||||||||||||| |||| || |||  ||||||||| ||||||| |||| ||| ||||||| ||||| | ||||||  ||     
T  8964392 tttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaatacttattacatat 8964491  T
Q  226 ggtccttaa 234  Q
    |||||||||    
T  8964492 ggtccttaa 8964500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 565804 - 565690
Alignment:
Q  122 actctttaagcatgttaaattaagtaat--tattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttatt 219  Q
    |||||||||||||| ||||||||||||   |||||||| ||||||| ||| |||||||||| | ||||||| || ||| ||| ||| ||||||||||| |    
T  565804 actctttaagcatgctaaattaagtaaaagtattctttaaaaatgtgaaagttttcaatttcctatgcactaattacacaaactttcataaaaagttact 565705  T
Q  220 atttaaggtccttaa 234  Q
     |||| | |||||||    
T  565704 ttttatgatccttaa 565690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 4640207 - 4640298
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaa 437  Q
    |||||| |||||||||||||| || || ||| |||||||||| |  |||||||| ||||| |||| |||||||| | |||||||||||||||    
T  4640207 tcttgagaatgatgcattcaacacgttgaaaatttaaaaagttactttttctacgtaaaacttataaattattttcatttttaaatccttaa 4640298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 431726 - 431676
Alignment:
Q  140 attaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  431726 attaagtaattattctttaaaaatgttaaaattttcaatttccaatgcact 431676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 32838721 - 32838627
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    ||||| |||||||||||||||  |||| ||| ||||||| |||| ||||||||  |||||||||| |||||||| | |||||  |||||||||||    
T  32838721 tcttggaaatgatgcattcaatgcattgaaactttaaaatgtaacattttctatttaaaatttatcaattattttcatttttgtatccttaacta 32838627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 37284996 - 37284930
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    |||||||||  || |||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  37284996 actctttaaatattttaaattaagtaattattttttaaaaatcttaaatttttcaattttcaatgca 37284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 40874811 - 40874925
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaac-ttttcaattttcaatgcactgatcacataaatttttataaaaagttatta 220  Q
    ||||||||| | | |||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||| ||  ||  || ||| ||||||  ||| ||    
T  40874811 actctttaaactttttaaattaagtaattattttttaaaaatgttaaactttttcaattttcaacgcactaatggcactaactttcataaaagtttacta 40874910  T
Q  221 tttaaggtccttaac 235  Q
    ||||| |||||||||    
T  40874911 tttaaagtccttaac 40874925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 9448466 - 9448522
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    ||||||||||| ||||| ||| ||| ||| |||||||||||||||||||||||||||    
T  9448466 taaattaagtagttattttttaaaactgtcaaacttttcaattttcaatgcactgat 9448522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 30869670 - 30869589
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttt 205  Q
    |||||||||||||| |||||||| |  ||||||||| ||||||||||| ||||||||||  ||| ||||||| ||| |||||||    
T  30869670 actctttaagcatgctaaattaaat--ttattctttaaaaatgttaaagttttcaatttctaatacactgataacacaaatttt 30869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 32066740 - 32066832
Alignment:
Q  144 agtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    |||||||||| |||| |||||| ||| |||| |||||  |||| ||| || ||| ||| ||| |||||||||||| |||||||||||||||||    
T  32066740 agtaattattttttttaaatgtcaaagtttttaatttctaatgtactaattacacaaactttcataaaaagttataatttaaggtccttaact 32066832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 33963036 - 33962941
Alignment:
Q  139 aattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    ||||||| ||||||||||| |||| ||| |||  |||||||||||||||| |||   || || |||| ||||||| ||||||||||| ||||||||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaatttattatttaaagtccttaa 33962941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 42342581 - 42342487
Alignment:
Q  140 attaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    ||||| |||||||||||| ||||||| ||| ||||||||||| ||| ||||||| | | ||||||| |||||||||||  ||||||  ||||||||    
T  42342581 attaaataattattctttaaaaatgtcaaaattttcaatttt-aatacactgattaaacaaattttcataaaaagttaccatttaatatccttaac 42342487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 30822830 - 30822764
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    |||||| |||| | |||||||||||||||||| ||| ||||||| ||| |||||||||| |||||||    
T  30822830 actcttaaagctttttaaattaagtaattattttttgaaaatgtcaaagttttcaatttccaatgca 30822764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 419
Target Start/End: Complemental strand, 19002838 - 19002765
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||| ||||| |||||||||  |||| ||| ||||||||||||  |||||||| |||||||||| ||||||||    
T  19002838 tcttggaaatggtgcattcaatgcattgaaattttaaaaagtaaatttttctacttaaaatttatcaattattt 19002765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 27692822 - 27692745
Alignment:
Q  141 ttaagtaattattcttttaaaatgttaaactttt-caattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    ||||||||||||| |||| |||||| ||  |||| |||||| ||||||| | || |||||||||||||||||||||||    
T  27692822 ttaagtaattattttttttaaatgtaaatgtttttcaatttccaatgcatttattacataaatttttataaaaagtta 27692745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 3272423 - 3272363
Alignment:
Q  378 tttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||| |||  |||||| |||||||||||  |||||||||| ||||||||||||||||    
T  3272423 tttaaaaaataactttttcttcataaaatttaccaattatttccatttttaaatccttaac 3272363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 14295640 - 14295715
Alignment:
Q  138 aaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||| ||||||||||||||||||| |||||   || |||||||||||||| |||  ||| || ||||||||||||    
T  14295640 aaatttagtaattattcttttaaaaggttaactattacaattttcaatgcattgaatacacaactttttataaaaa 14295715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 437
Target Start/End: Complemental strand, 40462172 - 40462081
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaa 437  Q
    |||||| ||||||  |||||| | |||| || ||||||||||||| |||||||||||||| |||| ||||  |||  |||||||||| ||||    
T  40462172 tcttgagaatgatatattcaagatattagaaatttaaaaagtaattttttctacataaaacttataaattgcttctatttttaaatctttaa 40462081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 44195503 - 44195598
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    ||||||||||||| |||||||||| |||||||||||  ||| ||||||   |||||||| ||||||| | |  ||| |  ||||||||||||||||    
T  44195503 actctttaagcattttaaattaagaaattattctttacaaaagttaaataattcaatttacaatgcattaaatacacatgtttttataaaaagtta 44195598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 752232 - 752182
Alignment:
Q  355 tgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaa 405  Q
    |||||||||||| ||||| ||| || |||||||||| ||||||||||||||    
T  752232 tgatgcattcaacacattgaaacttgaaaaagtaattttttctacataaaa 752182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 15806101 - 15806055
Alignment:
Q  171 ttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    |||||||||||||||||| |||| ||| ||| |||||||||||||||    
T  15806101 ttttcaattttcaatgcattgattacacaaacttttataaaaagtta 15806055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 30523013 - 30523111
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    ||||||||| ||||| |||||| | ||||| ||| |||||||||| ||||| ||| || ||| ||| ||| |||||||||||  || |||||| |||||    
T  30523013 ttaaattaaataatttttctttaacaatgtcaaagttttcaatttccaatgtactaattacacaaactttcataaaaagttaccatctaaggtacttaa 30523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 13197296 - 13197349
Alignment:
Q  172 tttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||| |||||| | || ||||||||||||||||||| |||| ||||||    
T  13197296 tttcaatttttaatgcattaattacataaatttttataaaaaattatcatttaa 13197349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 28858102 - 28858162
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaat 185  Q
    |||||||||||  |||||||||||| |||||||| ||||||| ||| |||| ||||||||||    
T  28858102 tctttaagcattctaaattaagtaaatattctttaaaaatgtcaaa-tttttaattttcaat 28858162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 40867915 - 40867980
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaa 385  Q
    ||||||| | |||||| |||||| | |||| ||||||||| |||||| ||||| ||||||||||||    
T  40867915 ttaagaagtttaaaaatgaagttttgtctttaaaatgatgtattcaacacattgaaagtttaaaaa 40867980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 1e-43; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 319 - 473
Target Start/End: Complemental strand, 26683754 - 26683600
Alignment:
Q  319 attaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatt 418  Q
    |||||||| ||||||| ||||||| | |||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||||    
T  26683754 attaagaagtctaaaagggaagttttgtcttgaaaataatgcattcaagacattgaaaatttaaaaagtaatattttctacataaaatttataaattatt 26683655  T
Q  419 tccgtttttaaatccttaactattactctgagggcactggtgagcaagatcctta 473  Q
    ||| |||||||||||||||| |||||  |||||||| |||| ||||||| |||||    
T  26683654 tccatttttaaatccttaaccattaccatgagggcattggttagcaagaccctta 26683600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 320 - 472
Target Start/End: Complemental strand, 14193963 - 14193811
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| | ||||||||||||| | ||| | ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  14193963 ttaagaagtttaaaaaggaagttttatctcggaaatgatgcattcaagacattgaaagtttaaaaagtaacattttctacataaaatttataaattattt 14193864  T
Q  420 ccgtttttaaatccttaactattactctgagggcactggtgagcaagatcctt 472  Q
       ||||||||| |||||| ||| | ||||||||| |||| ||||||| ||||    
T  14193863 ttatttttaaattcttaaccattgccctgagggcattggttagcaagaccctt 14193811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 53261554 - 53261667
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||||||||||||||||||| ||||| | ||| |||||||||| ||||||| |||| ||| ||| ||||||||||||||| |||    
T  53261554 actctttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattacacaaacttttataaaaagttactat 53261653  T
Q  222 ttaaggtccttaac 235  Q
    |||| |||||||||    
T  53261654 ttaaagtccttaac 53261667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 49951800 - 49951716
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaattttt 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| ||| ||||||||    
T  49951800 actctttaagcatgctaaattaagtaattattcttttaaaatgtcaaagttttcaattttcaatgcaccgattacacaaattttt 49951716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 38868837 - 38868936
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    |||||||||||||| ||||| || | |||||  |||||||||||||| ||||| ||||||||||||||||  |||||||||||||| |||| ||||||||    
T  38868837 ttaagaaatctaaagaggaaattttgtcttgggaatgatgcattcaacacattgaaagtttaaaaagtaactttttctacataaaacttataaattattt 38868936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 36876165 - 36876072
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||  |||||||||| |||| || |||| ||| ||| |||||||||||||||    
T  36876165 tctttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgattacacaaacttttataaaaagtta 36876072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 45743315 - 45743424
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||| ||||||||||||| ||||||||||| ||||||| ||| ||||||||||||||| || |||| ||| || |||| ||||| ||||| |||||||    
T  45743315 tttaagtatgttaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatacagtgattacacaacttttcataaagagttactatttaa 45743414  T
Q  226 ggtccttaac 235  Q
    |  |||||||    
T  45743415 gacccttaac 45743424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 52650800 - 52650696
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| |||| ||||||||| |||||||||||  |||||| ||| ||||||||||||||| ||||||| ||| || |||| ||||||| ||| |||    
T  52650800 actctttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcactgattacacaatttttcataaaaaattactat 52650701  T
Q  222 ttaag 226  Q
    |||||    
T  52650700 ttaag 52650696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 50617492 - 50617563
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  50617492 actctttaaacattataaattaagtaattatttttttaaaatgtcaaacttttcaatttttaatgcactgat 50617563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 320 - 467
Target Start/End: Complemental strand, 53333664 - 53333517
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| | ||||||| ||||||| | ||  |||| |||||||||| | ||||||||||||||||||||  |||||||||| |||||||| ||||||||    
T  53333664 ttaagaagtgtaaaaagaaagttctattttagaaataatgcattcaagatattaaaagtttaaaaagtaactttttctacatgaaatttataaattattt 53333565  T
Q  420 ccgtttttaaatccttaactattactctgagggcactggtgagcaaga 467  Q
       ||||||||| |||||| |||   |||||| || |||| |||||||    
T  53333564 ttatttttaaattcttaaccattgtcctgaggacattggttagcaaga 53333517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 40252652 - 40252764
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| ||| ||||||||||||||| || ||| ||||||||||| ||||||||||||||| || |||| |||  || ||| ||||||| ||| |||    
T  40252652 actctttaaacatattaaattaagtaattgttatttaaaaatgttaaagttttcaattttcaatacattgattaca-caactttcataaaaatttactat 40252750  T
Q  222 ttaaggtccttaac 235  Q
    |||| |||||||||    
T  40252751 ttaaagtccttaac 40252764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 23136617 - 23136546
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    |||| ||||| || |||||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||    
T  23136617 actccttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgat 23136546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 31262912 - 31263018
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||  ||||||||||||||||| ||| ||||||| ||| ||||| ||||| |||| |||||  ||| ||| |||||||||||||| | ||    
T  31262912 actctttaagcattctaaattaagtaattatt-tttaaaaatgtcaaagttttcgattttgaatgtactgactacacaaacttttataaaaagttgtcat 31263010  T
Q  222 ttaaggtc 229  Q
    ||||||||    
T  31263011 ttaaggtc 31263018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 35153248 - 35153351
Alignment:
Q  123 ctctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattat 221  Q
    ||||||||  || ||||||||| | |||||||||| ||||||||||| ||||||||||||||||||| | ||  || ||| ||||||||||||||| |||    
T  35153248 ctctttaaatattttaaattaaatcattattctttaaaaatgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaagttactat 35153347  T
Q  222 ttaa 225  Q
    ||||    
T  35153348 ttaa 35153351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 49795141 - 49795254
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttat-aaaaagttatta 220  Q
    |||||||||||||  ||||| ||||||||||| ||||||| | | ||| ||||||||||||||||||| ||| ||| ||| |||||| ||||| ||| ||    
T  49795141 actctttaagcatactaaataaagtaattatttttttaaatt-taaaaattttcaattttcaatgcaccgattacacaaacttttataaaaaaattacta 49795239  T
Q  221 tttaaggtccttaac 235  Q
    ||||| |||||||||    
T  49795240 tttaaagtccttaac 49795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 4391979 - 4392067
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaact-tttcaattttcaatgcactgatcacataaatttttataaaaagttattattta 224  Q
    |||||| |||||||||||||| ||||||| |||   |||||||||||||| ||||||| ||| ||||||||||||||| |||| |||||    
T  4391979 taaatttagtaattattctttaaaaatgtcaaaaaatttcaattttcaatacactgattacacaaatttttataaaaatttatcattta 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 17970806 - 17970878
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaa-cttttcaattttcaatgcactgat 193  Q
    |||||||||||||| |||||||||||||||||| |||||||| | |||  |||||||||| ||||||||||||    
T  17970806 actctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgat 17970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 18939963 - 18939864
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||| |||| | |  |  || ||| ||||||||||||||||  ||||||||||||||||    
T  18939963 taaattaagtaattattctttaaaaaaattaaaattttcaatttttaatgtatttgttgcacaaacttttataaaaagttatcttttaaggtccttaact 18939864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 25042837 - 25042749
Alignment:
Q  125 ctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    ||||||||||| |||||||||||    |||||| ||||||||||| ||||||||||  |||| |||||| ||| ||| |||||||||||||||    
T  25042837 ctttaagcatgctaaattaagta----ttctttaaaaatgttaaaattttcaatttctaatgtactgattacacaaacttttataaaaagtta 25042749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 439
Target Start/End: Original strand, 24970939 - 24971069
Alignment:
Q  309 taaggcattaattaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaattt 408  Q
    |||||||||  ||||||| | |||| ||||| || | |||||||||||||| ||| |  ||||| ||||||||||||||||  |||||| ||| ||||||    
T  24970939 taaggcatttgttaagaagtttaaagaggaaattttgtcttgaaaatgatgtattaagcacattgaaagtttaaaaagtaaccttttctgcatgaaattt 24971038  T
Q  409 atgaattatttccgtttttaaatccttaact 439  Q
     | ||||| |||  ||||| |||||||||||    
T  24971039 gtaaattacttctatttttgaatccttaact 24971069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 22889271 - 22889392
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    |||||||||||||| || ||| ||||||||||| |||||||||||||||||||   | ||   || ||| ||||||  |||| |||||||||| |||||     
T  22889271 taaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttatcatttaaggtcattaacg 22889370  T
Q  237 cgagcactagttaacatttccc 258  Q
     | || ||||||||||||||||    
T  22889371 agtgccctagttaacatttccc 22889392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 22940935 - 22941056
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    |||||||||||||| || ||| ||||||||||| |||||||||||||||||||   | ||   || ||| ||||||  |||| |||||||||| |||||     
T  22940935 taaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttatcatttaaggtcattaacg 22941034  T
Q  237 cgagcactagttaacatttccc 258  Q
     | || ||||||||||||||||    
T  22941035 agtgccctagttaacatttccc 22941056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 27963225 - 27963156
Alignment:
Q  122 actctttaagcatgttaaa-ttaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    ||||||||  ||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||| ||||    
T  27963225 actctttacacatgttaaaattaaataattattcttttaaaatattaaaattttcaattttcaatacact 27963156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 19597256 - 19597156
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||  || |||| | ||||||||||| ||||||| |||   ||||||||  |||||| |||  |||||||||||||||||| ||||||||||||    
T  19597256 tttaagcattctacattaggaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaatacataaatttttataaaatgttattatttaa 19597157  T
Q  226 g 226  Q
    |    
T  19597156 g 19597156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 37461582 - 37461492
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||| |||| |||||||||||||||   ||||||||||| ||| ||||||||||| ||||||| ||| ||| ||| ||| |||||||    
T  37461582 actctttaaacatgctaaattaagtaattaaa-ttttaaaatgtcaaagttttcaatttttaatgcaccgattacacaaactttcataaaaa 37461492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 53622299 - 53622414
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttatta 220  Q
    ||||||||| ||| ||||||||||||||| || ||||||||||| ||| |||||||||| ||   ||| | || ||| ||||||| | |||||||||| |    
T  53622299 actctttaaacatcttaaattaagtaattttttttttaaaatgtcaaaattttcaatttccagctcactttattacacaaattttcagaaaaagttatca 53622398  T
Q  221 tttaaggtccttaact 236  Q
    ||||| || |||||||    
T  53622399 tttaaagttcttaact 53622414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 2818355 - 2818421
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    ||||||||||||| |||||||||| |||||||||||||||| || |||   |||||||| |||||||    
T  2818355 actctttaagcattttaaattaagaaattattcttttaaaaggtcaaaaagttcaatttccaatgca 2818421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 346 - 420
Target Start/End: Original strand, 31557462 - 31557536
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||| | |||||| || ||| ||||  ||||||||    
T  31557462 tcttgaaaatgatgctttcaacacattaaacgtttaaaaagtaacaatttctatatgaaacttatagattatttc 31557536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 34015996 - 34015938
Alignment:
Q  374 aaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatc 432  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||   ||||||||||    
T  34015996 aaagttaaaaaaataatattttctacataaaatttataaattatttatatttttaaatc 34015938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 38547554 - 38547460
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||||| | ||| |||||| ||||| |||  |||||||||| | ||||  ||||||||||||| |||||||||  |||||||||| |||||||    
T  38547554 tcttgaaagttatgtattcaacacattgaaatattaaaaagtagtttttttaacataaaatttatcaattatttctttttttaaatctttaacta 38547460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 38682096 - 38681987
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattattta 224  Q
    ||||| ||| |||| ||||||||||| ||||| ||| ||||||| ||||||||||||||| ||| | || ||| ||  ||||||||||| || |||||||    
T  38682096 tttaaacattttaagttaagtaattaatctttaaaattgttaaagttttcaattttcaatacactttattacacaagcttttataaaaa-ttgttattta 38681998  T
Q  225 aggtccttaac 235  Q
    | |||||||||    
T  38681997 aagtccttaac 38681987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 50343948 - 50343882
Alignment:
Q  120 taactctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatg 186  Q
    ||||||||||||||| ||||| |||||||||||||||| |||| || |||  ||| |||||||||||    
T  50343948 taactctttaagcattttaaaataagtaattattctttaaaaaagtcaaatattttaattttcaatg 50343882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 47937859 - 47937968
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| |||  ||||||| ||||||||||||| |||| || ||| |||||||||||| |||| ||| |  || ||| ||| ||||||| |||| ||    
T  47937859 actctttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattttctatgctctgtttgcacaaactttcataaaaaattatcat 47937958  T
Q  222 ttaaggtcct 231  Q
    ||||| ||||    
T  47937959 ttaagatcct 47937968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 48051730 - 48051787
Alignment:
Q  381 aaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||||  ||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  48051730 aaaaagtaactttttctacataaaatttatcaattatttctatttttgaatccttaac 48051787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 21241123 - 21241191
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    ||||||||| |||||||||||||| ||| ||| ||| ||||| | ||| |||||||||| |||||||||    
T  21241123 actctttaaacatgttaaattaagaaatgattttttaaaaatatcaaaattttcaatttccaatgcact 21241191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 38354592 - 38354520
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattctttt-aaaatgttaaacttttcaattttcaatgcactgat 193  Q
    ||||||||| | | |||||||||||||||||| |||| ||||||| ||||||||||||||  ||| |||||||    
T  38354592 actctttaaaccttttaaattaagtaattatttttttaaaaatgtcaaacttttcaatttctaatacactgat 38354520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 40173588 - 40173524
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatg 186  Q
    ||||||||| |||  ||||||||||||| |||| || ||||||||||| |||| |||||||||||    
T  40173588 actctttaaacattctaaattaagtaatcattcattaaaaatgttaaagtttttaattttcaatg 40173524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 41370262 - 41370166
Alignment:
Q  138 aaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    |||||||| |||||||  |  |||| ||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| ||| |||| || ||||||||    
T  41370262 aaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattttcataaaaacttactattcaaagtccttaa 41370166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 7852654 - 7852588
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    |||||||||||||  |||||| |||||||||||||||||||  ||||   || ||||||||||||||    
T  7852654 actctttaagcatcctaaatttagtaattattcttttaaaaaattaactattacaattttcaatgca 7852588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 47995847 - 47995781
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    |||||||||||||  |||||| |||||||| |||||||||| |||||   || ||||||||||||||    
T  47995847 actctttaagcattctaaatttagtaattactcttttaaaaagttaattattacaattttcaatgca 47995781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 49623052 - 49622998
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattt 180  Q
    ||||||||| |||||||||||||||||||  | ||||||| ||| ||||||||||    
T  49623052 tttaagcattttaaattaagtaattattccataaaaatgtcaaaattttcaattt 49622998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 46570633 - 46570576
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaatttt 181  Q
    ||||||| ||| ||||||||||| |||| ||||| ||||||||||| |||| ||||||    
T  46570633 tctttaaacattttaaattaagttattactctttaaaaatgttaaagtttttaatttt 46570576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 8e-33; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 320 - 476
Target Start/End: Original strand, 6539796 - 6539952
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| | |||||| |||||| | | ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||| ||||||||    
T  6539796 ttaagaagtttaaaaatgaagttttgttttgaaaatgatgcattcaagacattgaaagtttaaaaagtaacattttctacataaaacttataaattattt 6539895  T
Q  420 ccgtttttaaatccttaactattactctgagggcactggtgagcaagatccttaaaa 476  Q
    |  ||||||||| |||||| ||| | ||||||||| |||| ||||||| || |||||    
T  6539896 ctatttttaaattcttaaccattgccctgagggcattggttagcaagacccataaaa 6539952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 332 - 467
Target Start/End: Original strand, 4462568 - 4462703
Alignment:
Q  332 aaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaat 431  Q
    ||||||||||| | ||||| ||||||||||||||| | ||| |||||||||||||||| ||||||||||||||| |||| |||||||||  |||||||||    
T  4462568 aaaaggaagttttgtcttggaaatgatgcattcaagatattgaaagtttaaaaagtaacattttctacataaaacttataaattatttctatttttaaat 4462667  T
Q  432 ccttaactattactctgagggcactggtgagcaaga 467  Q
     |||||| ||| | ||||||||| |||| |||||||    
T  4462668 tcttaaccattgccctgagggcattggttagcaaga 4462703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 27325917 - 27325820
Alignment:
Q  139 aattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| | |||| ||||||| |||||| |||| |||||||||||||||||    
T  27325917 aattaggtaattattctttaaaaatgtcaaacttttcaattttcaatgcactggttacattaatttttgtaaaaatttatcatttaaggtccttaact 27325820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 38595037 - 38594928
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||| | || | ||||||||| ||||||| |||| ||||||    
T  38595037 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcattaattatataaattttcataaaaatttatcatttaa 38594938  T
Q  226 ggtccttaac 235  Q
     |||||||||    
T  38594937 agtccttaac 38594928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 26453748 - 26453639
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    ||||||| ||| |||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| ||| | ||| ||||||||||||||  |||  ||||    
T  26453748 tctttaaacattttaaattaagtaat-attttttaaaaatgtcaaacttttcaattttcaatgcgctggttacacaaatttttataaaagtttaccattt 26453650  T
Q  224 aaggtccttaa 234  Q
    |||||||||||    
T  26453649 aaggtccttaa 26453639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 21259523 - 21259415
Alignment:
Q  127 ttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaag 226  Q
    ||||| ||||||||||||  ||||||||||| || |||| ||| |||| |||||||||||||||||| ||| ||| ||  |||||||||||| |||||||    
T  21259523 ttaagaatgttaaattaaaaaattattctttaaagatgtcaaaatttttaattttcaatgcactgattacacaaacttccataaaaagttatcatttaag 21259424  T
Q  227 gtccttaac 235  Q
    ||| |||||    
T  21259423 gtctttaac 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 26432261 - 26432372
Alignment:
Q  125 ctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattta 224  Q
    |||||||||| |||||||||||||||||| |||||||||  ||||||||||||||| ||||| |||||| |||  || ||| ||||||| |||  ||||     
T  26432261 ctttaagcattttaaattaagtaattatttttttaaaataataaacttttcaatttccaatgtactgattacactaactttcataaaaatttaccatttt 26432360  T
Q  225 aggtccttaact 236  Q
    |||| |||||||    
T  26432361 aggttcttaact 26432372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 10228315 - 10228448
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||| | ||||||||||||||| ||||| | ||| |||||||||| | |||||||| | ||| ||| |||| |||||||||| |||    
T  10228315 actctttaagcatgctaa-taaagtaattattctttcaaaatttaaaagttttcaatttccgatgcactggttacacaaacttttttaaaaagttactat 10228413  T
Q  222 ttaaggtccttaactcgagcactagttaacatttc 256  Q
    |||| ||| |||| | |  ||||||||||||||||    
T  10228414 ttaatgtctttaattaggacactagttaacatttc 10228448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 22601785 - 22601885
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||||||||||||||| ||| ||||| | ||| |||| ||||||||||  |||||| | | ||||||||||||||| |||| |||||||||| |||||    
T  22601785 ttaaattaagtaattattttttaaaaatatcaaaatttttaattttcaataaactgattatacaaatttttataaaaatttatcatttaaggtctttaac 22601884  T
Q  236 t 236  Q
    |    
T  22601885 t 22601885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 346 - 476
Target Start/End: Original strand, 1863125 - 1863255
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaactattact 445  Q
    ||||| |||||||| |||||| ||||| ||||||||||||||||  || ||||||||||| || | |||||||||  | ||| |||||||||||| | |     
T  1863125 tcttggaaatgatgtattcaacacattgaaagtttaaaaagtaactttatctacataaaacttgtaaattatttctatatttgaatccttaactagtgcc 1863224  T
Q  446 ctgagggcactggtgagcaagatccttaaaa 476  Q
    || |||||| |||| | ||||| ||||||||    
T  1863225 ctaagggcattggtaaacaagacccttaaaa 1863255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 12221433 - 12221546
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| |||  ||||||||||| ||||||||| ||| ||| ||| |||| ||||||||||| |||||| |||||||||||  |||||  |  ||||    
T  12221433 actctttaaacatactaaattaagtagttattctttaaaattgtcaaagtttttaattttcaatgtactgattacataaattttcgtaaaatttatttat 12221532  T
Q  222 ttaaggtccttaac 235  Q
    |||| |||||||||    
T  12221533 ttaaagtccttaac 12221546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 14309195 - 14309106
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||||| |||||||||||| ||||||||| ||||| | ||| |||||||||| ||||||| | || ||| ||||||| |||||||    
T  14309195 tctttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattacacaaattttcataaaaa 14309106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 6662077 - 6662169
Alignment:
Q  346 tcttgaaaatgatgcattcaaa-acattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaa 437  Q
    |||||| ||||||||||||||| ||||| ||||||||| || |||  |||||||||| |||||||| |||||||||  ||||| |||||||||    
T  6662077 tcttgagaatgatgcattcaaacacattgaaagtttaataaataactttttctacatcaaatttataaattatttcaatttttgaatccttaa 6662169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 4695068 - 4695139
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    |||||||||||||| ||||||||  ||||||||||| ||||| ||||| |||| ||||| ||||||||||||    
T  4695068 actctttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgat 4695139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 26686752 - 26686661
Alignment:
Q  132 catgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||| |||||||||| ||  ||| ||| ||| ||| ||||||||||| |||||    
T  26686752 catgttaaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagttagtattt 26686661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 26956483 - 26956392
Alignment:
Q  132 catgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||| |||||||||| ||  ||| ||| ||| ||| ||||||||||| |||||    
T  26956483 catgttaaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagttagtattt 26956392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 41568775 - 41568708
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactg 191  Q
    |||||||||||  |||||||||| |||||||||  ||||||| ||| |||||||||||||||||||||    
T  41568775 tctttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaatgcactg 41568708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 16636721 - 16636659
Alignment:
Q  174 tcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||||||||||||||| || ||| ||| |||||||||||||||  |||||||||||||||||    
T  16636721 tcaattttcaatgcactaattacacaaacttttataaaaagttaccatttaaggtccttaact 16636659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 14688752 - 14688832
Alignment:
Q  352 aaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatc 432  Q
    ||||||| ||||||| ||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||   ||||||||||    
T  14688752 aaatgattcattcaacacattgaaagtttaaaaactaattttttttacataaaacttataaattatttttatttttaaatc 14688832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 17774388 - 17774279
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattattta 224  Q
    ||||||||| |||||| ||||||||||||||| ||||| | ||| |||||||||| |||| ||| | || ||| ||| ||| |||||||||||| |||||    
T  17774388 tttaagcattttaaatcaagtaattattctttaaaaatatcaaatttttcaatttccaatacactttattacacaaa-tttcataaaaagttatcattta 17774290  T
Q  225 aggtccttaac 235  Q
    | ||| |||||    
T  17774289 aagtcattaac 17774279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 28639570 - 28639660
Alignment:
Q  144 agtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattatttaaggtcctta 233  Q
    |||||||||||||| ||||||||||| ||||||  || |||||||| | || ||| ||| ||||||||||| || |||||||| |||||||    
T  28639570 agtaattattctttaaaaatgttaaagttttcagcttccaatgcactttattacacaaacttttataaaaaattgttatttaaagtcctta 28639660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 43000759 - 43000813
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||| ||||||||||||||| ||||||| ||| |||| |||||||||||||||    
T  43000759 ttaaataaagtaattattctttaaaaatgtcaaaatttttaattttcaatgcact 43000813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 438
Target Start/End: Complemental strand, 844822 - 844745
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||| ||||| |||  ||||||||||| ||||||  ||||||||| || |||| ||||| ||||||||||||||||    
T  844822 attcaacacattgaaacattaaaaagtaacattttcatcataaaattcatcaattgtttccatttttaaatccttaac 844745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 26449313 - 26449264
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttat 410  Q
    |||||||||||| ||| ||||||||| ||| |||||||||||||||||||    
T  26449313 attcaaaacattgaaactttaaaaagaaattttttctacataaaatttat 26449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 36609226 - 36609150
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    |||||||| |||||||||||  ||||| | ||| |||||||||||||||| ||| || ||| ||| |||||||||||    
T  36609226 taaattaaataattattcttcaaaaatatcaaagttttcaattttcaatgtactaattacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 438
Target Start/End: Original strand, 38328685 - 38328744
Alignment:
Q  379 ttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||||||  ||||  |||||||||| ||||||||||||| ||||| ||||||||||    
T  38328685 ttaaaaagtaacttttttaacataaaattcatgaattatttccttttttgaatccttaac 38328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 38370547 - 38370638
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaa 437  Q
    |||||||||||||||||| ||  |||| ||  ||| ||||||||  |||||||| |||||||||| |||||||||  || |||| |||||||    
T  38370547 tcttgaaaatgatgcattgaatgcatttaagtttttaaaagtaaatttttctacgtaaaatttatcaattatttctattcttaagtccttaa 38370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 39177678 - 39177768
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    |||||||||| ||| ||||| |||||||||| |||| ||||| | ||| |||||||||| |||| |||||||  || || ||||||||||||    
T  39177678 actctttaag-atgctaaataaagtaattatcctttcaaaatttaaaagttttcaatttccaatacactgattgcacaactttttataaaaa 39177768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 39335666 - 39335736
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    ||||||||| ||| ||||||||| |||||||||||| |||||| |||| |||| |||||| |||| ||||||    
T  39335666 actctttaaacattttaaattaaataattattctttaaaaatg-taaagtttttaatttttaatgtactgat 39335736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 18730394 - 18730432
Alignment:
Q  400 ataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  18730394 ataaaatttataaattatttccatttttaaatccttaac 18730432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 25767635 - 25767573
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaa 184  Q
    ||||||||||| | ||||||||| ||||  |||||| ||||||||||| | ||||||||||||    
T  25767635 actctttaagctttttaaattaaataatatttctttaaaaatgttaaagtgttcaattttcaa 25767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 34032200 - 34032142
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattt 180  Q
    |||||||||||||  |||| |||||||||||||||| |||| ||||||  |||||||||    
T  34032200 actctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaattt 34032142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 346 - 419
Target Start/End: Original strand, 9515545 - 9515617
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||| |||| ||||||||||  |||| ||| ||||||||||| | |||| |||||||||||||| ||||||||    
T  9515545 tcttggaaattatgcattcaatgcattgaaactttaaaaagtattttttt-tacataaaatttatcaattattt 9515617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 12448667 - 12448756
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    |||| ||||| || ||||| |||| ||||||||  | |||| ||||||  ||||||||||||||||| |||| ||| ||| |||||||||    
T  12448667 actccttaaggattttaaaataagaaattattcaataaaaaagttaaatatttcaattttcaatgcaatgattacacaaacttttataaa 12448756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 41916297 - 41916260
Alignment:
Q  196 cataaatttttataaaaagttattatttaaggtcctta 233  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  41916297 cataaatttgtataaaaacttattatttaaggtcctta 41916260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 42488619 - 42488672
Alignment:
Q  135 gttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    ||||||| |||||||||||||||| |||| | ||| ||||||||||| ||||||    
T  42488619 gttaaatcaagtaattattctttttaaatatcaaagttttcaatttttaatgca 42488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 1e-31; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 48551036 - 48551150
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||| ||| ||| || |||||||||||||||| |||    
T  48551036 actctttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcaccgattacacaattttttataaaaagttactat 48551135  T
Q  222 ttaaggtccttaact 236  Q
    || ||||||||||||    
T  48551136 ttgaggtccttaact 48551150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 45757925 - 45758037
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||| |||||||||||| ||| ||| ||| |||||||  ||||||    
T  45757925 actctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactgattacacaaactttcataaaaaaatattat 45758024  T
Q  222 ttaaggtccttaa 234  Q
    |||||||||||||    
T  45758025 ttaaggtccttaa 45758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 331 - 472
Target Start/End: Complemental strand, 36473223 - 36473082
Alignment:
Q  331 aaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaa 430  Q
    |||||||||||| | ||| | ||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||| |||||||||  ||||||||    
T  36473223 aaaaaggaagttttgtctaggaaatgatgcattcaagacattgaaagattaaaaagtaacattttctacataaaatttataaattatttctatttttaaa 36473124  T
Q  431 tccttaactattactctgagggcactggtgagcaagatcctt 472  Q
    | |||||| ||| | |||||||||  ||| ||||||| ||||    
T  36473123 ttcttaaccattgccctgagggcatcggttagcaagaccctt 36473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 12140145 - 12140255
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaa-tttttataaaaagttattattta 224  Q
    |||||||||| |||||||| |||||||||||||||||||| ||| |||||||||| ||||| |||||| | | ||| |||||||||||||||| ||||||    
T  12140145 tttaagcatgctaaattaaataattattcttttaaaatgtcaaagttttcaatttccaatgtactgattatacaaactttttataaaaagttactattta 12140244  T
Q  225 aggtccttaac 235  Q
    ||||| |||||    
T  12140245 aggtctttaac 12140255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 25317801 - 25317914
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| | ||| |||||||||| |||||||  ||| ||| ||| ||||||||||| ||| |||    
T  25317801 actcttcaagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatcgattacacaaacttttataaaaatttactat 25317900  T
Q  222 ttaaggtccttaac 235  Q
    ||||||||||||||    
T  25317901 ttaaggtccttaac 25317914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 37388403 - 37388511
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||  ||||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||| |||| ||| ||||||||||||||| ||||| |    
T  37388403 actctttaaatatgttaaattaagtaattattctttaaaaatgtgaaatttttcagttttcaatgcattgattacacaaatttttataaaaa-ttatttt 37388501  T
Q  222 ttaaggtcct 231  Q
    ||| ||||||    
T  37388502 ttatggtcct 37388511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 37708433 - 37708522
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    ||||||||||||| ||||| |||| ||||| ||||| |||| ||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  37708433 actctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgattacatgtatttttataaa 37708522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 54911199 - 54911292
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    ||||||| |||  |||||||| |||||||||||||||||||||||| |||| |||||||||| || |||| ||||||| ||| |||||||||||    
T  54911199 tctttaaacattctaaattaaataattattcttttaaaatgttaaagttttaaattttcaatacattgattacataaactttcataaaaagtta 54911292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 46725653 - 46725767
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttatta 220  Q
    |||||||||||||  ||||||||||| ||||| | | ||||||||||| ||||||||||||||||||| | || ||| ||||||||| |||||||| |||    
T  46725653 actctttaagcattctaaattaagtagttattttataaaaatgttaaaattttcaattttcaatgcactttattacacaaattttta-aaaaagttgtta 46725751  T
Q  221 tttaaggtccttaact 236  Q
    ||||| ||| ||||||    
T  46725752 tttaaagtcgttaact 46725767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 28692034 - 28691976
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattt 180  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  28692034 actctttaaacatattaaattaagtaattattcttttaaaatgttaaagttttcaattt 28691976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 346 - 420
Target Start/End: Complemental strand, 39818928 - 39818854
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||| ||||||||  ||||||||    
T  39818928 tcttgaaaatgatgctttcaacacattaaacgtttaaaaagtaacattttctacatgaaatttatagattatttc 39818854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 14146111 - 14146208
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    ||||||||||||||||| |||| |||||| ||| ||||||||||  ||||||||||| ||| ||| || |||||||| |||  |||||| ||||||||    
T  14146111 taaattaagtaattattttttttaaatgtcaaagttttcaatttctaatgcactgattacacaaacttctataaaaatttaccatttaaagtccttaa 14146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 346 - 438
Target Start/End: Original strand, 44720880 - 44720972
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||||||| |||||||||  |||||||| ||| ||||||||  ||||  ||||||||||||  |||||||||| |||||| |||||||||    
T  44720880 tcttgaaaatggtgcattcaatgcattaaaactttcaaaagtaactttttgaacataaaatttaccaattatttccatttttagatccttaac 44720972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 45584432 - 45584343
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    |||||||||||||||||||||||||||||||||||||| |  || |||| ||||||||||  | |||| ||| ||| ||| |||||||||||    
T  45584432 tttaagcatgttaaattaagtaattattcttttaaaatat--aagtttttaattttcaatatattgattacacaaactttcataaaaagtta 45584343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 440
Target Start/End: Complemental strand, 29577326 - 29577267
Alignment:
Q  381 aaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||||    
T  29577326 aaaaagtaattttttctacataaaatttagcaattgtttccttttttaaatccttaacta 29577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 37359467 - 37359530
Alignment:
Q  127 ttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||    
T  37359467 ttaagcattttaaattaagtaattattccataaaaatgttaaagttttcaattttcaattcact 37359530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 24313547 - 24313661
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca-ctgatcacataaatttttataaaaagttatta 220  Q
    ||||||||| |||  ||||||||  ||||||||||| ||||||| ||| ||||||||||||||||||  | |  ||| ||||||| |||||||||||| |    
T  24313547 actctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttactacacaaattttcataaaaagttatca 24313646  T
Q  221 tttaaggtccttaac 235  Q
    ||||| ||| |||||    
T  24313647 tttaaagtctttaac 24313661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 25062034 - 25061989
Alignment:
Q  148 attattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  25062034 attattctttaaaaatgttaaaattttcaattttcaatgcactgat 25061989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 34211998 - 34212070
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    ||||||||||||| ||||| |||||||| ||||||||||||| | ||| ||||| ||||||||  ||||||||    
T  34211998 ttgaaaatgatgctttcaacacattaaacgtttaaaaagtaacaatttttacatgaaatttatagattatttc 34212070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 346 - 421
Target Start/End: Original strand, 48600631 - 48600704
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttcc 421  Q
    |||||||||| |||  ||||| ||||| ||| ||||||||||||| |||||||| |||||||||| ||||||||||    
T  48600631 tcttgaaaattatg--ttcaatacattgaaactttaaaaagtaattttttctacgtaaaatttataaattatttcc 48600704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 9342763 - 9342672
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca-ctgatcacataaatttttataaaa 212  Q
    ||||| |||||||  || ||||| ||||||||| || ||||||||||| ||||||||||||||||||  | || ||| ||||||||||||||    
T  9342763 actctataagcattctagattaaataattattcattaaaaatgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 359 - 438
Target Start/End: Original strand, 15985277 - 15985356
Alignment:
Q  359 gcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||| ||||| |||  |||||||||||| ||||  ||||||||||||| |||||||||| ||||| |||| |||||    
T  15985277 gcattcaacacattgaaatattaaaaagtaatttttttaacataaaatttatcaattatttccttttttgaatctttaac 15985356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 33072181 - 33072087
Alignment:
Q  162 atgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaactcgagcactagttaacatttcc 257  Q
    |||| ||| |||||||||| ||||||| | || ||| ||||||||||||||| |||  |||| |||||||||||  | ||||||||||||||||||    
T  33072181 atgtcaaagttttcaatttccaatgcattaattacacaaatttttataaaaaattaccatttcaggtccttaacgag-gcactagttaacatttcc 33072087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 467
Target Start/End: Original strand, 42983896 - 42984015
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaactattactct 447  Q
    |||||||| ||||||| || ||||| ||| ||||||||||||  ||  ||||||||||||||| ||| |||||| ||||| |||| ||||| | |  |||    
T  42983896 ttgaaaataatgcatttaacacattgaaaatttaaaaagtaactttgactacataaaatttataaatcatttccatttttgaatcattaacaagtgttct 42983995  T
Q  448 gagggcactggtgagcaaga 467  Q
     |||||||| || |||||||    
T  42983996 tagggcacttgttagcaaga 42984015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 346 - 421
Target Start/End: Original strand, 45153528 - 45153603
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttcc 421  Q
    ||||||||||| |||||||||  |||| ||| |||| |||||||  |||||||| |||||||||| ||||||||||    
T  45153528 tcttgaaaatggtgcattcaatgcattgaaactttataaagtaactttttctacttaaaatttatcaattatttcc 45153603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 38101393 - 38101341
Alignment:
Q  134 tgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgc 187  Q
    ||||||||||||||||||||||||||||||  ||||  ||||||||||||||||    
T  38101393 tgttaaattaagtaattattcttttaaaat-ataaaagtttcaattttcaatgc 38101341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 43767323 - 43767380
Alignment:
Q  358 tgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaatt 415  Q
    ||||||||| |||||||||  | |||||||||| ||||||||||||||||||| ||||    
T  43767323 tgcattcaacacattaaaacatcaaaaagtaattttttctacataaaatttatcaatt 43767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 46712009 - 46711912
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    |||| |||||||||||||||| |||| || |||| |||  |||| ||||||| |||| ||||  ||||||||||| | || ||||||| |||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattacatgcatttttataaatacttgttatttatggtccttaa 46711912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 29612016 - 29612084
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    ||||||||| |||  |||| |||||||||||||||| ||||||| | | |||||||||| |||||||||    
T  29612016 actctttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgcact 29612084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 40614356 - 40614308
Alignment:
Q  142 taagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  40614356 taagtaattattctttaaaaatgtcaatgttttcaattttcaatgcact 40614308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 42785581 - 42785494
Alignment:
Q  350 gaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||||||||| |  ||||||||||||||||| ||||| |||   |||||||| |||| |||||||| |  |||||||||||||||    
T  42785581 gaaaatgatgcatttattacattaaaagtttaaaatgtaatttttcaaacataaaacttataaattattt-ctattttaaatccttaac 42785494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 50037272 - 50037192
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttcta-cataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||| |||||||||  ||||||| |||| |||| || |||||||||||| |||||||||| ||||| |||| |||||||    
T  50037272 attcaacacattaaaacattaaaaaataattttttttaacataaaatttatcaattatttccttttttgaatctttaacta 50037192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 3027095 - 3026980
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttatta 220  Q
    |||||||||||||  |||||||||||||| || ||| ||||| | |||  ||||| ||| |||||||| | |  ||| ||| ||| ||||||||||| ||    
T  3027095 actctttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgcacttcactacacaaactttcataaaaagttacta 3026996  T
Q  221 tttaaggtccttaact 236  Q
    ||||| ||||||||||    
T  3026995 tttaaagtccttaact 3026980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 438
Target Start/End: Original strand, 31596301 - 31596360
Alignment:
Q  379 ttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||||||| ||||| ||||||||||||| |||| ||||   |||||||||||||||    
T  31596301 ttaaaaagtaattttttcaacataaaatttatcaattgtttcttattttaaatccttaac 31596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 31752763 - 31752692
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatc 432  Q
    |||||| |||||||||  ||||||||||   ||||| ||||||||||||| |||||||||| ||||| ||||    
T  31752763 attcaacacattaaaatattaaaaagtacatttttcaacataaaatttatcaattatttccttttttgaatc 31752692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 31830264 - 31830185
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||| ||||| ||||||||||||||||  || ||||||||||| || | |||||||||  | ||| ||||||||||||    
T  31830264 attcaacacattgaaagtttaaaaagtaactttgtctacataaaacttgtaaattatttctatatttgaatccttaacta 31830185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 44344796 - 44344717
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||| | |||||||  ||||||| |||| ||||| ||||| ||||||| |||||||||| ||| | ||||||||||||    
T  44344796 attcaacatattaaaatattaaaaaataattttttcaacatataatttatcaattatttccatttgttaatccttaacta 44344717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 20821314 - 20821412
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    |||| |||||||||||||||| ||||| |||||  ||| ||||| |||||||| | || ||| ||| ||| |||||||||||  |||||| ||||||||    
T  20821314 taaactaagtaattattctttaaaaatattaaaggttttaatttccaatgcactttattacacaaactttcataaaaagttaccatttaaagtccttaa 20821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 378 - 440
Target Start/End: Original strand, 31844987 - 31845049
Alignment:
Q  378 tttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    ||||||||||||| |||  ||||| |||||| | |||||||||| ||||| ||||||||||||    
T  31844987 tttaaaaagtaatttttcatacattaaatttgtaaattatttccttttttgaatccttaacta 31845049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 440
Target Start/End: Complemental strand, 14030356 - 14030271
Alignment:
Q  355 tgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    ||||||||||||||| || ||| || ||||||||||||||| ||| ||||| |||  ||||||||   ||||  ||||||||||||    
T  14030356 tgatgcattcaaaactttgaaacttaaaaaagtaatattttttacttaaaacttaacaattatttttattttagaatccttaacta 14030271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 16678935 - 16678980
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttc 182  Q
    ||||| ||||||||||||||||||||| | ||| ||||||||||||    
T  16678935 taaataaagtaattattcttttaaaatataaaagttttcaattttc 16678980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 39400387 - 39400298
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    |||||||||| ||  |||| ||| |||||||||||| || | ||||||| ||| ||||||||||||| | || ||||  |||||||||||    
T  39400387 actctttaagtatactaaaataattaattattctttaaacaagttaaacattttaattttcaatgcattaattacatgtatttttataaa 39400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 5e-31; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 12002263 - 12002376
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||| ||  ||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||| ||| ||||||||||||||||||| |||    
T  12002263 actctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgattacacaaatttttataaaaagttactat 12002362  T
Q  222 ttaaggtccttaac 235  Q
    ||||| ||||||||    
T  12002363 ttaagatccttaac 12002376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 14016977 - 14016863
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||| ||||||| ||||||| ||||| | ||| |||||||||| |||||||||||||||| ||| ||||||||||| ||| |||    
T  14016977 actctttaagcatgctaaataaagtaatgattctttcaaaatttaaaagttttcaatttccaatgcactgatcacacaaacttttataaaaaattactat 14016878  T
Q  222 ttaaggtccttaact 236  Q
    |||||||||||||||    
T  14016877 ttaaggtccttaact 14016863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 1876592 - 1876479
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||| ||| ||| ||||||| |||  ||    
T  1876592 actctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattacacaaactttcataaaaaattaccat 1876493  T
Q  222 ttaaggtccttaac 235  Q
    |||| |||||||||    
T  1876492 ttaaagtccttaac 1876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 346 - 438
Target Start/End: Original strand, 42350407 - 42350499
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  42350407 tcttgaaaatgatgcattcaagacattgaaaatttaaaaagtaaatttttctacataaaatttataaattatttccatttttaaatccttaac 42350499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 18842365 - 18842223
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||| ||| |||| |||||| |||| | |||| ||| ||| ||||||||||  || | ||    
T  18842365 actctttaaccattttaaattaagtaattattctttaaaaatgtcaaagtttttaatttttaatgtattgattacacaaacttttataaaatattgtaat 18842266  T
Q  222 ttaaggtccttaact----cgagcactagttaacatttcccaa 260  Q
    |||||||||||||||     |||||||||||||||||||||||    
T  18842265 ttaaggtccttaacttccgagagcactagttaacatttcccaa 18842223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 40629073 - 40628964
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| |||| ||||| |||| ||||||| ||| ||| ||||||||||  ||| |||||||    
T  40629073 tttaaacatgttaaattaagtaattattcattaaaaatgttaaagtttttaatttccaattcactgattacacaaacttttataaaagattactatttaa 40628974  T
Q  226 ggtccttaac 235  Q
    ||||||||||    
T  40628973 ggtccttaac 40628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 44220814 - 44220752
Alignment:
Q  128 taagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  44220814 taagcatgttaaattaagtaattattcttttaaaatgtcaaagttttcaatttccaatgcact 44220752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 20522943 - 20523031
Alignment:
Q  125 ctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||||| ||| ||||||||||||||||| ||||| | ||| |||||||||||||||||||| || ||||||| ||| |||||||    
T  20522943 ctttaagcatgctaagttaagtaattattctttcaaaatttaaaagttttcaattttcaatgcactaattacataaactttcataaaaa 20523031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 11533228 - 11533342
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||| |||||||||||||  ||||||||||| ||||||| ||| |||||||||| |||||||||||   || ||| ||| ||||||| |||  ||    
T  11533228 actctttaaacatgttaaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgcactgaaggcacaaactttcataaaaaattaccat 11533327  T
Q  222 ttaaggtccttaact 236  Q
    |||||| ||||||||    
T  11533328 ttaaggcccttaact 11533342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 30486609 - 30486719
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttat-aaaaagttattattta 224  Q
    |||||| ||||||||| ||||||||||||||||||||| | ||| |||| |||||  ||||||||||| ||| ||| |||||| ||||| ||| ||||||    
T  30486609 tttaagtatgttaaataaagtaattattcttttaaaatttaaaagtttttaatttataatgcactgattacacaaacttttataaaaaaattactattta 30486708  T
Q  225 aggtccttaac 235  Q
    | |||||||||    
T  30486709 aagtccttaac 30486719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 39594599 - 39594486
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||| ||| ||||||||| |||||||||||  |||| | ||| ||||||||||||| | ||||||| | | ||| ||| |||||||||||| ||    
T  39594599 actctttaagaatgctaaattaagaaattattctttataaatatcaaagttttcaattttcattacactgattatacaaactttcataaaaagttatcat 39594500  T
Q  222 ttaaggtccttaac 235  Q
    ||||| ||||||||    
T  39594499 ttaagatccttaac 39594486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 2376838 - 2376726
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||||||| ||||||||| |||||||||||| ||||| | ||| ||||||||||  || | | | || | ||||| ||| ||||||||||| |||    
T  2376838 actctttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaagttactat 2376739  T
Q  222 ttaaggtccttaa 234  Q
    |||||||||||||    
T  2376738 ttaaggtccttaa 2376726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 37449541 - 37449604
Alignment:
Q  127 ttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  37449541 ttaaacattttaaattaagtaattatttttttaaaatgtcaaacttttcaattttcaatacact 37449604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 14955336 - 14955218
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| | |||| |||||||| | ||||| ||||||||||||||| ||||| ||||||||||||||||  ||||||  |||||| || | | ||||||    
T  14955336 ttaagaattttaaagaggaagttttatcttggaaatgatgcattcaacacattgaaagtttaaaaagtaactttttctttataaaacttctaagttattt 14955237  T
Q  420 ccgtttttaaatccttaac 438  Q
    |  ||||| ||||||||||    
T  14955236 ctatttttgaatccttaac 14955218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 44907229 - 44907325
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaac-ttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtcctt 232  Q
    ||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||| || |||  || ||| ||||||| ||| |||||||| |||||    
T  44907229 taaattaagtaattattttttaaaaatgtcaaactttttcaattttcaatgcactaataacactaactttcataaaaatttactatttaagatcctt 44907325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 7627957 - 7627866
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||| ||| |||| |||||  ||| ||||||||||| ||| ||| |||||||    
T  7627957 actctttaaacatgttaaattaagtaattatttttaaaaaatgtgaaagtttttaatttctaatacactgatcacacaaactttcataaaaa 7627866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 44024029 - 44024122
Alignment:
Q  144 agtaattattcttttaaaatgttaaacttttcaa-ttttcaatgcactgatcacataaatttttat-aaaaagttattatttaaggtccttaac 235  Q
    ||||||||||||||||||||   ||| ||||||| |||||||||||||||| ||| ||| || ||| ||||| ||||||||| |||||||||||    
T  44024029 agtaattattcttttaaaataaaaaagttttcaaattttcaatgcactgattacacaaacttctataaaaaaattattattttaggtccttaac 44024122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 440
Target Start/End: Complemental strand, 472085 - 471997
Alignment:
Q  352 aaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||||| |||||| ||||| ||||||||||||||||  || ||||||||||| || | |||||||||  | ||||||| ||||||||    
T  472085 aaatgatgtattcaacacattgaaagtttaaaaagtaactttatctacataaaacttgtaaattatttctatatttaaattcttaacta 471997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 36907827 - 36907907
Alignment:
Q  153 tcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtcctta 233  Q
    ||||| ||||| | ||| |||||||||| ||||||| |||| ||| ||| ||||||||||||||| ||||||| |||||||    
T  36907827 tctttcaaaatttaaaagttttcaatttccaatgcaatgattacacaaacttttataaaaagttactatttaaagtcctta 36907907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 43841043 - 43841119
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||| |||  | |||| ||| ||||||||| |||||    
T  43841043 taaattaagtaattattctttaaaaatattaaatttttcaatttttaatatattgattacacaaatttttacaaaaa 43841119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 26014827 - 26014752
Alignment:
Q  159 aaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    ||||||||||  ||||||| || |||||||||||| ||| |||  |||||||||||||| |||||| |||||||||    
T  26014827 aaaatgttaatattttcaagttccaatgcactgattacacaaacatttataaaaagttactatttatggtccttaa 26014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 42631713 - 42631776
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaattta 409  Q
    ||||||||||| |||||||||  |||||||| ||||||| ||||| |||||||| |||||||||    
T  42631713 tcttgaaaatggtgcattcaatgcattaaaactttaaaaggtaattttttctacttaaaattta 42631776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 44711539 - 44711460
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||| ||||||||||||||||||||||| || ||||||||||| || | || ||||||  | |||||||| |||||||    
T  44711539 attcaacacattaaaagtttaaaaagtaattttatctacataaaacttgtaaagtatttctatatttaaatctttaacta 44711460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 5218142 - 5218080
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    |||||| | ||||||||||  ||||||||||| ||||||||||| |||| |||||||||||||    
T  5218142 tttaagtacgttaaattaaaaaattattctttaaaaatgttaaaatttttaattttcaatgca 5218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 28382893 - 28382827
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    ||||||| ||| ||||||||||||| |||| ||||||||||||||| ||| ||||||| ||| ||||    
T  28382893 tctttaaacattttaaattaagtaaatatttttttaaaatgttaaaatttacaatttttaatacact 28382827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 32271170 - 32271224
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattt 180  Q
    ||||||||| |||||||||| ||||||| ||| ||||||||||| ||||||||||    
T  32271170 tttaagcattttaaattaagaaattattttttaaaaatgttaaagttttcaattt 32271224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 35501178 - 35501064
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactg-atcacataaatttttataaaaagttatta 220  Q
    ||||||||| |||  || ||| |||||||| ||||| ||||| ||||| |||| ||||| |||||||||  || ||| ||| ||||||||||| ||| ||    
T  35501178 actctttaaacattctacatttagtaattaatctttgaaaatattaaagtttttaatttccaatgcactttattacacaaacttttataaaaatttaata 35501079  T
Q  221 tttaaggtccttaac 235  Q
    ||||| |||||||||    
T  35501078 tttaaagtccttaac 35501064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 44063098 - 44063188
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||| ||||||||||| | ||| ||| |||||||| ||| |||||| | ||||||||||| ||||||||   |||||||||| |||||    
T  44063098 ttgaaaacgatgcattcaagatattgaaaatttaaaaaataacattttcaatataaaatttataaattattttaatttttaaatctttaac 44063188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 9629910 - 9629838
Alignment:
Q  141 ttaagtaattattcttttaaaatgttaaactttt-caattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||||||| ||| ||||||| |||||||| |||||||||||||| |||| |||| |||||| |||||||    
T  9629910 ttaagtaattatt-tttaaaaatgtaaaactttttcaattttcaatgcattgattacattaattttcataaaaa 9629838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 30158173 - 30158108
Alignment:
Q  121 aactctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatg 186  Q
    ||||||||||||||  |||||||| |||||||||||| ||||||| ||| |||| ||||| |||||    
T  30158173 aactctttaagcattctaaattaaataattattctttgaaaatgtaaaagtttttaatttccaatg 30158108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 38047720 - 38047607
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttatta 220  Q
    |||||||||||||  |||||||||||||| ||||||  |||||| |||  ||| |||||| ||||||| | || ||| ||| ||| ||| |||||||| |    
T  38047720 actctttaagcattctaaattaagtaatttttctttataaatgtcaaaaattttaatttttaatgcactttattacacaaactttcatataaagttatca 38047621  T
Q  221 tttaaggtccttaa 234  Q
    ||||| ||||||||    
T  38047620 tttaaagtccttaa 38047607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 37953336 - 37953248
Alignment:
Q  350 gaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||||||||||||| ||||  |||  ||||||||||||  ||| |  ||||||||||| |||||||||  ||||| ||||||||||    
T  37953336 gaaaatgatgcattcaacacatcgaaatgttaaaaagtaattatttttttataaaatttatcaattatttctatttttgaatccttaac 37953248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 38019528 - 38019472
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaat 178  Q
    |||||||||||||| ||||||||| ||||||||||| ||| | ||||| ||||||||    
T  38019528 actctttaagcatgctaaattaagaaattattctttaaaatttttaaagttttcaat 38019472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 39691224 - 39691112
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||   | |||||  ||||||||||| |||| || |||   |||||||||||||||| |||  ||| ||||||| ||||||| ||| |||    
T  39691224 actctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacacaaattttcataaaaaattactat 39691125  T
Q  222 ttaaggtccttaa 234  Q
    ||||| |||||||    
T  39691124 ttaagatccttaa 39691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 31844313 - 31844214
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||||||||||||||| || |||| || ||| |||| ||||| |||||||| | || | | ||| ||| ||||||||||| ||||||| |||||||||    
T  31844313 taaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgcacttcattatacaaactttcataaaaagttactatttaaagtccttaac 31844214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 7513405 - 7513316
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    ||||||||||||| | |||  ||| |||||||||||  |||  |||||| |||| |||||||||||| |||| ||||  |||||||||||    
T  7513405 actctttaagcatatcaaaacaagcaattattctttagaaaaattaaacatttcgattttcaatgcattgattacatgtatttttataaa 7513316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 438
Target Start/End: Complemental strand, 7859195 - 7859118
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||| |||||||||  |||||||||||  ||||| ||||||||| ||| |||| ||| | |||||||||| |||||    
T  7859195 attcaacacattaaaacattaaaaagtaactttttcaacataaaatatatcaattgttttcttttttaaatctttaac 7859118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 27506075 - 27505979
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    |||||||||  |||||| |||||||| || |||  ||||||||||||||||||| || ||| || ||||| |||||| |||  |||||||||| ||||    
T  27506075 taaattaagatattatttttttaaaa-gtgaaatatttcaattttcaatgcactaattacacaattttttgtaaaaatttacaatttaaggtcattaa 27505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 27801336 - 27801223
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaattttta-taaaaagttatta 220  Q
    ||||||||| |||  |||||| ||||||||||||||||||| || ||   || |||||||||||||| | || ||| || |||||| |||||| ||| ||    
T  27801336 actctttaatcattctaaatttagtaattattcttttaaaaagtcaactattacaattttcaatgcattcattacacaactttttattaaaaacttacta 27801237  T
Q  221 tttaaggtccttaa 234  Q
    ||||| || |||||    
T  27801236 tttaaagtgcttaa 27801223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 34496973 - 34496892
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgttttt 427  Q
    ||||| |||| ||| ||||||  |||| ||| |||| ||||||||||||| ||| |||||||||  |||||||||| |||||    
T  34496973 tcttgtaaattatgtattcaatgcattgaaactttataaagtaatattttatacttaaaatttaccaattatttccattttt 34496892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 38869161 - 38869108
Alignment:
Q  352 aaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaa 405  Q
    |||| ||||||| ||  |||||||||||||||||||||| |||| |||||||||    
T  38869161 aaataatgcatttaattcattaaaagtttaaaaagtaattttttttacataaaa 38869108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 5e-31; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 39973888 - 39974001
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | | ||| ||| |||||||||||| ||    
T  39973888 actctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattatacaaactttcataaaaagttatcat 39973987  T
Q  222 ttaaggtccttaac 235  Q
    |||| ||| |||||    
T  39973988 ttaaagtctttaac 39974001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 48947202 - 48947314
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    |||||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||| |||||||||||| ||| ||||||| |||||||||||  ||||    
T  48947202 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 48947301  T
Q  224 aaggtccttaact 236  Q
    || ||||||||||    
T  48947302 aaagtccttaact 48947314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 42573879 - 42573784
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | | ||| ||  |||||||||||    
T  42573879 actctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgattatacaaacttcaataaaaagtta 42573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 33791849 - 33791736
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||| |||| ||| ||| ||| ||| ||| ||||||||||| |||    
T  33791849 actctttaagtatgctaaattaagtaattattcttttaaaatgtcaaatttttcaatttccaatacaccgattacacaaactttcataaaaagttactat 33791750  T
Q  222 ttaaggtccttaac 235  Q
    |||| ||| |||||    
T  33791749 ttaaagtctttaac 33791736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 290602 - 290701
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||| ||| ||  || |||||||||||||||| || |||||||    
T  290602 taaattaagtaattattcttttaaaatgtcaaagttttcaatttacaatgcactgattacacaaacttcaatgaaaagttattatttaacgttcttaact 290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 320 - 472
Target Start/End: Complemental strand, 42826691 - 42826537
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaatt-att 418  Q
    ||||||| ||||||| | ||||| | |||||||||| |||||||||| ||||| ||  |||||||||||| |||||||||||||||||||| |||| |||    
T  42826691 ttaagaagtctaaaaggaaagttttgtcttgaaaattatgcattcaagacattgaagatttaaaaagtaacattttctacataaaatttataaattaatt 42826592  T
Q  419 tcc-gtttttaaatccttaactattactctgagggcactggtgagcaagatcctt 472  Q
    ||| ||||| |||| |||||| ||| | | ||||||| |||| ||||||| ||||    
T  42826591 tccagttttaaaattcttaaccattgccccgagggcattggttagcaagaccctt 42826537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 35259156 - 35259023
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||| ||| ||||||||| ||||||| ||| ||||||| ||| |||||||||| |||||| ||||| ||| | |  ||| ||||||||||  ||    
T  35259156 actctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattacacacacatttgtaaaaagttaccat 35259057  T
Q  222 ttaaggtccttaactcgagcactagttaacatttcc 257  Q
    |||| |||||||||  ||||||||||||||||||||    
T  35259056 ttaaagtccttaac--gagcactagttaacatttcc 35259023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 40286854 - 40286968
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||| |||| |||||||||| |||||   ||| |||||||||| |||||||||||  ||| ||| ||||||||||||||| |||    
T  40286854 actctttaagcatgctaaataaagtcattattctttcaaaattaaaaagttttcaatttccaatgcactgagtacacaaacttttataaaaagttactat 40286953  T
Q  222 ttaaggtccttaact 236  Q
    |||| || |||||||    
T  40286954 ttaaagttcttaact 40286968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 320 - 437
Target Start/End: Original strand, 29356896 - 29357012
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| ||||||||| ||||||  ||||| |||| |||||||||| | ||| |||||||||||||||| |||||||| || | |||||||||||||||    
T  29356896 ttaagaagtctaaaaagaaagttcagtcttggaaataatgcattcaagatattgaaagtttaaaaagtaacattttctaaat-atatttatgaattattt 29356994  T
Q  420 ccgtttttaaatccttaa 437  Q
     | |||||||||| ||||    
T  29356995 tcatttttaaatcattaa 29357012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 38172665 - 38172754
Alignment:
Q  146 taattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||||||||| ||||||| ||| |||| |||||| ||||||||||| ||| ||| |||||||||||||||| |||||| |||||||||    
T  38172665 taattattctttaaaaatgtaaaagtttttaatttttaatgcactgattacacaaacttttataaaaagttatcatttaaagtccttaac 38172754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 48996 - 48884
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||| |||| |||| ||||||||||||||||||||  ||||||| ||| ||||||||||||||||||| ||| ||| ||| ||| ||||||| ||| |||    
T  48996 actcgttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaatgcaccgattacacaaactttcataaaaatttactat 48897  T
Q  222 ttaaggtccttaa 234  Q
     |||||| |||||    
T  48896 gtaaggttcttaa 48884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 49478808 - 49478922
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaac-ttttcaattttcaatgcactgatcacataaatttttataaaaagttatta 220  Q
    |||||||||||||||| | ||||||||||||| |||| |||||| |||  |||||||||| |||||||||||| ||| ||| || ||| ||||||||  |    
T  49478808 actctttaagcatgttgagttaagtaattattttttttaaatgtcaaaagttttcaatttccaatgcactgattacacaaacttctatgaaaagttacca 49478907  T
Q  221 tttaaggtccttaac 235  Q
    |||||| ||||||||    
T  49478908 tttaagttccttaac 49478922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 320 - 429
Target Start/End: Complemental strand, 15280589 - 15280480
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| | ||||||||||||| | ||||  |||||||||| |||| | ||| |||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  15280589 ttaagaagtttaaaaaggaagttttatcttagaaatgatgcactcaagatattgaaagtttaaaaaataacattttttacataaaatttataaattattt 15280490  T
Q  420 ccgtttttaa 429  Q
    |  |||||||    
T  15280489 ctatttttaa 15280480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 3047863 - 3047967
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| |||||||||||||| |||||| ||||||| ||| ||||| |||| ||||||| |||| | | ||| ||| ||||||| ||| |||    
T  3047863 actctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgattaaacaaactttcataaaaaattactat 3047962  T
Q  222 ttaag 226  Q
    |||||    
T  3047963 ttaag 3047967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 40053293 - 40053401
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||  ||||||| |||||| |||||| ||||||| ||| ||||||||||||||| || | || ||| ||| ||| ||||||||||| |||||||    
T  40053293 tttaagcattctaaattaggtaattgttctttaaaaatgtcaaagttttcaattttcaatacatttattacacaaactttcataaaaagttactatttaa 40053392  T
Q  226 ggtccttaa 234  Q
    |||| ||||    
T  40053393 ggtcattaa 40053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 51904665 - 51904565
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||| |  |  ||| ||| ||| ||||||| ||   ||||||||||||||||    
T  51904665 ttaaattaagtaattattcttttaaaatgttaaagttttcaatttccaatgccccaactacacaaactttcataaaaaattgcaatttaaggtccttaac 51904566  T
Q  236 t 236  Q
    |    
T  51904565 t 51904565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 16113915 - 16114006
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    |||||||||||||  || |||||||||||||| ||| ||||||| ||| |||||||||| |||||||||||| ||| ||| ||| |||||||    
T  16113915 actctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactgattacacaaactttcataaaaa 16114006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 4040889 - 4041003
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||||||| ||||||||||||||||||   | ||| ||| ||| |||||||||||||||  ||| || ||| ||| ||| | |||||||||| ||    
T  4040889 actctttaagcattttaaattaagtaattattacataaaagtgtcaaagttttcaattttcaatatacttattacacaaactttcacaaaaagttatcat 4040988  T
Q  222 ttaaggtccttaact 236  Q
    |||| ||||||||||    
T  4040989 ttaaagtccttaact 4041003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 31042999 - 31043085
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataa 210  Q
    |||||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||| |||| ||| ||| ||| ||||    
T  31042999 tctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgattacacaaactttcataa 31043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 34861322 - 34861251
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    |||||||||||||  ||||||||||||||||| ||| ||||||| |||| ||||||||| |||| |||||||    
T  34861322 actctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactgat 34861251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 31398506 - 31398408
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||||| |||||||| ||||||||||| ||| |||| |||||  |||| ||  || ||||||||||||||||||| ||| |||||||| || |||||    
T  31398506 taaattaaataattatttttttaaaatgtgaaattttttaatttataatgtaccaattacataaatttttataaaaaattactatttaagatcgttaac 31398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 33744245 - 33744168
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacata 199  Q
    ||||||||||||| ||||| |||||||||||| |||||||| || |||  |||| |||||||||||| |||| |||||    
T  33744245 actctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacata 33744168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 379 - 440
Target Start/End: Complemental strand, 42592739 - 42592678
Alignment:
Q  379 ttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||||||||| ||||| ||||||||||||| |||||||||  |||||||||| |||||||    
T  42592739 ttaaaaagtaattttttcaacataaaatttatcaattatttctttttttaaatctttaacta 42592678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 48811929 - 48812018
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    ||||||||||| ||||||| ||||||||||||||||||||| || |||  ||||||| | ||||||| |||| |||   |||||||||||    
T  48811929 actctttaagcctgttaaaataagtaattattcttttaaaaagtaaaatatttcaatctccaatgcattgattacacgcatttttataaa 48812018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 440
Target Start/End: Complemental strand, 28765607 - 28765519
Alignment:
Q  352 aaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||||| |||||| ||||| ||||||||||||||||| | |||| | |||||||| | ||||| |||  ||||| ||||||||||||    
T  28765607 aaatgatgtattcaacacattgaaagtttaaaaagtaatttattctgcgtaaaatttgtaaattacttctattttttaatccttaacta 28765519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 31807886 - 31807822
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||||||  |||| |||||||||||||||| ||||||| | | ||||||||||||||||||||    
T  31807886 tttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgcact 31807822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 35543509 - 35543401
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||| ||||||||||||||||| ||||||||| | ||| |||||||||| ||||  | | || ||| ||| |||| || |||||||  ||||||    
T  35543509 tttaagcatgctaaattaagtaattatttttttaaaatatcaaagttttcaatttccaatatattaattacacaaacttttgtacaaagttaccatttaa 35543410  T
Q  226 ggtccttaa 234  Q
    |||| ||||    
T  35543409 ggtctttaa 35543401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 290959 - 290852
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| |||||  |||||||||||||| ||||| | ||| |||| ||||| |||||| ||||  ||| | | |||||||||| |||| |||    
T  290959 actctttaagcatgctaaatagagtaattattctttcaaaatttaaaagtttttaatttccaatgcgctgactacacatacttttataaaaggttactat 290860  T
Q  222 ttaaggtc 229  Q
     |||||||    
T  290859 ctaaggtc 290852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 24034055 - 24034166
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    |||||||||||  |||||  |||||||||||||| ||||| | ||| ||||||||||  ||||||||||| ||| ||| | ||||||||  ||| |||||    
T  24034055 tctttaagcatactaaatagagtaattattctttcaaaatttaaaagttttcaatttctaatgcactgattacacaaactcttataaaagtttactattt 24034154  T
Q  224 aaggtccttaac 235  Q
    || |||| ||||    
T  24034155 aaagtccataac 24034166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 438
Target Start/End: Complemental strand, 34620700 - 34620617
Alignment:
Q  355 tgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||||||| ||||| ||| || |||||||||| |||||||||||||| |||  |||||||||  ||||  ||||||||||    
T  34620700 tgatgcattcaacacattgaaacttgaaaaagtaattttttctacataaaacttaccaattatttctattttagaatccttaac 34620617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 346 - 420
Target Start/End: Original strand, 2507012 - 2507086
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    |||||| ||||||||||| || || || ||| ||||||||||||| |||| || ||||||||||| |||||||||    
T  2507012 tcttgagaatgatgcatttaatacgttgaaattttaaaaagtaattttttatatataaaatttatcaattatttc 2507086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 17630326 - 17630372
Alignment:
Q  392 ttttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||    
T  17630326 ttttctacataaaatttataaattatttcctcttttaaatccttaac 17630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 46804934 - 46804820
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||  |||||||| |||| ||| ||| |||||| ||||||||  ||||| |||||||||||| |||| || ||| |||| |  |||  ||    
T  46804934 actctttaagcattctaaattaattaataattttttaaaaatgataaactttctaatttccaatgcactgattacattaactttcataatagtttaccat 46804835  T
Q  222 ttaaggtccttaact 236  Q
    |||||||| ||||||    
T  46804834 ttaaggtcattaact 46804820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 4521118 - 4521029
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    |||||||||||||  ||||  |||  |||||||||| |||| ||||||| ||||||||| ||||||| |||| ||||  |||||||||||    
T  4521118 actctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 4521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 44442250 - 44442350
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||| || |||||||| | ||||||||||| |||| || |||  |||||||||||||| || | |  ||| | ||||||||||||||||| |||||||    
T  44442250 tttaagtattttaaattaggaaattattctttaaaaaagtcaaatatttcaattttcaatacattaaatacacatatttttataaaaagttactatttaa 44442349  T
Q  226 g 226  Q
    |    
T  44442350 g 44442350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 27262818 - 27262759
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    |||||| |||||||||  |||||||||||| |||||||||||||| |||| |||| ||||    
T  27262818 attcaacacattaaaacattaaaaagtaattttttctacataaaagttatcaattgtttc 27262759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 1905783 - 1905709
Alignment:
Q  393 tttctacataaaatttatgaattatttccgtttttaaatccttaactattactctgagggcactggtgagcaaga 467  Q
    ||||||||| ||||| || ||||||||||  |||| |||||||||| ||| | || ||||||||||| |||||||    
T  1905783 tttctacatgaaattcataaattatttcctcttttgaatccttaaccattgcccttagggcactggttagcaaga 1905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 5423854 - 5423752
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    ||||||||||| ||||||||   ||||||||||| |||| ||||||   |||||||||||||||| | |  |||||| |||| ||||||| |||  ||||    
T  5423854 tctttaagcattttaaattagaaaattattctttaaaaaagttaaatagttcaattttcaatgcattaaatacataagttttcataaaaaattaccattt 5423755  T
Q  224 aag 226  Q
    |||    
T  5423754 aag 5423752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 26700245 - 26700335
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaa 212  Q
    ||||||||| |||  ||||| |||||||||||||||||||||   ||| |||| ||||| |||| |||| || ||| ||| ||||||||||    
T  26700245 actctttaaacatactaaataaagtaattattcttttaaaattaaaaagtttttaatttccaatacactcattacacaaacttttataaaa 26700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 34833796 - 34833738
Alignment:
Q  123 ctctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaatttt 181  Q
    ||||||||  || ||||||||| |||||||||||| ||||| ||||| |||||||||||    
T  34833796 ctctttaaatattttaaattaaataattattctttaaaaatattaaagttttcaatttt 34833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 405
Target Start/End: Original strand, 1411676 - 1411760
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaa 405  Q
    ||||||| | |||||||||| || | ||||   ||||||| |||||| ||||| ||||||||||||||||| || |||||||||||    
T  1411676 ttaagaagtttaaaaaggaaattttatcttaggaatgatgtattcaacacattgaaagtttaaaaagtaat-ttatctacataaaa 1411760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 346 - 419
Target Start/End: Original strand, 1609740 - 1609812
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    |||||||||||||||||||||   ||| |||  |||||| ||||| |||||||| |||||||||| ||||||||    
T  1609740 tcttgaaaatgatgcattcaatgtattgaaa-cttaaaatgtaattttttctacttaaaatttatcaattattt 1609812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 8791530 - 8791485
Alignment:
Q  142 taagtaattattcttttaaaatgttaaacttttcaattttcaatgc 187  Q
    |||||||||| ||||| ||||||| ||| |||||||||||||||||    
T  8791530 taagtaattagtctttaaaaatgtaaaagttttcaattttcaatgc 8791485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 36321735 - 36321646
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    |||||||||||||   |||  |||||||||||||||  ||| ||||||| |||| |||| ||||||| |||| ||||  |||||||||||    
T  36321735 actctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaa 36321646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 44461597 - 44461673
Alignment:
Q  148 attattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||||||||||| ||| |||| |||||| |||||| | || ||| ||||||| ||||||| ||| |||||||    
T  44461597 attattcttttaaaatgtcaaagtttttaatttttaatgca-taattacacaaattttcataaaaatttactatttaa 44461673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 2e-30; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 320 - 444
Target Start/End: Complemental strand, 31188855 - 31188731
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| | ||||||||||||| | ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||| ||||||||    
T  31188855 ttaagaagtttaaaaaggaagttttgtcttgaaaatgatgcattcaagacattgaaagtttaaaaagtaacattttctacataaaacttataaattattt 31188756  T
Q  420 ccgtttttaaatccttaactattac 444  Q
       ||||||||| |||||| |||||    
T  31188755 ttatttttaaattcttaaccattac 31188731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 320 - 470
Target Start/End: Original strand, 5000330 - 5000481
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaata-ttttctacataaaatttatgaattatt 418  Q
    ||||||| ||||||| ||||||| | ||||| ||||||||||||||| ||||| |||||||||||||||| | |||| ||||||||| |||| |||||||    
T  5000330 ttaagaagtctaaaatggaagttttgtcttggaaatgatgcattcaagacattgaaagtttaaaaagtaacatttttttacataaaacttataaattatt 5000429  T
Q  419 tccgtttttaaatccttaactattactctgagggcactggtgagcaagatcc 470  Q
    ||  |||||||||||||||  ||| | ||||||||| |||| ||||| ||||    
T  5000430 tctatttttaaatccttaaacattgccctgagggcattggttagcaaaatcc 5000481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 8237961 - 8238060
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||| ||| ||| ||| |||||||||||  |||||||||||||||||    
T  8237961 taaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattacacaaactttcataaaaagttaccatttaaggtccttaact 8238060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 3267720 - 3267607
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| ||||| ||||||||||||||||||||| | ||| ||||| |||||||||||||| || ||| ||| ||||||||||| ||  |||    
T  3267720 actctttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttccattttcaatgcactcattacacaaacttttataaaaacttgctat 3267621  T
Q  222 ttaaggtccttaac 235  Q
    || |||||||||||    
T  3267620 tttaggtccttaac 3267607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 34299849 - 34299740
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||| || |||||| ||||||||||| ||||||| ||| |||||||||| ||| |||||||| ||| ||| ||| ||||||||||| |||||||    
T  34299849 tttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactgattacacaaactttcataaaaagttactatttaa 34299750  T
Q  226 ggtccttaac 235  Q
    ||||||||||    
T  34299749 ggtccttaac 34299740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 19619993 - 19620101
Alignment:
Q  127 ttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaag 226  Q
    ||||||||| ||||||||| ||||||||||| ||||||| ||| |||||||||| |||||||||||| | | || |||| ||||||||||| ||||||||    
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgattatacaacttttcataaaaagttactatttaag 19620092  T
Q  227 gtccttaac 235  Q
    | |||||||    
T  19620093 gcccttaac 19620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 24299237 - 24299127
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||||||||||||| |||||||| || ||||||| ||| |||| ||||| |||||||||||| | | || |||| |||||||||||||||||||    
T  24299237 tttaagcatgttaaattaagaaattattccttaaaaatgtcaaattttttaatttccaatgcactgattatacaacttttcataaaaagttattatttaa 24299138  T
Q  226 ggtccttaact 236  Q
    ||  |||||||    
T  24299137 ggctcttaact 24299127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 26871771 - 26871880
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaa 225  Q
    |||||||||| ||||| ||||||||||||||||||||| | ||| |||| |||||||| |  |||||| ||| ||| ||||||||||| ||| |||||||    
T  26871771 tttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttgaattttcattatactgattacacaaacttttataaaaaattactatttaa 26871870  T
Q  226 ggtccttaac 235  Q
    ||||||||||    
T  26871871 ggtccttaac 26871880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 23797722 - 23797819
Alignment:
Q  353 aatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaactattactctgag 450  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||||||| |||||||||| ||||| |||  ||||| |||| ||||||||||| |||||    
T  23797722 aatgatgtattcaatacattaaaaatttaaaaagtaattttttctacctaaaatttataaattacttctatttttgaatctttaactattaccctgag 23797819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 24610946 - 24610835
Alignment:
Q  124 tctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattattt 223  Q
    ||||||| |||| ||||||||  ||||||||||||||||||||||| |||| |||||  ||| |||| || ||| ||| ||||||||||| |||| ||||    
T  24610946 tctttaaacatgctaaattaaacaattattcttttaaaatgttaaagttttgaatttctaattcactaattacacaaacttttataaaaaattatcattt 24610847  T
Q  224 aaggtccttaac 235  Q
    || |||||||||    
T  24610846 aaagtccttaac 24610835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 431
Target Start/End: Original strand, 27088307 - 27088409
Alignment:
Q  330 taaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagt-aatattttctacataaaatttatgaattatttccgttttta 428  Q
    ||||||||||||| | ||||| |||| || ||||||| ||||| |||||||||||||| |||||||||||||||||| |||| || ||||||  ||||||    
T  27088307 taaaaaggaagttttgtcttggaaataatacattcaagacattgaaagtttaaaaagtaaatattttctacataaaacttataaaatatttctattttta 27088406  T
Q  429 aat 431  Q
    |||    
T  27088407 aat 27088409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 27189994 - 27189892
Alignment:
Q  330 taaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagt-aatattttctacataaaatttatgaattatttccgttttta 428  Q
    ||||||||||||| | ||||| |||| || ||||||| ||||| |||||||||||||| |||||||||||||||||| |||| || ||||||  ||||||    
T  27189994 taaaaaggaagttttgtcttggaaataatacattcaagacattgaaagtttaaaaagtaaatattttctacataaaacttataaaatatttctattttta 27189895  T
Q  429 aat 431  Q
    |||    
T  27189894 aat 27189892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 5482511 - 5482405
Alignment:
Q  128 taagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaagg 227  Q
    |||| ||| ||||||||||||||||||||||||||||| ||| ||||| |||| ||||||| || | ||| ||| ||| |||||||||||  |||||| |    
T  5482511 taagtatgctaaattaagtaattattcttttaaaatgtcaaagttttc-atttccaatgcattggttacacaaaatttcataaaaagttacaatttaaag 5482413  T
Q  228 tccttaac 235  Q
    ||||||||    
T  5482412 tccttaac 5482405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 5907820 - 5907933
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||  ||||||||||||||||| |||| |||||| ||||||||  |||| ||||||||| || |||  |||||| ||||||  ||| |||    
T  5907820 actctttaagcattctaaattaagtaattatt-tttttaaatgtcaaacttttttatttccaatgcactaattacactaattttcataaaagtttactat 5907918  T
Q  222 ttaaggtccttaact 236  Q
    |||| ||||||||||    
T  5907919 ttaaagtccttaact 5907933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 31498739 - 31498676
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaat 185  Q
    ||||||||| |||  |||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  31498739 actctttaaacattctaaattaagtaaatatttttttaaaatgttaaagttttcaattttcaat 31498676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 39316403 - 39316300
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    ||||||||||||| |||||||||||||||||||||  | ||||| ||| ||||||||||| | || |||| | ||| ||  ||| |||||||||||| ||    
T  39316403 actctttaagcatattaaattaagtaattattcttcaataatgtcaaaattttcaatttttactgtactggttacacaagctttcataaaaagttataat 39316304  T
Q  222 ttaa 225  Q
    ||||    
T  39316303 ttaa 39316300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 41150121 - 41150034
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    |||||||||  ||||||||||||||||||||| ||| |||||||  ||||||||  |||||||||||| | | ||||||| |||||||    
T  41150121 tttaagcatcataaattaagtaattattctttaaaagtgttaaagatttcaattcacaatgcactgattatacaaattttcataaaaa 41150034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 25176398 - 25176340
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattt 180  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| ||| ||||||||||    
T  25176398 actctttaaacatgttaaattagataattattcttttaaaatgtcaaatttttcaattt 25176340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 44452152 - 44452015
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttatta 220  Q
    ||||||||| |||  ||||||||||||||||| ||| ||||| | |||  ||||||||| |||||||| | || ||| ||| ||| ||||||| ||| ||    
T  44452152 actctttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgcactttattacacaaactttcataaaaaattacta 44452053  T
Q  221 tttaaggtccttaactcgagcactagttaacatttccca 259  Q
    ||||| ||| |||||  || |||||||||||||||||||    
T  44452052 tttaaagtcattaacggga-cactagttaacatttccca 44452015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 361 - 438
Target Start/End: Original strand, 35116895 - 35116972
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||| ||||| ||| || |||||| ||  ||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  35116895 attcaatacattgaaacttcaaaaaggaaatttttctacataaaatttataaattatttccttttttgaatccttaac 35116972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 25037071 - 25037007
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    ||||||||| |||||||||||||||||| ||| |||| || ||| |||| |||||||||||||||    
T  25037071 tttaagcattttaaattaagtaattattatttaaaaaggtcaaaatttttaattttcaatgcact 25037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 43492312 - 43492244
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcact 190  Q
    |||||||||||||  |||||||||||||||||||||  |||||| ||| ||| |||||| |||||||||    
T  43492312 actctttaagcattctaaattaagtaattattctttagaaatgtcaaaatttacaatttccaatgcact 43492244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 36595376 - 36595435
Alignment:
Q  323 agaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaa 382  Q
    |||| |||||| ||||| || | ||||| |||||||||||||||||||||||||||||||    
T  36595376 agaagtctaaagaggaaattttgtcttggaaatgatgcattcaaaacattaaaagtttaa 36595435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 38988702 - 38988816
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaat-ttttataaaaagttatt 219  Q
    |||| |||||| | |||||||||||||| ||| ||| | ||||||||| | || ||||| |||||||| | || |||||||| ||||||||||||||||     
T  38988702 actcattaagctttttaaattaagtaataattttttaataatgttaaagtgtttaatttccaatgcactttattacataaatattttataaaaagttatc 38988801  T
Q  220 atttaaggtccttaa 234  Q
    |||||| || |||||    
T  38988802 atttaaagtgcttaa 38988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 38362255 - 38362315
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatg 186  Q
    ||||||||| ||||||||  ||||||||| || ||||| ||||| ||||||||||||||||    
T  38362255 tttaagcattttaaattagataattattcattaaaaatattaaagttttcaattttcaatg 38362315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 18926323 - 18926418
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    ||||||||||||| |||||| | | ||||||||||| |||| || |||   |||||||||||||||| |||  ||| || |||| |||||||||||    
T  18926323 actctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaatacacaacttttcataaaaagtta 18926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 23682561 - 23682468
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    ||||||||| |||  |||||||| |||||||| ||||||||||| ||| |||| |||||||||| || |||| | | ||| |||||||||||||||    
T  23682561 actctttaaacattctaaattaaataattatt-ttttaaaatgtcaaagtttttaattttcaat-caatgataagacaaacttttataaaaagtta 23682468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 420
Target Start/End: Complemental strand, 35494748 - 35494685
Alignment:
Q  357 atgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    |||||||||||||||| ||| || |||||| ||  |||| || |||||||||||||||||||||    
T  35494748 atgcattcaaaacattgaaatttcaaaaagaaactttttttatataaaatttatgaattatttc 35494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 408
Target Start/End: Original strand, 35720981 - 35721036
Alignment:
Q  353 aatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaattt 408  Q
    |||||||||||||| | ||| ||||||||||||||||  || ||||||||||||||    
T  35720981 aatgatgcattcaacatattgaaagtttaaaaagtaactttatctacataaaattt 35721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 43189821 - 43189916
Alignment:
Q  346 tcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaa-tattttctacataaaatttatgaattatttccgtttttaaatccttaacta 440  Q
    |||||| ||||||| | |||| ||||| ||| |||||||||||| | |||| |||||||||||||| ||||| |||  ||||| |||| |||||||    
T  43189821 tcttgagaatgatgtagtcaatacattgaaaatttaaaaagtaacttttttttacataaaatttataaattacttctatttttgaatcgttaacta 43189916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 46716175 - 46716266
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    ||||||||| |||  |||||||| |||||||||||| ||||| | ||| |||||||| ||||||||| | || | | ||| |||||||||||    
T  46716175 actctttaaccattctaaattaaataattattctttaaaaatatcaaagttttcaatgttcaatgcattaattatacaaacttttataaaaa 46716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 4232761 - 4232827
Alignment:
Q  353 aatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| |||||| ||||| ||||||||||||||||| || |||| |||||| || | ||||||||    
T  4232761 aatgatgtattcaacacattgaaagtttaaaaagtaattttatctatataaaacttgtaaattattt 4232827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 10453485 - 10453531
Alignment:
Q  147 aattattcttttaaaatgttaaacttttcaattttcaatgcactgat 193  Q
    ||||||||||| ||||| ||||| |||||||||||||||||| ||||    
T  10453485 aattattctttaaaaatattaaaattttcaattttcaatgcattgat 10453531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 42911071 - 42911145
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    |||| |||| ||||||||||| |||| ||  ||| |||||||||||||||||| ||| ||||  |||||||||||    
T  42911071 taaaataagcaattattctttaaaaaagtcgaacatttcaattttcaatgcaccgattacatgtatttttataaa 42911145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 438
Target Start/End: Complemental strand, 28198087 - 28198010
Alignment:
Q  361 attcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||| ||||| ||| || |||||| ||  ||||||||||||| ||||| ||||||||||  |||| ||||||||||    
T  28198087 attcaagacattgaaacttcaaaaagaaactttttctacataaattttataaattatttcctcttttgaatccttaac 28198010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 41431202 - 41431161
Alignment:
Q  121 aactctttaagcatgttaaattaagtaattattcttttaaaa 162  Q
    |||||||||||||| |||||||||| ||||||| ||||||||    
T  41431202 aactctttaagcattttaaattaagaaattatttttttaaaa 41431161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 438
Target Start/End: Complemental strand, 47356681 - 47356600
Alignment:
Q  357 atgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    |||||||||| ||||||||| ||  ||||||||| || || ||||||||||||  |||||||||  |||| |||||| ||||    
T  47356681 atgcattcaacacattaaaacttacaaaagtaattttctcaacataaaatttaccaattatttctattttaaaatccgtaac 47356600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-30; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 320 - 476
Target Start/End: Original strand, 10228308 - 10228463
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||||| ||||||||||||| | ||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||    
T  10228308 ttaagaaatttaaaaaggaagttttttcttggaaatgatgcattcaagacattaaaagttt-aaaagtaattttttctacaaaaaatttataaattattt 10228406  T
Q  420 ccgtttttaaatccttaactattactctgagggcactggtgagcaagatccttaaaa 476  Q
     | ||||||||| |||||| ||| | ||||   ||||||| ||||||| || |||||    
T  10228407 tcatttttaaattcttaaccattgccctgaaaacactggttagcaagacccataaaa 10228463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 5704667 - 5704555
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttat-aaaaagttatta 220  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||  | |||||||||||||||| | |||| ||||||| ||| || ||||| ||||||    
T  5704667 actctttaaacatgctaaattaagtaattatttttttaaaatgtt--agttttcaattttcaatgtattgattacataaactttcataaaaaaattatta 5704570  T
Q  221 tttaaggtccttaac 235  Q
    ||||| ||| |||||    
T  5704569 tttaaagtctttaac 5704555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 10364754 - 10364853
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||||||||||||||||||| ||||| | ||| |||||||||| |||||||||||| | |  || ||| ||||||| ||| ||||||||||||||||||    
T  10364754 taaattaagtaattattctttaaaaatatcaaagttttcaatttacaatgcactgattatacgaactttcataaaaatttactatttaaggtccttaact 10364853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 330 - 472
Target Start/End: Original strand, 3686800 - 3686942
Alignment:
Q  330 taaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaa 429  Q
    |||||| |||||| | ||||| ||||||||||||||| | ||| |||||||||||| ||  |||||| |||||||| |||| |||||||||  |||||||    
T  3686800 taaaaatgaagttttgtcttggaaatgatgcattcaagatattgaaagtttaaaaaatagcattttcgacataaaacttataaattatttctatttttaa 3686899  T
Q  430 atccttaactattactctgagggcactggtgagcaagatcctt 472  Q
    || |||||| ||| | | ||||||| || | ||||||| ||||    
T  3686900 attcttaaccattgccccgagggcattgcttagcaagaccctt 3686942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 13445841 - 13445728
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| ||| ||||||||||  || ||||| |||||| ||| ||| ||||||| ||| | |    
T  13445841 actctttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttcaaaagcactaatcacacaaactttcataaaaaattacttt 13445742  T
Q  222 ttaaggtccttaac 235  Q
    ||| | ||||||||    
T  13445741 ttatgatccttaac 13445728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 8082572 - 8082455
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattattt 419  Q
    ||||||| |||||| | ||| || | ||||||||||| |||||| ||  |||| ||| ||||||||||||| |||||| |||||||||||  ||||||||    
T  8082572 ttaagaagtctaaataagaaattttgtcttgaaaatggtgcattaaatgcattgaaactttaaaaagtaattttttct-cataaaatttactaattattt 8082474  T
Q  420 ccgtttttaaatccttaac 438  Q
    |  ||||||||||||||||    
T  8082473 ctatttttaaatccttaac 8082455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 10429738 - 10429814
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaa 213  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||| |||| |||| ||||||| ||| |||||||    
T  10429738 ttaaatcaagtaattatt-ttttaaaatgtttaacttttcaattttcagtgcaatgattacataaactttcataaaaa 10429814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 3753205 - 3753142
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaat 185  Q
    |||||||||||||| ||||| ||||||||||||||| ||||| | ||| |||||||||||||||    
T  3753205 actctttaagcatgataaataaagtaattattctttcaaaatttaaaagttttcaattttcaat 3753142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 3769428 - 3769326
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgc-actgatcacataaatttttataaaaagttatta 220  Q
    |||||||||||||| ||| | ||||||||||||||| ||||| | ||| ||||||||||||||| | | |||| ||| ||| |||||||||| |||| ||    
T  3769428 actctttaagcatgataattaaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatgattacacaaacttttataaaatgttacta 3769329  T
Q  221 ttt 223  Q
    |||    
T  3769328 ttt 3769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 30910521 - 30910428
Alignment:
Q  141 ttaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    ||||| |||||||| || |||| ||||||  ||| |||||| ||  || | || ||||||||||||||||||| ||||||||||||||||||||    
T  30910521 ttaagaaattattcattcaaaaagttaaatattttaatttttaacacattaattacataaatttttataaaaacttattatttaaggtccttaa 30910428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 32547693 - 32547765
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    ||||||||||||| ||||| |||||||| ||||||||||||| | ||| ||||| ||||||||  ||||||||    
T  32547693 ttgaaaatgatgctttcaacacattaaacgtttaaaaagtaacaatttttacatgaaatttatagattatttc 32547765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 29716871 - 29716761
Alignment:
Q  126 tttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcac-tgatcacataaatttttataaaaagttattattta 224  Q
    |||||||||  |||||| || ||||||| ||||||||||| ||| |||||||||| |||||||| | || ||| ||| ||| |||||| ||||  |||||    
T  29716871 tttaagcattctaaattcagcaattatttttttaaaatgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaaggttaccattta 29716772  T
Q  225 aggtccttaac 235  Q
    | |||||||||    
T  29716771 aagtccttaac 29716761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 34552610 - 34552549
Alignment:
Q  125 ctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatg 186  Q
    |||||||||| ||| ||| |||||||||||||| ||||| ||||| |||| |||||||||||    
T  34552610 ctttaagcattttacatttagtaattattctttaaaaatattaaagtttttaattttcaatg 34552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 34552265 - 34552221
Alignment:
Q  144 agtaattattcttttaaaatgttaaacttttcaattttcaatgca 188  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  34552265 agtaattattctttaaaaatattaaagttttcaattttcaatgca 34552221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 6586527 - 6586414
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattat 221  Q
    |||||||||||||  ||||||| | ||||| ||||| |||| || | |   |||||||| | ||||| |||  ||||||||||| ||||||||||| |||    
T  6586527 actctttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattgaaaacataaattttcataaaaagttactat 6586428  T
Q  222 ttaaggtccttaac 235  Q
    |||||  |||||||    
T  6586427 ttaagacccttaac 6586414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 12226765 - 12226696
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaa-cttttcaattttcaatgcact 190  Q
    |||||||||  || ||||| |||  |||||||||||||||||||||||  ||||||||||||||| ||||    
T  12226765 actctttaataattttaaaataaaaaattattcttttaaaatgttaaatattttcaattttcaatacact 12226696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 21130706 - 21130807
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaac-ttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaa 234  Q
    ||||||| ||| |||||| ||||||||||| |||| |||| |||||||||| |||| ||  ||  || ||| ||||||  ||| ||||||||||||||||    
T  21130706 ttaaatttagttattatttttttaaaatgtcaaacttttttaattttcaatacactaattgcaccaactttcataaaagtttactatttaaggtccttaa 21130805  T
Q  235 ct 236  Q
    ||    
T  21130806 ct 21130807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 30509312 - 30509401
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaa 211  Q
    |||||||||||||   ||| |||| ||||||||||| ||||  | |||| |||| |||||||||||| |||| ||||  |||||||||||    
T  30509312 actctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgattacatgtatttttataaa 30509401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 415
Target Start/End: Complemental strand, 31597600 - 31597543
Alignment:
Q  358 tgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaatt 415  Q
    ||||||||| |||||||||  |||||||||||  |||||||||||||| |||| ||||    
T  31597600 tgcattcaacacattaaaacattaaaaagtaactttttctacataaaagttataaatt 31597543  T

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Target: scaffold0010 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 26697 - 26792
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagtta 217  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||| ||| |||  ||||||||||    
T  26697 actctttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattacacaaactttcgtaaaaagtta 26792  T

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Target: scaffold0495 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 320 - 476
Target Start/End: Original strand, 5027 - 5182
Alignment:
Q  320 ttaagaaatctaaaaaggaagttctctcttgaaaatgatgcattcaaaaca-ttaaaagtttaaaaagtaatattttctacataaaatttatgaattatt 418  Q
    ||||||||| ||||||||||||| | ||||| ||||||||||||||| ||| |||||||||| ||||||||| ||||||||| ||||||||| |||||||    
T  5027 ttaagaaatttaaaaaggaagttttttcttggaaatgatgcattcaagacatttaaaagttt-aaaagtaattttttctaca-aaaatttataaattatt 5124  T
Q  419 tccgtttttaaatccttaactattactctgagggcactggtgagcaagatccttaaaa 476  Q
    | | ||||||||| |||||| ||| | ||||   ||||||| ||||||| || |||||    
T  5125 ttcatttttaaattcttaaccattgccctgaaaacactggttagcaagacccataaaa 5182  T

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Target: scaffold0037 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 35273 - 35372
Alignment:
Q  136 ttaaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaac 235  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||||||| ||| ||||||| ||| ||| ||| |||||||||    
T  35273 ttaaatcaagtaattatt-ttttaaaatgttaaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatgtccttaac 35371  T

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Target: scaffold0236 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 19578 - 19677
Alignment:
Q  137 taaattaagtaattattcttttaaaatgttaaacttttcaattttcaatgcactgatcacataaatttttataaaaagttattatttaaggtccttaact 236  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||  |  ||| ||| ||||||| |||||||||||| |||||||||| ||||||    
T  19578 taaattaagtaattattctttaaaaatgttaaagttttcaatttttaatatatcgattacacaaattttcataaaaagttatcatttaaggtctttaact 19677  T

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Target: scaffold0564 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 3979 - 4051
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    ||||||||||||| ||||| |||||||| ||||||||||||| | ||| ||||| ||||||||  ||||||||    
T  3979 ttgaaaatgatgctttcaacacattaaacgtttaaaaagtaacaatttttacatgaaatttatagattatttc 4051  T

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Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 420
Target Start/End: Complemental strand, 3350 - 3278
Alignment:
Q  348 ttgaaaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaatttatgaattatttc 420  Q
    ||||||||||||| ||||| |||||||| ||||||||||||| | ||| ||||| ||||||||  ||||||||    
T  3350 ttgaaaatgatgctttcaacacattaaacgtttaaaaagtaacaatttttacatgaaatttatagattatttc 3278  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 5758 - 5816
Alignment:
Q  122 actctttaagcatgttaaattaagtaattattcttttaaaatgttaaacttttcaattt 180  Q
    |||||||||| || ||||||||||||||| |||||| ||||||| ||| ||||||||||    
T  5758 actctttaagaattttaaattaagtaatttttctttaaaaatgtcaaagttttcaattt 5816  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 48470 - 48415
Alignment:
Q  352 aaatgatgcattcaaaacattaaaagtttaaaaagtaatattttctacataaaattt 408  Q
    ||||||||||||||| | |||||||||||||||||| || |||| ||||||||||||    
T  48470 aaatgatgcattcaatatattaaaagtttaaaaagttat-ttttttacataaaattt 48415  T

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Target: scaffold0392 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 13749 - 13687
Alignment:
Q  376 agtttaaaaagtaatattttctacataaaatttatgaattatttccgtttttaaatccttaac 438  Q
    ||||||||||||||| |||| |||||||||||| | ||| |||||| ||||| |||| |||||    
T  13749 agtttaaaaagtaattttttttacataaaatttgtaaatcatttccattttttaatctttaac 13687  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 34399 - 34468
Alignment:
Q  390 tattttctacataaaatttatgaattatttccgtttttaaatccttaactattactctgagggcactggt 459  Q
    |||||||||| ||||||| || ||||||||||  ||||||||||||||| | | |||| | |||||||||    
T  34399 tattttctacctaaaattcataaattatttcctcttttaaatccttaaccactgctcttaaggcactggt 34468  T

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