View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4558-Insertion-6 (Length: 744)
Name: NF4558-Insertion-6
Description: NF4558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4558-Insertion-6 |
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Alignment Details
Target: chr1 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 7 - 457
Target Start/End: Original strand, 8438268 - 8438719
Alignment:
| Q |
7 |
atctctatgctttctgagtcgtcgcttgtagcgtactcaacaacaacgagtttgtcttttgctgattcaagtgcttcgtcgaactcttctatgctgtgaa |
106 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
8438268 |
atctctatgctttctgagtcgtcgcttgtagcgtactcaacaacaacgagtttatcttttgctgattcaagtgcttcgtcgaactcttctatgctatgaa |
8438367 |
T |
|
| Q |
107 |
ctctttgaactcttgcatcttttttcttcttagcatctgaagctgctgtgtctgttgcttttgtgataacaacacgtcgtctctgctggagatgcagatt |
206 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
8438368 |
ctctttgaactcttgcatcttttttcttcttagcatctgaagctgctgtgcctgttgctttggtgataacaacacgtcgtctctgctggagatgcagatt |
8438467 |
T |
|
| Q |
207 |
agaagagggtcctacacgagaatgaattttaggtagagaagaaggaagggaatgaagggtagggaatgaaattggtatagaagggattgagggtttgcat |
306 |
Q |
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||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8438468 |
agaagagggtcctacccgagaataaattttaggtatagaagaaggaagggaatgaagggtagggaatgaaattggtatagaagggattgagggtttgcat |
8438567 |
T |
|
| Q |
307 |
atgaaattgattgtagccatcggagaagagaaagcagagaaacaagagttggaggagattgggaaagaagagtatgggaa-tgataaaaaatcatatcct |
405 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
8438568 |
atgaaattgattgtagccatcggagaagagaaagcagagaaacaagagttggaggagattgggaaagaagagtatgggaattgataaaaaatcatatcct |
8438667 |
T |
|
| Q |
406 |
ctttgcttaattcatatgtggtacttattcaccacacgtgtcttttcatttt |
457 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
8438668 |
ctttgcttaattcatatgtggtacttattcaccacacgtgtcttttcatttt |
8438719 |
T |
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