View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4558_low_1 (Length: 348)

Name: NF4558_low_1
Description: NF4558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4558_low_1
NF4558_low_1
[»] chr3 (52 HSPs)
chr3 (41-334)||(20835387-20835680)
chr3 (41-334)||(22781712-22782005)
chr3 (42-334)||(37971479-37971771)
chr3 (41-334)||(38871119-38871412)
chr3 (39-334)||(25710883-25711178)
chr3 (41-334)||(4515819-4516112)
chr3 (39-334)||(4044613-4044908)
chr3 (42-331)||(10841241-10841529)
chr3 (41-334)||(33712429-33712720)
chr3 (42-334)||(53974310-53974601)
chr3 (41-332)||(40585978-40586269)
chr3 (42-331)||(36430267-36430555)
chr3 (43-331)||(41069837-41070123)
chr3 (42-328)||(10999557-10999843)
chr3 (42-331)||(20048334-20048624)
chr3 (75-334)||(6268163-6268422)
chr3 (41-334)||(33966894-33967173)
chr3 (41-286)||(7156541-7156769)
chr3 (40-114)||(32236130-32236204)
chr3 (42-114)||(84388-84460)
chr3 (41-114)||(20657412-20657485)
chr3 (41-114)||(26090200-26090273)
chr3 (42-114)||(7679722-7679794)
chr3 (43-114)||(24395096-24395167)
chr3 (41-168)||(36885711-36885838)
chr3 (37-168)||(44354469-44354600)
chr3 (40-114)||(672065-672139)
chr3 (42-159)||(35039572-35039689)
chr3 (42-161)||(7680981-7681100)
chr3 (39-168)||(30418687-30418816)
chr3 (39-168)||(36232642-36232771)
chr3 (41-168)||(38145211-38145338)
chr3 (85-168)||(47098274-47098357)
chr3 (39-137)||(33392508-33392606)
chr3 (65-159)||(49779834-49779928)
chr3 (42-168)||(11123858-11123984)
chr3 (84-168)||(39627093-39627176)
chr3 (65-128)||(48584857-48584920)
chr3 (41-159)||(2613306-2613424)
chr3 (245-323)||(47098139-47098217)
chr3 (42-159)||(36841085-36841202)
chr3 (38-154)||(4596411-4596526)
chr3 (41-81)||(22786329-22786369)
chr3 (65-153)||(51662148-51662236)
chr3 (72-167)||(8947833-8947927)
chr3 (40-159)||(19941680-19941799)
chr3 (71-162)||(54556376-54556467)
chr3 (245-323)||(1774218-1774296)
chr3 (42-168)||(11095647-11095773)
chr3 (84-168)||(52343124-52343208)
chr3 (65-168)||(14279129-14279232)
chr3 (83-152)||(52812168-52812237)
[»] chr4 (56 HSPs)
chr4 (42-334)||(42723987-42724279)
chr4 (41-334)||(39540207-39540500)
chr4 (41-334)||(42348659-42348952)
chr4 (41-334)||(55215399-55215692)
chr4 (42-334)||(28406244-28406536)
chr4 (42-334)||(37234011-37234303)
chr4 (41-334)||(19873928-19874221)
chr4 (41-334)||(52912999-52913292)
chr4 (41-334)||(53874916-53875209)
chr4 (37-334)||(55219862-55220159)
chr4 (42-334)||(20434162-20434454)
chr4 (39-334)||(56362815-56363109)
chr4 (41-334)||(38291661-38291954)
chr4 (39-334)||(25857538-25857832)
chr4 (41-334)||(23895000-23895294)
chr4 (42-334)||(613823-614115)
chr4 (42-334)||(55183333-55183625)
chr4 (39-334)||(52839538-52839833)
chr4 (41-334)||(53035824-53036114)
chr4 (42-315)||(10541857-10542130)
chr4 (42-332)||(52307265-52307555)
chr4 (39-200)||(43830157-43830318)
chr4 (41-114)||(20737689-20737762)
chr4 (39-114)||(56018719-56018794)
chr4 (39-114)||(31709712-31709787)
chr4 (39-168)||(43458363-43458492)
chr4 (39-159)||(22847101-22847221)
chr4 (41-167)||(24896984-24897109)
chr4 (42-128)||(28803980-28804066)
chr4 (41-159)||(41202326-41202444)
chr4 (42-168)||(47467379-47467505)
chr4 (67-168)||(11682233-11682334)
chr4 (67-168)||(11690512-11690613)
chr4 (42-159)||(24034518-24034635)
chr4 (42-168)||(22301719-22301842)
chr4 (42-153)||(35339631-35339742)
chr4 (42-159)||(43621555-43621672)
chr4 (40-168)||(40430120-40430248)
chr4 (65-153)||(51322672-51322760)
chr4 (41-128)||(48990344-48990431)
chr4 (65-159)||(49306-49400)
chr4 (43-159)||(30217104-30217220)
chr4 (41-168)||(1522782-1522909)
chr4 (65-140)||(8713247-8713321)
chr4 (42-168)||(3026381-3026507)
chr4 (42-168)||(13962450-13962575)
chr4 (95-168)||(36851458-36851531)
chr4 (42-168)||(37683236-37683359)
chr4 (40-159)||(48349465-48349584)
chr4 (39-153)||(50561561-50561674)
chr4 (43-168)||(34159011-34159136)
chr4 (39-164)||(50469060-50469185)
chr4 (42-128)||(51322401-51322487)
chr4 (84-168)||(32135398-32135479)
chr4 (65-154)||(37828775-37828863)
chr4 (65-128)||(7318450-7318514)
[»] chr1 (53 HSPs)
chr1 (42-334)||(34270565-34270857)
chr1 (30-334)||(52044181-52044485)
chr1 (42-334)||(39569247-39569539)
chr1 (39-334)||(52024722-52025017)
chr1 (42-334)||(44721871-44722163)
chr1 (41-334)||(42948188-42948482)
chr1 (40-334)||(50727795-50728089)
chr1 (42-334)||(6653224-6653516)
chr1 (41-334)||(26150957-26151250)
chr1 (39-334)||(24317178-24317471)
chr1 (39-334)||(13942140-13942435)
chr1 (33-334)||(18909207-18909507)
chr1 (41-334)||(51677040-51677333)
chr1 (41-309)||(33010603-33010871)
chr1 (42-334)||(2482421-2482716)
chr1 (42-334)||(2138037-2138329)
chr1 (47-332)||(20581504-20581788)
chr1 (41-289)||(15932785-15933033)
chr1 (42-315)||(40400033-40400306)
chr1 (39-286)||(49823201-49823448)
chr1 (41-254)||(28852791-28853004)
chr1 (39-138)||(13240207-13240306)
chr1 (39-114)||(51290546-51290621)
chr1 (41-114)||(14247457-14247530)
chr1 (42-114)||(11173512-11173584)
chr1 (42-114)||(39982263-39982335)
chr1 (40-114)||(40536800-40536874)
chr1 (42-168)||(29922183-29922309)
chr1 (41-159)||(40498616-40498734)
chr1 (41-168)||(26307845-26307972)
chr1 (45-159)||(41712763-41712877)
chr1 (41-159)||(51001999-51002117)
chr1 (46-159)||(23444312-23444424)
chr1 (39-168)||(51776026-51776155)
chr1 (41-159)||(32086481-32086599)
chr1 (41-168)||(7009007-7009131)
chr1 (43-159)||(17474665-17474781)
chr1 (41-168)||(17605726-17605853)
chr1 (42-159)||(12601854-12601970)
chr1 (40-159)||(8114872-8114991)
chr1 (240-283)||(13240166-13240209)
chr1 (41-159)||(9640859-9640977)
chr1 (42-159)||(13146022-13146138)
chr1 (34-160)||(3485807-3485933)
chr1 (65-168)||(14290252-14290355)
chr1 (66-152)||(5672915-5673001)
chr1 (65-151)||(35273849-35273935)
chr1 (65-162)||(35841475-35841572)
chr1 (41-113)||(48933214-48933286)
chr1 (43-166)||(19514097-19514220)
chr1 (65-159)||(19247745-19247839)
chr1 (39-168)||(24527597-24527723)
chr1 (41-168)||(32561263-32561389)
[»] scaffold0391 (1 HSPs)
scaffold0391 (41-334)||(3874-4167)
[»] chr7 (51 HSPs)
chr7 (41-334)||(26015654-26015947)
chr7 (42-334)||(46321834-46322126)
chr7 (42-334)||(47065728-47066020)
chr7 (41-334)||(43246745-43247038)
chr7 (42-334)||(32541971-32542263)
chr7 (39-334)||(46923875-46924169)
chr7 (41-334)||(34591675-34591968)
chr7 (42-334)||(7900433-7900725)
chr7 (39-334)||(40995184-40995479)
chr7 (41-332)||(21278859-21279150)
chr7 (40-334)||(27324953-27325247)
chr7 (42-334)||(8215706-8215998)
chr7 (42-334)||(40705301-40705592)
chr7 (42-332)||(8203231-8203521)
chr7 (41-302)||(38875874-38876135)
chr7 (42-332)||(25876776-25877066)
chr7 (42-326)||(7790903-7791188)
chr7 (37-299)||(38283414-38283676)
chr7 (42-332)||(47779298-47779589)
chr7 (42-334)||(40994601-40994893)
chr7 (41-334)||(32662177-32662449)
chr7 (40-129)||(35924228-35924317)
chr7 (42-114)||(42095782-42095854)
chr7 (255-334)||(35924318-35924397)
chr7 (39-114)||(43047094-43047169)
chr7 (41-114)||(39074364-39074437)
chr7 (41-159)||(43775882-43776000)
chr7 (41-114)||(21874639-21874712)
chr7 (41-159)||(24980854-24980972)
chr7 (40-154)||(39597841-39597955)
chr7 (41-168)||(45870127-45870254)
chr7 (65-159)||(40862382-40862476)
chr7 (39-159)||(10594081-10594201)
chr7 (41-168)||(20492683-20492809)
chr7 (95-161)||(19021023-19021089)
chr7 (245-323)||(48642094-48642172)
chr7 (42-154)||(12847146-12847258)
chr7 (41-168)||(36688694-36688820)
chr7 (65-168)||(42436462-42436565)
chr7 (40-168)||(29042142-29042269)
chr7 (41-168)||(30173420-30173547)
chr7 (42-81)||(19687096-19687135)
chr7 (243-299)||(25765044-25765100)
chr7 (39-168)||(7883634-7883763)
chr7 (42-168)||(40305431-40305557)
chr7 (42-128)||(44709894-44709980)
chr7 (40-153)||(241680-241792)
chr7 (39-140)||(19473935-19474034)
chr7 (42-159)||(46101804-46101921)
chr7 (84-168)||(47540332-47540417)
chr7 (84-168)||(47546889-47546974)
[»] chr5 (42 HSPs)
chr5 (42-334)||(9065698-9065990)
chr5 (42-334)||(4155962-4156254)
chr5 (42-334)||(43293451-43293743)
chr5 (40-334)||(33280807-33281101)
chr5 (41-334)||(19034514-19034807)
chr5 (41-334)||(24559067-24559360)
chr5 (41-334)||(24600099-24600392)
chr5 (41-334)||(37865874-37866167)
chr5 (42-334)||(13145675-13145966)
chr5 (40-312)||(31527393-31527665)
chr5 (40-332)||(43518086-43518379)
chr5 (34-114)||(25084848-25084928)
chr5 (34-114)||(25142821-25142901)
chr5 (39-114)||(6469947-6470022)
chr5 (42-113)||(38760537-38760608)
chr5 (39-168)||(8232540-8232669)
chr5 (41-114)||(19617736-19617809)
chr5 (39-168)||(40738889-40739018)
chr5 (41-162)||(36294180-36294301)
chr5 (42-114)||(29920290-29920362)
chr5 (41-168)||(18864429-18864556)
chr5 (42-154)||(41881893-41882005)
chr5 (41-168)||(10666096-10666223)
chr5 (41-160)||(12189273-12189392)
chr5 (42-128)||(43548582-43548668)
chr5 (42-159)||(42437343-42437460)
chr5 (42-154)||(31484649-31484761)
chr5 (41-153)||(37340799-37340911)
chr5 (245-323)||(12189146-12189224)
chr5 (43-168)||(15272728-15272853)
chr5 (65-137)||(7338643-7338715)
chr5 (65-168)||(37274574-37274677)
chr5 (65-151)||(4621169-4621255)
chr5 (45-127)||(18978453-18978535)
chr5 (43-168)||(6245188-6245313)
chr5 (65-126)||(18522184-18522245)
chr5 (65-168)||(13210948-13211051)
chr5 (84-163)||(37105892-37105970)
chr5 (42-128)||(31498837-31498923)
chr5 (43-128)||(10552506-10552591)
chr5 (90-141)||(35319759-35319810)
chr5 (78-130)||(27308709-27308761)
[»] chr2 (36 HSPs)
chr2 (42-334)||(1481811-1482103)
chr2 (42-334)||(25853225-25853517)
chr2 (37-334)||(21657922-21658218)
chr2 (41-334)||(45505578-45505871)
chr2 (42-334)||(1520176-1520468)
chr2 (42-334)||(44143360-44143652)
chr2 (39-334)||(2390480-2390774)
chr2 (41-334)||(34202278-34202571)
chr2 (41-334)||(42342967-42343259)
chr2 (42-334)||(39697570-39697862)
chr2 (42-334)||(40811566-40811857)
chr2 (41-334)||(37094087-37094380)
chr2 (42-334)||(13195931-13196222)
chr2 (39-334)||(3178223-3178517)
chr2 (54-328)||(43577015-43577289)
chr2 (41-332)||(10638777-10639067)
chr2 (41-334)||(927063-927336)
chr2 (41-225)||(15011818-15012002)
chr2 (111-332)||(874953-875161)
chr2 (41-113)||(32551681-32551753)
chr2 (42-113)||(35895492-35895563)
chr2 (42-168)||(38629368-38629494)
chr2 (39-168)||(4331840-4331969)
chr2 (34-128)||(26170968-26171062)
chr2 (37-114)||(27980924-27980999)
chr2 (37-114)||(28067454-28067529)
chr2 (41-168)||(13480508-13480635)
chr2 (41-159)||(7722641-7722759)
chr2 (42-167)||(44798809-44798933)
chr2 (42-167)||(45443516-45443640)
chr2 (72-159)||(44456780-44456867)
chr2 (41-159)||(458577-458695)
chr2 (78-151)||(31569635-31569708)
chr2 (66-141)||(5109181-5109256)
chr2 (95-164)||(31640769-31640838)
chr2 (84-168)||(40659197-40659278)
[»] chr8 (50 HSPs)
chr8 (37-334)||(34564820-34565117)
chr8 (42-334)||(23357048-23357340)
chr8 (41-334)||(26122317-26122610)
chr8 (39-334)||(26290570-26290865)
chr8 (39-334)||(26303827-26304122)
chr8 (45-334)||(8376243-8376532)
chr8 (39-334)||(26337182-26337477)
chr8 (39-334)||(35605334-35605629)
chr8 (44-334)||(39365248-39365537)
chr8 (42-334)||(24822515-24822807)
chr8 (42-334)||(43664117-43664408)
chr8 (42-334)||(42512159-42512451)
chr8 (41-315)||(3032708-3032982)
chr8 (41-299)||(17122089-17122347)
chr8 (40-303)||(8656552-8656815)
chr8 (42-315)||(5988188-5988461)
chr8 (43-295)||(34917539-34917791)
chr8 (41-315)||(3137035-3137309)
chr8 (41-264)||(22439467-22439690)
chr8 (39-114)||(28909659-28909734)
chr8 (39-124)||(12713578-12713663)
chr8 (41-114)||(28885723-28885796)
chr8 (42-114)||(15839455-15839527)
chr8 (41-114)||(11587897-11587970)
chr8 (42-114)||(8013936-8014008)
chr8 (42-114)||(37577983-37578055)
chr8 (40-114)||(17601332-17601406)
chr8 (41-114)||(5599872-5599945)
chr8 (41-114)||(5640675-5640748)
chr8 (42-154)||(31793821-31793933)
chr8 (41-168)||(41942319-41942446)
chr8 (41-159)||(36057699-36057817)
chr8 (45-168)||(12722559-12722682)
chr8 (245-323)||(2828154-2828232)
chr8 (42-159)||(42687908-42688025)
chr8 (36-128)||(38234411-38234503)
chr8 (40-168)||(38460060-38460187)
chr8 (72-159)||(38168452-38168539)
chr8 (65-128)||(38945711-38945774)
chr8 (34-128)||(35329725-35329818)
chr8 (43-167)||(5347437-5347560)
chr8 (41-168)||(4005764-4005891)
chr8 (65-168)||(11266156-11266259)
chr8 (78-168)||(7969992-7970081)
chr8 (43-159)||(4229637-4229753)
chr8 (245-317)||(7969866-7969938)
chr8 (42-109)||(28620416-28620483)
chr8 (84-153)||(5552-5621)
chr8 (65-140)||(39712700-39712774)
chr8 (72-162)||(16571214-16571303)
[»] scaffold0368 (1 HSPs)
scaffold0368 (41-334)||(13861-14155)
[»] chr6 (24 HSPs)
chr6 (42-334)||(7141263-7141555)
chr6 (41-334)||(6625357-6625650)
chr6 (42-334)||(18893675-18893967)
chr6 (42-334)||(6167728-6168020)
chr6 (41-334)||(29122146-29122441)
chr6 (39-332)||(29630291-29630583)
chr6 (28-332)||(3094574-3094878)
chr6 (42-261)||(25335003-25335222)
chr6 (41-236)||(13889848-13890043)
chr6 (72-168)||(7081002-7081098)
chr6 (72-168)||(8811261-8811357)
chr6 (41-168)||(6925776-6925903)
chr6 (39-154)||(23350351-23350466)
chr6 (66-159)||(34085811-34085904)
chr6 (287-334)||(13889802-13889849)
chr6 (39-153)||(11369053-11369167)
chr6 (246-323)||(7081155-7081232)
chr6 (246-323)||(8811127-8811204)
chr6 (41-121)||(31091150-31091230)
chr6 (41-168)||(18024378-18024505)
chr6 (43-167)||(32173670-32173794)
chr6 (72-168)||(5714907-5715003)
chr6 (65-128)||(29623170-29623233)
chr6 (42-128)||(8525525-8525611)
[»] scaffold0438 (1 HSPs)
scaffold0438 (39-334)||(1907-2202)
[»] scaffold0276 (2 HSPs)
scaffold0276 (41-334)||(13842-14134)
scaffold0276 (42-292)||(12520-12770)
[»] scaffold0007 (2 HSPs)
scaffold0007 (42-331)||(156911-157199)
scaffold0007 (65-126)||(200056-200117)
[»] scaffold0248 (1 HSPs)
scaffold0248 (41-241)||(2909-3109)
[»] scaffold0065 (1 HSPs)
scaffold0065 (42-114)||(38424-38496)
[»] scaffold0896 (2 HSPs)
scaffold0896 (72-168)||(3708-3804)
scaffold0896 (246-323)||(3575-3651)
[»] scaffold0578 (1 HSPs)
scaffold0578 (43-166)||(8719-8842)
[»] scaffold0003 (1 HSPs)
scaffold0003 (72-168)||(365809-365905)
[»] scaffold0264 (1 HSPs)
scaffold0264 (85-162)||(13535-13612)


Alignment Details
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 20835680 - 20835387
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20835680 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 20835581  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20835580 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 20835481  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20835480 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 20835387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 22782005 - 22781712
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22782005 agagtttttctacttgcaccctagttaatcatggttgcaccacaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 22781906  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781905 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 22781806  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22781805 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 22781712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 37971771 - 37971479
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37971771 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcattcttt 37971672  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37971671 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccatt 37971572  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37971571 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 37971479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 38871119 - 38871412
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38871119 agagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 38871218  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38871219 ttttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 38871318  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  38871319 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgat 38871412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 25710883 - 25711178
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25710883 ttagagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 25710982  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  25710983 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccatattttctcacgtcc 25711082  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  25711083 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgat 25711178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 4516112 - 4515819
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4516112 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 4516013  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  4516012 ttttggttacaccccaaaacctttcttccaaaaccataattctccaatcgattcattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 4515913  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4515912 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 4515819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 4044908 - 4044613
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4044908 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 4044809  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4044808 ttttttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtcc 4044709  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  4044708 attcatgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgat 4044613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 42 - 331
Target Start/End: Complemental strand, 10841529 - 10841241
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10841529 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 10841430  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10841429 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 10841330  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttct 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  10841329 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttctcttgttatgggttctcagttct 10841241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 33712720 - 33712429
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33712720 agagtttttc-acttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 33712622  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33712621 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 33712522  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  33712521 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 33712429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 53974310 - 53974601
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  53974310 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattacccattcataaaatttgattttcaaaaagcctattccttcttt 53974409  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53974410 tttggttacaccccaaaacccttcttccaaaaccataattctccaatccatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 53974509  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  53974510 catgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 53974601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 41 - 332
Target Start/End: Complemental strand, 40586269 - 40585978
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  40586269 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 40586170  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40586169 ttttggttacaccccaaaacctttcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccat 40586070  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  40586069 tcatgattttaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctg 40585978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 42 - 331
Target Start/End: Original strand, 36430267 - 36430555
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  36430267 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattactctttgataaaatttgattttcaaaaagcctattccttcttt 36430366  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36430367 ttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 36430466  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttct 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  36430467 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttct 36430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 43 - 331
Target Start/End: Original strand, 41069837 - 41070123
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41069837 agtttttctacttgcaccctagttaatcatggttgcacct-aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctttt 41069935  T
Q  143 ttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41069936 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattc 41070035  T
Q  243 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttct 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  41070036 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttct 41070123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 42 - 328
Target Start/End: Complemental strand, 10999843 - 10999557
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  10999843 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 10999744  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || |||||| |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10999743 cttggttacatcccaaaacccctcttccaaaaccataattctgcaatagatcgattgtgttctgcgaagaatttcaaaaccatactttctcacgtccatt 10999644  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagt 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  10999643 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttcttatgggttctcagt 10999557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 42 - 331
Target Start/End: Original strand, 20048334 - 20048624
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  20048334 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 20048433  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20048434 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 20048533  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-atttttcttgttatgggttctcagttct 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  20048534 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctcagttct 20048624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 75 - 334
Target Start/End: Complemental strand, 6268422 - 6268163
Alignment:
Q  75 ttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttccaaaac 174  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  6268422 ttgcaccccaaaatgacaagattaccctttcctaaaatttgattttcaaaaagcctattccttctttttttattacaccccaaaaccgttcttccaaaac 6268323  T
Q  175 cataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcagg 274  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6268322 cataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcagg 6268223  T
Q  275 ttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  6268222 ttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttcttagttctgat 6268163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 33966894 - 33967173
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  33966894 agagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 33966993  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33966994 ttttggttacaccccaa--------------aaccataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatccat 33967079  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33967080 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 33967173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 41 - 286
Target Start/End: Complemental strand, 7156769 - 7156541
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  7156769 agagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgataagattaccctttcataaaatttgattttcaaagagtctattccttctt 7156670  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||  ||||||||||||||||| ||||||||||||||| |||||||| |||||||                 |||||||||||||||||||||||||| |    
T  7156669 tttaggttacaccccaaaacccctcttccaaaaccatatttctccaaacgatcga-----------------tttcaaaaccatactttctcacgtcctt 7156587  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7156586 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 7156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 32236130 - 32236204
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32236130 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 32236204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 84388 - 84460
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  84388 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 84460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 20657485 - 20657412
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  20657485 agagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 20657412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 26090200 - 26090273
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  26090200 agagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaattt 26090273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 7679794 - 7679722
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7679794 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 7679722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 24395096 - 24395167
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24395096 agtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 24395167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 36885838 - 36885711
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| ||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||| | |||||| ||    
T  36885838 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaattttattttcaaaaagcatcttccttttt 36885739  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  36885738 tcttggttacaccctaaaatccctcttc 36885711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 44354600 - 44354469
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 136  Q
    |||||||||||||||| || ||||||  |||||| |||||||||||||||||||||  ||||||||| |||||||||| ||||||||||| | ||||||     
T  44354600 tcttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaaacatattcca 44354501  T
Q  137 tcttttttagttacaccccaaaacccttcttc 168  Q
    | ||| || ||||||||| ||||  |||||||    
T  44354500 tttttcttggttacaccctaaaattcttcttc 44354469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 672065 - 672139
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  672065 tagagtttttctagttgcaccctagttaatcatggttgcactccaaaatgataagattaccctttcataaaattt 672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 35039572 - 35039689
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  35039572 gagtttttctaattacaccctttttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 35039671  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  35039672 cttggttacaccctaaaa 35039689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 7681100 - 7680981
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||| |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  7681100 gagtttttctaattacaccctatttaattctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 7681001  T
Q  142 tttagttacaccccaaaacc 161  Q
     || ||||||||| ||||||    
T  7681000 cttggttacaccctaaaacc 7680981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 30418687 - 30418816
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||||||| ||||| |||||||||||  |||||||||  ||||||||| ||||||||||||| | ||||||     
T  30418687 ttagagtttttctaattacaccctgtttaatcatggctgcactccaaaatgacagaattatccttctataaaatttaattttcaaaaagcatcttccttt 30418786  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| || ||||||||| ||||  |||||||    
T  30418787 tttcttggttacaccctaaaattcttcttc 30418816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 36232771 - 36232642
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || |||| |  |||||| ||||||||||| |||||||||| |||| ||||||||||||||| ||||| |||||| || ||||||     
T  36232771 ttagagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttccttt 36232672  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| || ||||||||| |||| || |||||    
T  36232671 tttcttggttacaccctaaaatccctcttc 36232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 38145338 - 38145211
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || || |||  |||||  ||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||| || |||||| ||    
T  38145338 agagtttttctaattacatcctgtttaattctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttttt 38145239  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  38145238 tcttggttacaccctaaaatccctcttc 38145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 47098357 - 47098274
Alignment:
Q  85 aaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    ||||||||| |||| |||| |||||||||| |||||||||||| || |||||||||| || |||||||||||||||||||||||    
T  47098357 aaatgacaaaattacccttgcataaaatttcattttcaaaaagtctcttccttctttcttggttacaccccaaaacccttcttc 47098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 33392508 - 33392606
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 137  Q
    |||||||||||||| || ||||||| |||||| |||||  ||||||||||||||| |||| | ||||||||||||| |||||||||||| || ||||||    
T  33392508 ttagagtttttctaattacaccctatttaatcctggttataccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagtcttttcctt 33392606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 49779928 - 49779834
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    |||||| |||||||| ||||||||||||| |||||| ||||||||||||| ||||||||||||| | |||||| ||| || ||||||||| ||||    
T  49779928 ttaatcttggttgcatcccaaaatgacaaaattatcttttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 49779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 11123858 - 11123984
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||| ||| |||||| ||||||| |||||||||||||| |||| |||| |||||||||| ||||||||||||  | || ||| |||    
T  11123858 gagtttttctaattacactctatttaatcctggttgcgccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatctttctttttt 11123957  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  11123958 cttggttacaccctaaaatccctcttc 11123984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 39627176 - 39627093
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    |||||||||| |||||||||| ||||||||| ||||| ||||||  | ||||||||||||| ||||||||||||||||| |||||    
T  39627176 aaaatgacaaaattatccttttataaaattt-atttttaaaaagtattttccttcttttttggttacaccccaaaacccctcttc 39627093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 48584857 - 48584920
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||||| |||||| || |||||||||||| |||||||||||||||||||| |||||||||||||    
T  48584857 ttaatcctggttgtactccaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 48584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 2613424 - 2613306
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||| |||||| || ||||||  |||||| ||||||||   |||||||| || |||||||||||||||||||| ||||||||||| | | |||||| ||    
T  2613424 agagtatttctaattacaccctgtttaatcttggttgcatttcaaaatgataaaattatcctttcataaaatttaattttcaaaaaacatcttccttttt 2613325  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  2613324 tcttggttacaccctaaaa 2613306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 47098217 - 47098139
Alignment:
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||| ||||||||||| ||||||||| ||||||||||||  |||||||||||| ||| | |||||||||| ||||||||    
T  47098217 gattgcaaagaaaatttgaagcaaataaggttagcaagttgtgttcttcaatcaattatgtttttcttgtcatgggttc 47098139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 36841202 - 36841085
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || || |||  |||||| |||||| ||| |||||||| || |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  36841202 gagtttttctaattacatcctttttaatcctggttgtacctcaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 36841103  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  36841102 cttggttacaccctaaaa 36841085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 4596526 - 4596411
Alignment:
Q  38 cttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 137  Q
    ||||||||||||||| || || |||  |||||| | |||||| ||||||||||||| |||| |||| ||||||| || ||||||||||||| | ||||||    
T  4596526 cttagagtttttctaattacatcctgtttaatcctagttgcatcccaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatcttcctt 4596428  T
Q  138 cttttttagttacaccc 154  Q
     ||| || |||||||||    
T  4596427 ttttcttggttacaccc 4596411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 22786369 - 22786329
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcacc 81  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22786369 agagtttttctacttgcaccctagttaatcatggttgcacc 22786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 51662236 - 51662148
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacacc 153  Q
    |||||| |||||||| || ||||||| || ||||||||| |||||||||| ||||||||||||| | |||||| ||| || ||||||||    
T  51662236 ttaatcctggttgcatcctaaaatgataaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacacc 51662148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 8947927 - 8947833
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttctt 167  Q
    ||||| ||| || ||||||||| |||||| ||||||| | ||||||||||||||||||| |||||||||  || ||||||||| ||||||| ||||    
T  8947927 tggttacactccgaaatgacaaaattatc-tttcatatagtttgattttcaaaaagcctcttccttcttcctttgttacaccctaaaacccctctt 8947833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 19941680 - 19941799
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||| || ||| ||  |||||  ||||||||| | ||||||| || ||||| ||| |||||||||| ||||||||||||| | |||||| |    
T  19941680 tagagtttttctaattacacactgtttaattctggttgcactctaaaatgataaaattattcttccataaaatttaattttcaaaaagcatcttcctttt 19941779  T
Q  140 tttttagttacaccccaaaa 159  Q
    || || ||||||||| ||||    
T  19941780 ttctttgttacaccctaaaa 19941799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 54556376 - 54556467
Alignment:
Q  71 atggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccc 162  Q
    |||||| || || ||||||| || |||| ||||||||||||||||||||| ||||||  | |||||||| | || |||||||||||||||||    
T  54556376 atggttacatcctaaaatgataaaattaccctttcataaaatttgatttttaaaaagtttcttccttctctcttggttacaccccaaaaccc 54556467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 1774218 - 1774296
Alignment:
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||||||||||||||| ||||||||| ||||||| |||   |||||||||||||||| | |||| ||||| ||||||||    
T  1774218 gatttcaaagaaaatttgaagcaaataaggttaggaagctatgttcttcaatcgattatgttttacttgtcatgggttc 1774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 11095647 - 11095773
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||| |||||| |||||||| |  |||||||||| | || ||||  |||| |||| ||||||||||||| | |||||| |||    
T  11095647 gagtttttctaattacaccctatttaatcctggttgcatcataaaatgacaaaaatacccttctataatatttaattttcaaaaagcatcttcctttttt 11095746  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  11095747 cttggttacaccctaaaatccctcttc 11095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 52343124 - 52343208
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    |||||||||| ||||| ||| |||||||||| ||||||||||||| | |||||| ||| || ||||||||| |||| || |||||    
T  52343124 aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccatcttc 52343208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 14279129 - 14279232
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    |||||| ||||||||||| |||||||||| ||||   || |||||||||| ||||||||||||| | ||| || ||| || ||||||||| |||| || |    
T  14279129 ttaatcctggttgcaccctaaaatgacaaaattacttttccataaaatttaattttcaaaaagcatgttcattttttcttggttacaccctaaaatccct 14279228  T
Q  165 cttc 168  Q
    ||||    
T  14279229 cttc 14279232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 52812168 - 52812237
Alignment:
Q  83 caaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacac 152  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||||||| | |||||| ||| || |||||||    
T  52812168 caaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 52812237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 42724279 - 42723987
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42724279 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 42724180  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42724179 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 42724080  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42724079 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 42723987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 39540500 - 39540207
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39540500 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 39540401  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39540400 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 39540301  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39540300 tcatgatttcaaagaaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 39540207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 42348659 - 42348952
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42348659 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 42348758  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42348759 ttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 42348858  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42348859 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 42348952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 55215692 - 55215399
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55215692 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 55215593  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55215592 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 55215493  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  55215492 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttattcaatcgattgtgtttttcttgttacgggttctcagttctgat 55215399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 28406536 - 28406244
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28406536 gagtttttctccttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagtctattccttcttt 28406437  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28406436 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 28406337  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28406336 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 28406244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 37234303 - 37234011
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37234303 gagtttttctacttgcaccttagttaattatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 37234204  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37234203 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 37234104  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37234103 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 37234011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 19874221 - 19873928
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19874221 agagtttttctacttgcaccctacttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 19874122  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19874121 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 19874022  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19874021 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 19873928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 52913292 - 52912999
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52913292 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 52913193  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52913192 ttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 52913093  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52913092 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 52912999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 53875209 - 53874916
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  53875209 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 53875110  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53875109 ttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 53875010  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53875009 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 53874916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 37 - 334
Target Start/End: Original strand, 55219862 - 55220159
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55219862 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcct 55219961  T
Q  137 tcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 236  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55219962 tcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacat 55220061  T
Q  237 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  55220062 ccattcatgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctcagttctgat 55220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 20434162 - 20434454
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20434162 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 20434261  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434262 tttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 20434361  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20434362 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 20434454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 56362815 - 56363109
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  56362815 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttc 56362914  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56362915 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 56363014  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  56363015 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctccgttctgat 56363109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 38291954 - 38291661
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38291954 agagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttctt 38291855  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38291854 ttttggttacaccctaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 38291755  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  38291754 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatccattgtgtttttcttgttatgggttctcagttctgat 38291661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 25857538 - 25857832
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  25857538 ttagagtttttctacttgcaccctaat-aatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttc 25857636  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25857637 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtcc 25857736  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25857737 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 25857832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 23895294 - 23895000
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895294 agagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 23895195  T
Q  141 ttttag-ttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    |||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895194 tttttggttacaccccaaaaccattcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 23895095  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23895094 ttcatgatttcgaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 23895000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 613823 - 614115
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  613823 gagtttttctacttgcaccccagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctct 613922  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  613923 tttggttacaccccaaaacccttcttccaaaaccataattctgcaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 614022  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  614023 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttcttagttctgat 614115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 55183625 - 55183333
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  55183625 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattactctttcataaaatttgattttcaaaaagcctattccttcttt 55183526  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  55183525 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaataccatactttctcacgtccatt 55183426  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  |||||||    
T  55183425 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctcttttctgat 55183333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 52839833 - 52839538
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  52839833 ttagagtttttctacttgcatcctagttaatcatggttgcaccccaaaacgacaaaattaccctttcataaaatttgattttcaaaaagcttattccttc 52839734  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52839733 ttttttggttacaccccaaaacccttcttccaaaaccatgattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 52839634  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  52839633 attcatgatttcaaagaaaattcgaagcaaatcaggttatcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgat 52839538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 53036114 - 53035824
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||    
T  53036114 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaa---cctattccttctt 53036018  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53036017 ttttggttacaccccaaaacccttcttccaaaaccataattatccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 53035918  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  53035917 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaaatgttgttcttcaatcgattgtatttttcttgttacggattctcagttctgat 53035824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 42 - 315
Target Start/End: Complemental strand, 10542130 - 10541857
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  10542130 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattctttcttt 10542031  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10542030 cttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 10541931  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgtt 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  10541930 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttccttgtt 10541857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 42 - 332
Target Start/End: Complemental strand, 52307555 - 52307265
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52307555 gagtttttctacttacaccctagttaatcatggttgcatcctaaaatgataagattatcctttcataaaatttaattttcaaaaagcctattccttcttt 52307456  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  52307455 cttggttacaccccaaaattcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgatgatttttaaaatcatactttctcacgtccatt 52307356  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52307355 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctg 52307265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 39 - 200
Target Start/End: Complemental strand, 43830318 - 43830157
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  43830318 ttagagtttttctccttgcaccctagttaatcatggttgcacctcaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttc 43830219  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtg 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43830218 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtg 43830157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 20737689 - 20737762
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20737689 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 20737762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 56018794 - 56018719
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  56018794 ttagagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 56018719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 31709712 - 31709787
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  31709712 ttagagtttttctacttgcaccctaattaatcatggttgcaccttaaaatgacaagattatccttttataaaattt 31709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 43458492 - 43458363
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||| || || ||||||  ||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||  | ||||||     
T  43458492 ttagagtttttataattacaccctgtttaatcatggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatcttccttt 43458393  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| || ||||||||| |||| || |||||    
T  43458392 tttcttggttacaccctaaaatccctcttc 43458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 22847101 - 22847221
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| |||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||| | |||| |     
T  22847101 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatcttttcataaaatttaattttcaaaaagcatcttccgtt 22847200  T
Q  139 ttttttagttacaccccaaaa 159  Q
    ||||||  |||||||| ||||    
T  22847201 tttttttattacaccctaaaa 22847221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 24896984 - 24897109
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||| ||||| |||||||||||||||| ||||  |||||||||||||| | ||||||||||||| |||||| ||    
T  24896984 agagtttttctaattacaccttgtttaatcctggttacaccccaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcctt-tt 24897082  T
Q  141 ttttagttacaccccaaaacccttctt 167  Q
    | |  ||||||||||||||||| ||||    
T  24897083 tgtcggttacaccccaaaacccctctt 24897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 28804066 - 28803980
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||| |||||||||  ||||||||||||| |||| |||||||||| |||| |||| |||||||||| |||||||||||||    
T  28804066 gagtttttctaattgcaccctgtttaatcatggttgtaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagc 28803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 41202444 - 41202326
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||| |||||||||||||||||||||  ||||||||| |||||||||| |||||||||| || | |||||| ||    
T  41202444 agagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaatgcatcttccttttt 41202345  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  41202344 tcttggttacaccctaaaa 41202326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 47467505 - 47467379
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  ||||||||||||||| ||||||||||||| |||| |||| ||||||||||  |||| ||||||| | |||||| |||    
T  47467505 gagtttttctaattacaccctgtttaatcatggttgcatcccaaaatgacaaaattacccttccataaaatttagtttttaaaaagcatcttcctttttt 47467406  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  47467405 cttggttacaccctaaaatccctcttc 47467379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 11682233 - 11682334
Alignment:
Q  67 aatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttct 166  Q
    |||| ||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||| | |||||| ||| || ||||||||| |||| || |||    
T  11682233 aatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctct 11682332  T
Q  167 tc 168  Q
    ||    
T  11682333 tc 11682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 11690512 - 11690613
Alignment:
Q  67 aatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttct 166  Q
    |||| ||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||| | |||||| ||| || ||||||||| |||| || |||    
T  11690512 aatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctct 11690611  T
Q  167 tc 168  Q
    ||    
T  11690612 tc 11690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 24034518 - 24034635
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||  |||||| ||||||||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  24034518 gagtttttctaattacaccctgtttaattctggttgtaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 24034617  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  24034618 cttggttacaccctaaaa 24034635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 22301842 - 22301719
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| |  ||||||  |||||| ||||||||||||||||| |||| |||| ||||||||||||||| ||||| ||||||||| |||||||||     
T  22301842 gagtttttctaatcacaccctgtttaatcctggttgcaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttc 22301744  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
    |   | ||||||||||||||| |||||    
T  22301743 tc--ggtacaccccaaaacccctcttc 22301719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 35339742 - 35339631
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || |||| |  |||||| ||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||| | ||| || |||    
T  35339742 gagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaagattacccttccataaaatttaattttcaaaaagcatcttcatttttt 35339643  T
Q  142 tttagttacacc 153  Q
     || ||||||||    
T  35339642 cttggttacacc 35339631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 43621672 - 43621555
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| || ||||| || |||||||||| |||||||||| ||||||||| ||||||||||| | | |||||| |||    
T  43621672 gagtttttctaattacaccctttttaatcctgattgcatcctaaaatgacaaaattatccttttataaaatttaattttcaaaaatcatcttcctttttt 43621573  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  43621572 cttggttacaccctaaaa 43621555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 40430120 - 40430248
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||| || || | |  |||||| ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||||||| | ||| || |    
T  40430120 tagagtttttctaattacatcatgtttaatcctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcttttt 40430219  T
Q  140 tttttagttacaccccaaaacccttcttc 168  Q
    || || ||||||||| |||| || |||||    
T  40430220 ttcttggttacaccctaaaatccctcttc 40430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 51322672 - 51322760
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacacc 153  Q
    |||||| |||||||||| |||||||| || |||||||||||||||||||| ||||||||||||| | || ||| ||| || ||||||||    
T  51322672 ttaatcttggttgcacctcaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatttttcttttttcttggttacacc 51322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 48990344 - 48990431
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||||||||||| || ||||||| |||||| | ||||||||| ||||||| || |||| |||| |||||||||| |||||||||||||    
T  48990344 agagtttttctaattacaccctatttaatcctcgttgcaccctaaaatgataaaattacccttccataaaatttaattttcaaaaagc 48990431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 49400 - 49306
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    |||||| ||||||||| | |||||||||| |||| ||||||||||||||| ||||| ||||||| | |||||| ||| || ||||||||| ||||    
T  49400 ttaatcttggttgcactctaaaatgacaaaattaccctttcataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaa 49306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 30217220 - 30217104
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || |  |||| |||||| ||||||||    |||||||||| ||||||||| |||||||||| ||||||||||||| | |||||| |||     
T  30217220 agtttttctaattacgtcctatttaatcctggttgcatttaaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttc 30217121  T
Q  143 ttagttacaccccaaaa 159  Q
    || ||||||||| ||||    
T  30217120 ttggttacaccctaaaa 30217104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 1522782 - 1522909
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| ||  |||||  |||||| |||||||| || |||||||||| ||||  ||| |||||||||| ||||||||||||| | || ||| ||    
T  1522782 agagtttttctaattataccctgtttaatcctggttgcatcctaaaatgacaaaattactcttccataaaatttaattttcaaaaagcatctttcttttt 1522881  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  1522882 tcttggttacaccctaaaatccctcttc 1522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 8713247 - 8713321
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||| | ||| |||||||||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  8713247 ttaatccttgttacaccccaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 8713321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 3026381 - 3026507
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| ||  |||||  | |||| || ||||| || |||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  3026381 gagtttttctaattaaaccctgttaaatcctgattgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 3026480  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  3026481 cttggttacaccctaaaatccctcttc 3026507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 13962575 - 13962450
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| | |||||||||||||||||||| |||| | || ||||||| || ||||||||||||| |  ||||| |||    
T  13962575 gagtttttctaattacaccctgtttaatcctagttgcaccccaaaatgacaaaattacctttccataaaa-ttaattttcaaaaagcatcatcctttttt 13962477  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  13962476 cttggttacaccctaaaatccctcttc 13962450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 36851458 - 36851531
Alignment:
Q  95 attatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    |||| ||||||||||||||| |||||||||||| || |||||| ||| |||||||||||| |||| || |||||    
T  36851458 attaccctttcataaaatttaattttcaaaaagactcttccttttttcttagttacaccctaaaatccctcttc 36851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 37683359 - 37683236
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| |  ||||||  |||||| ||||| ||| |||||||| ||| |||||| ||||||||||||| ||||| ||||||| | |||||||  |    
T  37683359 gagtttttctaatcacaccctgtttaatcctggttacactccaaaatgtcaaaattatcatttcataaaatttaatttt-aaaaagcatcttccttc--t 37683263  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
    | | |||||||||||||| || |||||    
T  37683262 tctcgttacaccccaaaatccctcttc 37683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 48349584 - 48349465
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||| || |||| |  |||||| |||||| || | ||||||| || |||| | ||| ||||||||| |||||||||||| || |||||| |    
T  48349584 tagagtttttctaattacaccttgtttaatcctggttgtactctaaaatgataaaattacctttttataaaatttaattttcaaaaagactcttcctttt 48349485  T
Q  140 tttttagttacaccccaaaa 159  Q
    || || ||||||||| ||||    
T  48349484 ttcttggttacaccctaaaa 48349465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 50561561 - 50561674
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||| ||  |||||| ||||||||| | |||||||||| |||| |||| ||||||| || ||||||||||||| | || |||     
T  50561561 ttagagtttttctaattacactctgtttaatcctggttgcactctaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatctttcttt 50561659  T
Q  139 ttttttagttacacc 153  Q
    ||| || ||||||||    
T  50561660 tttcttggttacacc 50561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 34159011 - 34159136
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || |||| |  |||||  |||||||| |  |||||||||| |||||||||  ||||||||| ||||||||||||| | ||| || |||     
T  34159011 agtttttctaattacaccttgtttaattctggttgcatcttaaaatgacaaaattatccttctataaaatttaattttcaaaaagcatcttcattttttc 34159110  T
Q  143 ttagttacaccccaaaacccttcttc 168  Q
    || ||||||||| |||| || |||||    
T  34159111 ttggttacaccctaaaatccctcttc 34159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 50469060 - 50469185
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || || |||  |||||| |||||| || | ||||||| || |||||||||  ||||| ||| ||||| ||||||| | ||||||     
T  50469060 ttagagtttttctaattacatcctgtttaatcctggttgtactctaaaatgataaaattatccttctataaactttaatttttaaaaagcatcttccttt 50469159  T
Q  139 ttttttagttacaccccaaaaccctt 164  Q
    ||| || ||||||||| |||| ||||    
T  50469160 tttcttggttacaccctaaaatcctt 50469185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 51322487 - 51322401
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||| || ||| ||  |||||  |||||||| ||||||| || || |||| |||| |||||||||| |||||||||||||    
T  51322487 gagtttttctaattacactctgtttaattctggttgcatcccaaaaggataaaattacccttccataaaatttaattttcaaaaagc 51322401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 32135398 - 32135479
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    |||||||||| |||| | ||||||||||||| ||||| ||||||||| ||||||||| |   | ||||||||||||||| |||||    
T  32135398 aaaatgacaaaattaccttttcataaaatttaatttt-aaaaagcctcttccttcttctc--ggtacaccccaaaacccctcttc 32135479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 37828775 - 37828863
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccc 154  Q
    |||||| ||||||||   |||||| |||| |||| ||| ||||||||||| ||||||||||| | | |||||| |||||| |||||||||    
T  37828775 ttaatcttggttgcatatcaaaataacaaaattaccctctcataaaatttaattttcaaaaaacatcttcctt-ttttttggttacaccc 37828863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 7318450 - 7318514
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttc-ataaaatttgattttcaaaaagc 128  Q
    |||||| || ||||||| |||||| |||| ||||||| ||| ||||||||| |||||||||||||    
T  7318450 ttaatcctgattgcacctcaaaattacaaaattatcccttccataaaatttaattttcaaaaagc 7318514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 34270857 - 34270565
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 34270758  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34270757 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccatt 34270658  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34270657 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 34270565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 30 - 334
Target Start/End: Complemental strand, 52044485 - 52044181
Alignment:
Q  30 ctaaaaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcc 129  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  52044485 ctaaaactattagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcc 52044386  T
Q  130 tattccttcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatacttt 229  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52044385 tattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatacttt 52044286  T
Q  230 ctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagtt 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  52044285 ctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagtt 52044186  T
Q  330 ctgat 334  Q
    |||||    
T  52044185 ctgat 52044181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 39569539 - 39569247
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39569539 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 39569440  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39569439 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatcgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39569340  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39569339 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 39569247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 52024722 - 52025017
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  52024722 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaggattaccctttcataaaatttgattttcaaaaagcctattccttc 52024821  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52024822 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcatgtcc 52024921  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52024922 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 52025017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 44721871 - 44722163
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44721871 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 44721970  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44721971 tttggttacaccccaaaacccttcttccaaaaccataattctctaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 44722070  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44722071 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 44722163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 42948188 - 42948482
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42948188 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 42948287  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42948288 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 42948387  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttc-aatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  42948388 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaaatcgattgtgtttttcttgttatgggttctcagttctgat 42948482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 40 - 334
Target Start/End: Original strand, 50727795 - 50728089
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50727795 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctttt 50727894  T
Q  140 tttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50727895 ttttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtcca 50727994  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  50727995 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaattgattgtgtttttcttgttgtgggttctcagttctgat 50728089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 6653224 - 6653516
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  6653224 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgactttcaaaaagcctattccttcttt 6653323  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6653324 tttggttacaccccaaaactcttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 6653423  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6653424 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 6653516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 26151250 - 26150957
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26151250 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcatattccttctt 26151151  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26151150 ttttggttacaccctaaaactcttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 26151051  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26151050 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 26150957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 24317178 - 24317471
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24317178 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 24317277  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24317278 ttttttggttacaccccaaaacccttcttccaaa-ccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 24317376  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  24317377 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattat-gttttcttgttatgggttctcagttctgat 24317471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 13942140 - 13942435
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13942140 ttagagtttttctacttgcaccctatttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 13942239  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  13942240 ttttttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgtttttcgaagattttcaaaaccatactttctcacgtcc 13942339  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  13942340 attcatgatttcaaagaaaatttaaagcaaatcaggttagcaagtgttgttcttcactcgattgtgtttttcttattatgggttctcagttctgat 13942435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 33 - 334
Target Start/End: Original strand, 18909207 - 18909507
Alignment:
Q  33 aaaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctat 132  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  18909207 aaaatctt-gagtttttctacttacaccctagttaatcatggttgcattccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctat 18909305  T
Q  133 tccttcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctc 232  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18909306 tctttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctc 18909405  T
Q  233 acgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  18909406 acgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttttg 18909505  T
Q  333 at 334  Q
    ||    
T  18909506 at 18909507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 51677333 - 51677040
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||| ||||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51677333 agagtttttctacttgcaccctagttaatcatagttgcattctaaaatgacaagattatcctttcataaaatttgatttacaaaaagcctattccttctt 51677234  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51677233 ttttggttacaccccaaaactcttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 51677134  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51677133 tcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 51677040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 41 - 309
Target Start/End: Complemental strand, 33010871 - 33010603
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33010871 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 33010772  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33010771 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 33010672  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtattttt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33010671 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 33010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 2482716 - 2482421
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  2482716 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttcttt 2482617  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcac----gtc 237  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    |||    
T  2482616 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccgtc 2482517  T
Q  238 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2482516 cattcatgatttcaaag-aaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 2482421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 2138329 - 2138037
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  2138329 gagtttttctacttgcactctagttaatcatggttgcacctcaaaatgataagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 2138230  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2138229 tttggttacaccccaaaacccttcttccaaaactataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 2138130  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2138129 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 2138037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 47 - 332
Target Start/End: Original strand, 20581504 - 20581788
Alignment:
Q  47 tttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttag 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  20581504 tttctacttgcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttgg 20581603  T
Q  147 ttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatga 246  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20581604 ttacaccc-aaaacccctcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccattcatga 20581702  T
Q  247 tttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20581703 tttcaaagaaaattcgaagcaaattatgttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctg 20581788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 41 - 289
Target Start/End: Original strand, 15932785 - 15933033
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15932785 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 15932884  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15932885 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccat 15932984  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15932985 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 15933033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 42 - 315
Target Start/End: Original strand, 40400033 - 40400306
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  40400033 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 40400132  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40400133 cttggttacatcccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40400232  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgtt 315  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  40400233 caggatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttccttgtt 40400306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 39 - 286
Target Start/End: Original strand, 49823201 - 49823448
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  49823201 ttagagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattacccttttataaaatttgattttcaaaaagcctattccttc 49823300  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49823301 ttttttggttacaccccaaaacccttcttccgaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtcc 49823400  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 286  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49823401 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgtt 49823448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 28853004 - 28852791
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28853004 agagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 28852905  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28852904 ttttggttacaccccaaaacccttcttccaaaactataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 28852805  T
Q  241 tcatgatttcaaag 254  Q
    ||||||||||||||    
T  28852804 tcatgatttcaaag 28852791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 13240306 - 13240207
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  13240306 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaagagtctattccttc 13240207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 51290546 - 51290621
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51290546 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 51290621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 14247530 - 14247457
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14247530 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 14247457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 11173584 - 11173512
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11173584 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 11173512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 39982263 - 39982335
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39982263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 39982335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 40536874 - 40536800
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  40536874 tagagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaattt 40536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 29922309 - 29922183
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| ||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||| || |||||| |||    
T  29922309 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctttttt 29922210  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  29922209 cttggttacaccctaaaatccctcttc 29922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 40498616 - 40498734
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||  |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| | |||||| ||    
T  40498616 agagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcatcttccttttt 40498715  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  40498716 tcttggttacaccctaaaa 40498734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 26307845 - 26307972
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| ||||||||||  |||||||||| ||||||||| |||||||||| ||||||||||||| | |||||| ||    
T  26307845 agagtttttctaattacaccctgtttaatcttggttgcaccttaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttt 26307944  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  26307945 tcttggttacaccctaaaatccatcttc 26307972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 41712763 - 41712877
Alignment:
Q  45 tttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttttt 144  Q
    |||||||| || ||||||  |||||| |||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||| | |||||| ||| ||    
T  41712763 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttttctt 41712862  T
Q  145 agttacaccccaaaa 159  Q
     ||||||||| ||||    
T  41712863 ggttacaccctaaaa 41712877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 51002117 - 51001999
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| ||  |||||  |||||| || |||||||| |||||||||| |||||||||||||||||||| ||||||||||||| | |||||| ||    
T  51002117 agagtttttctaattataccctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttccttttt 51002018  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  51002017 tcttggttacaccctaaaa 51001999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 46 - 159
Target Start/End: Complemental strand, 23444424 - 23444312
Alignment:
Q  46 ttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttttta 145  Q
    ||||||| || ||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||| |||||| | |||||| ||| ||     
T  23444424 ttttctaattacaccctatttaatcttggttgcaccccacaatgacaaaattatcctttcataaaatttaattttc-aaaagcatcttccttttttcttg 23444326  T
Q  146 gttacaccccaaaa 159  Q
    ||||||||| ||||    
T  23444325 gttacaccctaaaa 23444312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 51776026 - 51776155
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| |||||||| ||||||||||||| |||| |||| |||||||||| ||||| ||||||| | ||||||     
T  51776026 ttagagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttccttt 51776125  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| || ||||||||| |||| || |||||    
T  51776126 tttcttggttacaccctaaaatccctcttc 51776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 32086481 - 32086599
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| || ||||||||||||||||||  ||||||||| |||||||||| |||||||||| || | |||||| ||    
T  32086481 agagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaggcatcttccttttt 32086580  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  32086581 tcttggttacaccctaaaa 32086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 7009007 - 7009131
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| |  ||||||  |||||| ||||| ||||||||||| |||| |||| ||||||||||||||| ||||| ||||||||| |||||||      
T  7009007 agagtttttctaatcacaccctgtttaatcctggttacaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc-- 7009103  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    |||| | ||||||||||||||| |||||    
T  7009104 ttttcggtacaccccaaaacccctcttc 7009131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 17474665 - 17474781
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || || |||  |||||| |||||||| || |||||||||| |||||||||||||||||||| ||||||||||||  | |||||| |||     
T  17474665 agtttttctaattacatcctctttaatcctggttgcatcctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagaatcttccttttttc 17474764  T
Q  143 ttagttacaccccaaaa 159  Q
    || ||||||||| ||||    
T  17474765 ttggttacaccctaaaa 17474781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 17605726 - 17605853
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||   ||||| ||||||||||| |||||||||| |||| | || |||||||||| ||||||||||||| | |||||| ||    
T  17605726 agagtttttctaattacaccctgtgtaatcctggttgcaccctaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatcttccttttt 17605825  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  17605826 tcttggttacaccctaaaatccctcttc 17605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 12601854 - 12601970
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||  |||||||| || |||||||||| ||||| ||| |||||||||| ||||||||||||| | |||||| |||    
T  12601854 gagtttttctaattacaccctgtttaattctggttgcatcc-aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttcctttttt 12601952  T
Q  142 tttagttacaccccaaaa 159  Q
    ||| ||||||||| ||||    
T  12601953 tttggttacaccctaaaa 12601970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 8114991 - 8114872
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||||||||| || || ||| ||  |||||| ||||||||||| |||||||||| ||||||||| || ||||||| ||||||||||||| | ||| || |    
T  8114991 tagagtttttttaattacacactgtttaatcctggttgcaccctaaaatgacaaaattatccttccagaaaatttaattttcaaaaagcatcttcttttt 8114892  T
Q  140 tttttagttacaccccaaaa 159  Q
    || || ||||||||| ||||    
T  8114891 ttcttggttacaccctaaaa 8114872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 13240209 - 13240166
Alignment:
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13240209 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagt 13240166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 9640977 - 9640859
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  | |||| |||||||| || |||||||||| |||| ||||| ||||||||| ||||||||||||| | ||| || ||    
T  9640977 agagtttttctaattacacccttttcaatcctggttgcatcctaaaatgacaaaattacccttttataaaatttaattttcaaaaagcatcttctttttt 9640878  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  9640877 tcttggttacaccctaaaa 9640859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 13146022 - 13146138
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| ||||||||||| |||||||||| ||||  ||| ||||||| || ||||||||||||| | |||||| |||    
T  13146022 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattactcttccataaaa-ttaattttcaaaaagcatcttcctttttt 13146120  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  13146121 cttggttacaccctaaaa 13146138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 3485807 - 3485933
Alignment:
Q  34 aaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaa-tttgattttcaaaaagcctat 132  Q
    |||||| ||||||||| || || ||||||  |||||| ||||| |||  |||||| |||| |||||||||| |||||| ||| ||||||||||||||| |    
T  3485807 aaatctaagagtttttttaattacaccctgtttaatcttggttacacttcaaaataacaaaattatccttttataaaaatttaattttcaaaaagcctct 3485906  T
Q  133 tccttcttttttagttacaccccaaaac 160  Q
    ||||| ||| |  |||||||||||||||    
T  3485907 tcctt-tttctcggttacaccccaaaac 3485933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 14290355 - 14290252
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    |||||| ||||||||||  |||||||||| |||| |||| |||||||||| ||||||||||||| | || ||| ||| || ||||||||| |||| || |    
T  14290355 ttaatcctggttgcaccttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatctttcttttttcttggttacaccctaaaatccct 14290256  T
Q  165 cttc 168  Q
    ||||    
T  14290255 cttc 14290252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 5672915 - 5673001
Alignment:
Q  66 taatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacac 152  Q
    ||||| |||||||| || |||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| ||| || |||||||    
T  5672915 taatcctggttgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 5673001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 35273849 - 35273935
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttaca 151  Q
    |||||| |||||||| || |||||||||  ||||||||| |||||||||| ||||||||||||| | |||||| ||| || ||||||    
T  35273849 ttaatcctggttgcatcctaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttaca 35273935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 35841475 - 35841572
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccc 162  Q
    |||||||| ||| || | |||||| |||| ||||||||| |||||||||| |||||||||||| || || ||||||  || |||||| ||||||||||    
T  35841475 ttaatcatagttacatctcaaaataacaaaattatccttccataaaatttaattttcaaaaagtctctttcttcttactttgttacaacccaaaaccc 35841572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 48933214 - 48933286
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatt 113  Q
    |||||||||||| || ||||||  ||||||||||||||||| |||||||| || |||| |||| |||||||||    
T  48933214 agagtttttctaattacaccctgattaatcatggttgcacctcaaaatgataaaattacccttccataaaatt 48933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 19514220 - 19514097
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || ||||||  |||||| |||||||| |  ||||| |||| ||||  ||| |||||||||| ||||||||||||| | |||||| |||     
T  19514220 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttccttttttc 19514121  T
Q  143 ttagttacaccccaaaacccttct 166  Q
    || ||||||||  |||| ||||||    
T  19514120 ttggttacaccttaaaatccttct 19514097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 19247839 - 19247745
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    |||||| |||||||| || ||||||| || |||| |||| |||||||||| ||||||||||||| | |||||| ||| ||  |||||||| ||||    
T  19247839 ttaatcctggttgcatcctaaaatgataaaattacccttccataaaattttattttcaaaaagcatcttccttttttcttgattacaccctaaaa 19247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 24527723 - 24527597
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| |  ||||||  |||||| || |||||  |||||||| ||| |||| | ||||||||||||| ||||| ||||||| | |||||||    
T  24527723 ttagagtttttctaatcacaccctgtttaatcctgattgcattccaaaatgccaaaattaccatttcataaaatttaatttt-aaaaagcatcttccttc 24527625  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
      || | ||||||||||||||||| |||||    
T  24527624 --ttctcgttacaccccaaaacccctcttc 24527597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 32561263 - 32561389
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||| ||||||||||  |||||||||| |||| ||||  |||||| || |||||| |||| | | |||||| ||    
T  32561263 agagtttttctaattacaccatgattaatcctggttgcacctaaaaatgacaaaattacccttctataaaa-ttaattttcgaaaaacatcttccttttt 32561361  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    |||| ||||||||| |||| || |||||    
T  32561362 tttttgttacaccctaaaatccctcttc 32561389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 3874 - 4167
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3874 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 3973  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3974 ttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 4073  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4074 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 26015947 - 26015654
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26015947 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 26015848  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26015847 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtccat 26015748  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26015747 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 26015654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 46322126 - 46321834
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46322126 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 46322027  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46322026 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 46321927  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  46321926 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttgaatcgattgtgtttttcttgttatgggttctcagttctgat 46321834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 47066020 - 47065728
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47066020 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 47065921  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47065920 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 47065821  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47065820 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 47065728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 43247038 - 43246745
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43247038 agagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 43246939  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246938 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 43246839  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  43246838 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgat 43246745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 32542263 - 32541971
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32542263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 32542164  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  32542163 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttttcacgtccatt 32542064  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32542063 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 32541971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 46923875 - 46924169
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46923875 ttagagtttttctacttgcaccatagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 46923974  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46923975 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 46924074  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  46924075 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 46924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 34591675 - 34591968
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34591675 agagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttttt 34591774  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34591775 tttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 34591874  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  34591875 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctcaattctgat 34591968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 7900433 - 7900725
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7900433 gagtttttttacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 7900532  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7900533 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 7900632  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7900633 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 7900725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 40995184 - 40995479
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  40995184 ttagagtttttctacttgcaccctanttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattatcaaaaagcatattccttc 40995283  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995284 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 40995383  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40995384 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 40995479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 41 - 332
Target Start/End: Complemental strand, 21279150 - 21278859
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21279150 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttctt 21279051  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21279050 ttttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 21278951  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  21278950 tcatgatttcaaagaaaattcgaagcaaattaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctg 21278859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 40 - 334
Target Start/End: Original strand, 27324953 - 27325247
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27324953 tagagtttttctacttgcatcctagttaattatggttgcactccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattccttct 27325052  T
Q  140 tttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27325053 tttttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 27325152  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27325153 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 27325247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 8215998 - 8215706
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8215998 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 8215899  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8215898 tttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8215799  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8215798 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 8215706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 40705592 - 40705301
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||    
T  40705592 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattgccctttcataaaatttgattttcaaaaagcctattccttcatt 40705493  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40705492 ttg-gttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40705394  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  40705393 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttgtcttgttatgggttctcagttctgat 40705301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 42 - 332
Target Start/End: Complemental strand, 8203521 - 8203231
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8203521 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 8203422  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8203421 tttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8203322  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8203321 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctg 8203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 41 - 302
Target Start/End: Complemental strand, 38876135 - 38875874
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38876135 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 38876036  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38876035 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 38875936  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38875935 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 38875874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 42 - 332
Target Start/End: Original strand, 25876776 - 25877066
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  25876776 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagcatattccttcttt 25876875  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25876876 cttggttacaccccaaaacccctcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 25876975  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  25876976 catgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctg 25877066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 42 - 326
Target Start/End: Original strand, 7790903 - 7791188
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  7790903 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaatgcctattccttcttt 7791002  T
Q  142 ttta-gttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||  ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7791003 tttttgttacaccccaaaaatcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 7791102  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctca 326  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  7791103 tcatgatttcaaagcaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctca 7791188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 37 - 299
Target Start/End: Complemental strand, 38283676 - 38283414
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 136  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  38283676 tctttgagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattcct 38283577  T
Q  137 tcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 236  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283576 tctttcttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 38283477  T
Q  237 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283476 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 38283414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 42 - 332
Target Start/End: Complemental strand, 47779589 - 47779298
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  47779589 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 47779490  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  47779489 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatattttctcacgtccatt 47779390  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-atttttcttgttatgggttctcagttctg 332  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  47779389 tatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctcagttctg 47779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 40994893 - 40994601
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||  || |||||||||||||||||||||  ||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  40994893 gagtttttctacttaaactctagttaatcatggttgcaccataaaataacgagattatccttttataaaatttgattttcaaaaagtctattccttcttt 40994794  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40994793 tttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 40994694  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  40994693 catgatttccaagaaaattcgaagcaaaccaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctcagttctgat 40994601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 32662449 - 32662177
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  32662449 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagtctattccttctt 32662350  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||                     |||||||||||||||||||||||||||||||||||||||    
T  32662349 ttttggttacaccccaaaacccttcttccaaaaccataat---------------------tctgcgaagattttcaaaaccatactttctcacgtccat 32662271  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  32662270 tcatgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcaattgtgtttttcctgttatgggttctcagttctgat 32662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 35924228 - 35924317
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35924228 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 35924317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 42095854 - 42095782
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42095854 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 42095782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 35924318 - 35924397
Alignment:
Q  255 aaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  35924318 aaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattgcgtttttcttgttatgggttctcagttctgat 35924397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 43047169 - 43047094
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  43047169 ttagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaattt 43047094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 39074437 - 39074364
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  39074437 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaattt 39074364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 43775882 - 43776000
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || || |||| |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||| | |||||| ||    
T  43775882 agagtttttctaattacatcctatttaatcctggttgcaccccaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttt 43775981  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  43775982 tcttggttacaccctaaaa 43776000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 21874712 - 21874639
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  21874712 agagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattattctttcataaaattt 21874639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 24980854 - 24980972
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| ||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||| | |||||| ||    
T  24980854 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttt 24980953  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  24980954 tcttggttacaccctaaaa 24980972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 39597955 - 39597841
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||| ||||||||  | ||||||  |||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| | |||||| |    
T  39597955 tagaatttttctaaatacaccctgtttaatcctggttgcaccccaaaatgacaaaattatcctgtcataaaatttaattttcaaaaagcatcttcctttt 39597856  T
Q  140 tttttagttacaccc 154  Q
    || || |||||||||    
T  39597855 ttcttggttacaccc 39597841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 45870254 - 45870127
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||  |||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||| | |||||| ||    
T  45870254 agagtttttctaattacaccatgtttaattctggttgcacctcaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttt 45870155  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  45870154 tcttggttacaccctaaaatccctcttc 45870127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 40862382 - 40862476
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    |||||| || |||||||| |||||||||| |||||||||||||||||||| ||||||||||||| | |||||| ||| || ||||||||| ||||    
T  40862382 ttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 40862476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 10594081 - 10594201
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| ||||||||||||||||| |||  |||| |||| |||||||||| ||||| ||||||| | ||||||     
T  10594081 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaataacagaattaaccttccataaaatttaatttttaaaaagcatcttccttt 10594180  T
Q  139 ttttttagttacaccccaaaa 159  Q
    ||| || ||||||||| ||||    
T  10594181 tttcttggttacaccctaaaa 10594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 20492683 - 20492809
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||| || || ||||||  |||||| |||||||||||||||||||||| |||| |||| |||||||||| |||||| |||||| | |||||| ||    
T  20492683 agagtttttataattacaccctgattaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc-aaaagcatcttccttttt 20492781  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  20492782 tcttggttacaccctaaaatccctcttc 20492809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 19021089 - 19021023
Alignment:
Q  95 attatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacc 161  Q
    |||| |||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  19021089 attaccctttcataaaatttgattttcaaaaagtctcttccttattttttggttacaccccaaaacc 19021023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 48642094 - 48642172
Alignment:
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||||||||||||||||||||||  | ||||||| ||||  |||||||||||||||| ||||||||||||||| |||||    
T  48642094 gatttcaaagaaaattcgaagcatgtgaggttagtaagttgtgttcttcaatcgattatatttttcttgttattggttc 48642172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 12847258 - 12847146
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| ||||||||| ||||||||| || |||| |||| |||||||||| ||||||||||||| | || ||| |||    
T  12847258 gagtttttctaattacaccctgtttaatcctggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatctttctttttt 12847159  T
Q  142 tttagttacaccc 154  Q
     || |||||||||    
T  12847158 cttggttacaccc 12847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 36688820 - 36688694
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| | |||||| | ||||||||||| ||||||||| ||||||| || ||||||||||||| | |||||| ||    
T  36688820 agagtttttctaattacaccctctttaatccttgttgcatctcaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagcatcttccttttt 36688722  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  36688721 tcttggttacaccctaaaatccctcttc 36688694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 42436565 - 42436462
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    |||||| ||| ||||||||||||||||||||||| |||| ||||||||||  |||||||||||| | ||| || ||| || ||||||||| |||| || |    
T  42436565 ttaatcctggctgcaccccaaaatgacaagattacccttccataaaatttagttttcaaaaagcatcttcattttttcttggttacaccctaaaatccct 42436466  T
Q  165 cttc 168  Q
    ||||    
T  42436465 cttc 42436462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 29042142 - 29042269
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||| || |||| |  |||||| | |||||||| ||||||||||| ||||||||||||||||| || |||||||| |||| | ||| || |    
T  29042142 tagagtttttctaattacaccttgtttaatcctagttgcacctcaaaatgacaaaattatcctttcataaaa-ttaattttcaacaagcatcttcatttt 29042240  T
Q  140 tttttagttacaccccaaaacccttcttc 168  Q
    || || ||||||||| |||| || |||||    
T  29042241 ttcttggttacaccctaaaatccctcttc 29042269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 30173547 - 30173420
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttc-ataaaatttgattttcaaaaagcctattccttct 139  Q
    |||||||||||| ||  |||||| |||||| ||||||||   ||||||||||| |||| |||||| ||||||||| ||||||||||| | | |||||| |    
T  30173547 agagtttttctaattataccctatttaatcttggttgcatttcaaaatgacaaaatta-cctttctataaaatttaattttcaaaaaacatcttcctttt 30173449  T
Q  140 tttttagttacaccccaaaacccttcttc 168  Q
    ||||| ||||||||| |||| || |||||    
T  30173448 ttttttgttacaccctaaaatccctcttc 30173420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 19687096 - 19687135
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcacc 81  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19687096 gagtttttctacttgcaccctagttaatcatggttgcacc 19687135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 25765044 - 25765100
Alignment:
Q  243 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 299  Q
    ||||||||||||||||||||||||| || ||||||||| ||  ||||||||||||||    
T  25765044 atgatttcaaagaaaattcgaagcagataaggttagcatgttgtgttcttcaatcga 25765100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 7883763 - 7883634
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcacccc-aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 137  Q
    |||||||||||||| || || | |  |||||| |||||||||||| ||||||| || |||| |||||||||||| || ||||||||||||| | ||||||    
T  7883763 ttagagtttttctaattacatcatgtttaatcctggttgcacccccaaaatgaaaaaattaccctttcataaaa-ttaattttcaaaaagcatcttcctt 7883665  T
Q  138 cttttttagttacaccccaaaacccttcttc 168  Q
     ||| || | ||||||| |||| || |||||    
T  7883664 ttttcttgggtacaccctaaaatccctcttc 7883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 40305557 - 40305431
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || || |||  |||||  ||||||||||  |||||||||| |||| ||||||| ||||||| |||||||||| || | | |||| |||    
T  40305557 gagtttttctaattacatcctgtttaattctggttgcacctaaaaatgacaaaattaccctttcaaaaaatttaattttcaaaatgcatctgcctttttt 40305458  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  40305457 cttggttacaccctaaaatccctcttc 40305431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 44709980 - 44709894
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||| ||  |||||| |||||| |||||| | |  ||||||| || |||||||||| ||||||||| |||||||||||||    
T  44709980 gagtttttctaattataccctatttaatcctggttgtatcataaaatgataaaattatccttttataaaatttaattttcaaaaagc 44709894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 241680 - 241792
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||| |||||||| || ||||||  ||||||||| |||||||  ||||||| || |||| |||| |||||||||  ||||||||||||| | |||||| |    
T  241680 tagaatttttctaattacaccctgtttaatcatgcttgcaccttaaaatgataaaattacccttccataaaatta-attttcaaaaagcatcttcctttt 241778  T
Q  140 tttttagttacacc 153  Q
    || || ||||||||    
T  241779 ttcttggttacacc 241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 19473935 - 19474034
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| |  ||||||  |||||  || || ||| | |||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||    
T  19473935 ttagagtttttctaatcacaccctgtttaattttgattacactctaaaatgacaa-attatcctttcataaaatttaatttt-aaaaagtctattccttc 19474032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 46101804 - 46101921
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||| || || ||||||  |||||| || ||||||   |||||||||| |||||| ||  ||||||||| ||||||||||||| | |||||| |||    
T  46101804 gagtttttttaattacaccctgcttaatcctgattgcactttaaaatgacaaaattatctttctataaaatttaattttcaaaaagcatcttcctttttt 46101903  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  46101904 cttggttacaccctaaaa 46101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 47540332 - 47540417
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt-ttagttacaccccaaaacccttcttc 168  Q
    ||||||| || |||||| || |||||||||| ||||||||||||| | |||||| |||| || ||||||||| |||| || |||||    
T  47540332 aaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttcctttttttcttggttacaccctaaaatccctcttc 47540417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 47546889 - 47546974
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt-ttagttacaccccaaaacccttcttc 168  Q
    ||||||| || |||||| || |||||||||| ||||||||||||| | |||||| |||| || ||||||||| |||| || |||||    
T  47546889 aaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttcctttttttcttggttacaccctaaaatccctcttc 47546974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 9065698 - 9065990
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9065698 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 9065797  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9065798 tttggttacaccccaaaacccttcttccaaaaccataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 9065897  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9065898 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 9065990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 4156254 - 4155962
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4156254 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 4156155  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4156154 tttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 4156055  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  4156054 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctcagttctgat 4155962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 43293743 - 43293451
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43293743 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcctattccttcttt 43293644  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43293643 tttggttacaccccaaaacccttcttccaaaaccataattctccaacagatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43293544  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  43293543 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctcagttctgat 43293451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 40 - 334
Target Start/End: Original strand, 33280807 - 33281101
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33280807 tagagtttttctacttgcaccctagttaatcatggttgtaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 33280906  T
Q  140 tttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33280907 tttttggttacaccccaaaacccttcttccaaaaccataattttccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 33281006  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  33281007 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctcagttctgat 33281101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 19034807 - 19034514
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19034807 agagtttttctacttgcaccttagttaatcatggttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcttattccttctt 19034708  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19034707 ttttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctat 19034608  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19034607 ttatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttctgat 19034514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 24559067 - 24559360
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  24559067 agagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 24559166  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24559167 ttttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtccat 24559266  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24559267 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 24559360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 24600099 - 24600392
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  24600099 agagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctt 24600198  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24600199 ttttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtccat 24600298  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24600299 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 24600392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 37865874 - 37866167
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  37865874 agagtttttctacttgcactctaattaatcatgattgcaccccaaaatgacaaaattatcctttcataaaatttgattttcaaaaagcctatttcttctt 37865973  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37865974 ttttggttacaccccaaaaccattcttccaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctat 37866073  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  37866074 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgat 37866167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 13145966 - 13145675
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  13145966 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaaccttttccttcttt 13145867  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13145866 tttgattacaccccaaaacccttcttccaaaaccataattctcaaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccatt 13145767  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  13145766 catgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 13145675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 40 - 312
Target Start/End: Complemental strand, 31527665 - 31527393
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31527665 tagagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 31527566  T
Q  140 tttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31527565 tttttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttca 31527466  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttctt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31527465 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 31527393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 40 - 332
Target Start/End: Complemental strand, 43518379 - 43518086
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  43518379 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagagtaccctttcataaaatttgattttcaaaaagcatattccttct 43518280  T
Q  140 tttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    || || ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43518279 ttcttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 43518180  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-atttttcttgttatgggttctcagttctg 332  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  43518179 ttaatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctcagttctg 43518086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 25084848 - 25084928
Alignment:
Q  34 aaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25084848 aaattttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 25084928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 25142821 - 25142901
Alignment:
Q  34 aaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25142821 aaattttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 25142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 6470022 - 6469947
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6470022 ttagagtttttctacttgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 6469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 38760608 - 38760537
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38760608 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38760537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 8232540 - 8232669
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||| ||  |||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| | | ||||||     
T  8232540 ttagagtttttctaattacactctgcttaatcctggttgcaccccaaaatgataagattaccctttcataaaatttaattttcaaaaaacatcttccttt 8232639  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| |||||||||||| |||| || |||||    
T  8232640 tttcttagttacaccctaaaatccgtcttc 8232669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 19617809 - 19617736
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  19617809 agagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattaccctttcataaaattt 19617736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 40738889 - 40739018
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| ||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||| || ||||||     
T  40738889 ttagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttt 40738988  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| || ||||||||| |||| || |||||    
T  40738989 tttcttggttacaccctaaaatccctcttc 40739018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 36294180 - 36294301
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||||||||| |||||||||||||||| |||| |||| |||||||||| |||||||||| |||| |||||||||    
T  36294180 agagtttttctaattacaccatgtttaatcatggttacaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaggcctcttccttctt 36294279  T
Q  141 ttttagttacaccccaaaaccc 162  Q
      || | |||||||||||||||    
T  36294280 ccttggctacaccccaaaaccc 36294301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 29920290 - 29920362
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  29920290 gagtttttctactagcaccctagttaatcatggttgcacctcaaaataacaagattaccctttcataaaattt 29920362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 18864429 - 18864556
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| ||||||||||| |||||||||| |||| ||||||||||||||| ||||| |||||| || |||||| ||    
T  18864429 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttccttttt 18864528  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  18864529 tcttggttacaccctaaaatccctcttc 18864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 41882005 - 41881893
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||  |||||||||||||||||||||| |||| | || |||||||||| ||||||||||||| |||||||| |||    
T  41882005 gagtttttctaattacaccctgtttaattttggttgcaccccaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatattcctttttt 41881906  T
Q  142 tttagttacaccc 154  Q
     || |||||||||    
T  41881905 cttggttacaccc 41881893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 10666223 - 10666096
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||| || || ||||||  |||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||  | |||||| ||    
T  10666223 agagtttttataattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatcttccttttt 10666124  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  10666123 tcttggttacaccctaaaatccctcttc 10666096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 12189392 - 12189273
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||| ||||| ||||||||||||| || |||| |||| |||||||||| ||||||||||| ||| | |||||||    
T  12189392 agagtttttctaattacaccttgtttaatcctggttacaccccaaaatgataaaattacccttccataaaatttaattttcaaaaaacctctcccttctt 12189293  T
Q  141 ttttagttacaccccaaaac 160  Q
    | || |||||||||||||||    
T  12189292 tcttggttacaccccaaaac 12189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 43548668 - 43548582
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||| || ||||||  |||||| |||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||    
T  43548668 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagc 43548582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 42437460 - 42437343
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||| ||  |||||| |||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||| | ||| || |||    
T  42437460 gagtttttctaattacactctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcatttttt 42437361  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  42437360 cttggttacaccctaaaa 42437343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 31484649 - 31484761
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || || |||  |||||  |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  31484649 gagtttttctaattacagcctgtttaattctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 31484748  T
Q  142 tttagttacaccc 154  Q
     || |||||||||    
T  31484749 cttggttacaccc 31484761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 37340799 - 37340911
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||  || ||||| ||||||||||||  ||||||||| |||||||||| ||||||||||||| | |||||| ||    
T  37340799 agagtttttctaattacaccctgtttaattctgattgcatcccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttt 37340898  T
Q  141 ttttagttacacc 153  Q
    |||| ||||||||    
T  37340899 ttttggttacacc 37340911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 12189224 - 12189146
Alignment:
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||| ||| ||| | |||||||||| ||||||||    
T  12189224 gatttcaaagaaagttcgaagcaaatgaggttagcaagtggtgttcttcgatcaattatgtttttcttgtcatgggttc 12189146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 15272853 - 15272728
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || ||||||  |||||| |||||||||  ||||||| ||| ||||||||| |||||||||| ||||||||||||| | || ||| |||     
T  15272853 agtttttctaattacaccctgtttaatcctggttgcacttcaaaatgtcaaaattatccttccataaaatttaattttcaaaaagcatctttcttttttc 15272754  T
Q  143 ttagttacaccccaaaacccttcttc 168  Q
    || ||||||||| |||| || |||||    
T  15272753 ttggttacaccctaaaatccctcttc 15272728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 7338643 - 7338715
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 137  Q
    |||||| |||||||||||||||||||||| |||| | ||||||||||||| ||||||||||||| | ||||||    
T  7338643 ttaatcctggttgcaccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagcatcttcctt 7338715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 37274677 - 37274574
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    |||||| || ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | ||| || ||| || ||||||||| |||| || |    
T  37274677 ttaatcctgcttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatccct 37274578  T
Q  165 cttc 168  Q
    ||||    
T  37274577 cttc 37274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 4621169 - 4621255
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttaca 151  Q
    |||||| |||||||| || |||||||||| |||| ||||||||||||||| |||||||||||| || |||||| ||| || ||||||    
T  4621169 ttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttttttcttggttaca 4621255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 18978453 - 18978535
Alignment:
Q  45 tttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaag 127  Q
    |||||||| || ||||||  |||||| |||||||||||||||||||||  |||||||||  ||||||||| ||||||||||||    
T  18978453 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttctataaaatttaattttcaaaaag 18978535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 6245188 - 6245313
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || ||||||  |||||  ||||||||| | | |||||||| ||||  |||||||||||||| |||||||||||| || |||||| |||     
T  6245188 agtttttctaattacaccctgtttaattctggttgcactctagaatgacaaaattacactttcataaaatttaattttcaaaaagactcttccttttttc 6245287  T
Q  143 ttagttacaccccaaaacccttcttc 168  Q
    || ||||||||| |||| || |||||    
T  6245288 ttggttacaccctaaaatccctcttc 6245313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 18522184 - 18522245
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaa 126  Q
    |||||| ||||||||||| ||||| |||| ||||||||| |||||||||| |||||||||||    
T  18522184 ttaatcctggttgcaccctaaaataacaaaattatccttccataaaatttaattttcaaaaa 18522245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 13211051 - 13210948
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    |||||| ||||||||||  |||||||||| ||||   || |||||||||| ||||||||||||| | |||||| ||| || ||||||||| |||| || |    
T  13211051 ttaatcctggttgcaccttaaaatgacaaaattactgttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 13210952  T
Q  165 cttc 168  Q
    ||||    
T  13210951 cttc 13210948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 37105892 - 37105970
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccct 163  Q
    |||||||||| |||| ||||||||||||||| ||||||||||| | | |||||| |||||| ||||||||| ||| ||||    
T  37105892 aaaatgacaaaattaccctttcataaaatttaattttcaaaaaacgtcttcctt-tttttttgttacacccaaaatccct 37105970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 31498837 - 31498923
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||| || ||||||  |||||  | ||||||| | |||||||||| |||| |||| |||||||||| |||||||||||||    
T  31498837 gagtttttctaattacaccctgtttaattcttgttgcactctaaaatgacaaaattacccttccataaaatttaattttcaaaaagc 31498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 10552506 - 10552591
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||||||||| || || |||  |||||| |||||||| |  |||||||||| ||||| ||| |||||||||| |||||||||||||    
T  10552506 agtttttctaattacatcctgattaatcctggttgcatcttaaaatgacaaaattattcttccataaaatttaattttcaaaaagc 10552591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 35319810 - 35319759
Alignment:
Q  90 acaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||| ||||| ||||||||||||||||||||||||||  || ||||||||||    
T  35319810 acaaaattattctttcataaaatttgattttcaaaaaatctcttccttcttt 35319759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 27308709 - 27308761
Alignment:
Q  78 caccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 130  Q
    ||||| ||||||| || |||||| ||||||||||||| ||||||| |||||||    
T  27308709 caccctaaaatgataaaattatcttttcataaaatttaattttcagaaagcct 27308761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 1481811 - 1482103
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1481811 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 1481910  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1481911 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccatt 1482010  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1482011 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 1482103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 25853517 - 25853225
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25853517 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 25853418  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25853417 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccatt 25853318  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25853317 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 25853225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 37 - 334
Target Start/End: Original strand, 21657922 - 21658218
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21657922 tcttagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 21658021  T
Q  137 tcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 236  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21658022 tcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaactatactttctcacgt 21658121  T
Q  237 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  21658122 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 21658218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 45505871 - 45505578
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  45505871 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaattttcaaaaagcctattccttctt 45505772  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45505771 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtccat 45505672  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45505671 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 45505578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 1520176 - 1520468
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1520176 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 1520275  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1520276 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 1520375  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  1520376 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctcagttctgat 1520468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 44143360 - 44143652
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44143360 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 44143459  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44143460 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtccatt 44143559  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44143560 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 44143652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 2390774 - 2390480
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390774 ttagaatttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 2390675  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390674 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 2390575  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  2390574 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 2390480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 34202278 - 34202571
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34202278 agagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 34202377  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34202378 ttttggttacaccccaaaacccttcttcaaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatattttctcacgtccat 34202477  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34202478 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 34202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 42342967 - 42343259
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42342967 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattccttctt 42343066  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42343067 ttttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 42343166  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  42343167 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 42343259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 39697862 - 39697570
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39697862 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 39697763  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39697762 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39697663  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39697662 catgatttcaaagaaaattagaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 39697570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 40811857 - 40811566
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgaaaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 40811758  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811757 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatagattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40811658  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  40811657 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgggttctcagttctgat 40811566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 37094087 - 37094380
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37094087 agagtttttctacttgcactctagttaatcatggttgcataccaaaatgataagattatcttttcataaaatttgattttcaaaaagcctattccttctt 37094186  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37094187 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccat 37094286  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  37094287 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctcagttctgat 37094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 13196222 - 13195931
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13196222 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 13196123  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13196122 tgtggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctatt 13196023  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  13196022 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttgttatgagttctcagttctgat 13195931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 3178223 - 3178517
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  3178223 ttagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttc 3178322  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3178323 ttttttggttacaccccaaaacccttcttccaaagccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 3178422  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  3178423 attcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtgtttttcttgttat-ggttctcagttttgat 3178517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 54 - 328
Target Start/End: Original strand, 43577015 - 43577289
Alignment:
Q  54 ttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacacc 153  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43577015 ttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacc 43577114  T
Q  154 ccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577115 ccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaa 43577214  T
Q  254 gaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagt 328  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  43577215 gaaaattcgaagcaaatcaggttagcaagtgttgttcttgaatcgattgtgtttttcttgttatgggttctcagt 43577289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 41 - 332
Target Start/End: Original strand, 10638777 - 10639067
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  10638777 agagtttttctacctgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 10638876  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    | || ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  10638877 tcttggttacaccccaaacccct-cttccaaaaccataattctccaatcgatcgattctgttatgcgaagattttcaaaaccatactttctcacgtccat 10638975  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  10638976 tcatggttttaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttcttatgggttctcagttctg 10639067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 927063 - 927336
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  927063 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 927162  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    ||      |||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  927163 tt------acaccccaa--------------aaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 927242  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  927243 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 927336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 41 - 225
Target Start/End: Original strand, 15011818 - 15012002
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15011818 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 15011917  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccata 225  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15011918 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccata 15012002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 111 - 332
Target Start/End: Original strand, 874953 - 875161
Alignment:
Q  111 atttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaag 210  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||     
T  874953 atttgattttcaaaaagcctattccttatttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcaatcgatcgtgttctgcgaa- 875051  T
Q  211 attttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttc 310  Q
                ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  875052 ------------atactctctcacgtccattcacgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttc 875139  T
Q  311 ttgttatgggttctcagttctg 332  Q
    ||||||||||||||||||||||    
T  875140 ttgttatgggttctcagttctg 875161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 32551753 - 32551681
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32551753 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 35895492 - 35895563
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatt 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  35895492 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatt 35895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 38629494 - 38629368
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| |||||||| || ||||||| || |||||||||||||||||||| |||||||||||| || |||||| |||    
T  38629494 gagtttttctaattacaccctctttaatcctggttgcatcctaaaatgataaaattatcctttcataaaatttaattttcaaaaagactcttcctttttt 38629395  T
Q  142 tttagttacaccccaaaacccttcttc 168  Q
     || ||||||||| |||| || |||||    
T  38629394 cttggttacaccctaaaatccctcttc 38629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 4331969 - 4331840
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| |||||||| || |||||||||| |||| ||||||||||||||| |||||||||||| |  ||||||     
T  4331969 ttagagtttttctaattacaccctctttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagacacttccttt 4331870  T
Q  139 ttttttagttacaccccaaaacccttcttc 168  Q
    ||| || ||||||||| |||| || |||||    
T  4331869 tttcttggttacaccctaaaatccctcttc 4331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 26170968 - 26171062
Alignment:
Q  34 aaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||| |||||||||||||| || ||||||  |||||| ||||||||||||||||| |||| |||| |||| |||||||||| |||||||||||||    
T  26170968 aaattttagagtttttctaattacaccctgtttaatcttggttgcaccccaaaataacaaaattacccttccataaaatttaattttcaaaaagc 26171062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 27980999 - 27980924
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||| |||||||||||||  || |||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27980999 tctttgagtttttctact--catcctacttaatcatggttacaccccaaaatgacaagattatcctttcataaaattt 27980924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 28067529 - 28067454
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||| |||||||||||||  || |||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28067529 tctttgagtttttctact--catcctacttaatcatggttacaccccaaaatgacaagattatcctttcataaaattt 28067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 13480635 - 13480508
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || |||| |  |||||| || |||||||  |||||||||| |||| ||||||||||||||| ||||||||||||| | |||||| ||    
T  13480635 agagtttttctaattacaccatgtttaatcctgattgcaccttaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcattttccttttt 13480536  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  13480535 tcttggttacaccctaaaatccctcttc 13480508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 7722759 - 7722641
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||  |||||||||| |||||||| || |||| |||| |||||||||| |||| |||||||| | |||||| ||    
T  7722759 agagtttttctaattacaccctgtttaattctggttgcacctcaaaatgataaaattacccttccataaaatttaatttacaaaaagcatcttccttttt 7722660  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  7722659 tcttggttacaccctaaaa 7722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 44798809 - 44798933
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||| || || ||||||  |||||| ||||| |||  ||||||||||| ||||  |||||||||||||| | ||||||||||||| |||||| |||    
T  44798809 gagtttttttaattacaccctgtttaatcctggttacacttcaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcctt-ttt 44798907  T
Q  142 tttagttacaccccaaaacccttctt 167  Q
     |  ||||||||||||||||| ||||    
T  44798908 ctcggttacaccccaaaacccctctt 44798933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 45443640 - 45443516
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || |||| |  |||||| || || |||| |||||||| || |||| ||||||||||||||| ||||||||||||||| ||| || |||    
T  45443640 gagtttttctaattacaccatgtttaatcctgattacacctcaaaatgataaaattaccctttcataaaatttaattttcaaaaagcctcttcatt-ttt 45443542  T
Q  142 tttagttacaccccaaaacccttctt 167  Q
     |  ||||||||||||||||| ||||    
T  45443541 ctcggttacaccccaaaacccctctt 45443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 44456867 - 44456780
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    |||||||| || ||||||| || |||| ||||||||||||||| ||||||||||||| | |||||| ||| || ||||||||| ||||    
T  44456867 tggttgcatcctaaaatgataaaattaccctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 44456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 458695 - 458577
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||| ||  |||||| |||||||| || ||||||| || |||||| ||  ||||||||| ||||||||||||| | |||||| ||    
T  458695 agagtttttctaattacactctgtttaatcctggttgcatcctaaaatgataaaattatcattctataaaatttaattttcaaaaagcatcttccttttt 458596  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  458595 tcttggttacaccctaaaa 458577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 31569708 - 31569635
Alignment:
Q  78 caccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttaca 151  Q
    ||||| |||||||||| ||||||||| |||||||||| ||||||||||||| | |||||| ||| || ||||||    
T  31569708 caccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttaca 31569635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 5109256 - 5109181
Alignment:
Q  66 taatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||| ||||| ||| | |||||||||| ||||| ||| |||||||||| ||||||||||| ||| ||||||||||    
T  5109256 taatcctggttacactctaaaatgacaaaattattcttacataaaatttaattttcaaaaaacctcttccttcttt 5109181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 31640838 - 31640769
Alignment:
Q  95 attatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    ||||||||| ||  |||||| ||||||||||||||| ||||||| ||  | |||| ||||||||||||||    
T  31640838 attatccttccaataaatttaattttcaaaaagcctcttccttcattcatggttataccccaaaaccctt 31640769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 40659278 - 40659197
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    ||||||| || |||| ||||| ||||||||| ||||| |||||||||||||||||  || | |||||| |||||||||| |||||    
T  40659278 aaaatgaaaaaattacccttttataaaatttaatttt-aaaaagcctattccttc--ttctcgttacatcccaaaacccctcttc 40659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 37 - 334
Target Start/End: Complemental strand, 34565117 - 34564820
Alignment:
Q  37 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcct 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34565117 tcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcctattcct 34565018  T
Q  137 tcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 236  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34565017 tctttttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtattctgcgaagattttcaaaaccatactttctcacgt 34564918  T
Q  237 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  34564917 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttttgttatgggttctcagttctgat 34564820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 23357340 - 23357048
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  23357340 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttcttt 23357241  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23357240 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 23357141  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23357140 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 23357048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 26122610 - 26122317
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  26122610 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcatattccttctt 26122511  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26122510 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccataatttctcacgtccat 26122411  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26122410 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 26122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 26290865 - 26290570
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  26290865 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttc 26290766  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26290765 ttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtcc 26290666  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26290665 attcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctcagttctgat 26290570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 26304122 - 26303827
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  26304122 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttc 26304023  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26304022 ttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtcc 26303923  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26303922 attcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctcagttctgat 26303827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 45 - 334
Target Start/End: Original strand, 8376243 - 8376532
Alignment:
Q  45 tttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttttt 144  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  8376243 tttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctttttt 8376342  T
Q  145 agttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 244  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8376343 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 8376442  T
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  8376443 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgat 8376532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 26337477 - 26337182
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  26337477 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttc 26337378  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26337377 ttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtcc 26337278  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  26337277 attcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatggattctcagttctgat 26337182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 334
Target Start/End: Original strand, 35605334 - 35605629
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35605334 ttagagtttttctacttacaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 35605433  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  35605434 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgctctgcgaagattttcaaaaccatactttctcatgtcc 35605533  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  35605534 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctcagttctgat 35605629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 44 - 334
Target Start/End: Original strand, 39365248 - 39365537
Alignment:
Q  44 gtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39365248 gtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttt 39365347  T
Q  144 tagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattca 243  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39365348 tggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattca 39365447  T
Q  244 tgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||    
T  39365448 tgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaattgactgt-gttttcttgttatgggttctcagttctgat 39365537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 24822807 - 24822515
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24822807 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 24822708  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  24822707 tttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccataatttctcacgtccatt 24822608  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  24822607 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgat 24822515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 43664408 - 43664117
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43664408 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 43664309  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43664308 tttggttacaccccaaaacccttcttccaaaaccataattctccaattgat-gattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43664210  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43664209 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctcagttctgat 43664117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 42512159 - 42512451
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42512159 gagtttttctacttgcatcctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 42512258  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42512259 tttggttacaccccaaaacccctcttccaaaattataattctccaatcgatcgattgtgttctccgaagattttcaaaaccatactttctcacgtccatt 42512358  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42512359 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 42512451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 41 - 315
Target Start/End: Complemental strand, 3032982 - 3032708
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  3032982 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataacatttgattttcaaaaagcctatttcttctt 3032883  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3032882 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcat 3032783  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgtt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  3032782 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttccttgtt 3032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 41 - 299
Target Start/End: Original strand, 17122089 - 17122347
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17122089 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 17122188  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17122189 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 17122288  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17122289 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 17122347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 40 - 303
Target Start/End: Original strand, 8656552 - 8656815
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8656552 tagagtttttctacttgcaccctagttaatcatggttgcaaccaaaaatgacaagattaacctttcataaaatttgattttcaaaaagtctattccttct 8656651  T
Q  140 tttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 239  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8656652 tttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 8656751  T
Q  240 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8656752 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt 8656815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 42 - 315
Target Start/End: Original strand, 5988188 - 5988461
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  5988188 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 5988287  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
     || |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5988288 cttggttacatcccaaaacccctcttccaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 5988387  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgtt 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  5988388 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgtt 5988461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 43 - 295
Target Start/End: Original strand, 34917539 - 34917791
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  34917539 agtttttctacttgcaccctagttaatcatggatgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctttt 34917638  T
Q  143 ttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 242  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34917639 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 34917738  T
Q  243 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaa 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34917739 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaa 34917791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 41 - 315
Target Start/End: Complemental strand, 3137309 - 3137035
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  3137309 agagtttttctacttgcaccgtagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 3137210  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    | || ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137209 tcttggttacaccccaaaacccctcttcgaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 3137110  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgtt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  3137109 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtcttgttcttcaatcgattgtgttttccttgtt 3137035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 41 - 264
Target Start/End: Complemental strand, 22439690 - 22439467
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22439690 agagtttttctacttgcatcctagttaatcatggttacacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 22439591  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22439590 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 22439491  T
Q  241 tcatgatttcaaagaaaattcgaa 264  Q
    ||||||||||||||||||||||||    
T  22439490 tcatgatttcaaagaaaattcgaa 22439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 28909659 - 28909734
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28909659 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 28909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 12713663 - 12713578
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||||    
T  12713663 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacctttttataaaatttgattttcaaa 12713578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 28885796 - 28885723
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28885796 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 28885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 15839455 - 15839527
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15839455 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 15839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 11587897 - 11587970
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11587897 agagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 11587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 8014008 - 8013936
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  8014008 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 8013936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 37577983 - 37578055
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  37577983 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 37578055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 17601332 - 17601406
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17601332 tagagtttttctaattgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 17601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 5599945 - 5599872
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  5599945 agagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaattt 5599872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 5640675 - 5640748
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  5640675 agagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaattt 5640748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 31793933 - 31793821
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||||||  |||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  31793933 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 31793834  T
Q  142 tttagttacaccc 154  Q
     || |||||||||    
T  31793833 cttggttacaccc 31793821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 41942446 - 41942319
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| |||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||| | || ||| ||    
T  41942446 agagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttacttttt 41942347  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| |||| || |||||    
T  41942346 tcttggttacaccctaaaatccctcttc 41942319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 36057817 - 36057699
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||  |||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||| | |||||| ||    
T  36057817 agagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttt 36057718  T
Q  141 ttttagttacaccccaaaa 159  Q
    | || ||||||||| ||||    
T  36057717 tcttggttacaccctaaaa 36057699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 12722559 - 12722682
Alignment:
Q  45 tttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttttt 144  Q
    |||||||| || ||||||  |||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | ||| || ||| ||    
T  12722559 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcattttttctt 12722658  T
Q  145 agttacaccccaaaacccttcttc 168  Q
     ||||||||| |||| || |||||    
T  12722659 ggttacaccctaaaatccctcttc 12722682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 2828232 - 2828154
Alignment:
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||||||||||||||||||||||||| |||||| |||||  |||||||| ||||||||| |||||||||| ||||||||    
T  2828232 gatttcaaagaaaattcgaagcaaataaggttaacaagttgtgttcttcgatcgattgtgtttttcttgtcatgggttc 2828154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 42688025 - 42687908
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||| || ||| ||  |||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||| ||||||| | |||||| |||    
T  42688025 gagtttttctaattacactctgtttaatcttggttgcaccccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttcctttttt 42687926  T
Q  142 tttagttacaccccaaaa 159  Q
     || ||||||||| ||||    
T  42687925 cttggttacaccctaaaa 42687908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 38234411 - 38234503
Alignment:
Q  36 atcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||||||||| || ||||||| |||||| || ||||||  ||||||||||| || |||||| |||||||||| ||||| |||||||    
T  38234411 atcttagagtttttctaattacaccctatttaatcctgtttgcacttcaaaatgacaaaatgatccttccataaaatttaatttttaaaaagc 38234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 38460187 - 38460060
Alignment:
Q  40 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 139  Q
    ||||||||||||| || ||||||  |||||| |||||||||| ||||||||||| |||| ||||  |||||| || |||||| |||||| | |||||| |    
T  38460187 tagagtttttctaattacaccctgattaatcctggttgcacctcaaaatgacaaaattacccttctataaaa-ttaattttcgaaaagcatcttcctttt 38460089  T
Q  140 tttttagttacaccccaaaacccttcttc 168  Q
    ||||| ||||||||| |||| || |||||    
T  38460088 ttttttgttacaccctaaaatccctcttc 38460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 38168539 - 38168452
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    ||||||||| ||||||||| || |||| |||| |||||||||| ||||||||||||| |||||||| ||| || ||||||||| ||||    
T  38168539 tggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatattccttttttcttggttacaccctaaaa 38168452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 38945711 - 38945774
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||||| ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||    
T  38945711 ttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagc 38945774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 35329818 - 35329725
Alignment:
Q  34 aaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||||| |||||||||||| || |||| |  |||||| ||||||||| |||||||||||| ||||||||| ||||||| || |||||||||||||    
T  35329818 aaatctaagagtttttctaattacaccatgtttaatcctggttgcactccaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagc 35329725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 5347560 - 5347437
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || || |||  |||||| ||||| ||||  ||||||| || |||| ||||||||||||||| | ||||||||||||| |||||| |||     
T  5347560 agtttttctaattacatcctgtttaatcctggttacaccttaaaatgataaaattaccctttcataaaatttaagtttcaaaaagcctcttcctt-ttta 5347462  T
Q  143 ttagttacaccccaaaacccttctt 167  Q
    |  ||||||||||||||||| ||||    
T  5347461 tcggttacaccccaaaacccctctt 5347437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 4005764 - 4005891
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| |||||| | |  |||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| ||    
T  4005764 agagtttttctaattacaccctgtttaatcctggttgtatcttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttt 4005863  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || |||| |||| |||| || |||||    
T  4005864 tcttggttataccctaaaatccctcttc 4005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 11266156 - 11266259
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccctt 164  Q
    |||||| |||||||||| |||||||| |||||||  |||  ||||||||| ||||||||||||| | |||||| ||| || ||||||||| |||| || |    
T  11266156 ttaatcctggttgcacctcaaaatgataagattactcttctataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 11266255  T
Q  165 cttc 168  Q
    ||||    
T  11266256 cttc 11266259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 7970081 - 7969992
Alignment:
Q  78 caccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    ||||| |||||||||| |||| | ||||||||||||| ||||| |||||| || |||||||||| || |||||||| |||||||| |||||    
T  7970081 caccctaaaatgacaaaattaccttttcataaaattt-atttttaaaaagtcttttccttctttcttggttacacctcaaaacccctcttc 7969992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 4229637 - 4229753
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || || |||  |||||| ||||||||   ||||||||||  ||||||||| |||||||||| ||||||||||| | | |||||| |||     
T  4229637 agtttttctaattacatcctgtttaatcctggttgcatttcaaaatgacagaattatccttccataaaatttaattttcaaaaaacatcttccttttttc 4229736  T
Q  143 ttagttacaccccaaaa 159  Q
    || ||||||||| ||||    
T  4229737 ttggttacaccctaaaa 4229753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 7969938 - 7969866
Alignment:
Q  245 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttat 317  Q
    ||||||||||||||||||||| | || ||||||| ||||  |||||||||||||||| | ||||||| |||||    
T  7969938 gatttcaaagaaaattcgaaggagatgaggttagtaagttgtgttcttcaatcgattatgtttttctagttat 7969866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 28620483 - 28620416
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataa 109  Q
    ||||||||||| || ||||||| |||||| || ||||||||||||||||||  ||||||||| |||||    
T  28620483 gagtttttctaattacaccctatttaatcttgattgcaccccaaaatgacagaattatccttccataa 28620416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 5552 - 5621
Alignment:
Q  84 aaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacacc 153  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||  | |||||| ||| || ||||||||    
T  5552 aaaatgacaaaattatccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacacc 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 39712700 - 39712774
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||| ||||| || || ||||||| || |||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  39712700 ttaatcctggttacatcctaaaatgataaaattatcttttcataaaatttaatttt-aaaaagcctcttccttctt 39712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 16571303 - 16571214
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccc 162  Q
    ||||| || ||||||||||||| | || ||||||||||| ||| ||||| |||||||   |||||||||| || ||||||||| |||||||    
T  16571303 tggtttcaacccaaaatgacaaaactaccctttcataaagttt-atttttaaaaagctgtttccttctttcttggttacacccgaaaaccc 16571214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 13861 - 14155
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13861 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 13960  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13961 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 14060  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttc-aatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  14061 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaaatcgattgtgtttttcttgttatgggttctcagttctgat 14155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 7141263 - 7141555
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7141263 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 7141362  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7141363 tttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 7141462  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  7141463 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttttgttatgggttctcagttctgat 7141555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 41 - 334
Target Start/End: Original strand, 6625357 - 6625650
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6625357 agagtttttctacttacaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 6625456  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6625457 ttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcat 6625556  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  6625557 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatagattgtgtttttcttgttatgggttctcagttctgat 6625650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 42 - 334
Target Start/End: Original strand, 18893675 - 18893967
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18893675 gagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttcttt 18893774  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18893775 tttggttacaccccaaaacccttcttccagaaccataattctccaaccgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 18893874  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18893875 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 18893967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 6168020 - 6167728
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6168020 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttcttt 6167921  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6167920 tttggttacaccccaaaacccttcttccaaatccataattctccaatcgatcgattgtgttctgcgaagattttcaaacccatactttctcacgtccatt 6167821  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | ||||||||||||||||    
T  6167820 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtggtcggttctcagttctgat 6167728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 29122441 - 29122146
Alignment:
Q  41 agagtttttctacttgcac--cctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29122441 agagtttttctacttgcacaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 29122342  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29122341 ttttttggttacacctcaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtcc 29122242  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  29122241 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgat 29122146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 39 - 332
Target Start/End: Complemental strand, 29630583 - 29630291
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  29630583 ttagagtttttttacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttc 29630484  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    ||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29630483 tttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 29630384  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctg 332  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  29630383 attcatgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgt-gttttcttcttatgggttctcagttctg 29630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 28 - 332
Target Start/End: Original strand, 3094574 - 3094878
Alignment:
Q  28 tgctaaaaatcttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaag 127  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  3094574 tgctagaaatattagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaag 3094673  T
Q  128 cctattccttcttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatact 227  Q
    | |||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3094674 catattccttctttcttggttacaccccaaaacctctcttccaaaaccataattctccaatcgatcgattatgttctgcgaagattttcaaaaccatact 3094773  T
Q  228 ttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcag 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  3094774 ttctcacgtccattcatgatttcaaataaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcag 3094873  T
Q  328 ttctg 332  Q
    |||||    
T  3094874 ttctg 3094878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 25335222 - 25335003
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25335222 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcttattccttcttt 25335123  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25335122 ttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 25335023  T
Q  242 catgatttcaaagaaaattc 261  Q
    ||||||||||||||||||||    
T  25335022 catgatttcaaagaaaattc 25335003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 41 - 236
Target Start/End: Complemental strand, 13890043 - 13889848
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13890043 agagtttttctacttgcaccctaattaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 13889944  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 236  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13889943 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgt 13889848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 7081002 - 7081098
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    ||||| ||||||||||||| || |||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| || |||||    
T  7081002 tggttacaccccaaaatgataaaattatccttagataaaatttgattttcaaaaagcctcttccttcttttttggttacactccaaaatccctcttc 7081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 8811357 - 8811261
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    ||||| ||||||||||||| || ||||||||| |||||||||||||||| ||||||| | |||||| ||| || ||||||| |||||||||||||||    
T  8811357 tggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 8811261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 6925776 - 6925903
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||| || ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | |||||| ||    
T  6925776 agagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttt 6925875  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || |||||| || |||| || |||||    
T  6925876 tcttggttacatcctaaaatccctcttc 6925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 23350351 - 23350466
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| |||||||||||||||||||  | ||||||||| |||||||||| ||||||||||||| | ||||||     
T  23350351 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgatcaaattatccttccataaaatttaattttcaaaaagcatcttccttt 23350450  T
Q  139 ttttttagttacaccc 154  Q
    ||| ||  ||||||||    
T  23350451 tttcttgtttacaccc 23350466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 34085904 - 34085811
Alignment:
Q  66 taatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaa 159  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||||| ||| || |||| |||| ||||    
T  34085904 taatcctggttgcaccccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttataccctaaaa 34085811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 13889849 - 13889802
Alignment:
Q  287 gttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13889849 gttcttcaatcgattgtgtttttcttgttatgggttctcagttctgat 13889802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 11369167 - 11369053
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||| || ||||||  |||||| |||||||||| ||||||||||| ||||  |||  ||||||||| ||||||||||||  | ||||||     
T  11369167 ttagagtttttctaattacaccctgtttaatcttggttgcacctcaaaatgacaaaattactcttctataaaatttaattttcaaaaagaatcttccttt 11369068  T
Q  139 ttttttagttacacc 153  Q
    ||| || ||||||||    
T  11369067 tttcttggttacacc 11369053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 7081155 - 7081232
Alignment:
Q  246 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||||||||||| |||||||||||| |||||| |||||  | |||||||||| ||| | |||||||||||||||||||    
T  7081155 atttcaaagaaatttcgaagcaaataaggttaacaagttgtattcttcaatcaattatgtttttcttgttatgggttc 7081232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 8811204 - 8811127
Alignment:
Q  246 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||||||||||| ||| |||||||| ||||||||||||  | |||||||||| ||| | |||||||||||||||||||    
T  8811204 atttcaaagaaatttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgggttc 8811127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 31091230 - 31091150
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttc 121  Q
    |||||||||||| || |||| |  |||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||    
T  31091230 agagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc 31091150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 18024378 - 18024505
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||| || ||||||  |||||  ||||| ||  | |||||||||| |||  ||||||||||||| | ||||| ||||||| | |||||||||    
T  18024378 agagtttttctaattacaccctgtttaattctggttacattctaaaatgacaaaattgccctttcataaaatctaattttgaaaaagcttcttccttctt 18024477  T
Q  141 ttttagttacaccccaaaacccttcttc 168  Q
    | || ||||||||| ||||||| |||||    
T  18024478 tcttggttacacccgaaaacccctcttc 18024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 32173794 - 32173670
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttca-aaaagcctattccttcttt 141  Q
    |||||||||| || ||||||  |||||  ||||| || ||||||||||||| |||| | ||| ||||||||| ||||||| |||||||| |||||| |||    
T  32173794 agtttttctaattacaccctgtttaattctggttacatcccaaaatgacaaaattaccattttataaaatttaattttcaaaaaagcctcttcctt-ttt 32173696  T
Q  142 tttagttacaccccaaaacccttctt 167  Q
     |  ||||||||||||||||| ||||    
T  32173695 ctcggttacaccccaaaacccctctt 32173670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 5714907 - 5715003
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    |||||||||  |||||| |||| |||| ||||||||||||||| ||||||||||||| | ||| || | |||| ||||||||| |||| || |||||    
T  5714907 tggttgcacttcaaaataacaaaattaccctttcataaaatttaattttcaaaaagcatcttcattttcttttggttacaccctaaaatccctcttc 5715003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 29623233 - 29623170
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    |||||| ||||||||||  |||||||||| |||||| || |||||||||| |||||||||||||    
T  29623233 ttaatcctggttgcaccttaaaatgacaaaattatctttccataaaatttaattttcaaaaagc 29623170  T

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Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 8525525 - 8525611
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 128  Q
    ||||||||||| || ||| ||  |||||  |||||||| |||||||||| || |||| |||| |||||||||| |||||||||||||    
T  8525525 gagtttttctaattacacactgtttaattctggttgcatcccaaaatgataaaattacccttccataaaatttaattttcaaaaagc 8525611  T

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Target: scaffold0438 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 39 - 334
Target Start/End: Complemental strand, 2202 - 1907
Alignment:
Q  39 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2202 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttc 2103  T
Q  139 ttttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 238  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2102 ttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtcc 2003  T
Q  239 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2002 attcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctcagttctgat 1907  T

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Target: scaffold0276 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 41 - 334
Target Start/End: Complemental strand, 14134 - 13842
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14134 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaattataagattatcctttcataaaatttgattttcaaaaagcctattccttctt 14035  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14034 ttttggttacaccccaaaaccctttttccaaaacgataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccat 13935  T
Q  241 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttctgat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13934 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt-ttgttatgggttctcagttctgat 13842  T

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Target: scaffold0276; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 42 - 292
Target Start/End: Original strand, 12520 - 12770
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12520 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 12619  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12620 tttggttacaccccaaaacccttcttccaaaaccataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccatt 12719  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttctt 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12720 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttctt 12770  T

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Target: scaffold0007 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 42 - 331
Target Start/End: Complemental strand, 157199 - 156911
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 141  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  157199 gagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 157100  T
Q  142 tttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 241  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  157099 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 157000  T
Q  242 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttctcagttct 331  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  156999 catgattttcaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg-cgttttcttgttatgggttctcagttct 156911  T

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Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 200056 - 200117
Alignment:
Q  65 ttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaa 126  Q
    |||||| ||| |||| ||||||||||||| |||| |||| |||||||||| |||||||||||    
T  200056 ttaatcctggatgcatcccaaaatgacaaaattacccttccataaaatttaattttcaaaaa 200117  T

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Target: scaffold0248 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 41 - 241
Target Start/End: Complemental strand, 3109 - 2909
Alignment:
Q  41 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||| |||    
T  3109 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagcatattcctcctt 3010  T
Q  141 ttttagttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 240  Q
    |  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3009 tcatggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 2910  T
Q  241 t 241  Q
    |    
T  2909 t 2909  T

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Target: scaffold0065 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 38496 - 38424
Alignment:
Q  42 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  38496 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 38424  T

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Target: scaffold0896 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 3804 - 3708
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    ||||| ||||||||||||| || ||||||||| |||||||||||||||| ||||||| | |||||| ||| || ||||||| |||||||||||||||    
T  3804 tggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 3708  T

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Target: scaffold0896; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 3651 - 3575
Alignment:
Q  246 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtatttttcttgttatgggttc 323  Q
    |||||||||||  ||| |||||||| ||||||||||||  | |||||||||| ||| | |||||||||||||||||||    
T  3651 atttcaaagaat-ttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgggttc 3575  T

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Target: scaffold0578 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 8719 - 8842
Alignment:
Q  43 agtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttt 142  Q
    |||||||||| || ||||||  |||||| |||||||| |  ||||| |||| ||||  ||| |||||||||| ||||||||||||| | |||||| |||     
T  8719 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttccttttttc 8818  T
Q  143 ttagttacaccccaaaacccttct 166  Q
    || ||||||||  |||| ||||||    
T  8819 ttggttacaccttaaaatccttct 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 365905 - 365809
Alignment:
Q  72 tggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaacccttcttc 168  Q
    |||||||||| ||| ||||||| || | | || |||||||||| ||||||||||||| | |||||| ||| || ||||||||| |||| || |||||    
T  365905 tggttgcacctcaacatgacaaaatgacctttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 13535 - 13612
Alignment:
Q  85 aaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttttttagttacaccccaaaaccc 162  Q
    |||||| || ||||||||| |||||||| |  |||||||||||||| ||| |||||| || |||||  ||||||||||    
T  13535 aaatgagaaaattatccttccataaaatatagttttcaaaaagcctcttcattctttcttggttaccacccaaaaccc 13612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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