View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4562_high_19 (Length: 213)
Name: NF4562_high_19
Description: NF4562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4562_high_19 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 43068472 - 43068684
Alignment:
| Q |
1 |
cacatagaggcaaaagtaacagcgagtatatatacctttcctcaattctatctcgtagagcagacgggcaaataaccaacgcagccatgggaagaagtaa |
100 |
Q |
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| T |
43068472 |
cacatagaggcaaaagtaacagcgagtatatatacctttcctcaattctatctcgtagagcagacgggcaaataaccaacgcagccatgggaagaagtaa |
43068571 |
T |
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| Q |
101 |
aaccctaattcccttctcattttttcattcatatctctatttctttcgtttttataatttaagtttctgatgaatccatgaattcttatttcatttttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43068572 |
aaccctaattcccttctcattttttcattcatatctctgtttctttcgtttttataatttaagtttctgatgaatccatgaattcttatttcatttttaa |
43068671 |
T |
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| Q |
201 |
agagatgtgatga |
213 |
Q |
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||||||||||||| |
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| T |
43068672 |
agagatgtgatga |
43068684 |
T |
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