View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4563_high_3 (Length: 377)
Name: NF4563_high_3
Description: NF4563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4563_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 40783039 - 40783401
Alignment:
| Q |
1 |
ctgcaatctgattatcactataaatagtattagaaacagttgtatcaatcacaccagttgttacattaacttgatttccagaagtagtaacattaagagg |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783039 |
ctgcaagctgattatcactataaatagtattagaaacagttgtatcaatcacaccagttgttacattaacttgatttccagaagtagtaacattaagagg |
40783138 |
T |
|
| Q |
101 |
atactctccatcatcactgtttccagcttgtgtgtgtagagggttacttgcagtttgaaactgtgatattgtgtaaagtgttggtagaatatgaaactgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783139 |
atactctccatcatcactgtttccagcttgtgtgtgtagagggttacttgcagtttgaaactgtgatattgtgtaaagtgttggtagaatatgaaactgt |
40783238 |
T |
|
| Q |
201 |
agaagttgaagttggttttgtgtgctgattgagtttagtgttcctgattttagactcgagaaggcattatctgttggtgcaaaaattgttaggccttgat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783239 |
agaagttgaagttggttttgtgtgctgattgagtttagtgttcctgattttagactcgagaaggcattatctgttggtgcaaaaattgttaggccttgat |
40783338 |
T |
|
| Q |
301 |
ttgagttgttgagttgtgagttgattcggtcggatacttgtgttgcttttagtagcttgatga |
363 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783339 |
ttgagttgttgagttgtgagttgattcggtcggatacttgtgttgcttttagtagcttgatga |
40783401 |
T |
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