View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4565-Insertion-10 (Length: 386)
Name: NF4565-Insertion-10
Description: NF4565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4565-Insertion-10 |
 | |
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| [»] chr6 (14 HSPs) |
| |
|
| [»] scaffold0133 (2 HSPs) |
| | |
|
| [»] scaffold0144 (1 HSPs) |
| | |
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| [»] scaffold0511 (1 HSPs) |
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| [»] scaffold0256 (1 HSPs) |
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| [»] scaffold0230 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 5 - 386
Target Start/End: Original strand, 16987822 - 16988203
Alignment:
| Q |
5 |
acactttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcat |
104 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
16987822 |
acactttcatcattgaagaccatttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagagagtttttcactgtcactagcat |
16987921 |
T |
|
| Q |
105 |
gtcttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcc |
204 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| | |||| ||||||||||||||||||||||||| |
|
|
| T |
16987922 |
gtcttagaagaaactctacaatctgttctttatctttgtctcttccatatactttcggttctgtgatagtagaaatagtttggcgccattcatcatctcc |
16988021 |
T |
|
| Q |
205 |
tcgttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttc |
304 |
Q |
| |
|
|||||| |||||||| ||| ||||||||||||||||||||| | | ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16988022 |
tcgttgatgctcctccatgactcccacttgttgaaatccaaacttgatcctttcttcagcaatatcatcaatctttttagcaactttcttcatcctcttc |
16988121 |
T |
|
| Q |
305 |
ccaatattacgacgagccaaaatcttcataggatggaaacaagtgttgtctccatgtgcttttgaggttattgagcattcat |
386 |
Q |
| |
|
||||| || ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
16988122 |
ccaatgttgcgatgagccaaaatcttcataggatggaaactagtgttgtctccatgtgcttttgaggttattgagcattcat |
16988203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 8 - 386
Target Start/End: Original strand, 16658380 - 16658764
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||||| || ||||||| |||| ||||||||| | ||| || |||||||||||| |||||| |||||||||||| || ||||||| |
|
|
| T |
16658380 |
ctttcatcattgaagaccatttgagcgagtgttgtttttccttgtccgccaacaccaacaatggaacagacagagagttcttcactgtcgctagcat--- |
16658476 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
16658477 |
ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcg |
16658576 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
||| ||||||||||||| |||||| ||||||||||||| | | ||||||||| ||||||| |||||||| |||||||||| |||||||||||||| ||| |
|
|
| T |
16658577 |
ttgctgctcctctgtgactcccaccagttgaaatccaaacttgatcctttcttcagcaatatcatcaatccttttagcaacctccttcatcctctttcca |
16658676 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaacaag---------tgttgtctccatgtgcttttgaggttattgagcattcat |
386 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| |||| || ||||| |||||||||||||||| |||||||| ||||||| |
|
|
| T |
16658677 |
atgttacgacgagccaaaatcttcataggatgaaaactagtgatgcacttgttgcctccatgtgcttttgaagttattgaacattcat |
16658764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 349
Target Start/End: Complemental strand, 16867795 - 16867457
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||||| || |||||| |||| ||||||||| | ||| || |||||||||||| |||||| |||||||||||| || ||||||| |
|
|
| T |
16867795 |
ctttcatcattgaagaccacttgagcgagtgttgtttttccttgtccgccaacaccaacaatggaacagacagagagttcttcactgtcgctagcat--- |
16867699 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || | |||| |||||||||||||||||||||||||||| |
|
|
| T |
16867698 |
ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtaacaatagaaatagtttggcgccattcatcatctcctcg |
16867599 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||| | | ||||||||| ||||||| |||||||| |||||||||| |||||||||||||| ||| |
|
|
| T |
16867598 |
ttggtgctcctctgtgactcccactagttgaaatccaaacttgatcctttcttcagcaatatcatcaatccttttagcaacctccttcatcctctttcca |
16867499 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaacaagtg |
349 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16867498 |
atgttgcgacgagccaaaatcttcataggatggaaactagtg |
16867457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 62 - 344
Target Start/End: Original strand, 16838103 - 16838385
Alignment:
| Q |
62 |
ccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcg |
161 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | ||||||||| | || ||||||||||||||||| |||||||||||||||||||||||||| ||| | |
|
|
| T |
16838103 |
ccaacaatggaatagacagagagttcttcactgttactagcatgccctataagaaactctacaatctgctctttatctttgtctcttccatatacttttg |
16838202 |
T |
|
| Q |
162 |
gttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttcttt |
261 |
Q |
| |
|
|||| |||| |||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| | |||||||||| |
|
|
| T |
16838203 |
gttcggtgacagcagaagtagttaggatccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttc |
16838302 |
T |
|
| Q |
262 |
agcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
||||||| |||||||| |||||||||| |||||||||||||| ||||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
16838303 |
agcaatatcatcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaac |
16838385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 344
Target Start/End: Original strand, 17069877 - 17070210
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||| | || ||||||| |||| ||||||||| | ||| || ||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
17069877 |
ctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacaccaacaatggaatagacagagagttcttcactgtcactagcat--- |
17069973 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| | ||||||||||||||| |
|
|
| T |
17069974 |
ttagaagaaactctacaatctgctctttatctttgtctcttccatatactttcggttcggtgatagcagaaatagtttggatctgttcatcatctcctcg |
17070073 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
|||||||||||| |||| |||||| ||||||||||| | ||| ||||||||||||||||| | |||||| |||||||||| |||||||||||||| ||| |
|
|
| T |
17070074 |
ttggtgctcctccgtgactcccaccggttgaaatccatactcgatcctttctttagcaatatcgtcaatccttttagcaacctccttcatcctctttcca |
17070173 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
|| || ||| |||||||||||||||| |||||||||| |
|
|
| T |
17070174 |
atgttgcgatgagccaaaatcttcattggatggaaac |
17070210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 62 - 344
Target Start/End: Original strand, 16797591 - 16797873
Alignment:
| Q |
62 |
ccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcg |
161 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||| | |
|
|
| T |
16797591 |
ccaacaatggaatagacagagagttcttcactggtactagcatgccctagaagaaactctacaatctgttctttatctttgtctcttccatatacttttg |
16797690 |
T |
|
| Q |
162 |
gttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttcttt |
261 |
Q |
| |
|
|||| |||| |||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| | |||||||||| |
|
|
| T |
16797691 |
gttcggtgacagcagaagtagttaggatccattcatcatctcctcgttggtgctcctccgtgactcccactgattgaaatccaaactttttcctttcttc |
16797790 |
T |
|
| Q |
262 |
agcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
||||||| |||||||| |||||||||| |||||||||||||| ||||| || |||||||||||||| ||||| ||||| |||| |
|
|
| T |
16797791 |
agcaatatcatcaatccttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaattttcattggatgaaaac |
16797873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 344
Target Start/End: Complemental strand, 18872974 - 18872641
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||||| | ||||| ||||||||||||||||||| |||||||||||| || |||||| | |
|
|
| T |
18872974 |
ctttcatcattgaagaccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcactatcgacagcatgac |
18872875 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||| |||| | |||| | || ||||||||||||| |||||||||||||| | ||||| |||||||||||||| |||||||||||| |
|
|
| T |
18872874 |
ttagaagaaactcaacaacttgctctctgtcacgatctcttccatatactttcggttcagtgatgacagaaaaagtttggcgccatttatcatctcctcg |
18872775 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
|||| | ||||| ||| | || ||||| |||||||| | | ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
18872774 |
ttggcgatcctccatgactaccgcttgt---aatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttcca |
18872678 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| |
|
|
| T |
18872677 |
atatcccgacgagccaaaatcttcttaggatggaaac |
18872641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 8 - 344
Target Start/End: Complemental strand, 18805980 - 18805647
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||||| | ||||| ||||||||||||||||||| |||||||||||| || |||||| | |
|
|
| T |
18805980 |
ctttcatcattgaataccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcactatcgacagcatgac |
18805881 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||| |||| | |||| | || ||||||||||||| |||||||||||||| | | ||| ||||||||||||||| |||||||||||| |
|
|
| T |
18805880 |
ttagaagaaactcaacaacttgctctctgtcacgatctcttccatatactttcggttcagtgatgactgaattagtttggcgccatttatcatctcctcg |
18805781 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
|||| | ||||| ||| | || |||| |||||||| | | ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
18805780 |
ttggcgatcctccatgactaccgcttgc---aatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttcca |
18805684 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| |
|
|
| T |
18805683 |
atatcccgacgagccaaaatcttcttaggatggaaac |
18805647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 28 - 349
Target Start/End: Original strand, 16781496 - 16781811
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||| | |||||||| || |||||| |||| ||||| |
|
|
| T |
16781496 |
ttgagcaagtgttgtttttccatatccacctaggccaacaatggaatagacagagagatcttcactattgctagcatgcctcagaagatactcaacaatt |
16781595 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
| ||||||||| ||||||||||||||| ||| | |||||||| | |||| |||||||| ||||| || |||||| || ||||||||||| ||| | |
|
|
| T |
16781596 |
tgttctttatctctgtctcttccatatactttggattcagtgatgacagaggtagtttgccgccactcttcatcttctggttggtgctcc---atgaccc |
16781692 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|||| || ||||| || | ||||||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
16781693 |
ccac---ctgcaatccgaacttcatcctttcttcagcaatatcatcgatctctttagcaatctccttcatcctctttccaatgttgcgacgagccaaaat |
16781789 |
T |
|
| Q |
328 |
cttcataggatggaaacaagtg |
349 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
16781790 |
cttcataggatggaaacgagtg |
16781811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 344
Target Start/End: Complemental strand, 18794273 - 18794078
Alignment:
| Q |
146 |
cttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtcccacttgttgaaatccaa |
245 |
Q |
| |
|
|||||||||| |||||||||||||| | | |||||||||||||||||||||||||||||||||||| | ||||| ||| | || |||| ||||||| |
|
|
| T |
18794273 |
cttccatatactttcggttcagtgacgactgaagtagtttggcgccattcatcatctcctcgttggcgatcctccatgactaccgcttgc---aatccaa |
18794177 |
T |
|
| Q |
246 |
aatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
| | | ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||| ||||||| |||| |
|
|
| T |
18794176 |
acttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttccaatattcctacgagccaaaatcttcttaggatgtaaac |
18794078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 18870443 - 18870164
Alignment:
| Q |
62 |
ccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcg |
161 |
Q |
| |
|
|||||||||||||||| || |||||||||||| ||| |||||| ||||| |||||||| | || |||||| |||| ||||||||||| | ||| | |
|
|
| T |
18870443 |
ccaacaatggaatagaaagagagttcttcactgtcaagagcatgacttagcagaaactcaaaaactttctctctatcacgatctcttccataaacttttg |
18870344 |
T |
|
| Q |
162 |
gttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttcttt |
261 |
Q |
| |
|
||||||||| | |||||||||||||||| ||||||| ||||||||||| | ||||| ||| | |||||||| ||||| || | | ||||||||| |
|
|
| T |
18870343 |
gttcagtgacgacagaagtagtttggcgattttcatcaactcctcgttggcgatcctccatgactaccacttgt---aatcctaatttgatcctttcttc |
18870247 |
T |
|
| Q |
262 |
agcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||||| || |||||||||||| |
|
|
| T |
18870246 |
agcaataacatcaatctttttagcaacctccttcatcctctttccaatatccctacgagccaaaatcatcttaggatggaaac |
18870164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 384
Target Start/End: Original strand, 16788356 - 16788718
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||| | ||| ||| ||| ||||| |||||| ||||||| |
|
|
| T |
16788356 |
ttgagcaagtgttgtttttccatattcacctaggccaacaatggaatagacagagagttcttctttgtcagtagtatgctttagaggaaactttacaatc |
16788455 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
| |||||||| | ||| |||||||||| | ||||| |||| | ||||||||||||||||||| |||||| | |||||||| |||| ||||| | || |
|
|
| T |
16788456 |
tgctctttatatatgtaccttccatatactacaggttcggtgacgacagaagtagtttggcgccactcatcagcacctcgttgacgctcttctgttactc |
16788555 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|||| ||| |||||| | | |||| |||||||||||| | ||||||||||||||||| ||||||||||||| |||| | ||| |||||||||| |
|
|
| T |
16788556 |
ccac---ttgcaatccatacttcatcctgtctttagcaataacgtcaatctttttagcaaccgccttcatcctctttccaacgtcacgctgagccaaaat |
16788652 |
T |
|
| Q |
328 |
cttcataggatggaaa---------caagtgttgtctccatgtgcttttgaggttattgagcattc |
384 |
Q |
| |
|
|||| ||||| ||||| || |||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
16788653 |
cttcttaggaaggaaacgggtgatgcacttgttgtctccatgtgcttttgatgttattgaacattc |
16788718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 16844207 - 16844398
Alignment:
| Q |
11 |
tcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtctta |
110 |
Q |
| |
|
||||||||||| || ||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||| |||| | ||| ||||||| |||| |
|
|
| T |
16844207 |
tcatcattgaagaccagttgagcaagtgctgtctttccatatccaccatgaccaacaatggaatagacagagagtccttccttgtcaatagcatgcctta |
16844306 |
T |
|
| Q |
111 |
gaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatct |
202 |
Q |
| |
|
|||||||||| |||| ||| || ||||| | | ||||||| | || ||||| || | | |||||||||||||||||||||||||||| |
|
|
| T |
16844307 |
gaagaaactcaacaaccttttccttatcctcatttcttccaagaatttggggttcggtaatgaaagaagtagtttggcgccattcatcatct |
16844398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 344
Target Start/End: Complemental strand, 18587251 - 18587159
Alignment:
| Q |
252 |
tcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||||| || |||||||||||| |
|
|
| T |
18587251 |
tcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttccaatatccctacgagccaaaatcatcttaggatggaaac |
18587159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 5 - 349
Target Start/End: Original strand, 13217 - 13561
Alignment:
| Q |
5 |
acactttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcat |
104 |
Q |
| |
|
||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | |
|
|
| T |
13217 |
acactttcatcattgaagaccatttgagcaagtgttgtttttccatatccaccgtggccaacaatggaatagacagagagttcttcactctcactggcgt |
13316 |
T |
|
| Q |
105 |
gtcttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcc |
204 |
Q |
| |
|
| ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13317 |
gccttagcagaaactctacaatctgttctttatctttgtctcttccatatactttcggttcggtgacagcagaagtagtttggcgccattcatcatctcg |
13416 |
T |
|
| Q |
205 |
tcgttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttc |
304 |
Q |
| |
|
||||||| ||||||| |||| | | | |||||| ||||| || | ||||||||| ||||||| |||| |||||||||||||| |||||||||||||| |
|
|
| T |
13417 |
tcgttggcgctcctccgtgactgcaaattgttgtaatccgaacttcatcctttcttcagcaatatcatcgatctttttagcaacctccttcatcctcttt |
13516 |
T |
|
| Q |
305 |
ccaatattacgacgagccaaaatcttcataggatggaaacaagtg |
349 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13517 |
ccaatgttgcgacgagccaaaatcttcataggatggaaacgagtg |
13561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 8 - 349
Target Start/End: Original strand, 8878 - 9213
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||| || | |
|
|
| T |
8878 |
ctttcatcattgaagactgtttgagcaagtgttgtttttccatatccaccgtggccaacaatagaatagacagagagttcttcactgtcaccagcgtgcc |
8977 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||| ||| | |||||||| | |||| |||||||| |||| | |||||| || | |
|
|
| T |
8978 |
gtagaagaaactctacaatatgctctttatctttgtctcttccatatactttggattcagtgatgacagaggtagtttgccgccgcccttcatcttctgg |
9077 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
|||| | ||| ||| ||||| ||| ||||| || | ||||||||| ||||||| | || |||| |||||||| |||||||||||||| ||| |
|
|
| T |
9078 |
ttggcg---ctcgatgacccccacatgt---aatccgaacttcatcctttcttcagcaatatcgtcgatctctttagcaatctccttcatcctctttcca |
9171 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaacaagtg |
349 |
Q |
| |
|
|| || |||||| |||||||||||||||||||||||| |||| |
|
|
| T |
9172 |
atgttgcgacgaaccaaaatcttcataggatggaaacgagtg |
9213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 28 - 344
Target Start/End: Complemental strand, 7053030 - 7052717
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||||||||| ||||| || |||||||||||| ||||||||||| || ||||||||||| |||||| |
|
|
| T |
7053030 |
ttgagcaagtgttgtttttccatatccactgtggccaacaatgggatagatagagagttcttcactgtcactagcatgcctcagaagaaactcgacaatc |
7052931 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| || |||||||| ||| || |
|
|
| T |
7052930 |
ttctctttatctttgtctcttccatataccacaacttcagtgatgacagaagtagtttggcgccattcatcatctcctcgctgacgctcctctatgactc |
7052831 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|||||||| |||||||| | | ||||||||| ||||||| ||||||||||||||||||| || ||||||||||| ||||| | ||| ||||||||||| |
|
|
| T |
7052830 |
ccacttgt---aatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctctttcatcctctttccaatgtcacgccgagccaaaat |
7052734 |
T |
|
| Q |
328 |
cttcataggatggaaac |
344 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
7052733 |
cttcttaggatggaaac |
7052717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 28 - 386
Target Start/End: Complemental strand, 38939123 - 38938762
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||| |||||||| | ||||||| || |||||| |||| ||||| |
|
|
| T |
38939123 |
ttgagcaagtgttgtttttccatatccacctagaccaacaatggaatagacagagagatcttcactgttgttagcatgcctcagaagatactcaacaatt |
38939024 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
| ||||||||||||||||||||||||| || | |||||||| | |||| ||||||| ||||| || |||||| || ||||| ||||| ||| | |
|
|
| T |
38939023 |
tgttctttatctttgtctcttccatatacttcggattcagtgatgacagaggtagttttccgccactcttcatcttctggttggcgctcc---atgaccc |
38938927 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|||||||| ||||| || | ||||||||| ||||||| |||| |||||||||||||| |||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
38938926 |
ccacttgt---aatccgaacttcatcctttcttcagcaatatcatcgatctttttagcaacctccttcatcctctttccaatgttgcgacgagccaaaat |
38938830 |
T |
|
| Q |
328 |
cttcataggatggaaacaag---------tgttgtctccatgtgcttttgaggttattgagcattcat |
386 |
Q |
| |
|
||||| ||||||||||| || ||||||| |||||||||||| |||||||||| ||||||| |
|
|
| T |
38938829 |
cttcagaggatggaaacgagtgatccacttgttgtcgccatgtgcttttaaggttattgaacattcat |
38938762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 156; Significance: 9e-83; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 8 - 349
Target Start/End: Original strand, 37858 - 38196
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||| | || ||||||| |||| ||||||||| | ||| || |||||||||||| ||||| |||||||||||| || || |||| |
|
|
| T |
37858 |
ctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaacaccaacaatggaacagacaaagagttcttcactttcgctggcat--- |
37954 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| | |||| |||||||||||||||||||||||||||| |
|
|
| T |
37955 |
ttagaagaaactctacaatctgttctttatctttgtctcttccatatactttcggttcggtgacagtagaaatagtttggcgccattcatcatctcctcg |
38054 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
||| |||||||| |||| ||||||| ||||||||||||| | ||||||||||| ||||||| |||||||| |||||||||| |||||||||||||| ||| |
|
|
| T |
38055 |
ttgatgctcctccgtgactcccactcgttgaaatccaaatttgttcctttcttcagcaatatcatcaatccttttagcaacctccttcatcctctttcca |
38154 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaacaagtg |
349 |
Q |
| |
|
|| || |||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
38155 |
atgttgcgacaagccaaaatcttcacaggatggaaactagtg |
38196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 8 - 344
Target Start/End: Original strand, 9730 - 10063
Alignment:
| Q |
8 |
ctttcatcattgaaaactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtc |
107 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||||| | ||||| ||||||||||||||||| | |||||||||||| || | |||| | |
|
|
| T |
9730 |
ctttcatcattgaacaccacttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacngagagttcttcactatccacaacatgac |
9829 |
T |
|
| Q |
108 |
ttagaagaaactctacaatcttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcg |
207 |
Q |
| |
|
||||||||||||| |||| | |||| | || |||||||||||||| |||||||||||||| | | |||||||||||||||||||||||||||||||| |
|
|
| T |
9830 |
ttagaagaaactcaacaacttgctctctgtcacggtctcttccatatactttcggttcagtgacgactgaagtagtttggcgccattcatcatctcctcg |
9929 |
T |
|
| Q |
208 |
ttggtgctcctctgtgagtcccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttccca |
307 |
Q |
| |
|
|||| | ||||| ||| | || |||| |||||||| | | ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
9930 |
ttggcgatcctccatgactaccgcttgc---aatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttcca |
10026 |
T |
|
| Q |
308 |
atattacgacgagccaaaatcttcataggatggaaac |
344 |
Q |
| |
|
|||| | |||||||||||||||| ||||||| |||| |
|
|
| T |
10027 |
atatgccaacgagccaaaatcttcttaggatgaaaac |
10063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 28 - 386
Target Start/End: Original strand, 9541 - 9902
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||| | |||||||| || |||||| |||| ||||| |
|
|
| T |
9541 |
ttgagcaagtgttgtttttccatatccacctaggccaacaatggaatagacagagagatcttcactgttgctagcatgcctcagaagatactcaacaatt |
9640 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
|| ||||||||||||||||||||| ||| | | | |||||||| | || |||||||| ||||| || |||||| || ||||||||||| ||| | |
|
|
| T |
9641 |
ttttctttatctttgtctcttccaaatactatggattcagtgatgaaggaggtagtttgccgccactcttcatcttctggttggtgctcc---atgaccc |
9737 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|||| ||| ||||| || | ||||||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
9738 |
ccacctgt---aatccgaacttcatcctttcttcagcaatatcatcaatctctttagcaatctccttcatcctctttccaatgttgcgacgagccaaaat |
9834 |
T |
|
| Q |
328 |
cttcataggatggaaacaag---------tgttgtctccatgtgcttttgaggttattgagcattcat |
386 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||||||| |||||||||| ||||||| |
|
|
| T |
9835 |
cttcataggatggaaacgagtgatccgcttgttgtcgccatgtgcttttaaggttattgaacattcat |
9902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 28 - 344
Target Start/End: Original strand, 5070 - 5383
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| ||||||||| | ||||| ||||||||||||||||||| |||||||||||| || |||||| |||||||||||||| |||| |
|
|
| T |
5070 |
ttgagcaagtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcactatcgacagcatgacttagaagaaactcaacaact |
5169 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
| |||| | || ||||||||||||| |||||||||||||| | ||||| |||||||||||||| |||||||||||||||| | || || ||| | |
|
|
| T |
5170 |
tgctctctgtcacgatctcttccatatactttcggttcagtgacgacagaaaaagtttggcgccatttatcatctcctcgttggcgatcttccatgacta |
5269 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|| ||||| |||||||| | | ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||| |
|
|
| T |
5270 |
ccgcttgt---aatccaaacttgatcctttcttcagcaataacatcaatctttttagcaacctccttcatcctctttccaatatccctacgagccaaaat |
5366 |
T |
|
| Q |
328 |
cttcataggatggaaac |
344 |
Q |
| |
|
| || |||||||||||| |
|
|
| T |
5367 |
catcttaggatggaaac |
5383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 28 - 349
Target Start/End: Original strand, 13378488 - 13378803
Alignment:
| Q |
28 |
ttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatc |
127 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| || | ||| |||| ||||||||| |||| ||||| |
|
|
| T |
13378488 |
ttgagcaagtgttgtttttccatatccacctaggccaacaatggaatagacagagatatcttctctgttacttgcatcccttagaagatactcaacaatt |
13378587 |
T |
|
| Q |
128 |
ttctctttatctttgtctcttccatatagtttcggttcagtgagggcagaagtagtttggcgccattcatcatctcctcgttggtgctcctctgtgagtc |
227 |
Q |
| |
|
| ||||||||||||||||||||||||| ||| | || ||||| | |||||||||||||||||| || ||| || || | |||||| ||| || |
|
|
| T |
13378588 |
tgttctttatctttgtctcttccatatactttggatttagtgatgatagaagtagtttggcgccactccatgtcttctggtagatgctcc---atgactc |
13378684 |
T |
|
| Q |
228 |
ccacttgttgaaatccaaaatcgttcctttctttagcaatagcatcaatctttttagcaacttccttcatcctcttcccaatattacgacgagccaaaat |
327 |
Q |
| |
|
|||| ||| |||||||| | | ||| |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||| || ||||||||||| |
|
|
| T |
13378685 |
ccacatgt---aatccaaacttgatccggtcttcagcaataacatcaatctttttagcaacctctttcatcctctttccaatacctcggcgagccaaaat |
13378781 |
T |
|
| Q |
328 |
cttcataggatggaaacaagtg |
349 |
Q |
| |
|
|||| |||||||||||| |||| |
|
|
| T |
13378782 |
cttcttaggatggaaacgagtg |
13378803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 30712428 - 30712388
Alignment:
| Q |
110 |
agaagaaactctacaatcttctctttatctttgtctcttcc |
150 |
Q |
| |
|
||||||||||| |||||||| |||||||| ||||||||||| |
|
|
| T |
30712428 |
agaagaaactcgacaatcttttctttatcattgtctcttcc |
30712388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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